Gene: Pbrm1 (polybromo 1) Rattus norvegicus
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Symbol: Pbrm1
Name: polybromo 1
Description: ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN blastocyst formation (ortholog); heart development (ortholog); negative regulation of cell population proliferation (ortholog); PARTICIPATES IN altered SWI/SNF family mediated chromatin remodeling pathway; histone modification pathway; pancreatic cancer pathway; ASSOCIATED WITH Left Ventricular Hypertrophy; cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN kinetochore (ortholog); nucleoplasm (ortholog); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; bisphenol A; chloroprene
AGR Description: Predicted to contribute to DNA translocase activity; predicted to be involved in several processes, including animal organ development, blastocyst formation, and chromatin organization; predicted to localize to the RSC-type complex, kinetochore, and nucleoplasm; orthologous to human PBRM1 (polybromo 1).
Merged Description: Predicted to contribute to DNA translocase activity; predicted to be involved in several processes, including animal organ development, blastocyst formation, and chromatin organization; predicted to localize to the RSC-type complex, kinetochore, and nucleoplasm; orthologous to human PBRM1 (polybromo 1); PARTICIPATES IN altered SWI/SNF family mediated chromatin remodeling pathway; histone modification pathway; pancreatic cancer pathway; INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; bisphenol A; chloroprene.
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC306254; RGD1565549; similar to polybromo-1
Orthologs:
Homo sapiens (human) : PBRM1 (polybromo 1)  HGNC  Alliance
Mus musculus (house mouse) : Pbrm1 (polybromo 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Pbrm1 (polybromo 1)
Pan paniscus (bonobo/pygmy chimpanzee) : PBRM1 (polybromo 1)
Canis lupus familiaris (dog) : PBRM1 (polybromo 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Pbrm1 (polybromo 1)
Sus scrofa (pig) : PBRM1 (polybromo 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0167,103,714 - 7,202,899 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0167,032,357 - 7,131,462 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4166,456,202 - 6,550,030 (+)NCBIRGSC3.4rn4RGSC3.4
Celera168,876,544 - 8,975,777 (-)NCBICelera
Cytogenetic Map16p16NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)