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Gene: Popdc3 (popeye domain containing 3) Rattus norvegicus
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Symbol: Popdc3
Name: popeye domain containing 3
Description: Predicted to have cAMP binding activity. Predicted to be involved in animal organ development; regulation of membrane potential; and striated muscle cell differentiation. Predicted to localize to sarcolemma. Human ortholog(s) of this gene implicated in autosomal recessive limb-girdle muscular dystrophy. Orthologous to human POPDC3 (popeye domain containing 3); INTERACTS WITH bisphenol A; 17beta-estradiol (ortholog); 2,2',4,4',5,5'-hexachlorobiphenyl (ortholog).
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC641520; popeye domain-containing 3; popeye domain-containing protein 3
Orthologs:
Homo sapiens (human) : POPDC3 (popeye domain containing 3)  HGNC  Alliance
Mus musculus (house mouse) : Popdc3 (popeye domain containing 3)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Popdc3 (popeye domain containing 3)
Pan paniscus (bonobo/pygmy chimpanzee) : POPDC3 (popeye domain containing 3)
Canis lupus familiaris (dog) : POPDC3 (popeye domain containing 3)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Popdc3 (popeye domain containing 3)
Sus scrofa (pig) : POPDC3 (popeye domain containing 3)
Chlorocebus sabaeus (African green monkey) : POPDC3 (popeye domain containing 3)
Heterocephalus glaber (naked mole-rat) : Popdc3 (popeye domain containing 3)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02050,394,617 - 50,422,551 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2050,394,650 - 50,422,560 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02052,006,146 - 52,033,991 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera2051,221,107 - 51,249,040 (-)NCBICelera
Cytogenetic Map20q13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Popdc3
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1590760
Created: 2006-11-20
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.