Hmga1 (high mobility group AT-hook 1)

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Gene: Hmga1 (high mobility group AT-hook 1) Rattus norvegicus

Analyze

Symbol:

Hmga1

Name:

high mobility group AT-hook 1

RGD ID:

628699

Description:

Predicted to enable several functions, including DNA-binding transcription activator activity, RNA polymerase II-specific; catalytic activity, acting on DNA; and nucleic acid binding activity. Predicted to be involved in several processes, including base-excision repair; oncogene-induced cell senescence; and regulation of DNA-templated transcription. Predicted to act upstream of or within spermatogenesis. Predicted to be located in male germ cell nucleus. Predicted to be part of RNA polymerase II transcription regulator complex and senescence-associated heterochromatin focus. Predicted to be active in nucleus. Human ortholog(s) of this gene implicated in type 2 diabetes mellitus. Orthologous to human HMGA1 (high mobility group AT-hook 1); PARTICIPATES IN interleukin-4 signaling pathway; INTERACTS WITH (+)-schisandrin B; 2,3,7,8-tetrachlorodibenzodioxine; 2-amino-2-deoxy-D-glucopyranose.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

high mobility group AT-hook protein 1; high mobility group protein A1; high mobility group protein HMG-I/HMG-Y; HMG-I(Y); Hmgi; Hmgiy; hypothetical protein LOC689053; LOC689053

RGD Orthologs

Human

Mouse

Chinchilla

Bonobo

Dog

Squirrel

Pig

Green Monkey

Naked Mole-Rat

Alliance Genes

More Info

more info ...

Related Pseudogenes:

Hmga1-ps2

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	20	5,611,088 - 5,618,755 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	20	5,611,694 - 5,618,752 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	20	6,327,117 - 6,330,067 (+)	NCBI	Rnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.0	20	5,688,869 - 5,691,819 (+)	NCBI	Rnor_SHRSP
UTH_Rnor_WKY_Bbb_1.0	20	6,169,005 - 6,171,956 (+)	NCBI	Rnor_WKY
Rnor_6.0	20	7,132,501 - 7,140,155 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	20	7,136,007 - 7,138,980 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	20	9,334,866 - 9,342,510 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	20	5,769,052 - 5,772,269 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	20	5,769,278 - 5,772,496 (+)	NCBI
Celera	20	7,177,471 - 7,180,533 (+)	NCBI		Celera
Cytogenetic Map	20	p12	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

genetic disease (ISO)

hyperglycemia (ISO)

Insulin Resistance (ISO)

JMP syndrome (ISO)

leiomyosarcoma (ISO)

lymphoma (ISS)

Metabolic Syndrome (ISO)

T-cell acute lymphoblastic leukemia (ISS)

type 2 diabetes mellitus (ISO)

uterine cancer (ISS)

Uterine Neoplasms (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(+)-schisandrin B (EXP)

(-)-epigallocatechin 3-gallate (ISO)

(S)-nicotine (ISO)

1,2-dimethylhydrazine (ISO)

17beta-estradiol (ISO)

2,2',4,4',5,5'-hexachlorobiphenyl (ISO)

2,2',5,5'-tetrachlorobiphenyl (ISO)

2,3',4,4',5-Pentachlorobiphenyl (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,3,7,8-Tetrachlorodibenzofuran (ISO)

2,3-dimethoxynaphthalene-1,4-dione (ISO)

2,4,6-tribromophenol (ISO)

2,4-diaminotoluene (ISO)

2,4-dibromophenyl 2,4,5-tribromophenyl ether (ISO)

2-amino-2-deoxy-D-glucopyranose (EXP)

2-butoxyethanol (ISO)

3,3',5,5'-tetrabromobisphenol A (ISO)

3-isobutyl-1-methyl-7H-xanthine (ISO)

3-methylcholanthrene (ISO)

4,4'-diaminodiphenylmethane (ISO)

4,4'-sulfonyldiphenol (ISO)

4-hydroxynon-2-enal (ISO)

4-hydroxyphenyl retinamide (ISO)

4-phenylbutyric acid (ISO)

5-azacytidine (ISO)

8-Br-cAMP (ISO)

acetamide (EXP)

acrolein (ISO)

acrylamide (EXP)

aflatoxin B1 (ISO)

aldehydo-D-glucosamine (EXP)

all-trans-retinoic acid (ISO)

alpha-pinene (ISO)

alvocidib (ISO)

ammonium chloride (EXP)

amphetamine (EXP)

antimony(0) (ISO)

aristolochic acid A (ISO)

arsenite(3-) (ISO)

arsenous acid (ISO)

benzo[a]pyrene (ISO)

benzo[b]fluoranthene (ISO)

Benzo[k]fluoranthene (ISO)

beta-D-glucosamine (EXP)

bisphenol A (EXP,ISO)

Bisphenol B (ISO)

bisphenol F (ISO)

Brodifacoum (EXP)

cadmium atom (ISO)

cadmium dichloride (EXP,ISO)

caffeine (ISO)

carbon nanotube (ISO)

CGP 52608 (ISO)

chlorpyrifos (EXP)

chromium atom (ISO)

cisplatin (ISO)

clofibrate (ISO)

cocaine (EXP)

copper atom (ISO)

copper(0) (ISO)

copper(II) sulfate (ISO)

coumarin (ISO)

coumestrol (ISO)

crocidolite asbestos (EXP,ISO)

cyclosporin A (ISO)

decabromodiphenyl ether (ISO)

dexamethasone (ISO)

diarsenic trioxide (ISO)

diethylstilbestrol (ISO)

dipotassium bis[mu-tartrato(4-)]diantimonate(2-) trihydrate (ISO)

endosulfan (EXP)

Enterolactone (ISO)

ethanol (ISO)

ethyl methanesulfonate (ISO)

Ethylenethiourea (EXP,ISO)

fenthion (ISO)

folic acid (ISO)

formaldehyde (ISO)

GW 4064 (ISO)

hydrogen peroxide (ISO)

indometacin (ISO)

ivermectin (ISO)

lipopolysaccharide (ISO)

methamphetamine (EXP,ISO)

methidathion (ISO)

methyl methanesulfonate (ISO)

mitomycin C (ISO)

N-nitrosodimethylamine (ISO)

nicotine (ISO)

O-methyleugenol (ISO)

ozone (ISO)

paracetamol (EXP,ISO)

paraquat (EXP)

PCB138 (ISO)

pepstatin A (ISO)

perfluorononanoic acid (ISO)

perfluorooctane-1-sulfonic acid (ISO)

perfluorooctanoic acid (ISO)

pirinixic acid (ISO)

potassium chromate (ISO)

potassium dichromate (ISO)

progesterone (ISO)

pterostilbene (ISO)

quercetin (ISO)

resveratrol (ISO)

SCH 23390 (EXP)

silicon dioxide (ISO)

sodium arsenite (ISO)

Soman (EXP)

sunitinib (ISO)

T-2 toxin (ISO)

tert-butyl hydroperoxide (ISO)

tetrachloromethane (EXP)

tetrahydropalmatine (ISO)

thimerosal (ISO)

thioacetamide (EXP)

topotecan (ISO)

tributylstannane (EXP)

trimellitic anhydride (ISO)

valproic acid (ISO)

vancomycin (ISO)

zinc atom (ISO)

zinc(0) (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

autophagy (ISO)

B cell differentiation (ISO)

base-excision repair (ISO)

cell population proliferation (ISO)

chromatin organization (ISO)

DNA-templated transcription (IEA,ISO)

erythrocyte differentiation (ISO)

gene expression (ISO)

glucose homeostasis (ISO)

heart development (ISO)

inflammatory cell apoptotic process (ISO)

inflammatory response (ISO)

insulin receptor signaling pathway (ISO)

insulin secretion (ISO)

lung morphogenesis (ISO)

lymphoid progenitor cell differentiation (ISO)

multicellular organism growth (ISO)

negative regulation of cell population proliferation (ISO,ISS)

negative regulation of DNA-templated transcription (ISO,ISS)

negative regulation of transcription by RNA polymerase II (ISO)

neurogenesis (ISO)

oncogene-induced cell senescence (ISO,ISS)

peroxisome proliferator activated receptor signaling pathway (ISO)

positive regulation of DNA-templated transcription (ISO,ISS)

positive regulation of transcription by RNA polymerase II (ISO)

protein kinase B signaling (ISO)

regulation of DNA-templated transcription (IBA,IEA)

respiratory system process (ISO)

response to cAMP (ISO)

response to glucagon (ISO)

response to glucose (ISO)

response to insulin (ISO)

response to wounding (ISO)

spermatogenesis (ISO)

T cell differentiation (ISO)

thyroid gland development (ISO)

Cellular Component

chromatin (IEA)

cytoplasm (ISO)

male germ cell nucleus (ISO)

mitochondrion (ISO)

nucleus (IBA,IEA,ISO,ISS)

RNA polymerase II transcription regulator complex (ISO)

senescence-associated heterochromatin focus (ISO,ISS)

SUMO ligase complex (ISO)

Molecular Function

5'-deoxyribose-5-phosphate lyase activity (ISO)

chromatin binding (ISO)

cis-regulatory region sequence-specific DNA binding (ISO)

D-loop DNA binding (ISO)

DNA binding (IEA,ISO)

DNA binding, bending (ISO)

DNA-(apurinic or apyrimidinic site) endonuclease activity (ISO)

DNA-binding transcription activator activity, RNA polymerase II-specific (ISO)

enzyme binding (ISO)

minor groove of adenine-thymine-rich DNA binding (ISO)

molecular adaptor activity (ISO)

molecular function activator activity (ISO)

nuclear receptor coactivator activity (ISO,ISS)

nuclear retinoic acid receptor binding (ISO,ISS)

nuclear retinoid X receptor binding (ISO,ISS)

peroxisome proliferator activated receptor binding (ISO,ISS)

protein binding (ISO)

RNA binding (ISO)

RNA polymerase II cis-regulatory region sequence-specific DNA binding (ISO)

RNA polymerase II core promoter sequence-specific DNA binding (ISO)

transcription coactivator activity (ISO)

transcription coregulator activity (IBA)

transcription coregulator binding (ISO,ISS)

Molecular Pathway Annotations Click to see Annotation Detail View

interleukin-4 signaling pathway (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Thyroid cell transformation requires the expression of the HMGA1 proteins.	Berlingieri MT, etal., Oncogene 2002 May 2;21(19):2971-80.
2.	Identification of high mobility group protein I(Y) as potential progression marker for prostate cancer by differential hybridization analysis.	Bussemakers MJ, etal., Cancer Res 1991 Jan 15;51(2):606-11.
3.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
4.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
5.	OMIM Disease Annotation Pipeline	OMIM Disease Annotation Pipeline
6.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
7.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:9253416	PMID:10428834	PMID:12032866	PMID:12653562	PMID:12874803	PMID:15192124	PMID:16157300	PMID:16641100	PMID:16791210	PMID:16901784	PMID:17005673	PMID:19389484
PMID:19465398	PMID:21423176	PMID:24680881	PMID:25002582	PMID:25557289	PMID:29634420	PMID:30414623	PMID:30652345	PMID:30720182	PMID:35216347

Genomics

Comparative Map Data

Hmga1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	20	5,611,088 - 5,618,755 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	20	5,611,694 - 5,618,752 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	20	6,327,117 - 6,330,067 (+)	NCBI	Rnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.0	20	5,688,869 - 5,691,819 (+)	NCBI	Rnor_SHRSP
UTH_Rnor_WKY_Bbb_1.0	20	6,169,005 - 6,171,956 (+)	NCBI	Rnor_WKY
Rnor_6.0	20	7,132,501 - 7,140,155 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	20	7,136,007 - 7,138,980 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	20	9,334,866 - 9,342,510 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	20	5,769,052 - 5,772,269 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	20	5,769,278 - 5,772,496 (+)	NCBI
Celera	20	7,177,471 - 7,180,533 (+)	NCBI		Celera
Cytogenetic Map	20	p12	NCBI

HMGA1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	6	34,236,873 - 34,246,231 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p13 Ensembl	6	34,236,873 - 34,246,231 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	6	34,204,650 - 34,214,008 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	6	34,312,628 - 34,321,986 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	6	34,314,545 - 34,321,986	NCBI
Celera	6	35,758,945 - 35,768,381 (+)	NCBI		Celera
Cytogenetic Map	6	p21.31	NCBI
HuRef	6	33,927,318 - 33,936,673 (+)	NCBI		HuRef
CHM1_1	6	34,207,231 - 34,216,597 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	6	34,060,576 - 34,069,936 (+)	NCBI		T2T-CHM13v2.0

Hmga1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	17	27,774,798 - 27,782,649 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	17	27,775,471 - 27,782,648 (+)	Ensembl		GRCm39 Ensembl
GRCm38	17	27,556,574 - 27,563,672 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	17	27,556,497 - 27,563,674 (+)	Ensembl	GRCm38		mm10	GRCm38
GRCm38.p6 Ensembl	11	120,762,794 - 120,764,419 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	17	27,693,519 - 27,700,617 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	17	27,284,171 - 27,291,260 (+)	NCBI		MGSCv36	mm8
Celera	17	28,108,639 - 28,115,776 (+)	NCBI		Celera
Cytogenetic Map	17	A3.3	NCBI
cM Map	17	14.5	NCBI

Hmga1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955437	2,478,414 - 2,486,809 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955437	2,478,414 - 2,486,809 (+)	NCBI	ChiLan1.0	ChiLan1.0

HMGA1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1	6	44,580,061 - 44,589,567 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	6	33,807,171 - 33,816,603 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	6	34,914,923 - 34,920,482 (+)	NCBI	panpan1.1	PanPan1.1	panPan2

HMGA1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	12	3,528,818 - 3,538,533 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	12	3,533,102 - 3,538,533 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	12	3,544,725 - 3,554,094 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	12	3,865,251 - 3,874,712 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	12	3,865,303 - 3,888,352 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	12	3,527,697 - 3,537,024 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	12	3,609,068 - 3,618,412 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	12	3,707,513 - 3,716,880 (+)	NCBI		UU_Cfam_GSD_1.0

Hmga1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404946	39,156,880 - 39,164,376 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936476	24,795,877 - 24,801,567 (-)	Ensembl	SpeTri2.0
SpeTri2.0	NW_004936476	24,795,854 - 24,803,138 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

HMGA1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	7	30,320,410 - 30,329,408 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	7	30,320,090 - 30,329,413 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	7	34,981,570 - 34,990,089 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3
Pig Cytomap	7	q11	NCBI

HMGA1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	17	37,848,110 - 37,857,835 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	17	37,849,412 - 37,853,880 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666044	34,150,889 - 34,160,977 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Hmga1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624754	22,892,226 - 22,898,807 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624754	22,888,052 - 22,900,685 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Hmga1
45 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	100
Count of miRNA genes:	80
Interacting mature miRNAs:	81
Transcripts:	ENSRNOT00000000580
Prediction methods:	Microtar, Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1354642	Despr15	Despair related QTL 15		0.0027	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	20	1	24159021	Rat
1600382	Edcs3	Endometrial carcinoma susceptibility QTL3	3.5	0.003	uterus morphology trait (VT:0001120)	percentage of study population developing endometrioid carcinoma during a period of time (CMO:0001759)	20	1	25159026	Rat
2317851	Alcrsp22	Alcohol response QTL 22	3.2	0.05	response to alcohol trait (VT:0010489)	duration of loss of righting reflex (CMO:0002289)	20	1	27339237	Rat
1641893	Alcrsp7	Alcohol response QTL 7			response to alcohol trait (VT:0010489)	duration of loss of righting reflex (CMO:0002289)	20	1	27339237	Rat
8694189	Bw153	Body weight QTL 153	3.13	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	20	1	29191651	Rat
9590275	Scort15	Serum corticosterone level QTL 15	3.48	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	20	1	29191651	Rat
7411650	Foco23	Food consumption QTL 23	20.7	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	20	1	29191651	Rat
9590109	Sffal8	Serum free fatty acids level QTL 8	5.32	0.01	blood free fatty acid amount (VT:0001553)	plasma free fatty acids level (CMO:0000546)	20	1	29191651	Rat
9589155	Insul32	Insulin level QTL 32	6.38	0.001	blood insulin amount (VT:0001560)	plasma insulin level (CMO:0000342)	20	1	29191651	Rat
6893685	Bw111	Body weight QTL 111	2.7	0.004	body mass (VT:0001259)	body weight (CMO:0000012)	20	1	32578807	Rat
7411668	Foco32	Food consumption QTL 32	8	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	20	1	36600972	Rat
9590252	Scort12	Serum corticosterone level QTL 12	20.46	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	20	1	36600972	Rat
2305926	Iddm37	Insulin dependent diabetes mellitus QTL 37	6		blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	20	1527842	46527842	Rat
1641915	Colcr9	Colorectal carcinoma resistance QTL 9	2.97	0.0024	intestine integrity trait (VT:0010554)	benign colorectal tumor number (CMO:0001795)	20	1530655	46530655	Rat
1598816	Memor12	Memory QTL 12	2.4		exploratory behavior trait (VT:0010471)	average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)	20	2606836	47606836	Rat
2317057	Aia27	Adjuvant induced arthritis QTL 27	2.83		joint integrity trait (VT:0010548)	right rear ankle joint diameter (CMO:0002150)	20	2892597	26381954	Rat
1300152	Bp195	Blood pressure QTL 195	3.46		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	20	3621649	9243559	Rat
1331772	Cdexp2	CD45RC expression in CD8 T cells QTL 2	5.7		CD8-positive T cell quantity (VT:0008077)	blood CD45RC(high) CD8 T cell count to CD45RC(low) CD8 T cell count ratio (CMO:0001990)	20	3621649	10078919	Rat
61432	Cia1	Collagen induced arthritis QTL 1			joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	20	3621656	14101050	Rat
61474	Eae1	Experimental allergic encephalomyelitis QTL 1	3		nervous system integrity trait (VT:0010566)	experimental autoimmune encephalomyelitis severity score (CMO:0001419)	20	4606607	6691706	Rat
4889857	Pur27	Proteinuria QTL 27	12.2	0.001	urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	20	4606607	17617956	Rat
1558640	Prcs2	Prostate cancer susceptibility QTL 2	3.3		prostate integrity trait (VT:0010571)	percentage of study population developing ventral prostate tumorous lesions during a period of time (CMO:0000943)	20	4606607	17617956	Rat

Markers in Region

RH128050

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	X	31,610,924 - 31,611,116 (+)	MAPPER	mRatBN7.2
mRatBN7.2	20	5,618,454 - 5,618,649 (+)	MAPPER	mRatBN7.2
Rnor_6.0	20	7,139,855 - 7,140,049	NCBI	Rnor6.0
Rnor_6.0	X	33,348,165 - 33,348,356	NCBI	Rnor6.0
Rnor_5.0	20	9,342,210 - 9,342,404	UniSTS	Rnor5.0
Rnor_5.0	X	33,695,628 - 33,695,819	UniSTS	Rnor5.0
RGSC_v3.4	X	52,351,648 - 52,351,839	UniSTS	RGSC3.4
RGSC_v3.4	20	5,773,144 - 5,773,338	UniSTS	RGSC3.4
Celera	20	7,181,408 - 7,181,602	UniSTS
Celera	X	31,924,692 - 31,924,883	UniSTS
RH 3.4 Map	20	76.95	UniSTS
Cytogenetic Map	20	p12	UniSTS

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	appendage
High			4	4		4			6		2
Medium	3	39	31	23	19	23		3	68	29	38	11
Low		4	22	14		14	8	8		6	1		8
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001412159	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_139327	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006256156	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006256157	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006256158	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006256162	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006256163	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006256164	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017601532	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039098388	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039098389	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC095263	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF507966	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF511040	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473988	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ225551	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ227331	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JACYVU010000324	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	X62875	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Reference Sequences

RefSeq Acc Id:

ENSRNOT00000000580 ⟹ ENSRNOP00000000580

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	20	5,611,694 - 5,618,622 (+)	Ensembl
Rnor_6.0 Ensembl	20	7,136,007 - 7,138,980 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000099939 ⟹ ENSRNOP00000082413

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	20	5,611,697 - 5,618,752 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000113836 ⟹ ENSRNOP00000086846

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	20	5,614,569 - 5,618,737 (+)	Ensembl

RefSeq Acc Id:

NM_139327 ⟹ NP_647543

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	20	5,614,605 - 5,617,580 (+)	NCBI
Rnor_6.0	20	7,136,007 - 7,138,980 (+)	NCBI
Rnor_5.0	20	9,334,866 - 9,342,510 (+)	NCBI
RGSC_v3.4	20	5,769,052 - 5,772,269 (+)	RGD
Celera	20	7,177,471 - 7,180,533 (+)	RGD

Sequence:

show sequence

ATGAGCGAGTCGGGCTCAAAGTCCAGCCAGCCCCTGGCCTCCAAGCAGGAAAAGGATGGGACTG
AGAAGCGAGGCCGGGGCAGGCCGCGCAAGCAGCCTTCGGTGAGTCCTGGGACGGCGCTGGTAGG
GAGTCAGAAGGAGCCCAGTGAAGTGCCAACCCCGAAGAGACCCCGGGGCCGGCCGAAGGGAAGC
AAGAACAAGGGCACAGCCAAGACGCGGAAAGTTACCACAACTCCGGGGAGGAAACCAAGGGGCA
GACCCAAGAAACTGGAGAAGGAGGAAGAGGAGGGCATCTCCCAGGAGTCCTCTGAGGAGGAGCA
GTGA

hide sequence

RefSeq Acc Id:

XM_006256156 ⟹ XP_006256218

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	20	5,611,598 - 5,618,755 (+)	NCBI
Rnor_6.0	20	7,133,039 - 7,140,155 (+)	NCBI
Rnor_5.0	20	9,334,866 - 9,342,510 (+)	NCBI

Sequence:

show sequence

GTCCCTCCCGCCCCTGGGTCGCTCTTTTTAAGCTCCCCTGAGCCGGGGCTGCGCTCCTCTAATT
GGGACTCCGAGTCGCGGCTATTTCTGGTGTTGGCGCGGCTCCAAGAAGGCAGCCAGACTCACTC
TGTGCTGCCCCACACATAGAGAAGCAGAATGAGCGAGTCGGTCTCAAAGTCCAGCCAGCCCCTG
GCCTCCAAGCAGGAAAAGGATGGGACTGAGAAGCGAGGCCGGGGCAGGCCGCGCAAGCAGCCTT
CGGTGAGTCCTGGGACGGCGCTGGTAGGGAGTCAGAAGGAGCCCAGTGAAGTGCCAACCCCGAA
GAGACCCCGGGGCCGGCCGAAGGGAAGCAAGAACAAGGGCACAGCCAAGACGCGGAAAGTTACC
ACAACTCCGGGGAGGAAACCAAGGGGCAGACCCAAGAAACTGGAGAAGGAGGAAGAGGAGGGCA
TCTCCCAGGAGTCCTCGGAGGAGGAGCAGTGACCACTTGCAGTGCCGCCTGCTCCTTGGCCACT
GAGGAGCGGCCTTCCCCTGGGACTGGAAGCCCTGCTCCCAGGCCCCGCCCCGCCCCCACTGCAC
ACTACCGCACCAGGCACCAGCTGCAGGCTCTGCGGCACCCACGGGAGCAGGATTTGGCTCAGTC
CCTGTGCCCTCCTCCCCAACACACCTGCCCCCTCCTGACAAGGTTAACTTCCCATCAAGCCGCA
GCCCAGCCTGCTGCGTGCCTCCCTCAGAGCCCTCGCTCTTAGCTCTCCGGGCGCTTTGTTTCGC
AGGTCCCTCCTGCCCTGCTGCTCCTGGCTTCCCTGTAGAGGGTCCTTGGAGCATTCCCTGGCCT
TAAGGGGCCACAGCCCCATCTCATTCCGACAAGCCCCGATGGCTGACCTGGCGGCAGCAGTGTG
GTCAGTGCAGGGGAAGCTTAGGTCCCAGCATGTATGTCCCCCATCAAGCGTCACCGGGTGGGTT
TCTCAGTCCCTCCTGCCCCACCCTACTGAGAATCCTGCACCAGGTTGGCTGAGCCCCTTGGCTG
GACAACAGGAAGTAGGATGGTGTTGGCTCCACCCACTTTGCTGCTCTTCCCTGGGACAAGACAG
ATGGGCGCTACCACCCATCTCGAGTGAGGTCCTGAGCACTTCCACCTAAGGCAGACGGGGCTCC
AACAGGCGCCTCCCCCACTACACTCTTCCTCTAGCAGGGCACCAAGGAGCTCGCCTTGCCCCCC
CTCTCCTTTTGCTCCTCCCTGCCCCCCAAGGTTCTGGTTCCACCTTTTCCTCTGTTCACAAACT
ACCTCTGGACAGTTGTGTTGTGTTTTTTGTTCAATGTTCATTCTTAGACACCCACCATTGCTGC
TACCAGCGCCAGATGTCCATCCTCCCGATTTTGCCTGTACCCCCCACACAATACACTCTAGGGG
AAGGGGGGGCTGGTGTGCAGCAGCAGGCTGGTTACCGAGTACCCCACGCTAGGGAAGATGGGGC
CCCCGCCCCGTGGATGCTGCAGCAGAGTGAGGAGGGGGGGCCCACTTGGATGGGAAAAGGGTAT
AGGACCACCTCCCCTTGTTGTGGGGGAGGGGTGGCCAGTATTTGTCCCAGCCTGGGGCTCCCCC
TCTGGTTTCCTATTTGCAGTTACTTGAATAAAAAAAAAATAGCCTTTTCTGGACA

hide sequence

RefSeq Acc Id:

XM_006256157 ⟹ XP_006256219

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	20	5,611,604 - 5,618,755 (+)	NCBI
Rnor_6.0	20	7,133,038 - 7,140,155 (+)	NCBI
Rnor_5.0	20	9,334,866 - 9,342,510 (+)	NCBI

Sequence:

show sequence

CGTCCCTCCCGCCCCTGGGTCGCTCTTTTTAAGCTCCCCTGAGCCGGGGCTGCGCTCCTCTAAT
TGGGACTCCGAGTCGCGGCTATTTCTGGTGTTGGCGCGGCTCCAAGAAGGCATCCGCATTTGCG
ACCGGCGGCGGCGGCAGAGCCCAGGCCGGTGCCCTGCGCCTAGCCCCGCCGCACCCGGCAGCCC
CGAGCGCGCCCCGCCGGCGGCCTGCGGAGCTCGCGAGCCAGACTCACTCTGTGCTGCCCCACAC
ATAGAGAAGCAGAATGAGCGAGTCGGTCTCAAAGTCCAGCCAGCCCCTGGCCTCCAAGCAGGAA
AAGGATGGGACTGAGAAGCGAGGCCGGGGCAGGCCGCGCAAGCAGCCTTCGGTGAGTCCTGGGA
CGGCGCTGGTAGGGAGTCAGAAGGAGCCCAGTGAAGTGCCAACCCCGAAGAGACCCCGGGGCCG
GCCGAAGGGAAGCAAGAACAAGGGCACAGCCAAGACGCGGAAAGTTACCACAACTCCGGGGAGG
AAACCAAGGGGCAGACCCAAGAAACTGGAGAAGGAGGAAGAGGAGGGCATCTCCCAGGAGTCCT
CGGAGGAGGAGCAGTGACCACTTGCAGTGCCGCCTGCTCCTTGGCCACTGAGGAGCGGCCTTCC
CCTGGGACTGGAAGCCCTGCTCCCAGGCCCCGCCCCGCCCCCACTGCACACTACCGCACCAGGC
ACCAGCTGCAGGCTCTGCGGCACCCACGGGAGCAGGATTTGGCTCAGTCCCTGTGCCCTCCTCC
CCAACACACCTGCCCCCTCCTGACAAGGTTAACTTCCCATCAAGCCGCAGCCCAGCCTGCTGCG
TGCCTCCCTCAGAGCCCTCGCTCTTAGCTCTCCGGGCGCTTTGTTTCGCAGGTCCCTCCTGCCC
TGCTGCTCCTGGCTTCCCTGTAGAGGGTCCTTGGAGCATTCCCTGGCCTTAAGGGGCCACAGCC
CCATCTCATTCCGACAAGCCCCGATGGCTGACCTGGCGGCAGCAGTGTGGTCAGTGCAGGGGAA
GCTTAGGTCCCAGCATGTATGTCCCCCATCAAGCGTCACCGGGTGGGTTTCTCAGTCCCTCCTG
CCCCACCCTACTGAGAATCCTGCACCAGGTTGGCTGAGCCCCTTGGCTGGACAACAGGAAGTAG
GATGGTGTTGGCTCCACCCACTTTGCTGCTCTTCCCTGGGACAAGACAGATGGGCGCTACCACC
CATCTCGAGTGAGGTCCTGAGCACTTCCACCTAAGGCAGACGGGGCTCCAACAGGCGCCTCCCC
CACTACACTCTTCCTCTAGCAGGGCACCAAGGAGCTCGCCTTGCCCCCCCTCTCCTTTTGCTCC
TCCCTGCCCCCCAAGGTTCTGGTTCCACCTTTTCCTCTGTTCACAAACTACCTCTGGACAGTTG
TGTTGTGTTTTTTGTTCAATGTTCATTCTTAGACACCCACCATTGCTGCTACCAGCGCCAGATG
TCCATCCTCCCGATTTTGCCTGTACCCCCCACACAATACACTCTAGGGGAAGGGGGGGCTGGTG
TGCAGCAGCAGGCTGGTTACCGAGTACCCCACGCTAGGGAAGATGGGGCCCCCGCCCCGTGGAT
GCTGCAGCAGAGTGAGGAGGGGGGGCCCACTTGGATGGGAAAAGGGTATAGGACCACCTCCCCT
TGTTGTGGGGGAGGGGTGGCCAGTATTTGTCCCAGCCTGGGGCTCCCCCTCTGGTTTCCTATTT
GCAGTTACTTGAATAAAAAAAAAATAGCCTTTTCTGGACA

hide sequence

RefSeq Acc Id:

XM_006256158 ⟹ XP_006256220

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	20	5,611,088 - 5,618,755 (+)	NCBI
Rnor_6.0	20	7,132,501 - 7,140,155 (+)	NCBI
Rnor_5.0	20	9,334,866 - 9,342,510 (+)	NCBI

Sequence:

show sequence

CCTGGGTGGCGGCCGTTACTAGATTTAAACCGTCGGCGTTTGCCAAGTTGCACGTTTGGATTTC
CCGAGACTTGTGTTTTCACGCGCCTTGAGGCCACCGGAGACGCACAGGCCGTCACCTGCTCGGC
GTCAAAGGAGCCAGACTCACTCTGTGCTGCCCCACACATAGAGAAGCAGAATGAGCGAGTCGGT
CTCAAAGTCCAGCCAGCCCCTGGCCTCCAAGCAGGAAAAGGATGGGACTGAGAAGCGAGGCCGG
GGCAGGCCGCGCAAGCAGCCTTCGGTGAGTCCTGGGACGGCGCTGGTAGGGAGTCAGAAGGAGC
CCAGTGAAGTGCCAACCCCGAAGAGACCCCGGGGCCGGCCGAAGGGAAGCAAGAACAAGGGCAC
AGCCAAGACGCGGAAAGTTACCACAACTCCGGGGAGGAAACCAAGGGGCAGACCCAAGAAACTG
GAGAAGGAGGAAGAGGAGGGCATCTCCCAGGAGTCCTCGGAGGAGGAGCAGTGACCACTTGCAG
TGCCGCCTGCTCCTTGGCCACTGAGGAGCGGCCTTCCCCTGGGACTGGAAGCCCTGCTCCCAGG
CCCCGCCCCGCCCCCACTGCACACTACCGCACCAGGCACCAGCTGCAGGCTCTGCGGCACCCAC
GGGAGCAGGATTTGGCTCAGTCCCTGTGCCCTCCTCCCCAACACACCTGCCCCCTCCTGACAAG
GTTAACTTCCCATCAAGCCGCAGCCCAGCCTGCTGCGTGCCTCCCTCAGAGCCCTCGCTCTTAG
CTCTCCGGGCGCTTTGTTTCGCAGGTCCCTCCTGCCCTGCTGCTCCTGGCTTCCCTGTAGAGGG
TCCTTGGAGCATTCCCTGGCCTTAAGGGGCCACAGCCCCATCTCATTCCGACAAGCCCCGATGG
CTGACCTGGCGGCAGCAGTGTGGTCAGTGCAGGGGAAGCTTAGGTCCCAGCATGTATGTCCCCC
ATCAAGCGTCACCGGGTGGGTTTCTCAGTCCCTCCTGCCCCACCCTACTGAGAATCCTGCACCA
GGTTGGCTGAGCCCCTTGGCTGGACAACAGGAAGTAGGATGGTGTTGGCTCCACCCACTTTGCT
GCTCTTCCCTGGGACAAGACAGATGGGCGCTACCACCCATCTCGAGTGAGGTCCTGAGCACTTC
CACCTAAGGCAGACGGGGCTCCAACAGGCGCCTCCCCCACTACACTCTTCCTCTAGCAGGGCAC
CAAGGAGCTCGCCTTGCCCCCCCTCTCCTTTTGCTCCTCCCTGCCCCCCAAGGTTCTGGTTCCA
CCTTTTCCTCTGTTCACAAACTACCTCTGGACAGTTGTGTTGTGTTTTTTGTTCAATGTTCATT
CTTAGACACCCACCATTGCTGCTACCAGCGCCAGATGTCCATCCTCCCGATTTTGCCTGTACCC
CCCACACAATACACTCTAGGGGAAGGGGGGGCTGGTGTGCAGCAGCAGGCTGGTTACCGAGTAC
CCCACGCTAGGGAAGATGGGGCCCCCGCCCCGTGGATGCTGCAGCAGAGTGAGGAGGGGGGGCC
CACTTGGATGGGAAAAGGGTATAGGACCACCTCCCCTTGTTGTGGGGGAGGGGTGGCCAGTATT
TGTCCCAGCCTGGGGCTCCCCCTCTGGTTTCCTATTTGCAGTTACTTGAATAAAAAAAAAATAG
CCTTTTCTGGACA

hide sequence

RefSeq Acc Id:

XM_006256162 ⟹ XP_006256224

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	20	5,611,089 - 5,618,755 (+)	NCBI
Rnor_6.0	20	7,132,503 - 7,140,155 (+)	NCBI
Rnor_5.0	20	9,334,866 - 9,342,510 (+)	NCBI

Sequence:

show sequence

TGGGTGGCGGCCGTTACTAGATTTAAACCGTCGGCGTTTGCCAAGTTGCACGTTTGGATTTCCC
GAGACTTGTGTTTTCACGCGCCTTGAGGCCACCGGAGACGCACAGGCCGTCACCTGCTCGGCGT
CAAAGGAGCCAGACTCACTCTGTGCTGCCCCACACATAGAGAAGCAGAATGAGCGAGTCGGTCT
CAAAGTCCAGCCAGCCCCTGGCCTCCAAGCAGGAAAAGGATGGGACTGAGAAGCGAGGCCGGGG
CAGGCCGCGCAAGCAGCCTTCGAAGGAGCCCAGTGAAGTGCCAACCCCGAAGAGACCCCGGGGC
CGGCCGAAGGGAAGCAAGAACAAGGGCACAGCCAAGACGCGGAAAGTTACCACAACTCCGGGGA
GGAAACCAAGGGGCAGACCCAAGAAACTGGAGAAGGAGGAAGAGGAGGGCATCTCCCAGGAGTC
CTCGGAGGAGGAGCAGTGACCACTTGCAGTGCCGCCTGCTCCTTGGCCACTGAGGAGCGGCCTT
CCCCTGGGACTGGAAGCCCTGCTCCCAGGCCCCGCCCCGCCCCCACTGCACACTACCGCACCAG
GCACCAGCTGCAGGCTCTGCGGCACCCACGGGAGCAGGATTTGGCTCAGTCCCTGTGCCCTCCT
CCCCAACACACCTGCCCCCTCCTGACAAGGTTAACTTCCCATCAAGCCGCAGCCCAGCCTGCTG
CGTGCCTCCCTCAGAGCCCTCGCTCTTAGCTCTCCGGGCGCTTTGTTTCGCAGGTCCCTCCTGC
CCTGCTGCTCCTGGCTTCCCTGTAGAGGGTCCTTGGAGCATTCCCTGGCCTTAAGGGGCCACAG
CCCCATCTCATTCCGACAAGCCCCGATGGCTGACCTGGCGGCAGCAGTGTGGTCAGTGCAGGGG
AAGCTTAGGTCCCAGCATGTATGTCCCCCATCAAGCGTCACCGGGTGGGTTTCTCAGTCCCTCC
TGCCCCACCCTACTGAGAATCCTGCACCAGGTTGGCTGAGCCCCTTGGCTGGACAACAGGAAGT
AGGATGGTGTTGGCTCCACCCACTTTGCTGCTCTTCCCTGGGACAAGACAGATGGGCGCTACCA
CCCATCTCGAGTGAGGTCCTGAGCACTTCCACCTAAGGCAGACGGGGCTCCAACAGGCGCCTCC
CCCACTACACTCTTCCTCTAGCAGGGCACCAAGGAGCTCGCCTTGCCCCCCCTCTCCTTTTGCT
CCTCCCTGCCCCCCAAGGTTCTGGTTCCACCTTTTCCTCTGTTCACAAACTACCTCTGGACAGT
TGTGTTGTGTTTTTTGTTCAATGTTCATTCTTAGACACCCACCATTGCTGCTACCAGCGCCAGA
TGTCCATCCTCCCGATTTTGCCTGTACCCCCCACACAATACACTCTAGGGGAAGGGGGGGCTGG
TGTGCAGCAGCAGGCTGGTTACCGAGTACCCCACGCTAGGGAAGATGGGGCCCCCGCCCCGTGG
ATGCTGCAGCAGAGTGAGGAGGGGGGGCCCACTTGGATGGGAAAAGGGTATAGGACCACCTCCC
CTTGTTGTGGGGGAGGGGTGGCCAGTATTTGTCCCAGCCTGGGGCTCCCCCTCTGGTTTCCTAT
TTGCAGTTACTTGAATAAAAAAAAAATAGCCTTTTCTGGACA

hide sequence

RefSeq Acc Id:

XM_006256163 ⟹ XP_006256225

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	20	5,612,372 - 5,618,755 (+)	NCBI
Rnor_6.0	20	7,133,946 - 7,140,155 (+)	NCBI
Rnor_5.0	20	9,334,866 - 9,342,510 (+)	NCBI

Sequence:

show sequence

CCCAGGGTAGTGCTGTGCGTAGAAGAGGCCGGATCGCGAGGGCCTGGGTTTTGGGGCTTCACCC
ACACACACACCTTTGGCCCTGCCCCGCGCCTCTTCAGCCCCCAGGGCCGGGCCTGCCCTCCGCC
CCCACAAACTGGTTCCTCTGCTTTGCTGGGTTCTGTTAGAACTAGTCCCTTGGACTCCCCGTTT
CTGCCCTCCCCCACCCCCGTTTTCAGGGAGGGAGGAGGGGGATTTTCTTCCTGCGACTCGCACC
AGGTTTCCTGCCCCCAAGGCGGGCTTTGGGTGCCCCCTCTGGCAGGAAGTGGGGCCGGGCGCAC
CCGCGTGGCGGTGCATGTGGTCGGGGTGCGCCGTTTCCCGCGCCTGCAGGGCCTGCGCCCCTCC
CCCTCGTCCTAGCTCCTAGAAGCGCCGGCCTACAACCGCCAGGCCGGGACGCTGGCGAAGGCAC
CCTCACTCCGGAGTAGAGGGCGCCAGGGTCTTAACCTGCTTCTCAGTAAACAAAGTGGCGGTCT
AGCCAGACTCACTCTGTGCTGCCCCACACATAGAGAAGCAGAATGAGCGAGTCGGTCTCAAAGT
CCAGCCAGCCCCTGGCCTCCAAGCAGGAAAAGGATGGGACTGAGAAGCGAGGCCGGGGCAGGCC
GCGCAAGCAGCCTTCGAAGGAGCCCAGTGAAGTGCCAACCCCGAAGAGACCCCGGGGCCGGCCG
AAGGGAAGCAAGAACAAGGGCACAGCCAAGACGCGGAAAGTTACCACAACTCCGGGGAGGAAAC
CAAGGGGCAGACCCAAGAAACTGGAGAAGGAGGAAGAGGAGGGCATCTCCCAGGAGTCCTCGGA
GGAGGAGCAGTGACCACTTGCAGTGCCGCCTGCTCCTTGGCCACTGAGGAGCGGCCTTCCCCTG
GGACTGGAAGCCCTGCTCCCAGGCCCCGCCCCGCCCCCACTGCACACTACCGCACCAGGCACCA
GCTGCAGGCTCTGCGGCACCCACGGGAGCAGGATTTGGCTCAGTCCCTGTGCCCTCCTCCCCAA
CACACCTGCCCCCTCCTGACAAGGTTAACTTCCCATCAAGCCGCAGCCCAGCCTGCTGCGTGCC
TCCCTCAGAGCCCTCGCTCTTAGCTCTCCGGGCGCTTTGTTTCGCAGGTCCCTCCTGCCCTGCT
GCTCCTGGCTTCCCTGTAGAGGGTCCTTGGAGCATTCCCTGGCCTTAAGGGGCCACAGCCCCAT
CTCATTCCGACAAGCCCCGATGGCTGACCTGGCGGCAGCAGTGTGGTCAGTGCAGGGGAAGCTT
AGGTCCCAGCATGTATGTCCCCCATCAAGCGTCACCGGGTGGGTTTCTCAGTCCCTCCTGCCCC
ACCCTACTGAGAATCCTGCACCAGGTTGGCTGAGCCCCTTGGCTGGACAACAGGAAGTAGGATG
GTGTTGGCTCCACCCACTTTGCTGCTCTTCCCTGGGACAAGACAGATGGGCGCTACCACCCATC
TCGAGTGAGGTCCTGAGCACTTCCACCTAAGGCAGACGGGGCTCCAACAGGCGCCTCCCCCACT
ACACTCTTCCTCTAGCAGGGCACCAAGGAGCTCGCCTTGCCCCCCCTCTCCTTTTGCTCCTCCC
TGCCCCCCAAGGTTCTGGTTCCACCTTTTCCTCTGTTCACAAACTACCTCTGGACAGTTGTGTT
GTGTTTTTTGTTCAATGTTCATTCTTAGACACCCACCATTGCTGCTACCAGCGCCAGATGTCCA
TCCTCCCGATTTTGCCTGTACCCCCCACACAATACACTCTAGGGGAAGGGGGGGCTGGTGTGCA
GCAGCAGGCTGGTTACCGAGTACCCCACGCTAGGGAAGATGGGGCCCCCGCCCCGTGGATGCTG
CAGCAGAGTGAGGAGGGGGGGCCCACTTGGATGGGAAAAGGGTATAGGACCACCTCCCCTTGTT
GTGGGGGAGGGGTGGCCAGTATTTGTCCCAGCCTGGGGCTCCCCCTCTGGTTTCCTATTTGCAG
TTACTTGAATAAAAAAAAAATAGCCTTTTCTGGACA

hide sequence

RefSeq Acc Id:

XM_006256164 ⟹ XP_006256226

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	20	5,611,598 - 5,617,614 (+)	NCBI
Rnor_6.0	20	7,133,023 - 7,140,153 (+)	NCBI
Rnor_5.0	20	9,334,866 - 9,342,510 (+)	NCBI

Sequence:

show sequence

TGGCGCGGGCGGGCCCGTCCCTCCCGCCCCTGGGTCGCTCTTTTTAAGCTCCCCTGAGCCGGGG
CTGCGCTCCTCTAATTGGGACTCCGAGTCGCGGCTATTTCTGGTGTTGGCGCGGCTCCAAGAAG
GCAGCCAGACTCACTCTGTGCTGCCCCACACATAGAGAAGCAGAATGAGCGAGTCGGTCTCAAA
GTCCAGCCAGCCCCTGGCCTCCAAGCAGGAAAAGGATGGGACTGAGAAGCGAGGCCGGGGCAGG
CCGCGCAAGCAGCCTTCGGTGAGTCCTGGGACGGCGCTGGTAGGGAGTCAGAAGGAGCCCAGTG
AAGTGCCAACCCCGAAGAGACCCCGGGGCCGGCCGAAGGGAAGCAAGAACAAGGGCACAGCCAA
GACGCGGTTACCACAACTCCGGGGAGGAAACCAAGGGGCAGACCCAAGAAACTGGAGAAGGAGG
AAGAGGAGGGCATCTCCCAGGAGTCCTCGGAGGAGGAGCAGTGACCACTTGCAGTGCCGCCTGC
TCCTTGGCCACTGAGGAGCGGCCTTCCCCTGGGACTGGAAGCCCTGCTCCCAGGCCCCGCCCCG
CCCCCACTGCACACTACCGCACCAGGCACCAGCTGCAGGCTCTGCGGCACCCACGGGAGCAGGA
TTTGGCTCAGTCCCTGTGCCCTCCTCCCCAACACACCTGCCCCCTCCTGACAAGGTTAACTTCC
CATCAAGCCGCAGCCCAGCCTGCTGCGTGCCTCCCTCAGAGCCCTCGCTCTTAGCTCTCCGGGC
GCTTTGTTTCGCAGGTCCCTCCTGCCCTGCTGCTCCTGGCTTCCCTGTAGAGGGTCCTTGGAGC
ATTCCCTGGCCTTAAGGGGCCACAGCCCCATCTCATTCCGACAAGCCCCGATGGCTGACCTGGC
GGCAGCAGTGTGGTCAGTGCAGGGGAAGCTTAGGTCCCAGCATGTATGTCCCCCATCAAGCGTC
ACCGGGTGGGTTTCTCAGTCCCTCCTGCCCCACCCTACTGAGAATCCTGCACCAGGTTGGCTGA
GCCCCTTGGCTGGACAACAGGAAGTAGGATGGTGTTGGCTCCACCCACTTTGCTGCTCTTCCCT
GGGACAAGACAGATGGGCGCTACCACCCATCTCGAGTGAGGTCCTGAGCACTTCCACCTAAGGC
AGACGGGGCTCCAACAGGCGCCTCCCCCACTACACTCTTCCTCTAGCAGGGCACCAAGGAGCTC
GCCTTGCCCCCCCTCTCCTTTTGCTCCTCCCTGCCCCCCAAGGTTCTGGTTCCACCTTTTCCTC
TGTTCACAAACTACCTCTGGACAGTTGTGTTGTGTTTTTTGTTCAATGTTCATTCTTAGACACC
CACCATTGCTGCTACCAGCGCCAGATGTCCATCCTCCCGATTTTGCCTGTACCCCCCACACAAT
ACACTCTAGGGGAAGGGGGGGCTGGTGTGCAGCAGCAGGCTGGTTACCGAGTACCCCACGCTAG
GGAAGATGGGGCCCCCGCCCCGTGGATGCTGCAGCAGAGTGAGGAGGGGGGGCCCACTTGGATG
GGAAAAGGGTATAGGACCACCTCCCCTTGTTGTGGGGGAGGGGTGGCCAGTATTTGTCCCAGCC
TGGGGCTCCCCCTCTGGTTTCCTATTTGCAGTTACTTGAATAAAAAAAAAATAGCCTTTTCTGG
A

hide sequence

RefSeq Acc Id:

XM_017601532 ⟹ XP_017457021

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	20	5,611,626 - 5,618,755 (+)	NCBI
Rnor_6.0	20	7,133,039 - 7,140,155 (+)	NCBI

Sequence:

show sequence

GTCCCTCCCGCCCCTGGGTCGCTCTTTTTAAGCTCCCCTGAGCCGGGGCTGCGCTCCTCTAATT
GGGACTCCGAGTCGCGGCTATTTCTGGTGTTGGCGCGGCTCCAAGAAGAGCCAGACTCACTCTG
TGCTGCCCCACACATAGAGAAGCAGAATGAGCGAGTCGGTCTCAAAGTCCAGCCAGCCCCTGGC
CTCCAAGCAGGAAAAGGATGGGACTGAGAAGCGAGGCCGGGGCAGGCCGCGCAAGCAGCCTTCG
AAGGAGCCCAGTGAAGTGCCAACCCCGAAGAGACCCCGGGGCCGGCCGAAGGGAAGCAAGAACA
AGGGCACAGCCAAGACGCGGAAAGTTACCACAACTCCGGGGAGGAAACCAAGGGGCAGACCCAA
GAAACTGGAGAAGGAGGAAGAGGAGGGCATCTCCCAGGAGTCCTCGGAGGAGGAGCAGTGACCA
CTTGCAGTGCCGCCTGCTCCTTGGCCACTGAGGAGCGGCCTTCCCCTGGGACTGGAAGCCCTGC
TCCCAGGCCCCGCCCCGCCCCCACTGCACACTACCGCACCAGGCACCAGCTGCAGGCTCTGCGG
CACCCACGGGAGCAGGATTTGGCTCAGTCCCTGTGCCCTCCTCCCCAACACACCTGCCCCCTCC
TGACAAGGTTAACTTCCCATCAAGCCGCAGCCCAGCCTGCTGCGTGCCTCCCTCAGAGCCCTCG
CTCTTAGCTCTCCGGGCGCTTTGTTTCGCAGGTCCCTCCTGCCCTGCTGCTCCTGGCTTCCCTG
TAGAGGGTCCTTGGAGCATTCCCTGGCCTTAAGGGGCCACAGCCCCATCTCATTCCGACAAGCC
CCGATGGCTGACCTGGCGGCAGCAGTGTGGTCAGTGCAGGGGAAGCTTAGGTCCCAGCATGTAT
GTCCCCCATCAAGCGTCACCGGGTGGGTTTCTCAGTCCCTCCTGCCCCACCCTACTGAGAATCC
TGCACCAGGTTGGCTGAGCCCCTTGGCTGGACAACAGGAAGTAGGATGGTGTTGGCTCCACCCA
CTTTGCTGCTCTTCCCTGGGACAAGACAGATGGGCGCTACCACCCATCTCGAGTGAGGTCCTGA
GCACTTCCACCTAAGGCAGACGGGGCTCCAACAGGCGCCTCCCCCACTACACTCTTCCTCTAGC
AGGGCACCAAGGAGCTCGCCTTGCCCCCCCTCTCCTTTTGCTCCTCCCTGCCCCCCAAGGTTCT
GGTTCCACCTTTTCCTCTGTTCACAAACTACCTCTGGACAGTTGTGTTGTGTTTTTTGTTCAAT
GTTCATTCTTAGACACCCACCATTGCTGCTACCAGCGCCAGATGTCCATCCTCCCGATTTTGCC
TGTACCCCCCACACAATACACTCTAGGGGAAGGGGGGGCTGGTGTGCAGCAGCAGGCTGGTTAC
CGAGTACCCCACGCTAGGGAAGATGGGGCCCCCGCCCCGTGGATGCTGCAGCAGAGTGAGGAGG
GGGGGCCCACTTGGATGGGAAAAGGGTATAGGACCACCTCCCCTTGTTGTGGGGGAGGGGTGGC
CAGTATTTGTCCCAGCCTGGGGCTCCCCCTCTGGTTTCCTATTTGCAGTTACTTGAATAAAAAA
AAAATAGCCTTTTCTGGACA

hide sequence

RefSeq Acc Id:

XM_039098388 ⟹ XP_038954316

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	20	5,612,372 - 5,618,755 (+)	NCBI

RefSeq Acc Id:

XM_039098389 ⟹ XP_038954317

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	20	5,613,077 - 5,618,755 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001399088	(Get FASTA)	NCBI Sequence Viewer
	NP_647543	(Get FASTA)	NCBI Sequence Viewer
	XP_006256218	(Get FASTA)	NCBI Sequence Viewer
	XP_006256219	(Get FASTA)	NCBI Sequence Viewer
	XP_006256220	(Get FASTA)	NCBI Sequence Viewer
	XP_006256224	(Get FASTA)	NCBI Sequence Viewer
	XP_006256225	(Get FASTA)	NCBI Sequence Viewer
	XP_006256226	(Get FASTA)	NCBI Sequence Viewer
	XP_017457021	(Get FASTA)	NCBI Sequence Viewer
	XP_038954316	(Get FASTA)	NCBI Sequence Viewer
	XP_038954317	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAM33433	(Get FASTA)	NCBI Sequence Viewer
	AAM74157	(Get FASTA)	NCBI Sequence Viewer
	EDL96887	(Get FASTA)	NCBI Sequence Viewer
	EDL96889	(Get FASTA)	NCBI Sequence Viewer
	Q8K585	(Get FASTA)	NCBI Sequence Viewer

Reference Sequences

RefSeq Acc Id:	NP_647543 ⟸ NM_139327
- UniProtKB:	Q8K1F5 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MSESGSKSSQPLASKQEKDGTEKRGRGRPRKQPSVSPGTALVGSQKEPSEVPTPKRPRGRPKGS KNKGTAKTRKVTTTPGRKPRGRPKKLEKEEEEGISQESSEEEQ hide sequence

RefSeq Acc Id:	XP_006256220 ⟸ XM_006256158
- Peptide Label:	isoform X1
- UniProtKB:	Q8K1F5 (UniProtKB/Swiss-Prot), Q8K585 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MSESVSKSSQPLASKQEKDGTEKRGRGRPRKQPSVSPGTALVGSQKEPSEVPTPKRPRGRPKGS KNKGTAKTRKVTTTPGRKPRGRPKKLEKEEEEGISQESSEEEQ hide sequence

RefSeq Acc Id:	XP_006256224 ⟸ XM_006256162
- Peptide Label:	isoform X2
- UniProtKB:	Q8K585 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MSESVSKSSQPLASKQEKDGTEKRGRGRPRKQPSKEPSEVPTPKRPRGRPKGSKNKGTAKTRKV TTTPGRKPRGRPKKLEKEEEEGISQESSEEEQ hide sequence

RefSeq Acc Id:	XP_006256226 ⟸ XM_006256164
- Peptide Label:	isoform X3
- Sequence:	show sequence MSESVSKSSQPLASKQEKDGTEKRGRGRPRKQPSVSPGTALVGSQKEPSEVPTPKRPRGRPKGS KNKGTAKTRLPQLRGGNQGADPRNWRRRKRRASPRSPRRRSSDHLQCRLLLGH hide sequence

RefSeq Acc Id:	XP_006256219 ⟸ XM_006256157
- Peptide Label:	isoform X1
- UniProtKB:	Q8K1F5 (UniProtKB/Swiss-Prot), Q8K585 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MSESVSKSSQPLASKQEKDGTEKRGRGRPRKQPSVSPGTALVGSQKEPSEVPTPKRPRGRPKGS KNKGTAKTRKVTTTPGRKPRGRPKKLEKEEEEGISQESSEEEQ hide sequence

RefSeq Acc Id:	XP_006256218 ⟸ XM_006256156
- Peptide Label:	isoform X1
- UniProtKB:	Q8K585 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MSESVSKSSQPLASKQEKDGTEKRGRGRPRKQPSVSPGTALVGSQKEPSEVPTPKRPRGRPKGS KNKGTAKTRKVTTTPGRKPRGRPKKLEKEEEEGISQESSEEEQ hide sequence

RefSeq Acc Id:	XP_006256225 ⟸ XM_006256163
- Peptide Label:	isoform X2
- UniProtKB:	Q8K585 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MSESVSKSSQPLASKQEKDGTEKRGRGRPRKQPSKEPSEVPTPKRPRGRPKGSKNKGTAKTRKV TTTPGRKPRGRPKKLEKEEEEGISQESSEEEQ hide sequence

RefSeq Acc Id:	XP_017457021 ⟸ XM_017601532
- Peptide Label:	isoform X2
- UniProtKB:	Q8K585 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MSESVSKSSQPLASKQEKDGTEKRGRGRPRKQPSKEPSEVPTPKRPRGRPKGSKNKGTAKTRKV TTTPGRKPRGRPKKLEKEEEEGISQESSEEEQ hide sequence

RefSeq Acc Id:

ENSRNOP00000000580 ⟸ ENSRNOT00000000580

RefSeq Acc Id:	XP_038954316 ⟸ XM_039098388
- Peptide Label:	isoform X1
- UniProtKB:	Q8K1F5 (UniProtKB/Swiss-Prot)

RefSeq Acc Id:	XP_038954317 ⟸ XM_039098389
- Peptide Label:	isoform X1
- UniProtKB:	Q8K1F5 (UniProtKB/Swiss-Prot)

RefSeq Acc Id:

ENSRNOP00000082413 ⟸ ENSRNOT00000099939

RefSeq Acc Id:

ENSRNOP00000086846 ⟸ ENSRNOT00000113836

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q8K585-F1-model_v2	AlphaFold	Q8K585	1-107	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:628699	AgrOrtholog
BioCyc Gene	G2FUF-4466	BioCyc
Ensembl Genes	ENSRNOG00000000488	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein	ENSRNOP00000000580.3	UniProtKB/TrEMBL
	ENSRNOP00000082413.1	UniProtKB/TrEMBL
	ENSRNOP00000086846	ENTREZGENE
	ENSRNOP00000086846.1	UniProtKB/Swiss-Prot
Ensembl Transcript	ENSRNOT00000000580.5	UniProtKB/TrEMBL
	ENSRNOT00000099939.1	UniProtKB/TrEMBL
	ENSRNOT00000113836	ENTREZGENE
	ENSRNOT00000113836.1	UniProtKB/Swiss-Prot
InterPro	AT_hook_DNA-bd_motif	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	HMGA	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	HMGI/Y_DNA-bd_CS	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	rno:117062	UniProtKB/Swiss-Prot
NCBI Gene	117062	ENTREZGENE
PANTHER	HIGH MOBILITY GROUP PROTEIN HMG-I/HMG-Y	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	HIGH MOBILITY GROUP PROTEINS HMG-A AND C	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	AT_hook	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Hmga1	PhenoGen
PRINTS	ATHOOK	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	HIGHMOBLTYIY	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE	HMGI_Y	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART	AT_hook	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt	A0A8I5ZXW2_RAT	UniProtKB/TrEMBL
	A0A8L2PYB4_RAT	UniProtKB/TrEMBL
	HMGA1_RAT	UniProtKB/Swiss-Prot
	Q8K1F5	ENTREZGENE
	Q8K585	ENTREZGENE
UniProt Secondary	Q8K1F5	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2015-07-29	Hmga1	high mobility group AT-hook 1	LOC689053	hypothetical protein LOC689053	Data Merged	737654	PROVISIONAL
2006-11-20	LOC689053	hypothetical protein LOC689053			Symbol and Name status set to provisional	70820	PROVISIONAL
2004-09-10	Hmga1	high mobility group AT-hook 1			Symbol and Name status set to approved	1299863	APPROVED
2003-02-27	Hmga1	high mobility group AT-hook 1			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD

Imported Disease Annotations - MGI

Imported Disease Annotations - OMIM

Imported Annotations - PID (archival)

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Imported Disease Annotations - OMIM

Imported Annotations - PID (archival)