Bmd67 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL: Bmd67 (Bone mineral density QTL 67) Rattus norvegicus

Symbol: Bmd67
Name: Bone mineral density QTL 67
RGD ID: 2300180
Trait: femur mineral mass   (VT:0010011)    
Measurement Type: bone mineral density   (CMO:0001226)    
LOD Score: 4.8
P Value: 1.0E-4
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2181 - 34,291,613RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0181 - 38,195,967RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0181 - 37,966,407RGDRnor5.0
RGSC_v3.4181 - 34,745,192RGDRGSC3.4
Cross Type: intercross
Strains Crossed: COP/OlaHsd DA/OlaHsd 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View
osteoporosis  (IAGP)

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain
COP/OlaHsd  (IEA)
DA/OlaHsd  (IEA)

References

References - curated
1. Koller DL, etal., J Bone Miner Res. 2008 Sep;23(9):1382-8.
2. Koller DL, etal., Mamm Genome. 2009 Jan 20.
Related QTLs

Related QTL Description Reference
Bmd62 interacts with RGD:2303105


Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
3916Ttrtransthyretin181194179111951008Rat
619977Hdac3histone deacetylase 3182977063729789850Rat
2544Egr1early growth response 1182646333326465531Rat
2741Nr3c1nuclear receptor subfamily 3, group C, member 1183127168131393320Rat
3266Pcdhb12protocadherin beta 12182913974629142764Rat
71046B4galt6beta-1,4-galactosyltransferase 6181195838212015247Rat
2605Fgf1fibroblast growth factor 1183068655530772667Rat
3411Procprotein C, inactivator of coagulation factors Va and VIIIa182376436723774816Rat
2264Camk4calcium/calmodulin-dependent protein kinase IV182458298824811918Rat
69280Cdh2cadherin 21877767047990934Rat
2666Gata6GATA binding protein 61821881212219532Rat
619917Pcdh12protocadherin 12183010372830119307Rat
628792Slc35a4solute carrier family 35, member A4182828048328284610Rat
628811Slc4a9solute carrier family 4 member 9182812874028144554Rat
727845F8coagulation factor VIII18140848172330Rat
620853Apbb3amyloid beta precursor protein binding family B member 3182827316828280347Rat
2526Hbegfheparin-binding EGF-like growth factor182810628428116167Rat
631411Nrepneuronal regeneration related protein182501706925046564Rat
620899Pik3c3phosphatidylinositol 3-kinase, catalytic subunit type 3182184528221934387Rat
621566Kctd1potassium channel tetramerization domain containing 11861223906316434Rat
3081Mep1bmeprin A subunit beta181236612612392840Rat
708414Vom2r75vomeronasal 2 receptor, 75187019499837Rat
628693Npc1NPC intracellular cholesterol transporter 11833794823425100Rat
620746Pcdhgc3protocadherin gamma subfamily C, 3182963301629667865Rat
620725Pcdhga4protocadherin gamma subfamily A, 4182950815229543103Rat
620729Pcdhga9protocadherin gamma subfamily A, 9182956461429667865Rat
735029Dele1DAP3 binding cell death enhancer 1183008509330098105Rat
619875Slc23a1solute carrier family 23 member 1182721494027230564Rat
621232Pcdhga11protocadherin gamma subfamily A, 11182958337329667865Rat
620967Map3k2mitogen activated protein kinase kinase kinase 2182380721823879722Rat
628888Osbpl1aoxysterol binding protein-like 1A1839040064094635Rat
620502Gfra3GDNF family receptor alpha 3182629782826326105Rat
727963Zfp24zinc finger protein 24181529568715307319Rat
621485Rnf138ring finger protein 138181229155712315931Rat
620424Rock1Rho-associated coiled-coil containing protein kinase 11811145321236345Rat
1304665Pcdhb5protocadherin beta 5182902431529032183Rat
628776Lama3laminin subunit alpha 31835231683751722Rat
620358Galnt1polypeptide N-acetylgalactosaminyltransferase 1181548901515568849Rat
1304664Slc39a6solute carrier family 39 member 6181586487415885417Rat
2143Aqp4aquaporin 41865079036524558Rat
1305171Pcdhb3protocadherin beta 3182901166729014221Rat
1304938Arap3ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3182980621429834217Rat
620588Cd14CD14 molecule182833552228337383Rat
1304819Cdc23cell division cycle 23182623689126260611Rat
620246Cetn1centrin 118651591652293Rat
3052Matr3matrin 3182715409827193212Rat
620631Hrh4histamine receptor H41841662704182426Rat
620337Pcdha4protocadherin alpha 4182858104028846214Rat
621786Bin1bridging integrator 1182400973124067267Rat
621148Sra1steroid receptor RNA activator 1182826919228273023Rat
68397Syt4synaptotagmin 4182303697323046380Rat
735039Colec12collectin sub-family member 1218732950920620Rat
735103Sil1SIL1 nucleotide exchange factor182687242327104365Rat
1306312Wnt8aWnt family member 8A182613769026143283Rat
1307345Zfp521zinc finger protein 5211847759525068592Rat
1305640Wdr55WD repeat domain 55182837532128378834Rat
1306047Reep5receptor accessory protein 5182594537525983271Rat
1305108Pcdhga7protocadherin gamma subfamily A, 7182954301829667865Rat
1306345Snrpd1small nuclear ribonucleoprotein D1 polypeptide1816968381707400Rat
1306123Pcdhb6protocadherin beta 6182904638329049745Rat
1307003Brd8bromodomain containing 8182618174426230035Rat
1305072Slc25a46solute carrier family 25, member 46182321595423244917Rat
1305712Etf1eukaryotic translation termination factor 1182650241326530753Rat
1306419Elp2elongator acetyltransferase complex subunit 2181588594015921564Rat
1309935Taf7TATA-box binding protein associated factor 7182945993729462086Rat
1307591Pcdhb14protocadherin beta 14182915633629164056Rat
1308565Polr2dRNA polymerase II subunit D182341809723425228Rat
1304962Lars1leucyl-tRNA synthetase 1183420155534256003Rat
1307374Rprd1aregulation of nuclear pre-mRNA domain containing 1A181579141815839338Rat
1310655Abhd3abhydrolase domain containing 3, phospholipase1817232031778488Rat
1307195Mib1MIB E3 ubiquitin protein ligase 11818025191926988Rat
1306034Epb41l4aerythrocyte membrane protein band 4.1 like 4A182540546125615392Rat
1305349Pcdhb21protocadherin beta 21182921543429229138Rat
1304762Iws1interacts with SUPT6H, CTD assembly factor 1182369549623737363Rat
1305869Asxl3ASXL transcriptional regulator 3181359352913766324Rat
1307432Pcdhgb8protocadherin gamma subfamily B, 8182958832729667865Rat
1306095Zscan30zinc finger and SCAN domain containing 30181524514015266204Rat
1306757Rnf125ring finger protein 125181225406612275719Rat
1305603Pfdn1prefoldin subunit 1182801414528067148Rat
1310199Ino80cINO80 complex subunit C181537876415398574Rat
1308415Sh3rf2SH3 domain containing ring finger 2183404571534148342Rat
1308426Hars2histidyl-tRNA synthetase 2, mitochondrial182839879028408075Rat
1308437Srp19signal recognition particle 19182593173425937974Rat
1310759Pabpc2poly(A) binding protein, cytoplasmic 2183165421831656486Rat
1359352IkIK cytokine182835800428372809Rat
1311875Cdc25ccell division cycle 25C182633515626356199Rat
1311075Psd2pleckstrin and Sec7 domain containing 2182756491227616674Rat
1310833Riok3RIO kinase 31833277763353350Rat
1310707Diaph1diaphanous-related formin 1182966965929769044Rat
1311143Dsg2desmoglein 2181184620711904630Rat
1310923Arhgap26Rho GTPase activating protein 26183083580631237945Rat
1311782Dsc3desmocollin 3181137975911413797Rat
1310768Dsc1desmocollin 1181149993611556801Rat
1312031Zfp35zinc finger protein 35181526885215284334Rat
1311966Rbm27RNA binding motif protein 27183427352734336124Rat
1308364Pcdhb10protocadherin beta 10182911360229123201Rat
1311742Spata24spermatogenesis associated 24182724904727257129Rat
1359165Yipf5Yip1 domain family, member 5183212381432159752Rat
1307915Ammecr1lAMMECR1 like182338611423411177Rat
1308657Thoc1THO complex 1189836061020379Rat
1311657Sap130Sin3A associated protein 130182324433723345368Rat
1311659Psma8proteasome 20S subunit alpha 81858635945928226Rat
1309422Pcdhb7protocadherin beta 7182905318329058498Rat
1309426Dsc2desmocollin 2181145039211482476Rat
1310251Mzb1marginal zone B and B1 cell-specific protein182723899927241060Rat
1549775Pcdhb17protocadherin beta 17182919492829200559Rat
1309263Tmco6transmembrane and coiled-coil domains 6182834924828355843Rat
1309475Stard4StAR-related lipid transfer domain containing 4182481468324830024Rat
1310695Hars1histidyl-tRNA synthetase 1182838164928398699Rat
1309925Dsg1desmoglein 1181167468711705383Rat
1307630Celf4CUGBP, Elav-like family member 4181678657817065045Rat
1309997Ndufa2NADH:ubiquinone oxidoreductase subunit A2182835577428357863Rat
1309608Pcdhb11protocadherin beta 11182912594629131135Rat
1308490Pcdh1protocadherin 1183001169230039679Rat
1308160Ccdc178coiled-coil domain containing 178181307483413472732Rat
1308240Fchsd1FCH and double SH3 domains 1182979389929804533Rat
1306569Mtmr1myotubularin related protein 118215031248541Rat
1308760Pcdhb1protocadherin beta 1182891273828916746Rat
1307139Ercc3ERCC excision repair 3, TFIIH core complex helicase subunit182388361323914326Rat
1309102Trappc8trafficking protein particle complex subunit 8181210387412180422Rat
735015Dsg4desmoglein 4181172097511756234Rat
1310237Dnajc18DnaJ heat shock protein family (Hsp40) member C18182726934527303471Rat
1305324Spry4sprouty RTK signaling antagonist 4183043651330451426Rat
1309230Wdr33WD repeat domain 33182343223323535460Rat
1310295Gypcglycophorin C (Gerbich blood group)182416073824193408Rat
1310272Pkd2l2polycystin 2 like 2, transient receptor potential cation channel182600778926042428Rat
1308289Pcdhga10protocadherin gamma subfamily A, 10182957469329667865Rat
2123ApcAPC regulator of WNT signaling pathway182582855825925511Rat
1307654Rit2Ras-like without CAAX 2182256540322921648Rat
1307302Chst9carbohydrate sulfotransferase 91865763916851078Rat
1308872Rbbp8RB binding protein 8, endonuclease1829229852988851Rat
1310663Nol4nucleolar protein 4181393249914294873Rat
1310667Slc25a2solute carrier family 25 member 2182945294329457906Rat
1310676Pcdhga8protocadherin gamma subfamily A, 8182955388229667865Rat
1308912Pcdhb4protocadherin beta 4182901828229020821Rat
1305273Lims2LIM zinc finger domain containing 2182355381323592137Rat
1305276Rell2RELT-like 2182978999629793986Rat
1309895Pcdhb8protocadherin beta 8182906546629067805Rat
1310571Tpgs2tubulin polyglutamylase complex subunit 2181643262816489604Rat
1308496Mocosmolybdenum cofactor sulfurase181593165415977415Rat
1305516Cables1Cdk5 and Abl enzyme substrate 11830765563181183Rat
1310053Ndfip1Nedd4 family interacting protein 1183026580830316068Rat
1307695Kif20akinesin family member 20A182623029426238780Rat
1559877RGD1559877similar to 60S ribosomal protein L29 (P23)181567142615671913Rat
1560482Pcdhgb1protocadherin gamma subfamily B, 1182950173929508024Rat
1562608RGD1562608similar to KIAA1328 protein181648856916776373Rat
1561764Sft2d3SFT2 domain containing 3182353710523539305Rat
1303302Nrg2neuregulin 2182761963527798505Rat
1562552Sting1stimulator of interferon response cGAMP interactor 1182733211927338371Rat
1564673MGC116121similar to RIKEN cDNA 2700062C07181577934915786772Rat
1311919Ss18SS18 subunit of BAF chromatin remodeling complex1857730425835696Rat
1562997Taf4bTATA-box binding protein associated factor 4b1859527376086408Rat
1563159RGD1563159RGD1563159182948047429481239Rat
1359485Ctnna1catenin alpha 1182672824626860911Rat
1560045LOC498826LRRGT00165181219476712207125Rat
1310484Fam13bfamily with sequence similarity 13, member B182604028526107112Rat
1560916Fundc2FUN14 domain containing 218128473138232Rat
1563066RGD1563066similar to Ac2-210182833082028332264Rat
1562371Greb1lGREB1 like retinoic acid receptor coactivator1813923301629483Rat
1549697Pcdhb19protocadherin beta 19182920318829207632Rat
1559856Kctd16potassium channel tetramerization domain containing 16183216623632473067Rat
1564026RGD1564026similar to L-lactate dehydrogenase A chain (LDH-A) (LDH muscle subunit) (LDH-M)182173890921739826Rat
1311949Pcdhga5protocadherin gamma subfamily A, 5182951970529667865Rat
1564290Ubbp4ubiquitin B pseudogene 4182424283624243530Rat
1311825Usp14ubiquitin specific peptidase 141810181111057727Rat
1311805Rmc1regulator of MON1-CCZ11833598483379764Rat
1311806Hspa9heat shock protein family A (Hsp70) member 9182653613126554294Rat
1359176Paip2poly(A) binding protein interacting protein 2182719976227218359Rat
1585827LOC680962similar to fibrillarin1865390746541753Rat
1583004Nme5NME/NM23 family member 5182616355826180742Rat
1561153Myo7bmyosin VIIb182358830723669841Rat
1587258Pcdhga12protocadherin gamma subfamily A, 12182959266429667865Rat
1587259Pcdhga2protocadherin gamma subfamily A, 2182949395429667865Rat
1587260Ankrd29ankyrin repeat domain 291834363013494292Rat
1587262LOC498816similar to RNA binding motif, single stranded interacting protein 218796846797934Rat
1586479Tslpthymic stromal lymphopoietin182444740924454244Rat
1583648Dnd1DND microRNA-mediated repression inhibitor 1182837869228381316Rat
1586463Wdr36WD repeat domain 36182447364524501773Rat
1585817LOC680972similar to ribosomal protein L36183328138633281699Rat
1561771RGD1561771similar to EEF1A1 protein18684820686801Rat
1586730LOC684764similar to cytokine induced protein 29 kDa1815990821602262Rat
1583423Kdm3blysine demethylase 3B182638085926436701Rat
1561985Dtnadystrobrevin, alpha181468719314944232Rat
1561788RGD1561788similar to homolog of yeast ribosome biogenesis regulatory protein RRS1181066424110665367Rat
1563879LOC498829Ab2-143181557139615575435Rat
1565779RGD1565779similar to hypothetical protein E230025N22182828605128295204Rat
1563132Pcdhb2protocadherin beta 2182900599629008782Rat
1563861RGD1563861similar to ribosomal protein L10181500387215004638Rat
1561352Mtcp1mature T-cell proliferation 118126189130123Rat
1566345LOC498836LRRG00125182421873424219463Rat
1565635Zfp136zinc finger protein 13618609472618190Rat
1359466Cxxc5CXXC finger protein 5182742759127458579Rat
1584390PotefPOTE ankyrin domain family, member F182362651823629132Rat
1564574RGD1564574similar to 40S ribosomal protein S16182748383127500578Rat
1583536LOC681155similar to 60S ribosomal protein L6 (Neoplasm-related protein C140)1894849369514865Rat
1566178Klhl14kelch-like family member 14181280425312917828Rat
1593851Fam53cfamily with sequence similarity 53, member C182636405026378173Rat
1589785Gpr17G protein-coupled receptor 17182357621223583177Rat
1590761Pcdhga1protocadherin gamma subfamily A, 1182948740429667865Rat
1593785Lrrtm2leucine rich repeat transmembrane neuronal 2182681781626822864Rat
1589576Rnf14ring finger protein 14183013162730155686Rat
1592101LOC291761similar to Elongation factor 1-gamma (EF-1-gamma) (eEF-1B gamma)181143704511438463Rat
1592102LOC291758similar to leucine aminopeptidase 3181158152811582618Rat
1592103Dsg3desmoglein 3181179890511833415Rat
1586980Reep2receptor accessory protein 2182643813026447165Rat
1588513Plac8l1PLAC8-like 1183416766734192137Rat
1588514LOC364851similar to transketolase183384251033844384Rat
1588516Pcdhgb7protocadherin gamma subfamily B, 7182957912929667868Rat
1588517LOC364842similar to Ferritin light chain 1 (Ferritin L subunit 1)182944979629450237Rat
1588518LOC364832similar to heat shock protein 8182244294622444872Rat
1588520LOC364817similar to prohibitin1869698746971761Rat
1588182LOC680784similar to mitochondrial ribosomal protein S18B1858418135845074Rat
1591344Spata45spermatogenesis associated 45181812551218125881Rat
1588521LOC364811similar to SDA1 domain containing 11820646062066630Rat
1588522LOC364806similar to Elongation factor 1-gamma (EF-1-gamma) (eEF-1B gamma)18686787689788Rat
1585624Gnpda1glucosamine-6-phosphate deaminase 1183016543530177462Rat
1584696Grxcr2glutaredoxin and cysteine rich domain containing 2183398468933998094Rat
1585423Ttc39ctetratricopeptide repeat domain 39C1837688023887932Rat
1589056LOC685830similar to tRNA splicing endonuclease 34182047688320478138Rat
1585413Cabyrcalcium binding tyrosine phosphorylation regulated1838920623904391Rat
1590602Tmem241transmembrane protein 2411831680723318340Rat
1584707Prelid2PRELI domain containing 2183386993433961320Rat
1583592Zmat2zinc finger, matrin type 2182840960628414241Rat
1590736Mapre2microtubule-associated protein, RP/EB family, member 2181502867515169553Rat
1590895LOC307495similar to biliverdin reductase B (flavin reductase (NADPH))182831033928315448Rat
1590896LOC307465similar to karyopherin (importin) alpha 2183276966932776779Rat
1586622LOC686074similar to 60S ribosomal protein L35182315940123159843Rat
1586633LOC686063similar to cytoplasmic beta-actin182312917123129806Rat
1595453LOC680171similar to SEC13-like 118967396968674Rat
1598664Pcdhga3protocadherin gamma subfamily A, 3182949914829667865Rat
1592104LOC291746similar to Elongation factor 2 (EF-2)181223437412236924Rat
1592105Hsc70-ps2heat shock cognate protein 70, pseudogene 2181621046716212736Rat
1591671LOC681731similar to Voltage-dependent anion-selective channel protein 1 (VDAC-1) (mVDAC1) (mVDAC5) (Outer mitochondrial membrane protein porin 1) (Plasmalemmal porin)182108469821085621Rat
1595554LOC678864similar to ubiquitin-conjugating enzyme variant Kua181020945410281082Rat
1594845Prob1proline-rich basic protein 1182724251127249053Rat
1596873Esco1establishment of sister chromatid cohesion N-acetyltransferase 11816305601686803Rat
1596840Pcdhb9protocadherin beta 9182910529829108468Rat
1596855LOC680032similar to Fructose-bisphosphate aldolase A (Muscle-type aldolase)182909563629097081Rat
1596861LOC680026similar to ATP synthase, H+ transporting, mitochondrial Fo complex, subunit G1816648001668290Rat
1594804Ecscrendothelial cell surface expressed chemotaxis and apoptosis regulator182730971127319106Rat
1591977Impactimpact RWD domain protein1841088724147571Rat
1596770LOC681320similar to 60S ribosomal protein L3 (L4)181160765011608894Rat
1596759LOC681331similar to apoptosis inhibitor 5181163625111642861Rat
1591842Garem1GRB2 associated regulator of MAPK1 subtype 1181242016912585323Rat
1591897Ube2d2ubiquitin-conjugating enzyme E2D 2182736466527405589Rat
1598047LOC681224similar to cyclin D binding myb-like transcription factor 1181122702911229258Rat
1594228Pcdhb20protocadherin beta 20182921188329215258Rat
2312582Pcdhgc5protocadherin gamma subfamily C, 5182964720129666336Rat
2322847LOC100363500hypothetical LOC100363500182421228024213310Rat
2320691LOC100361170AKT interacting protein-like1834249533428838Rat
2322275LOC100360378hypothetical LOC100360378182913743729139285Rat
2322319Fhod3formin homology 2 domain containing 3181599307916425796Rat
2323168Selenok-ps5selenoprotein K, pseudogene 5183377230033772969Rat
2323233Cystm1cysteine-rich transmembrane module containing 1182794586228013509Rat
2321885LOC10036057240S ribosomal protein S15-like181936632419368584Rat
2321916LOC100360541cyclin B2-like18617183636852Rat
2323347LOC100363294stem-loop binding protein-like182635647826363577Rat
2323363LOC100363277Ribosomal protein, large, P0-like183366415833665636Rat
2323374IgipIgA-inducing protein182790457327905513Rat
4888581Mir3582microRNA 35821818850631885180Rat
4888552Mir3571microRNA 35711818875261887636Rat
2324544LOC100362510tubulin alpha 6-like181178767211788464Rat
2325528Mir1microRNA 11818875371887623Rat
2325557Mir187microRNA 187181573119415731297Rat
2325571Mir133a1microRNA 133a-11818850821885168Rat
4109663Cct6a-ps5chaperonin containing Tcp1, subunit 6A (zeta 1), pseudogene 5183404009034042051Rat
4888598Mir1949microRNA 1949182715559527155691Rat
2324556Eif4ebp3eukaryotic translation initiation factor 4E binding protein 3182826308928268033Rat
2324800LOC100363089cytochrome b5 type A (microsomal)-like181417912214179563Rat
4892133Ankhd1ankyrin repeat and KH domain containing 1182816188228260917Rat
5130376Snhg4small nucleolar RNA host gene 4 (non-protein coding)182715843327158669Rat
6495224LOC100911019serine/arginine-rich splicing factor 3-like182527432525274813Rat
6493059LOC100911367uncharacterized LOC100911367183123627731252492Rat
6487485LOC100912385zinc finger protein 260-like182851639128519872Rat
6501875LOC100909782uncharacterized LOC1009097821821730742187558Rat
6502448LOC100909691importin-5-like181203772312039781Rat
6502918LOC100909541ATP synthase subunit g, mitochondrial-like183382700033827309Rat
6499927LOC100910201uncharacterized LOC100910201182340323323417959Rat
6504280Zfp397zinc finger protein 397181524176415253148Rat
7527767LOC102555023uncharacterized LOC102555023181291489212918657Rat
7524065LOC102547344lateral signaling target protein 2 homolog181825008418253006Rat
7509468LOC102547869uncharacterized LOC102547869183346394133546731Rat
7498283LOC102557111WAS/WASL-interacting protein family member 3-like182788461827905500Rat
7509723LOC102553011uncharacterized LOC102553011181544996315478670Rat
7533724LOC102555022uncharacterized LOC1025550221826299132636062Rat
7516452LOC102546723uncharacterized LOC1025467231840318414035774Rat
7647017Cmc4C-X9-C motif containing 418125308132163Rat
7613549LOC102549857uncharacterized LOC102549857182587653325878164Rat
7648889LOC102546931uncharacterized LOC102546931182119168421291797Rat
7650468LOC102550858uncharacterized LOC102550858182710449427110858Rat
7650892LOC102549754zinc finger protein 726-like18427830428828Rat
7635703LOC102551904uncharacterized LOC102551904181183503811837513Rat
7637519LOC102549915signal recognition particle 19 kDa protein-like182595080025951722Rat
7641502LOC102546350uncharacterized LOC102546350182011147320130786Rat
7590894Tex51testis expressed 51182409301524097223Rat
7591891LOC102551758uncharacterized LOC102551758182755724427560273Rat
7598702LOC102553404uncharacterized LOC102553404181100116211019181Rat
7565214LOC102549443uncharacterized LOC102549443182505782525070704Rat
7583405LOC102551724uncharacterized LOC1025517241863652616447354Rat
7551261LOC102551287uncharacterized LOC1025512871855539435607857Rat
7604961LOC102546433uncharacterized LOC10254643318121784126065Rat
7566111LOC102555446mitochondrial thiamine pyrophosphate carrier-like1831059303106927Rat
7567273LOC102547033zinc finger protein 624-like18359334371945Rat
7695838LOC102546844uncharacterized LOC102546844182109663621105059Rat
7705638LOC102553967protein RCC2-like1816389871641047Rat
7683954LOC102547190uncharacterized LOC1025471901843634984372177Rat
7687052LOC102547510uncharacterized LOC102547510181858231618799213Rat
7690490LOC102549314uncharacterized LOC1025493141848541894859291Rat
7733249LOC102551486uncharacterized LOC102551486181201461012021819Rat
7670702LOC102551809uncharacterized LOC102551809181192270811928930Rat
7699321LOC102552794proline-rich nuclear receptor coactivator 1-like181529034315294509Rat
7701056LOC102547511uncharacterized LOC102547511183045148430489138Rat
7678926LOC10255357260S ribosomal protein L32-like181583163315832047Rat
7679439LOC102551353uncharacterized LOC1025513531856594795680970Rat
7710893LOC102546308ATP synthase subunit g, mitochondrial-like1837451153748135Rat
9133771LOC103694196uncharacterized LOC103694196182952837729551871Rat
9089883LOC10369417660 kDa heat shock protein, mitochondrial pseudogene1815879311590330Rat
9179798LOC103694167uncharacterized LOC1036941671831820283196136Rat
9179805LOC103694262cyclin-dependent kinase 1 pseudogene183390562033906471Rat
9188764LOC10369417060S ribosomal protein L27a pseudogene1872017497202240Rat
9208196LOC103694180uncharacterized LOC103694180181728731017298283Rat
9353936LOC103694952uncharacterized LOC103694952182580088325819754Rat
9272642LOC103694193NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4 pseudogene182754707827548571Rat
9367157LOC10369420440S ribosomal protein SA pseudogene183417172934177399Rat
9292390LOC103694159NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 4 pseudogene1811204291120655Rat
9258222LOC10369416960S ribosomal protein L391863263166326696Rat
9301181LOC10369417539S ribosomal protein L30, mitochondrial pseudogene182003614220041958Rat
9264054LOC103694185protein SET-like182602222726024458Rat
9433650LOC103694950uncharacterized LOC103694950182245930122466852Rat
9445303LOC103694199uncharacterized LOC103694199183364028333664881Rat
11469925LOC108348747uncharacterized LOC1083487471854288945441470Rat
11474431LOC108348866non-histone chromosomal protein HMG-17 pseudogene1840436384047054Rat
11357404LOC10834877060S ribosomal protein L26-like 1 pseudogene182916503729171320Rat
11361905LOC108348849glyceraldehyde-3-phosphate dehydrogenase pseudogene183189817631899193Rat
11436391LOC10834884640S ribosomal protein S10 pseudogene1822676782268175Rat
11458426LOC10834875440S ribosomal protein S26-like181213877112139362Rat
11369277LOC108348772uncharacterized LOC108348772182998329130000247Rat
11451504LOC108348765uncharacterized LOC108348765182636357126366910Rat
11368541LOC108348201protocadherin beta-7-like182917886929183847Rat
11431944LOC108348751uncharacterized LOC1083487511868532376865278Rat
11461088LOC108348847uncharacterized LOC1083488471854212635428777Rat
11419083LOC108348752uncharacterized LOC1083487521870559367070705Rat
11422045LOC108348758uncharacterized LOC108348758181806733018139478Rat
11376545Pcdhb6lprotocadherin beta-6-like182914424129149869Rat
11410492LOC108348741uncharacterized LOC1083487411819659881972501Rat
11389422LOC108348750uncharacterized LOC1083487501864867606506611Rat
11391260LOC108348753uncharacterized LOC1083487531889629389079803Rat
11502477LOC10834885040S ribosomal protein S28 pseudogene183385617433856387Rat
11481642LOC108348742uncharacterized LOC1083487421819478491965675Rat
11514929LOC108353164uncharacterized LOC108353164182670856326728317Rat
11492646Pcdhb16protocadherin beta 16182918540529195669Rat
41105457LOC120098438U6 spliceosomal RNA182525852925258634Rat
41321995LOC120098185tubulin alpha chain-like181178826111791295Rat
41085620LOC120098168uncharacterized LOC120098168182880800628820392Rat
41136700LOC120098387small nucleolar RNA SNORA17182423632524236450Rat
41166828NEWGENE_40926764transfer RNA proline (anticodon AGG)182675270626752780Rat
41167718LOC120098315uncharacterized LOC120098315183074279630779070Rat
41087642LOC120098326uncharacterized LOC120098326182947274429480429Rat
41113362LOC120098262uncharacterized LOC120098262182023826120243346Rat
41138763LOC120098298UBA-like domain-containing protein 21819016011902099Rat
41139103LOC120098404small nucleolar RNA SNORA26182650802726508142Rat
41168943LOC120098429U6 spliceosomal RNA183383705933837165Rat
41168946LOC120098418small nucleolar RNA U3181113045211130556Rat
41250271LOC120098265uncharacterized LOC120098265181249349512509604Rat
41283036LOC120098266uncharacterized LOC120098266182473052024765008Rat
41205980LOC120098204uncharacterized LOC120098204183140744231452476Rat
41279374LOC120098222uncharacterized LOC120098222182378721123806982Rat
41284742LOC120098166protocadherin alpha-8-like182862606028818723Rat
41115189LOC120098364small nucleolar RNA SNORA21182347861323478747Rat
41171414LOC120098302igE-binding protein-like182230425214Rat
41173243LOC120098345U7 small nuclear RNA182579781525797876Rat
41208786LOC120098428U6 spliceosomal RNA182635916126359267Rat
41327931LOC120098443U1 spliceosomal RNA182011027520110438Rat
41328206LOC120098333cytochrome c oxidase subunit 7C, mitochondrial-like183094480030944969Rat
41362300LOC120098167protocadherin alpha-2-like182858910828818722Rat
41093685LOC120098360small nucleolar RNA SNORA13182540445225404585Rat
41186981LOC120098313SLC35A4 upstream open reading frame protein-like182828059228282477Rat
41187057LOC120098277zinc finger protein 813-like18488576489553Rat
41261369LOC120098232uncharacterized LOC1200982321853573335379176Rat
41329969LOC120098228uncharacterized LOC120098228182399037924009573Rat
41148153LOC120098267uncharacterized LOC120098267182514858725165025Rat
41149760LOC120098197uncharacterized LOC120098197181707994717092021Rat
41176885LOC120098138uncharacterized LOC1200981381863959546406241Rat
41212325LOC120098434U6 spliceosomal RNA1875149757515080Rat
41330336LOC120098301protocadherin alpha-7-like182863202828637288Rat
41150048NEWGENE_735086protocadherin alpha subfamily C, 1182874035328750216Rat
41150328LOC120098334uncharacterized LOC120098334183048918730498974Rat
41150603LOC120098310mucin-6-like182657999326594636Rat
41099412Smim33small integral membrane protein 33182732530227327193Rat
41122946LOC120098299ribosomal protein L18-like182280094422801850Rat
41154066LOC120098206uncharacterized LOC1200982061855116915553876Rat
41180547LOC120098403small nucleolar RNA SNORA40182953461329534733Rat
41101543LOC120098381small nucleolar RNA SNORA17182425045024250580Rat
41193066LOC120098272uncharacterized LOC120098272181208142912093465Rat
41288194LOC120098314ATP synthase F(0) complex subunit C1, mitochondrial-like182885858528862055Rat
41369178LOC120098221uncharacterized LOC1200982211881283678132815Rat
41369412LOC120098112uncharacterized LOC120098112181607964916090990Rat
41396114LOC120098231uncharacterized LOC1200982311845977334615485Rat
41217115LOC120098243uncharacterized LOC1200982431854853595495255Rat
41217121LOC120098432U6 spliceosomal RNA182477719624777302Rat
41217601LOC120098271uncharacterized LOC120098271182585466425860947Rat
41218251LOC120098162uncharacterized LOC120098162182647934526486101Rat
41218349LOC120098119uncharacterized LOC120098119183412359534151088Rat
41397459LOC120098389small nucleolar RNA SNORA171869943926994528Rat
41070320LOC120098144uncharacterized LOC120098144182733943827349050Rat
41184218LOC120098355small nucleolar RNA SNORD63182654013726540204Rat
41219354LOC120098431U6 spliceosomal RNA181268326212683364Rat
41105460LOC120098427U6 spliceosomal RNA18274507274613Rat
41129914LOC120098207uncharacterized LOC120098207181506484215071132Rat
41186084LOC120098303zinc finger protein 850-like18405654443575Rat
41196987LOC120093049small nucleolar RNA SNORA19183304590833046048Rat
41271556LOC120098382small nucleolar RNA SNORA171882652818265410Rat
41294005LOC120098118protein transport protein Sec61 subunit gamma-like183405554034064422Rat
41350816LOC120098426U6 spliceosomal RNA181551852015518626Rat
41401461LOC120098396small nucleolar RNA SNORA17181439743314397563Rat
41081752LOC120098304WW domain binding protein 1-like18674850678381Rat
41106525LOC120098305DNA-directed RNA polymerases I, II, and III subunit RPABC3-like1812576661258121Rat
41130071LOC120098161serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform-like183376815333771743Rat
41198857LOC120098153uncharacterized LOC120098153182206823022110779Rat
41230128LOC120098439U6 spliceosomal RNA181741828017418367Rat
41273281LOC120098419U4 spliceosomal RNA181890879318908908Rat
41402961LOC120098335uncharacterized LOC120098335183108878631096355Rat
41083422LOC1200983405S ribosomal RNA182647851126478629Rat
41165265LOC12009811540S ribosomal protein S29-like182098242820982760Rat
41199427LOC120098220uncharacterized LOC120098220182713097927140288Rat
41231671LOC120098435U6 spliceosomal RNA183274616632746268Rat
41295872LOC120098331uncharacterized LOC1200983311836930753768701Rat
41320385LOC120098332uncharacterized LOC1200983321836578833661456Rat
41320469LOC120098124uncharacterized LOC120098124183024868730258445Rat
41352637LOC120098359small nucleolar RNA SNORA31182920948229209583Rat
41084204LOC120098213uncharacterized LOC1200982131824816832492307Rat
41109350LOC120098395small nucleolar RNA SNORA17181982761519827741Rat
41202102LOC120098269uncharacterized LOC120098269182540307925405115Rat
40972159LOC120098297uncharacterized LOC120098297182419345424207788Rat
40996649LOC120098406U6atac minor spliceosomal RNA182739233927392461Rat
40972921NEWGENE_40938314transfer RNA serine (anticodon AGA)1883872238387304Rat
41340234LOC120098216uncharacterized LOC120098216182455839224572223Rat
40926502LOC120098325uncharacterized LOC120098325182971035129729530Rat
40977739LOC120098356small nucleolar RNA SNORA701818567641856880Rat
41014578LOC120098385small nucleolar RNA SNORA17182570042225700556Rat
41015119LOC120098349small nucleolar RNA SNORA62/SNORA6 family182432317024323325Rat
41015557LOC120098257uncharacterized LOC120098257181414626814153430Rat
40955952NEWGENE_40934091transfer RNA alanine (anticodon AGC)182436171824361789Rat
40980709LOC120098415U2 spliceosomal RNA181402922314029406Rat
40929473LOC120098430U6 spliceosomal RNA182673841626738522Rat
40956852LOC120098268uncharacterized LOC120098268182516595525169703Rat
41003880LOC120098253uncharacterized LOC120098253182294782022955187Rat
40933636LOC120098248uncharacterized LOC1200982481854582705462819Rat
40960381LOC120098160uncharacterized LOC1200981601832077933220103Rat
40989749LOC120098416U2 spliceosomal RNA182535315825353328Rat
40990016LOC120098141uncharacterized LOC120098141182147176321570788Rat
40940132LOC120098122uncharacterized LOC120098122181494893914969988Rat
40940619LOC120098348small nucleolar RNA SNORA74182715776527157961Rat
40942616LOC120098383small nucleolar RNA SNORA17181782146517821596Rat
40943294LOC120098229uncharacterized LOC120098229182409705724101106Rat
40969390LOC120098448U6 spliceosomal RNA183013293230133034Rat
40943372NEWGENE_40926764transfer RNA proline (anticodon AGG)183263524732635327Rat
40943959LOC12009830960S ribosomal protein L23a-like182565633325656683Rat
40994721LOC120098126uncharacterized LOC120098126183028433330287973Rat
41048330LOC120098350small nucleolar RNA SNORA72182839098328391114Rat
41076199LOC120098330uncharacterized LOC1200983301838897233899593Rat
41244098LOC120098156ubiquitin-conjugating enzyme E2 C-like183232131632321725Rat
41244839LOC120098390small nucleolar RNA SNORA171817049451705053Rat
41078696LOC120098181uncharacterized LOC120098181182426174624265324Rat
41080340LOC120098111uncharacterized LOC120098111181665440416672905Rat
41054661LOC120098407small nucleolar RNA U13182691710726917200Rat
41338301LOC120098413U2 spliceosomal RNA1837495233749672Rat
41151483LOC120098391small nucleolar RNA SNORA171832925623292696Rat
41336072LOC120098343U7 small nuclear RNA182563899525639057Rat
41221388LOC12009826060S ribosomal protein L36a-like1813578171358712Rat
41059240LOC120098296uncharacterized LOC120098296182420836324212249Rat
41298473LOC120098411U2 spliceosomal RNA182860983728609969Rat
41315285LOC120098402small nucleolar RNA SNORA17182205448422054597Rat
41033437LOC120098417small nucleolar RNA U31896485019648587Rat
41061447LOC120098123uncharacterized LOC120098123181483976214857935Rat
41061823LOC120098263uncharacterized LOC120098263182286871922879737Rat
41301905LOC120098397small nucleolar RNA SNORA171861091936109323Rat
41302367LOC120098127uncharacterized LOC120098127183035758630383465Rat
41334145LOC120098187uncharacterized LOC120098187182779871627865414Rat
41334317LOC120098328uncharacterized LOC1200983281840117054016669Rat
41303873LOC120098193uncharacterized LOC120098193182451873624530112Rat
41065389LOC120098376small nucleolar RNA SNORA17182307170523071836Rat
41236582LOC12009812560S ribosomal protein L34-like183028140630281757Rat
41237235LOC120098388U1 spliceosomal RNA181212848412128622Rat
41304700LOC120098203uncharacterized LOC1200982031879106227951444Rat
41307046LOC120098423U6 spliceosomal RNA181585287215852978Rat
41307513LOC120098354small nucleolar RNA SNORD63182654146926541541Rat
41310718LOC120098329uncharacterized LOC1200983291841000404108710Rat
41311100LOC120098425U6 spliceosomal RNA1824972622497368Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10287D18Wox14148182458653424586682Ratregion
10689D18Mit5110183135940831359530Ratregion
33949D18Mit1496181527559715275693Ratregion
33971D18Mit7204181287462012874824Ratregion
33975D18Mit1223818805014805250Ratregion
34059D18Mit2108181495133714951437Ratregion
34296D3Mgh24116181499676814996831Ratregion
34550D18Mgh9136182479697724797117Ratregion
11461D18Mit1245181194429911944544Ratregion
11462D18Wox7200181194427311944420Ratregion
33577D18Mit1583182730725627307341Ratregion
33606D18Mit397181963384219633937Ratregion
33705D18Mit131481820883482088498Ratregion
33766D18Mit4125182653319226533309Ratregion
36129D18Rat301361855845375584636Ratregion
37466D3Rat1051331822691082269241Ratregion
37480D18Rat481481857040065704152Ratregion
37524D18Rat63245182754179827542049Ratregion
37578D18Rat65195181179151811791709Ratregion
35366D18Rat28158181136754511367701Ratregion
35491D18Rat22125183041899130419110Ratregion
35495D18Rat35175182802602128026196Ratregion
35511D18Rat311281851858585185979Ratregion
35521D18Rat29158181352979513529957Ratregion
37020D18Rat37158181730060017300786Ratregion
37128D18Rat1332131832065053206708Ratregion
37908D18Rat67147182301232123012468Ratregion
37910D18Rat71128183007625430076376Ratregion
37958D18Rat68112182696842226968532Ratregion
36450D18Rat322111819502491950460Ratregion
36548D18Rat27147181800745218007599Ratregion
35020D18Rat36321182768042127680742Ratregion
35803D18Rat25154182004704220047196Ratregion
35815D18Rat23294182612480326125080Ratregion
39682D18Rat106114181367431613674433Ratregion
39726D18Rat1112491832580043258245Ratregion
39888D18Rat1172271825180512518278Ratregion
38010D18Rat462291822494772249700Ratregion
38350D18Rat38188182206624222066430Ratregion
38366D18Rat59202182805046428050665Ratregion
40592D18Rat132248182473227124732519Ratregion
40622D18Rat47238181704648017046730Ratregion
38430D18Rat622251867912516791521Ratregion
38632D18Rat72200181746092317461137Ratregion
38708D18Rat642881850968125097100Ratregion
40076D18Rat107150181141823611418394Ratregion
40096D18Rat102168181927890119279072Ratregion
39230D18Rat70207181704755117047766Ratregion
39294D18Rat51163183024674330246916Ratregion
39326D18Rat66213182476879624769009Ratregion
39550D18Rat100211182960700129607214Ratregion
39582D18Rat1092121842079414208141Ratregion
41520D18Rat104163182206618822066351Ratregion
42633D2Rat36720818893930894144Ratregion
42420D18Rat1522101872660117266214Ratregion
42421D18Rat146223181303474413034959Ratregion
42423D18Rat151117182629626626296385Ratregion
42424D18Rat150148182812729328127441Ratregion
40782D18Rat99225183055852430558703Ratregion
40842D18Rat101209182654808226548295Ratregion
40914D18Rat1102251829157092915900Ratregion
40926D18Rat105243181690511016905393Ratregion
40926D18Rat105243181690511016905341Ratregion
41552D18Rat11415018838348838504Ratregion
41572D18Rat103162181953929719539463Ratregion
43108D18Rat1531301867701256770253Ratregion
43109D18Rat1342041862228396223031Ratregion
43111D18Rat148149181490800314908139Ratregion
43112D18Rat147236181171900111719218Ratregion
43113D18Rat131132182375890223759034Ratregion
43114D18Rat144237182612907526129313Ratregion
43115D18Rat154146182607439426074530Ratregion
43116D18Rat130236182624292026243137Ratregion
43117D18Rat129221183051257930512804Ratregion
43118D18Rat141220183273218732732390Ratregion
45555D18Got30118183081197230812090Ratregion
45556D18Got32195183122238031222575Ratregion
45557D18Got28203182995867329958876Ratregion
45558D18Got29299182981900529819304Ratregion
45559D18Got27157183243172132431878Ratregion
45560D18Got33153182743100227431155Ratregion
45562D18Got35145182647958426479729Ratregion
45563D18Got34175182632100926321184Ratregion
45566D18Got38191182581653025816721Ratregion
45567D18Got36249182539766525397914Ratregion
45568D18Got37241182463080224631052Ratregion
45569D18Got25143182379182723791970Ratregion
45570D18Got23218182388256523882783Ratregion
45571D18Got24212182250712022507332Ratregion
45572D18Got26275182208726222087539Ratregion
45573D18Got22256181981598519816241Ratregion
45575D18Got1894181615410316154197Ratregion
45578D18Got17167181420046514200632Ratregion
45579D18Got14286181287464412874930Ratregion
45580D18Got13192181091246810912660Ratregion
45581D18Got15281181224271212242990Ratregion
45582D18Got112031898795779879780Ratregion
45584D18Got101281884879928488120Ratregion
45585D18Got122861887803238780609Ratregion
45588D18Got91231873635257363648Ratregion
45589D18Got81371869533626953499Ratregion
45589D18Got81371869533626953458Ratregion
45590D18Got21471857198725720023Ratregion
45591D18Got41551852340045234159Ratregion
45592D18Got841551832607053260860Ratregion
45593D18Got51531862920606292213Ratregion
45596D18Got11901812584451258635Ratregion
60744D18Rat143214183204049732040709Ratregion
60774D18Wox193181235769312357786Ratregion
60164D18Got19165181546396915464134Ratregion
625821D18Got61761879390027939178Ratregion
625832D18Got21229181945092419451153Ratregion
62460D18Uia3192181781924617819444Ratregion
66569D18Mco12051832872483287445Ratregion
66574D18Mco2163183421073134210888Ratregion
67278D18Arb1375181194285711943232Ratregion
1578822D18Chm42158183086264630862802Ratregion
1578823D18Chm88172181150186711502035Ratregion
1578828D18Chm161701881649728165134Ratregion
1578830D18Chm25152182128448521284637Ratregion
1578864D18Chm89242181260885612609094Ratregion
1630694D18Wox2179182966636829666447Ratregion
1631508D18Got100125183016091330161038Ratregion
1631641D18Wox241551877768877777044Ratregion
1632116D9Got227151182537527225376950Ratregion
1578884D18Chm19210181208366712083877Ratregion
1578885D18Chm6195181593401015934209Ratregion
1578889D18Chm222081833057023305910Ratregion
1578906D18Chm1168182349956423499733Ratregion
1578913D18Chm2225182473526124735488Ratregion
1578945D18Chm87199181125670711256906Ratregion
1578949D18Chm91219181220506612205285Ratregion
1578955D18Chm841511878661207866271Ratregion
1578960D18Chm26203182211106422111267Ratregion
1578969D18Chm122211851524535152676Ratregion
1578999D18Chm862081895400719540275Ratregion
1579008D18Chm282411898796209879861Ratregion
1579014D18Chm8164181812599118126155Ratregion
1579017D18Chm142191861354476135669Ratregion
1579032D18Chm90219181271057612710797Ratregion
1579043D18Chm272361887925558792791Ratregion
1579044D18Chm3018518838607838796Ratregion
1579057D18Chm44227183299193432991975Ratregion
1579057D18Chm44227183299174432992360Ratregion
1579057D18Chm44227183299174432991975Ratregion
1579068D18Chm5242182705686427057108Ratregion
1579070D18Chm41205182980498229805189Ratregion
1579080D18Chm11176182142618621426364Ratregion
1579086D18Chm152201873155907315814Ratregion
1579097D18Chm43214183198368231983896Ratregion
1579101D18Chm132251856636695663898Ratregion
1579109D18Chm39224182787087927871099Ratregion
1579110D18Chm23208181860604318606255Ratregion
1579112D18Chm851771891195989119775Ratregion
1579116D18Chm24174181975214919752325Ratregion
1579120D18Chm29240181179611611796356Ratregion
1579134D18Chm321341834834283483562Ratregion
1579142D18Chm7201181675893416759137Ratregion
1579149D18Chm3211182557098525571196Ratregion
1579150D18Chm2023118705093705326Ratregion
1579158D18Chm4167182653805826538225Ratregion
1579160D18Chm93237181194890611949143Ratregion
1579164D18Chm45184183387658833876774Ratregion
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5499539stSG6118066111827298182730449Ratregion
5500246AI851755107182681798026818087Ratregion
5499579G678551499182726699227268491Ratregion
5499583At-8L-2631132181107969411080826Ratregion
5502156MARC_6511-6512:996689730:1971182827666828277639Ratregion
5500184REN160272551878102667810521Ratregion
5500286D5S2301E112182721243327212545Ratregion
5499669MARC_7291-7292:992008311:10182353168623533200Ratregion
5500617RH1362582011833796313379832Ratregion
5500709RH2869873182256606222566135Ratregion
5500537RH13586316718718302718467Ratregion
5503280UniSTS:2377382441821748002175044Ratregion
5503282UniSTS:2377353751811152181115593Ratregion
5503288UniSTS:2377392371816320881632325Ratregion
5503290UniSTS:237784428182817856528178993Ratregion
5503306UniSTS:237875227182815504828155275Ratregion
5501219PMC156129P2138182404383024044103Ratregion
5501375STS-Z407081135182473204624733183Ratregion
5501570RH26327163181492033414920497Ratregion
5506159Lrrtm2637182682102826821665Ratregion
5506583AW4645171031817029011702997Ratregion
5501802MARC_13470-13471:1002300368:2125181538505915386080Ratregion
5502114MARC_4701-4702:996679619:1324182827598428276704Ratregion
5502134MARC_5405-5406:996690354:163183366430733664370Ratregion
5502259AA959952246182826942628269672Ratregion
5502263C76941205181203785612038058Ratregion
5502383RH124673314182966971029670024Ratregion
5502662X97986134181150283011502964Ratregion
5502735GALNT1129181556240615563364Ratregion
5502461RH1249331471822189202219067Ratregion
5502750ALDOA246182909663929096885Ratregion
5502257L33779111181145202911452140Ratregion
5502291RH1242853981816401551640553Ratregion
5502413RH124760215181195075711950972Ratregion
Position Markers

Peak: (D18Rat65)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21811,791,518 - 11,791,709 (-)MAPPER
Rnor_6.01815,695,872 - 15,696,062NCBI
Rnor_5.01815,466,312 - 15,466,502UniSTS
RGSC_v3.41812,245,097 - 12,245,288RGD
RGSC_v3.41812,245,098 - 12,245,288UniSTS
RGSC_v3.11812,271,744 - 12,271,934RGD
Celera1811,807,072 - 11,807,262UniSTS
RH 3.4 Map18109.9RGD
RH 3.4 Map18109.9UniSTS
RH 2.0 Map18759.4RGD
SHRSP x BN Map185.85RGD
Cytogenetic Map18p12UniSTS


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
8552968Pigfal19Plasma insulin-like growth factor 1 level QTL 1911.4blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)18125758124Rat
9590248Scort10Serum corticosterone level QTL 1019.710.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)18125758124Rat
2312598Bp340Blood pressure QTL 3400.05arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)18130558703Rat
2300180Bmd67Bone mineral density QTL 674.80.0001femur mineral mass (VT:0010011)bone mineral density (CMO:0001226)18134291613Rat
2293661Bss50Bone structure and strength QTL 504.640.0003lumbar vertebra size trait (VT:0010518)lumbar vertebra trabecular cross-sectional area (CMO:0001692)18134291613Rat
61388Bp2Blood pressure QTL 23.23arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)18135374722Rat
9589153Insul31Insulin level QTL 317.150.05blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)18142547119Rat
1641910Colcr3Colorectal carcinoma resistance QTL 35.020.000007intestine integrity trait (VT:0010554)poorly differentiated malignant colorectal tumor number (CMO:0002076)18224947722066430Rat
1641910Colcr3Colorectal carcinoma resistance QTL 35.020.000007intestine integrity trait (VT:0010554)poorly differentiated malignant colorectal tumor surface area measurement (CMO:0002078)18224947722066430Rat
2299160Iddm35Insulin dependent diabetes mellitus QTL 352.79blood glucose amount (VT:0000188)age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)18420794160377792Rat
2312568Glom21Glomerulus QTL 2120.005kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)18518585840503530Rat
11565454Kidm59Kidney mass QTL 590.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)18679125112205285Rat
12904714Cm131Cardiac mass QTL 1310.002heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)18679125112205285Rat
12904715Cm132Cardiac mass QTL 1320.001heart right ventricle mass (VT:0007033)heart right ventricle weight to body weight ratio (CMO:0000914)18679125112205285Rat
12904716Am21Aortic mass QTL 210.005aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)18679125112205285Rat
2301409Cm70Cardiac mass QTL 700.001heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)18679125112205285Rat
2293708Bss46Bone structure and strength QTL 468.80.0001lumbar vertebra morphology trait (VT:0010494)lumbar vertebra cortical cross-sectional area (CMO:0001690)181179151863636873Rat
1578661Bss20Bone structure and strength QTL 203.7femur morphology trait (VT:0000559)femoral neck cross-sectional area (CMO:0001697)181179151883218561Rat
1578667Bss21Bone structure and strength QTL 213.5femur morphology trait (VT:0000559)femoral neck cortical cross-sectional area (CMO:0001702)181179151883218561Rat
61382Bp46Blood pressure QTL 4618.8arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)181194179131393320Rat
631264Scl22Serum cholesterol level QTL 226.2blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)181194179131393320Rat
12904690Cm129Cardiac mass QTL 1290.001heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)181194427326548295Rat
12904689Cm128Cardiac mass QTL 1280.001heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)181194427326548295Rat
12904693Am20Aortic mass QTL 200.001aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)181194427326548295Rat
12904695Kidm73Kidney mass QTL 730.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)181194427326548295Rat
12904691Cm130Cardiac mass QTL 1300.001heart right ventricle mass (VT:0007033)heart right ventricle weight to body weight ratio (CMO:0000914)181194427326548295Rat
12904680Bw189Body weight QTL 1890.019body mass (VT:0001259)body weight (CMO:0000012)181194427326548295Rat
2301410Bp317Blood pressure QTL 3170.004arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)181194427326548295Rat
1331781Scl28Serum cholesterol level QTL 283.995blood HDL cholesterol amount (VT:0000184)serum high density lipoprotein cholesterol level (CMO:0000361)181194429924797117Rat
1331766Bp236Blood pressure QTL 2363.022arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)181194429931359530Rat
61375Bp41Blood pressure QTL 412.4blood pressure trait (VT:0000183)systolic blood pressure (CMO:0000004)181194429941122201Rat
1331753Bp231Blood pressure QTL 2313.643arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)181194429952293055Rat
1358358Sradr6Stress Responsive Adrenal Weight QTL 62.49adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)181194429959330563Rat
6903359Bp355Blood pressure QTL 3553.6arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)181194454459796478Rat
70178EaezExperimental allergic encephalomyelitis QTL z2.4nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis severity score (CMO:0001419)181235778612874620Rat
2313082Bss85Bone structure and strength QTL 850.80.0001long bone metaphysis morphology trait (VT:0000133)tibia midshaft total cross-sectional area (CMO:0001715)181495133759951337Rat
1358193Emca2Estrogen-induced mammary cancer QTL 21.6mammary gland integrity trait (VT:0010552)post-insult time to mammary tumor formation (CMO:0000345)181800759963571040Rat
1331735Rf44Renal function QTL 442.981total urine protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)181823456431359530Rat
1331775Bp235Blood pressure QTL 2353.201arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)181823456431359530Rat
1600373Mamtr6Mammary tumor resistance QTL 6mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)181927890183218561Rat
1331741Bp232Blood pressure QTL 2323.59112arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)182137289383213037Rat
1641923Colcr8Colorectal carcinoma resistance QTL 83.10.0014intestine integrity trait (VT:0010554)poorly differentiated malignant colorectal tumor number (CMO:0002076)182206624252293055Rat
1331733Bp233Blood pressure QTL 2333.97196arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)182479697779788953Rat
2325839Bp348Blood pressure QTL 3480.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)182557098570570985Rat
12904673Cm127Cardiac mass QTL 1270.005heart right ventricle mass (VT:0007033)heart right ventricle weight to body weight ratio (CMO:0000914)182654808246969551Rat
12904675Am19Aortic mass QTL 190.001aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)182654808246969551Rat
12904677Kidm72Kidney mass QTL 720.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)182654808246969551Rat
12904668Bw188Body weight QTL 1880.03body mass (VT:0001259)body weight (CMO:0000012)182654808246969551Rat
12904669Cm125Cardiac mass QTL 1250.001heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)182654808246969551Rat
12904670Cm126Cardiac mass QTL 1260.001heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)182654808246969551Rat
2301413Bp318Blood pressure QTL 3180.002arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)182654808246969551Rat
2293704Bss35Bone structure and strength QTL 354.590.0002femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)182896485373964853Rat
2300157Bmd66Bone mineral density QTL 6613.10.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)182896485373964853Rat
2300177Bmd65Bone mineral density QTL 6519.70.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)182896485373964853Rat
9589816Gluco68Glucose level QTL 687.250.001blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)182979296574792965Rat
8694378Bw157Body weight QTL 1573.590.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)182979296574792965Rat
9590318Scort22Serum corticosterone level QTL 227.640.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)182979296574792965Rat
1331754Bp230Blood pressure QTL 2304.61609arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)182979296574792965Rat
738005Anxrr11Anxiety related response QTL 113.4exploratory behavior trait (VT:0010471)number of entries into a discrete space in an experimental apparatus (CMO:0000960)183003981375039813Rat
61383Bp47Blood pressure QTL 4717.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)183127168160377755Rat
1331742Bp228Blood pressure QTL 2283.88752arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)183135940859796643Rat
1331774Bp226Blood pressure QTL 2264.41065arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)183135940859796643Rat
1331776Bp225Blood pressure QTL 2252.829arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)183135940859796643Rat
1331798Bp224Blood pressure QTL 2243.53873arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)183135940859796643Rat
1331727Bp237Blood pressure QTL 2373.053arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)183135940861698465Rat
61429Cia17Collagen induced arthritis QTL 174.6joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)183135940870263868Rat
2303120Mamtr8Mammary tumor resistance QTL 80.001mammary gland integrity trait (VT:0010552)mammary tumor growth rate (CMO:0000344)183135940883218561Rat
6903347Bp350Blood pressure QTL 3504.4arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)183135953059796478Rat
631274Sprol1Serum protein level QTL 15.3blood total protein amount (VT:0005567)serum total protein level (CMO:0000661)183139332077209694Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_cross_type intercross  
qtl_general measurement method: at 26 weeks of age femur was removed and frozen at -20oC, later it was scanned using a fan-beam Hologic QDR 4500A DXA machine with Hologic version 11.2:3 software 2300109
qtl_general software package: R/qtl software 2300109
qtl_general number of animals used: 405 males and 423 females from F2 progeny 2300109