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Gene: Pdlim7 (PDZ and LIM domain 7) Rattus norvegicus
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Symbol: Pdlim7
Name: PDZ and LIM domain 7
Description: Predicted to have actin binding activity and muscle alpha-actinin binding activity. Involved in positive regulation of osteoblast differentiation. Predicted to localize to several cellular components, including the Z disc; actin cytoskeleton; and focal adhesion. Orthologous to human PDLIM7 (PDZ and LIM domain 7); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; ammonium chloride; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: Enigma; enigma (LIM domain protein); LIM mineralization protein; LIM mineralization protein 2; LMP; PDZ and LIM domain protein 7
Orthologs:
Homo sapiens (human) : PDLIM7 (PDZ and LIM domain 7)  HGNC  Alliance
Mus musculus (house mouse) : Pdlim7 (PDZ and LIM domain 7)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Pdlim7 (PDZ and LIM domain 7)
Pan paniscus (bonobo/pygmy chimpanzee) : PDLIM7 (PDZ and LIM domain 7)
Canis lupus familiaris (dog) : LOC491973 (PDZ and LIM domain protein 7-like)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Pdlim7 (PDZ and LIM domain 7)
Sus scrofa (pig) : PDLIM7 (PDZ and LIM domain 7)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0179,653,510 - 9,668,715 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl179,653,561 - 9,668,712 (+)Ensembl
Rnor_5.01711,762,249 - 11,777,443 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41715,168,835 - 15,183,983 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11715,168,834 - 15,183,983 (+)NCBI
Celera179,203,215 - 9,218,359 (+)NCBICelera
Cytogenetic Map17p14NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Pdlim7
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 628769
Created: 2003-02-27
Species: Rattus norvegicus
Last Modified: 2019-10-16
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.