Myot (myotilin) - Rat Genome Database

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Gene: Myot (myotilin) Rattus norvegicus
Analyze
Symbol: Myot (Ensembl: LOC100912306)
Name: myotilin (Ensembl:myotilin-like)
RGD ID: 1310569
Description: Predicted to enable alpha-actinin binding activity and cell-cell adhesion mediator activity. Predicted to be involved in axon guidance; dendrite self-avoidance; and homophilic cell adhesion via plasma membrane adhesion molecules. Predicted to be located in Z disc. Predicted to be active in axon and plasma membrane. Human ortholog(s) of this gene implicated in muscular dystrophy and myofibrillar myopathy 3. Orthologous to human MYOT (myotilin); INTERACTS WITH acrylamide; bisphenol A; dibutyl phthalate.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: LOC100909761; LOC291605; myotilin-like; titin immunoglobulin domain protein (myotilin); Ttid
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81836,956,119 - 36,975,728 (+)NCBIGRCr8
mRatBN7.21836,705,244 - 36,724,849 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1836,705,314 - 36,724,841 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1836,809,300 - 36,828,821 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01837,527,651 - 37,547,177 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01836,904,570 - 36,924,088 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01835,573,978 - 35,593,541 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1835,574,002 - 35,593,541 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0 Ensembl937,727,942 - 37,747,514 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01835,239,617 - 35,259,164 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41838,004,000 - 38,023,531 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Cytogenetic Map18q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
axon  (IBA)
plasma membrane  (IBA)
Z disc  (ISO)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Myotilin is mutated in limb girdle muscular dystrophy 1A. Hauser MA, etal., Hum Mol Genet. 2000 Sep 1;9(14):2141-7.
3. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
4. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
6. Comprehensive gene review and curation RGD comprehensive gene curation
Additional References at PubMed
PMID:19047374  


Genomics

Comparative Map Data
Myot
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81836,956,119 - 36,975,728 (+)NCBIGRCr8
mRatBN7.21836,705,244 - 36,724,849 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1836,705,314 - 36,724,841 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1836,809,300 - 36,828,821 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01837,527,651 - 37,547,177 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01836,904,570 - 36,924,088 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01835,573,978 - 35,593,541 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1835,574,002 - 35,593,541 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0 Ensembl937,727,942 - 37,747,514 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01835,239,617 - 35,259,164 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41838,004,000 - 38,023,531 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Cytogenetic Map18q11NCBI
MYOT
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh385137,867,860 - 137,887,851 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl5137,867,858 - 137,887,851 (+)EnsemblGRCh38hg38GRCh38
GRCh375137,203,549 - 137,223,540 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 365137,231,473 - 137,251,440 (+)NCBINCBI36Build 36hg18NCBI36
Build 345137,231,472 - 137,251,440NCBI
Celera5133,325,839 - 133,345,837 (+)NCBICelera
Cytogenetic Map5q31.2NCBI
HuRef5132,395,358 - 132,415,358 (+)NCBIHuRef
CHM1_15136,636,150 - 136,656,170 (+)NCBICHM1_1
T2T-CHM13v2.05138,394,286 - 138,414,287 (+)NCBIT2T-CHM13v2.0
Myot
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391844,467,126 - 44,488,795 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1844,467,141 - 44,488,791 (+)EnsemblGRCm39 Ensembl
GRCm381844,334,053 - 44,355,740 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1844,334,074 - 44,355,724 (+)EnsemblGRCm38mm10GRCm38
MGSCv371844,493,728 - 44,515,376 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361844,459,405 - 44,481,053 (+)NCBIMGSCv36mm8
Celera1845,713,780 - 45,735,414 (+)NCBICelera
Cytogenetic Map18B3NCBI
cM Map1823.74NCBI
Myot
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540832,790,095 - 32,838,258 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495540832,816,133 - 32,835,230 (+)NCBIChiLan1.0ChiLan1.0
MYOT
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v24133,143,300 - 133,170,336 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan15131,282,853 - 131,309,897 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v05133,254,644 - 133,274,615 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.15139,386,101 - 139,411,960 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl5139,386,101 - 139,411,960 (+)Ensemblpanpan1.1panPan2
MYOT
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11125,574,087 - 25,592,767 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1125,564,136 - 25,592,339 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1124,338,045 - 24,356,731 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01126,424,036 - 26,442,735 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1126,424,113 - 26,442,730 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11125,131,713 - 25,150,406 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01124,955,437 - 24,974,114 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01125,618,123 - 25,636,808 (+)NCBIUU_Cfam_GSD_1.0
Myot
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213125,805,178 - 125,822,515 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365974,830,027 - 4,847,421 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365974,830,111 - 4,847,409 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MYOT
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl2139,861,004 - 139,919,089 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.12139,899,245 - 139,919,095 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.22145,621,343 - 145,642,087 (+)NCBISscrofa10.2Sscrofa10.2susScr3
MYOT
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12340,542,153 - 40,567,873 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2340,548,100 - 40,568,217 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603437,323,439 - 37,340,122 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Myot
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247339,130,399 - 9,160,908 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247339,131,051 - 9,160,813 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Myot
57 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:274
Count of miRNA genes:168
Interacting mature miRNAs:187
Transcripts:ENSRNOT00000016511, ENSRNOT00000070817, ENSRNOT00000074276
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
9589153Insul31Insulin level QTL 317.150.05blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)18142547119Rat
2299160Iddm35Insulin dependent diabetes mellitus QTL 352.79blood glucose amount (VT:0000188)age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)18420794160377792Rat
2312568Glom21Glomerulus QTL 2120.005kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)18518585840503530Rat
2293708Bss46Bone structure and strength QTL 468.80.0001lumbar vertebra morphology trait (VT:0010494)lumbar vertebra cortical cross-sectional area (CMO:0001690)181179151863636873Rat
1578661Bss20Bone structure and strength QTL 203.7femur morphology trait (VT:0000559)femoral neck cross-sectional area (CMO:0001697)181179151883218561Rat
1578667Bss21Bone structure and strength QTL 213.5femur morphology trait (VT:0000559)femoral neck cortical cross-sectional area (CMO:0001702)181179151883218561Rat
61375Bp41Blood pressure QTL 412.4blood pressure trait (VT:0000183)systolic blood pressure (CMO:0000004)181194429941122201Rat
1331753Bp231Blood pressure QTL 2313.643arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)181194429952293055Rat
1358358Sradr6Stress Responsive Adrenal Weight QTL 62.49adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)181194429959330563Rat
6903359Bp355Blood pressure QTL 3553.6arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)181194454459796478Rat
2313082Bss85Bone structure and strength QTL 850.80.0001long bone metaphysis morphology trait (VT:0000133)tibia midshaft total cross-sectional area (CMO:0001715)181495133759951337Rat
1358193Emca2Estrogen-induced mammary cancer QTL 21.6mammary gland integrity trait (VT:0010552)post-insult time to mammary tumor formation (CMO:0000345)181800759963571040Rat
1600373Mamtr6Mammary tumor resistance QTL 6mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)181927890183218561Rat
1331741Bp232Blood pressure QTL 2323.59112arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)182137289383213037Rat
1641923Colcr8Colorectal carcinoma resistance QTL 83.10.0014intestine integrity trait (VT:0010554)poorly differentiated malignant colorectal tumor number (CMO:0002076)182206624252293055Rat
1331733Bp233Blood pressure QTL 2333.97196arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)182479697779788953Rat
2325839Bp348Blood pressure QTL 3480.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)182557098570570985Rat
12904673Cm127Cardiac mass QTL 1270.005heart right ventricle mass (VT:0007033)heart right ventricle weight to body weight ratio (CMO:0000914)182654808246969551Rat
12904675Am19Aortic mass QTL 190.001aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)182654808246969551Rat
12904677Kidm72Kidney mass QTL 720.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)182654808246969551Rat
12904668Bw188Body weight QTL 1880.03body mass (VT:0001259)body weight (CMO:0000012)182654808246969551Rat
12904669Cm125Cardiac mass QTL 1250.001heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)182654808246969551Rat
12904670Cm126Cardiac mass QTL 1260.001heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)182654808246969551Rat
2301413Bp318Blood pressure QTL 3180.002arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)182654808246969551Rat
2293704Bss35Bone structure and strength QTL 354.590.0002femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)182896485373964853Rat
2300157Bmd66Bone mineral density QTL 6613.10.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)182896485373964853Rat
2300177Bmd65Bone mineral density QTL 6519.70.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)182896485373964853Rat
9589816Gluco68Glucose level QTL 687.250.001blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)182979296574792965Rat
8694378Bw157Body weight QTL 1573.590.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)182979296574792965Rat
9590318Scort22Serum corticosterone level QTL 227.640.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)182979296574792965Rat
1331754Bp230Blood pressure QTL 2304.61609arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)182979296574792965Rat
738005Anxrr11Anxiety related response QTL 113.4exploratory behavior trait (VT:0010471)number of entries into a discrete space in an experimental apparatus (CMO:0000960)183003981375039813Rat
61383Bp47Blood pressure QTL 4717.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)183127168160377755Rat
1331742Bp228Blood pressure QTL 2283.88752arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)183135940859796643Rat
1331774Bp226Blood pressure QTL 2264.41065arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)183135940859796643Rat
1331776Bp225Blood pressure QTL 2252.829arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)183135940859796643Rat
1331798Bp224Blood pressure QTL 2243.53873arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)183135940859796643Rat
1331727Bp237Blood pressure QTL 2373.053arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)183135940861698465Rat
61429Cia17Collagen induced arthritis QTL 174.6joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)183135940870263868Rat
2303120Mamtr8Mammary tumor resistance QTL 80.001mammary gland integrity trait (VT:0010552)mammary tumor growth rate (CMO:0000344)183135940883218561Rat
6903347Bp350Blood pressure QTL 3504.4arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)183135953059796478Rat
631274Sprol1Serum protein level QTL 15.3blood total protein amount (VT:0005567)serum total protein level (CMO:0000661)183139332077209694Rat
631518Bw11Body weight QTL 112.8body mass (VT:0001259)body weight (CMO:0000012)183587072380870723Rat

Markers in Region
RH131870  
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_5.01835,258,730 - 35,258,910NCBIRnor5.0
Rnor_5.0936,550,983 - 36,551,163NCBIRnor5.0
Rnor_5.01877,723,174 - 77,723,354NCBIRnor5.0
Rnor_5.01877,736,706 - 77,736,886NCBIRnor5.0
RGSC_v3.41838,023,106 - 38,023,285UniSTSRGSC3.4
Cytogenetic Map18q11UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

circulatory system integumental system musculoskeletal system reproductive system respiratory system appendage
High
Medium 6 8 6
Low 2 4 4 2
Below cutoff 3 1 3

Sequence


RefSeq Acc Id: ENSRNOT00000070817   ⟹   ENSRNOP00000066839
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1836,705,314 - 36,724,841 (+)Ensembl
Rnor_6.0 Ensembl1835,574,003 - 35,593,533 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000093356   ⟹   ENSRNOP00000076325
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl1835,574,052 - 35,581,523 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000093442   ⟹   ENSRNOP00000076167
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl1835,574,002 - 35,593,541 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000093688
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl1835,582,341 - 35,593,541 (+)Ensembl
RefSeq Acc Id: NM_001106148   ⟹   NP_001099618
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81836,956,191 - 36,975,722 (+)NCBI
mRatBN7.21836,705,314 - 36,724,841 (+)NCBI
Rnor_6.01835,574,003 - 35,593,533 (+)NCBI
Rnor_5.01835,239,617 - 35,259,164 (+)NCBI
RGSC_v3.41838,004,000 - 38,023,531 (+)RGD
Sequence:
RefSeq Acc Id: XM_006254666   ⟹   XP_006254728
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81836,956,119 - 36,975,728 (+)NCBI
mRatBN7.21836,705,244 - 36,724,849 (+)NCBI
Rnor_6.01835,573,978 - 35,593,539 (+)NCBI
Rnor_5.01835,239,617 - 35,259,164 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006254667   ⟹   XP_006254729
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81836,956,125 - 36,975,728 (+)NCBI
mRatBN7.21836,705,247 - 36,724,849 (+)NCBI
Rnor_6.01835,573,978 - 35,593,539 (+)NCBI
Rnor_5.01835,239,617 - 35,259,164 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006254668   ⟹   XP_006254730
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81836,956,119 - 36,975,728 (+)NCBI
mRatBN7.21836,705,244 - 36,724,849 (+)NCBI
Rnor_6.01835,573,979 - 35,593,541 (+)NCBI
Rnor_5.01835,239,617 - 35,259,164 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001099618 (Get FASTA)   NCBI Sequence Viewer  
  XP_006254728 (Get FASTA)   NCBI Sequence Viewer  
  XP_006254729 (Get FASTA)   NCBI Sequence Viewer  
  XP_006254730 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EDL84754 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000066839
  ENSRNOP00000066839.2
RefSeq Acc Id: NP_001099618   ⟸   NM_001106148
- UniProtKB: A6KUC3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006254729   ⟸   XM_006254667
- Peptide Label: isoform X1
- UniProtKB: M0RCF7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006254728   ⟸   XM_006254666
- Peptide Label: isoform X1
- UniProtKB: M0RCF7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006254730   ⟸   XM_006254668
- Peptide Label: isoform X2
- UniProtKB: A6KUC3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000066839   ⟸   ENSRNOT00000070817
RefSeq Acc Id: ENSRNOP00000076325   ⟸   ENSRNOT00000093356
RefSeq Acc Id: ENSRNOP00000076167   ⟸   ENSRNOT00000093442
Protein Domains
Ig-like

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-M0RCF7-F1-model_v2 AlphaFold M0RCF7 1-497 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1310569 AgrOrtholog
BioCyc Gene G2FUF-7663 BioCyc
Ensembl Genes ENSRNOG00000047186 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSRNOG00000050004 Ensembl
Ensembl Transcript ENSRNOT00000070817.3 UniProtKB/TrEMBL
Gene3D-CATH 2.60.40.10 UniProtKB/TrEMBL
InterPro Basigin-like UniProtKB/TrEMBL
  Ig-like UniProtKB/TrEMBL
  Ig-like_dom_sf UniProtKB/TrEMBL
  Ig-like_fold UniProtKB/TrEMBL
  Ig_I-set UniProtKB/TrEMBL
  Ig_sub UniProtKB/TrEMBL
  Ig_sub2 UniProtKB/TrEMBL
KEGG Report rno:291605 UniProtKB/TrEMBL
NCBI Gene 291605 ENTREZGENE
PANTHER BASIGIN RELATED UniProtKB/TrEMBL
  MYOTILIN UniProtKB/TrEMBL
Pfam I-set UniProtKB/TrEMBL
PhenoGen Myot PhenoGen
PROSITE IG_LIKE UniProtKB/TrEMBL
RatGTEx ENSRNOG00000047186 RatGTEx
  ENSRNOG00000050004 RatGTEx
SMART IGc2 UniProtKB/TrEMBL
  SM00409 UniProtKB/TrEMBL
Superfamily-SCOP SSF48726 UniProtKB/TrEMBL
UniProt A6KUC3 ENTREZGENE, UniProtKB/TrEMBL
  M0RCF7 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-03-09 Myot  myotilin  LOC100909761  myotilin-like  Data merged from RGD:6502123 737654 PROVISIONAL
2012-07-05 LOC100909761  myotilin-like      Symbol and Name status set to provisional 70820 PROVISIONAL
2008-04-30 Myot  myotilin   Myot_predicted  myotilin (predicted)  'predicted' is removed 2292626 APPROVED
2006-03-30 Myot_predicted  myotilin (predicted)  Ttid_predicted  titin immunoglobulin domain protein (myotilin) (predicted)  Symbol and Name updated 1299863 APPROVED
2005-01-12 Ttid_predicted  titin immunoglobulin domain protein (myotilin) (predicted)      Symbol and Name status set to approved 70820 APPROVED