Gene: Lbx1 (ladybird homeobox 1) Rattus norvegicus
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Symbol: Lbx1
Name: ladybird homeobox 1
Description: ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); INVOLVED IN heart looping (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of neuron differentiation (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); split hand-foot malformation (ortholog); FOUND IN transcription factor complex (ortholog); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine (ortholog); aflatoxin B1 (ortholog); arsenite(3-) (ortholog)
AGR Description: Predicted to have DNA-binding transcription factor activity; predicted to be involved in animal organ development, negative regulation of cell population proliferation, and nervous system development; predicted to localize to the nucleus and transcription factor complex; orthologous to human LBX1 (ladybird homeobox 1).
Merged Description: Predicted to have DNA-binding transcription factor activity; predicted to be involved in animal organ development, negative regulation of cell population proliferation, and nervous system development; predicted to localize to the nucleus and transcription factor complex; orthologous to human LBX1 (ladybird homeobox 1); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine (ortholog); aflatoxin B1 (ortholog); arsenite(3-) (ortholog).
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: lady bird-like homeobox 1 homolog; ladybird homeobox homolog 1; ladybird homeobox homolog 1 (Drosophila); ladybird homeobox protein homolog 1; LOC499362; RGD1564197; similar to Lbx1; transcription factor LBX1
Orthologs:
Homo sapiens (human) : LBX1 (ladybird homeobox 1)  HGNC  Alliance
Mus musculus (house mouse) : Lbx1 (ladybird homeobox 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Lbx1 (ladybird homeobox 1)
Canis lupus familiaris (dog) : LBX1 (ladybird homeobox 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Lbx1 (ladybird homeobox 1)
Sus scrofa (pig) : LBX1 (ladybird homeobox 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01264,973,315 - 264,975,132 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01272,413,944 - 272,415,761 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41250,401,085 - 250,402,902 (-)NCBIRGSC3.4rn4RGSC3.4
Celera1239,894,852 - 239,896,669 (-)NCBICelera
Cytogenetic Map1q54NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Lbx1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1564197
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-04-12
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.