D18Chm97 Marker Search Result - Rat Genome Database

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Marker: D18Chm97

Symbol: D18Chm97
Previously known as:
RGD ID: 1579127
Expected Size: 218 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21858,085,512 - 58,085,730 (+)MAPPERmRatBN7.2
Rnor_6.01860,081,657 - 60,081,874NCBIRnor6.0
Rnor_5.01859,291,816 - 59,292,033UniSTSRnor5.0
RGSC_v3.41860,815,969 - 60,816,186UniSTSRGSC3.4
Celera1856,222,551 - 56,222,768UniSTS
Cytogenetic Map18q12.1UniSTS
Is Marker For: Genes:   Atp8b1  




#
Reference Title
Reference Citation
1. A loss of genome buffering capacity of Dahl salt-sensitive model to modulate blood pressure as a cause of hypertension. Charron S, etal., Hum Mol Genet. 2005 Dec 15;14(24):3877-84. Epub 2005 Nov 8.
2. UniSTS Pipeline RGD automated pipelines


 
Forward Primer GGATGGCTGCAGGTTTAGTC
Reverse Primer GCTTTCTTCTGGCCTGTCTG
 
Template 
TGAGTTGGCCTGTAATTCCAGCACTCAAAAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCA
GAGGCAGAGGGATGGCTGCAGGTTTAGTCTAACCGGTCTATCTATTTAGCATGTTCCTGGCTCA
TCAGGGCTACACAGTAACATCTTGTCTCAAAACAGAAAGCACACACACACACACACACACACAC
ACACACACACACACACACACACACACACACACAAATAACCCAAATTAAAAAATAAGAGAGAACT
AAAATGGAAGAAAGACAGACAGGCCAGAAGAAAGCTGAAAGGGGAAGTAGAGGCAGGAGGGAAG
AAGCGCTGTGCTCTGACGGCCAGCCTAACGGGCACACCCAATGGAAGTCACCTCAATGAAAACT
GTAGCAGTACCACCAGCCACATCTTCTGAAGGGCTCTGACATGTGCCTGGGAGGGAGTCAAGCT
GACCCCGGGTAGGAGATGGGGGAATTAAGAGATGTCAGCCCATCCTTCCTAAGTCATCGGGAAG
ACTCCAGCCCACCTCAGGTCTCTCAGCCCACCTAGGCTGCATCCTTCCACTCTGGTATAGGTCT
AGCATTGGGACTGCTTTGCCACCAGGCTACAACGGGAGGAACGGAAGATGCCCATTAGCTCCTA
GAAGGAGCCTCAGGGAAGGA


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1308488Atp8b1ATPase phospholipid transporting 8B1185801638258157213Rat
GenBank Nucleotide CH473971 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000248 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


1 to 10 of 62 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1331733Bp233Blood pressure QTL 2333.97196arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)182479697779788953Rat
1358358Sradr6Stress Responsive Adrenal Weight QTL 62.49adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)181194429959330563Rat
1331730Scl27Serum cholesterol level QTL 273.826blood HDL cholesterol amount (VT:0000184)serum high density lipoprotein cholesterol level (CMO:0000361)185229287559796643Rat
1331741Bp232Blood pressure QTL 2323.59112arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)182137289383213037Rat
1331742Bp228Blood pressure QTL 2283.88752arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)183135940859796643Rat
1298072Cia26Collagen induced arthritis QTL 263.6joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)185470976983828827Rat
1331736Bp227Blood pressure QTL 2272.791arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)184671876359796643Rat
1300125Rf26Renal function QTL 263.2urine potassium amount (VT:0010539)urine potassium excretion rate (CMO:0000761)185253986365844950Rat
6893683Bw110Body weight QTL 1102.70.002body mass (VT:0001259)body weight (CMO:0000012)184334502283828827Rat
1331727Bp237Blood pressure QTL 2373.053arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)183135940861698465Rat

1 to 10 of 62 rows


Database
Acc Id
Source(s)
NCBI Gene 291555 UniSTS