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Gene: Epg5 (ectopic P-granules autophagy protein 5 homolog) Rattus norvegicus
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Symbol: Epg5
Name: ectopic P-granules autophagy protein 5 homolog
Description: Predicted to be involved in several processes, including autophagosome maturation; cellular response to dsDNA; and toll-like receptor 9 signaling pathway. Predicted to localize to lysosome and perinuclear region of cytoplasm. Human ortholog(s) of this gene implicated in Vici syndrome. Orthologous to human EPG5 (ectopic P-granules autophagy protein 5 homolog); INTERACTS WITH 17alpha-ethynylestradiol; 2,3,7,8-Tetrachlorodibenzofuran; bisphenol A.
Type: protein-coding
RefSeq Status: MODEL
Also known as: ectopic P granules protein 5 homolog; ectopic P-granules autophagy protein 5 homolog (C. elegans); LOC364902; RGD1306286; similar to mKIAA1632 protein
Orthologs:
Homo sapiens (human) : EPG5 (ectopic P-granules autophagy protein 5 homolog)  HGNC  Alliance
Mus musculus (house mouse) : Epg5 (ectopic P-granules autophagy protein 5 homolog (C. elegans))  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Epg5 (ectopic P-granules autophagy protein 5 homolog)
Pan paniscus (bonobo/pygmy chimpanzee) : EPG5 (ectopic P-granules autophagy protein 5 homolog)
Canis lupus familiaris (dog) : EPG5 (ectopic P-granules autophagy protein 5 homolog)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Epg5 (ectopic P-granules autophagy protein 5 homolog)
Sus scrofa (pig) : EPG5 (ectopic P-granules autophagy protein 5 homolog)
Chlorocebus sabaeus (African green monkey) : EPG5 (ectopic P-granules autophagy protein 5 homolog)
Heterocephalus glaber (naked mole-rat) : Epg5 (ectopic P-granules autophagy protein 5 homolog)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01874,299,965 - 74,397,115 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1874,299,931 - 74,395,547 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01873,973,419 - 74,064,981 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41874,846,785 - 74,942,842 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11874,920,057 - 75,015,543 (+)NCBI
Celera1869,922,960 - 70,020,206 (+)NCBICelera
Cytogenetic Map18q12.3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Epg5
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1306286
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.