Csnk1g3 (casein kinase 1, gamma 3) - Rat Genome Database

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Gene: Csnk1g3 (casein kinase 1, gamma 3) Rattus norvegicus
Analyze
Symbol: Csnk1g3
Name: casein kinase 1, gamma 3
RGD ID: 621408
Description: Enables protein serine/threonine kinase activity. Involved in protein autophosphorylation. Predicted to be active in cytoplasm; nucleus; and plasma membrane. Orthologous to human CSNK1G3 (casein kinase 1 gamma 3); PARTICIPATES IN Hedgehog signaling pathway; p53 signaling pathway; INTERACTS WITH (+)-schisandrin B; 2,3,7,8-tetrachlorodibenzodioxine; 2,6-dinitrotoluene.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: casein kinase 1 gamma 3 isoform; casein kinase I isoform gamma-3; CKI-gamma 3
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21847,287,466 - 47,386,538 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1847,299,579 - 47,386,535 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1849,359,291 - 49,446,305 (+)NCBIRnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.01850,060,155 - 50,147,419 (+)NCBIRnor_SHRSP
UTH_Rnor_WKY_Bbb_1.01847,865,239 - 47,952,264 (+)NCBIRnor_WKY
Rnor_6.01848,831,209 - 48,913,341 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1848,853,418 - 48,911,122 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01848,043,786 - 48,126,393 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41849,369,579 - 49,451,893 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11849,428,864 - 49,487,465 (+)NCBI
Celera1845,466,118 - 45,564,958 (+)NCBICelera
Cytogenetic Map18q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cytoplasm  (IEA)
nucleus  (IBA)
plasma membrane  (IBA)

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
3. KEGG: Kyoto Encyclopedia of Genes and Genomes KEGG
4. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
5. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
6. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
7. PID Annotation Import Pipeline Pipeline to import Pathway Interaction Database annotations from NCI into RGD
8. GOA pipeline RGD automated data pipeline
9. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
10. Casein kinase I gamma subfamily. Molecular cloning, expression, and characterization of three mammalian isoforms and complementation of defects in the Saccharomyces cerevisiae YCK genes. Zhai L, etal., J Biol Chem 1995 May 26;270(21):12717-24.
Additional References at PubMed
PMID:8889548   PMID:11744621   PMID:25500533  


Genomics

Comparative Map Data
Csnk1g3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21847,287,466 - 47,386,538 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1847,299,579 - 47,386,535 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1849,359,291 - 49,446,305 (+)NCBIRnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.01850,060,155 - 50,147,419 (+)NCBIRnor_SHRSP
UTH_Rnor_WKY_Bbb_1.01847,865,239 - 47,952,264 (+)NCBIRnor_WKY
Rnor_6.01848,831,209 - 48,913,341 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1848,853,418 - 48,911,122 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01848,043,786 - 48,126,393 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41849,369,579 - 49,451,893 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11849,428,864 - 49,487,465 (+)NCBI
Celera1845,466,118 - 45,564,958 (+)NCBICelera
Cytogenetic Map18q11NCBI
CSNK1G3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh385123,512,177 - 123,617,049 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl5123,512,177 - 123,617,049 (+)EnsemblGRCh38hg38GRCh38
GRCh375122,847,871 - 122,952,743 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 365122,875,692 - 122,980,364 (+)NCBINCBI36Build 36hg18NCBI36
Build 345122,909,226 - 122,979,039NCBI
Celera5118,803,181 - 118,907,853 (+)NCBICelera
Cytogenetic Map5q23.2NCBI
HuRef5118,036,056 - 118,141,228 (+)NCBIHuRef
CHM1_15122,280,390 - 122,385,357 (+)NCBICHM1_1
T2T-CHM13v2.05124,028,409 - 124,133,283 (+)NCBIT2T-CHM13v2.0
Csnk1g3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391853,995,154 - 54,088,756 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1853,995,194 - 54,088,620 (+)EnsemblGRCm39 Ensembl
GRCm381853,862,082 - 53,955,684 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1853,862,122 - 53,955,548 (+)EnsemblGRCm38mm10GRCm38
MGSCv371854,021,767 - 54,115,338 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361854,032,013 - 54,080,917 (+)NCBIMGSCv36mm8
Celera1855,159,385 - 55,248,672 (+)NCBICelera
Cytogenetic Map18D1- D2NCBI
Csnk1g3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555211,660,090 - 1,721,874 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555211,660,090 - 1,721,811 (+)NCBIChiLan1.0ChiLan1.0
CSNK1G3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan15116,949,663 - 117,056,936 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v05118,903,016 - 119,008,030 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.15124,683,567 - 124,786,916 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl5124,683,566 - 124,786,916 (+)Ensemblpanpan1.1panPan2
CSNK1G3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11113,357,816 - 13,465,708 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1113,357,894 - 13,464,138 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1112,138,614 - 12,246,367 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01114,062,805 - 14,170,567 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1114,062,781 - 14,170,558 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11112,804,383 - 12,912,563 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01112,651,006 - 12,759,159 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01113,253,204 - 13,361,087 (+)NCBIUU_Cfam_GSD_1.0
Csnk1g3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213135,797,432 - 135,888,149 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365753,878,604 - 3,965,758 (+)EnsemblSpeTri2.0
SpeTri2.0NW_0049365753,858,996 - 3,965,758 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CSNK1G3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl2127,017,026 - 127,129,543 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.12127,013,736 - 127,129,547 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.22132,404,785 - 132,482,848 (+)NCBISscrofa10.2Sscrofa10.2susScr3
CSNK1G3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12326,555,606 - 26,659,412 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2326,588,776 - 26,657,048 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603451,464,061 - 51,568,783 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Csnk1g3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462477418,384,941 - 18,494,964 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462477418,383,645 - 18,495,013 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Csnk1g3
284 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1066
Count of miRNA genes:325
Interacting mature miRNAs:453
Transcripts:ENSRNOT00000022792
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2299160Iddm35Insulin dependent diabetes mellitus QTL 352.79blood glucose amount (VT:0000188)age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)18420794160377792Rat
2293708Bss46Bone structure and strength QTL 468.80.0001lumbar vertebra morphology trait (VT:0010494)lumbar vertebra cortical cross-sectional area (CMO:0001690)181179151863636873Rat
1578661Bss20Bone structure and strength QTL 203.7femur morphology trait (VT:0000559)femoral neck cross-sectional area (CMO:0001697)181179151883218561Rat
1578667Bss21Bone structure and strength QTL 213.5femur morphology trait (VT:0000559)femoral neck cortical cross-sectional area (CMO:0001702)181179151883218561Rat
1331753Bp231Blood pressure QTL 2313.643arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)181194429952293055Rat
1358358Sradr6Stress Responsive Adrenal Weight QTL 62.49adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)181194429959330563Rat
6903359Bp355Blood pressure QTL 3553.6arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)181194454459796478Rat
2313082Bss85Bone structure and strength QTL 850.80.0001long bone metaphysis morphology trait (VT:0000133)tibia midshaft total cross-sectional area (CMO:0001715)181495133759951337Rat
1358193Emca2Estrogen-induced mammary cancer QTL 21.6mammary gland integrity trait (VT:0010552)post-insult time to mammary tumor formation (CMO:0000345)181800759963571040Rat
1600373Mamtr6Mammary tumor resistance QTL 6mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)181927890183218561Rat
1331741Bp232Blood pressure QTL 2323.59112arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)182137289383213037Rat
1641923Colcr8Colorectal carcinoma resistance QTL 83.10.0014intestine integrity trait (VT:0010554)poorly differentiated malignant colorectal tumor number (CMO:0002076)182206624252293055Rat
1331733Bp233Blood pressure QTL 2333.97196arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)182479697779788953Rat
2325839Bp348Blood pressure QTL 3480.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)182557098570570985Rat
2293704Bss35Bone structure and strength QTL 354.590.0002femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)182896485373964853Rat
2300157Bmd66Bone mineral density QTL 6613.10.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)182896485373964853Rat
2300177Bmd65Bone mineral density QTL 6519.70.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)182896485373964853Rat
9589816Gluco68Glucose level QTL 687.250.001blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)182979296574792965Rat
8694378Bw157Body weight QTL 1573.590.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)182979296574792965Rat
9590318Scort22Serum corticosterone level QTL 227.640.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)182979296574792965Rat
1331754Bp230Blood pressure QTL 2304.61609arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)182979296574792965Rat
738005Anxrr11Anxiety related response QTL 113.4exploratory behavior trait (VT:0010471)number of entries into a discrete space in an experimental apparatus (CMO:0000960)183003981375039813Rat
61383Bp47Blood pressure QTL 4717.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)183127168160377755Rat
1331742Bp228Blood pressure QTL 2283.88752arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)183135940859796643Rat
1331774Bp226Blood pressure QTL 2264.41065arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)183135940859796643Rat
1331776Bp225Blood pressure QTL 2252.829arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)183135940859796643Rat
1331798Bp224Blood pressure QTL 2243.53873arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)183135940859796643Rat
1331727Bp237Blood pressure QTL 2373.053arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)183135940861698465Rat
61429Cia17Collagen induced arthritis QTL 174.6joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)183135940870263868Rat
2303120Mamtr8Mammary tumor resistance QTL 80.001mammary gland integrity trait (VT:0010552)mammary tumor growth rate (CMO:0000344)183135940883218561Rat
6903347Bp350Blood pressure QTL 3504.4arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)183135953059796478Rat
631274Sprol1Serum protein level QTL 15.3blood total protein amount (VT:0005567)serum total protein level (CMO:0000661)183139332077209694Rat
631518Bw11Body weight QTL 112.8body mass (VT:0001259)body weight (CMO:0000012)183587072380870723Rat
61367Iddm4Insulin dependent diabetes mellitus QTL 42.330.0074blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)183819245583192455Rat
1598826Anxrr20Anxiety related response QTL 203.04body movement coordination trait (VT:0005424)number of rearing movements in an experimental apparatus (CMO:0001752)184143297183828827Rat
6893683Bw110Body weight QTL 1102.70.002body mass (VT:0001259)body weight (CMO:0000012)184334502283828827Rat
8694366Abfw8Abdominal fat weight QTL 86.380.001visceral adipose mass (VT:0010063)abdominal fat pad weight to body weight ratio (CMO:0000095)184664067583828827Rat
8694432Bw165Body weight QTL 1653.810.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)184664067583828827Rat
9589041Epfw12Epididymal fat weight QTL 1217.080.001epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)184664067583828827Rat
1331806Bp229Blood pressure QTL 2294.36484arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)184671876357867167Rat
1331736Bp227Blood pressure QTL 2272.791arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)184671876359796643Rat
1331780Bp238Blood pressure QTL 2383.269arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)184671876359796643Rat
6903345Bp349Blood pressure QTL 3493.9arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)184671893559796478Rat
6903349Bp351Blood pressure QTL 3513.5arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)184671893559796478Rat
6903351Bp352Blood pressure QTL 3523.3arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)184671893559796478Rat
61360EaeyExperimental allergic encephalomyelitis QTL y3nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis duration (CMO:0001424)184698893960377753Rat

Markers in Region
RH133872  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21847,385,035 - 47,385,232 (+)MAPPERmRatBN7.2
Rnor_6.01848,911,839 - 48,912,035NCBIRnor6.0
Rnor_5.01848,124,891 - 48,125,087UniSTSRnor5.0
RGSC_v3.41849,450,391 - 49,450,587UniSTSRGSC3.4
Celera1845,563,456 - 45,563,652UniSTS
Cytogenetic Map18q11UniSTS
BE110749  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21847,334,582 - 47,334,796 (+)MAPPERmRatBN7.2
Rnor_6.01848,862,446 - 48,862,659NCBIRnor6.0
Rnor_5.01848,075,023 - 48,075,236UniSTSRnor5.0
RGSC_v3.41849,400,519 - 49,400,732UniSTSRGSC3.4
Celera1845,513,223 - 45,513,436UniSTS
Cytogenetic Map18q11UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 3 41 54 38 19 38 8 10 74 35 38 11 8
Low 2 3 3 3 1 3
Below cutoff

Sequence


Reference Sequences
RefSeq Acc Id: ENSRNOT00000022792   ⟹   ENSRNOP00000022792
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1847,299,579 - 47,378,433 (+)Ensembl
Rnor_6.0 Ensembl1848,853,418 - 48,911,122 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000098391   ⟹   ENSRNOP00000079920
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1847,299,579 - 47,385,299 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000101548   ⟹   ENSRNOP00000096330
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1847,299,579 - 47,361,030 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000103210   ⟹   ENSRNOP00000093418
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1847,299,579 - 47,386,535 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000111040   ⟹   ENSRNOP00000097230
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1847,299,579 - 47,386,535 (+)Ensembl
RefSeq Acc Id: NM_022855   ⟹   NP_074046
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.21847,287,466 - 47,386,538 (+)NCBI
Rnor_6.01848,831,209 - 48,913,341 (+)NCBI
Rnor_5.01848,043,786 - 48,126,393 (+)NCBI
RGSC_v3.41849,369,579 - 49,451,893 (+)RGD
Celera1845,466,118 - 45,564,958 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001380678 (Get FASTA)   NCBI Sequence Viewer  
  NP_001380679 (Get FASTA)   NCBI Sequence Viewer  
  NP_074046 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EDM14470 (Get FASTA)   NCBI Sequence Viewer  
  Q62763 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: NP_074046   ⟸   NM_022855
- UniProtKB: Q62763 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSRNOP00000022792   ⟸   ENSRNOT00000022792
RefSeq Acc Id: ENSRNOP00000097230   ⟸   ENSRNOT00000111040
RefSeq Acc Id: ENSRNOP00000093418   ⟸   ENSRNOT00000103210
RefSeq Acc Id: ENSRNOP00000079920   ⟸   ENSRNOT00000098391
RefSeq Acc Id: ENSRNOP00000096330   ⟸   ENSRNOT00000101548
Protein Domains
Protein kinase

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q62763-F1-model_v2 AlphaFold Q62763 1-448 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:621408 AgrOrtholog
BioCyc Gene G2FUF-7499 BioCyc
Ensembl Genes ENSRNOG00000016677 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSRNOP00000022792.6 UniProtKB/TrEMBL
  ENSRNOP00000079920.1 UniProtKB/TrEMBL
  ENSRNOP00000093418 ENTREZGENE
  ENSRNOP00000093418.1 UniProtKB/Swiss-Prot
  ENSRNOP00000096330.1 UniProtKB/TrEMBL
  ENSRNOP00000097230.1 UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000022792.6 UniProtKB/TrEMBL
  ENSRNOT00000098391.1 UniProtKB/TrEMBL
  ENSRNOT00000101548.1 UniProtKB/TrEMBL
  ENSRNOT00000103210 ENTREZGENE
  ENSRNOT00000103210.1 UniProtKB/Swiss-Prot
  ENSRNOT00000111040.1 UniProtKB/TrEMBL
Gene3D-CATH Transferase(Phosphotransferase) domain 1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Casein_kinase-1_gamma_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Kinase-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Prot_kinase_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Protein_kinase_ATP_BS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ser/Thr_kinase_AS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report rno:64823 UniProtKB/Swiss-Prot
NCBI Gene 64823 ENTREZGENE
PANTHER CASEIN KINASE I ISOFORM GAMMA-3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  CASEIN KINASE-RELATED UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam CK1gamma_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Pkinase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Csnk1g3 PhenoGen
PROSITE PROTEIN_KINASE_ATP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PROTEIN_KINASE_DOM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PROTEIN_KINASE_ST UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART S_TKc UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF56112 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0A0MXY3_RAT UniProtKB/TrEMBL
  A0A8I6APG1_RAT UniProtKB/TrEMBL
  A0A8I6AUP7 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6G3W6_RAT UniProtKB/TrEMBL
  KC1G3_RAT UniProtKB/Swiss-Prot, ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2004-09-10 Csnk1g3  casein kinase 1, gamma 3    casein kinase 1 gamma 3 isoform  Name updated 1299863 APPROVED
2002-08-07 Csnk1g3  casein kinase 1 gamma 3 isoform      Symbol and Name status set to provisional 70820 PROVISIONAL

RGD Curation Notes
Note Type Note Reference
gene_protein 448 amino acids; 51.4 kDa 727981