Aia27 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL: Aia27 (Adjuvant induced arthritis QTL 27) Rattus norvegicus

Symbol: Aia27
Name: Adjuvant induced arthritis QTL 27
RGD ID: 2317057
Trait: joint integrity trait   (VT:0010548)    
Measurement Type: right rear ankle joint diameter   (CMO:0002150)    
LOD Score: 2.83
P Value: Not Available
Variance: 13.7
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2202,892,597 - 26,381,954RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0203,402,111 - 27,968,216RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0205,499,214 - 29,787,701RGDRnor5.0
RGSC_v3.4203,039,759 - 37,383,914RGDRGSC3.4
Cross Type: intercross
Strains Crossed: F344/NCrl LEW/Crl 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain
F344/NCrl  (IEA)
LEW/Crl  (IEA)

References

References - curated
# Reference Title Reference Citation
1. Genetic dissection of granulomatous enterocolitis and arthritis in the intramural peptidoglycan-polysaccharide-treated rat model of IBD. Bleich A, etal., Inflamm Bowel Dis. 2009 Jun 12;15(12):1794-1802.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
1302966Nrmnurim2028883212892804Rat
1559468Mdc1mediator of DNA damage checkpoint 12028936932912394Rat
628596Tubb5tubulin, beta 5 class I2029127792916928Rat
70991Flot1flotillin 12029178642927993Rat
1303321Ier3immediate early response 32029283782929582Rat
7678499LOC102553505uncharacterized LOC1025535052029620292972097Rat
2313830Cb707485hypothetical LOC1003107832030213903024364Rat
2252Ddr1discoidin domain receptor tyrosine kinase 12030424943064442Rat
1303309Gtf2h4general transcription factor 2H subunit 42030713283076990Rat
1303122Vars2valyl-tRNA synthetase 2, mitochondrial2030771323087994Rat
1303180Sfta2surfactant associated 22030935693094299Rat
1303125Mucl3mucin like 32031006523108569Rat
1302953CB741658CB741658 gene2031190503122302Rat
41289706LOC120098824uncharacterized LOC1200988242031507553162973Rat
2324335Mt1mmetallothionein 1M2031590373159409Rat
1562885C20h6orf15similar to human chromosome 6 open reading frame 152031723303173886Rat
41360741LOC120098827uncharacterized LOC1200988272031788873183700Rat
1598543Cdsncorneodesmosin2031794323184252Rat
1594430Rpl22-ps1ribosomal protein L22, pseudogene 12031901483190745Rat
1591981Psors1c2psoriasis susceptibility 1 candidate 22032021783203599Rat
1302992Cchcr1coiled-coil alpha-helical rod protein 12032056753218437Rat
1302974Tcf19transcription factor 192032187563222861Rat
1359491Pou5f1POU class 5 homeobox 12032231283227891Rat
1359403RT1-CE16RT1 class I, locus CE162032571093260747Rat
11357632LOC108353253uncharacterized LOC1083532532032606973290136Rat
1594403Cdk2ap1-ps8Cdk2ap1-ps8 pseudogene2032679053268051Rat
1359630RT1-CE15RT1 class I, locus CE152032755753279074Rat
41066463LOC120098828uncharacterized LOC1200988282032790753280604Rat
1594404LOC224733l-9LOC224733l-9 pseudogene2032824953282800Rat
1594405Cdk2ap1-ps7Cdk2ap1-ps7 pseudogene2032896063289752Rat
1359342RT1-CE14RT1 class I, locus CE142032966543300795Rat
1359196RT1-CE13RT1 class I, locus CE132033148303318106Rat
41203922LOC120098829uncharacterized LOC1200988292033180513324485Rat
1594406Cdk2ap1-ps6Cdk2ap1-ps6 pseudogene2033261663327363Rat
1594407Sacm2l-ps7Sacm2l-ps7 pseudogene2033307463331375Rat
1594408Sacm2l-ps6Sacm2l-ps6 pseudogene2033314613331539Rat
1594409Sacm2l-ps5Sacm2l-ps5 pseudogene2033317283332881Rat
1359103RT1-CE12RT1 class I, locus CE122033389073342547Rat
1359483RT1-CE11RT1 class I, locus CE112033553933358520Rat
41049112LOC120098832uncharacterized LOC1200988322033588293382786Rat
1594410LOC224733l-8LOC224733l-8 pseudogene2033619303362233Rat
1594411Cdk2ap1-ps5Cdk2ap1-ps5 pseudogene2033690473369193Rat
1359292RT1-CE10RT1 class I, locus CE102033772843380301Rat
1594412LOC224733l-7LOC224733l-7 pseudogene2033831633383468Rat
1595868RT1-CE5RT1 class I, locus CE52034034183479476Rat
1594413RT1-CE9-ps1RT1 class I, locus CE9, pseudogene 12034036553406844Rat
1594414RT1-CE8-ps1RT1 class I, locus CE8, pseudogene 12034182653421623Rat
1594415LOC224733l-6LOC224733l-6 pseudogene2034236423423957Rat
1594416Cdk2ap1-ps4Cdk2ap1-ps4 pseudogene2034289273430126Rat
1598234RT1-CE4RT1 class I, locus CE42034315093504535Rat
1595786RT1-CE7RT1 class I, locus CE72034342053437152Rat
41176734LOC120098833uncharacterized LOC1200988332034373733439343Rat
1594417LOC224733l-5LOC224733l-5 pseudogene2034397233440020Rat
1303017RT1-CE6RT1 class I, locus CE62034609793461929Rat
1594418Sacm2l-ps4Sacm2l-ps4 pseudogene2034680353469175Rat
1594419LOC224733l-4LOC224733l-4 pseudogene2034828943483196Rat
1594420Cdk2ap1-ps3Cdk2ap1-ps3 pseudogene2034930953493240Rat
1594421LOC224733l-3LOC224733l-3 pseudogene2035079743508279Rat
1598231RT1-CE3RT1 class I, locus CE32035166473520938Rat
1594422Cdk2ap1-ps2Cdk2ap1-ps2 pseudogene2035335093534644Rat
1598235RT1-CE2RT1 class I, locus CE22035384523541841Rat
70923Ddx39bDExD-box helicase 39B2035477023585064Rat
1594423Sacm2l-ps3Sacm2l-ps3 pseudogene2035484813548940Rat
1595869RT1-CE1RT1 class I, locus12035557793559487Rat
41374192Snord83Small nucleolar RNA SNORD832035787663578840Rat
41079206LOC120099056small nucleolar RNA SNORD832035839713584049Rat
1303186Atp6v1g2ATPase H+ transporting V1 subunit G22035876813591309Rat
1303310Nfkbil1NFKB inhibitor like 12035899743608348Rat
3020Ltalymphotoxin alpha2036188533621324Rat
3876Tnftumor necrosis factor2036220113624629Rat
1303162Ltblymphotoxin beta2036275363629381Rat
620077Lst1leukocyte specific transcript 12036346803639731Rat
727881Ncr3natural cytotoxicity triggering receptor 32036372423643748Rat
61924Aif1allograft inflammatory factor 12036467843652670Rat
1303199E230034O05RikE230034O05Rik gene2036563063658463Rat
1303025Prrc2aproline-rich coiled-coil 2A2036583913674143Rat
41318103Snora38small nucleolar RNA, H/ACA box 382036609003661033Rat
71064Bag6BAG cochaperone 62036759383690414Rat
620773Apomapolipoprotein M2036909503693550Rat
1303038G4G4 protein2036936913696194Rat
1303304Gpank1G patch domain and ankyrin repeats 12036976413700814Rat
619978Csnk2bcasein kinase 2 beta2037003633705331Rat
1303101Ly6g5blymphocyte antigen 6 family member G5B2037054643707830Rat
735180Ly6g5clymphocyte antigen 6 family member G5C2037094263713940Rat
1303164Abhd16aabhydrolase domain containing 16A, phospholipase2037190893733952Rat
1594424Rps25-ps2ribosomal protein S25, pseudogene 22037353473735801Rat
1303333Ly6g6flymphocyte antigen 6 family member G6F2037374593742327Rat
1303064Ly6g6dlymphocyte antigen 6 family member G6D2037419733752378Rat
1303112Ly6g6elymphocyte antigen 6 family member G6E2037449993749867Rat
1302999Ly6g6clymphocyte antigen 6 family member G6C2037536323757205Rat
1303269Mpig6bmegakaryocyte and platelet inhibitory receptor G6b2037573963761024Rat
1302955Ddah2DDAH family member 2, ADMA-independent2037614603764718Rat
1303043Clic1chloride intracellular channel 12037648673773711Rat
1303008Msh5mutS homolog 52037738673793337Rat
41396061LOC120099048U6 spliceosomal RNA2037745723774677Rat
1359359Sapcd1suppressor APC domain containing 12037939803795767Rat
1303137Vwa7von Willebrand factor A domain containing 72037949913805646Rat
3950Vars1valyl-tRNA synthetase 12038057743820468Rat
11436027LOC108349032uncharacterized LOC1083490322038206733830868Rat
1590214Rpl13-ps1ribosomal protein L13, pseudogene 12038394603839702Rat
1598536Lsm2LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated2038434673847217Rat
1595925Hspa1lheat shock protein family A (Hsp70) member 1 like2038488433855571Rat
2840Hspa1bheat shock protein family A (Hsp70) member 1B2038551043859148Rat
1593284Hspa1aheat shock protein family A (Hsp70) member 1A2038707653873221Rat
7707260LOC102549726uncharacterized LOC1025497262038765633879281Rat
41104675Snord48small nucleolar RNA, C/D box 482038772833877346Rat
41062511Snord52small nucleolar RNA, C/D box 522038784123878477Rat
3163Neu1neuraminidase 12038974803901745Rat
41072487LOC120098979uncharacterized LOC1200989792039009763906605Rat
1303167Slc44a4solute carrier family 44, member 42039030993919215Rat
1302972Ehmt2euchromatic histone lysine methyltransferase 22039196233936751Rat
1302958Zbtb12zinc finger and BTB domain containing 122039376683940514Rat
7661101LOC102553878uncharacterized LOC1025538782039398263944890Rat
2231C2complement C22039514743970376Rat
2204Cfbcomplement factor B2039706433976510Rat
1303325Nelfenegative elongation factor complex member E2039765123982389Rat
1303059Skic2SKI2 subunit of superkiller complex2039824943993261Rat
1303267Dxodecapping exoribonuclease2039933223995484Rat
1359601Stk19serine/threonine kinase 192039955904005117Rat
620005C4acomplement C4A2040057314020083Rat
2461Cyp21a1cytochrome P450, family 21, subfamily a, polypeptide 12040202174026923Rat
3887Tnxa-ps1tenascin XA, pseudogene 12040264714027826Rat
40991350LOC120098978uncharacterized LOC1200989782040846124087472Rat
1303317Atf6bactivating transcription factor 6 beta2040909214098920Rat
1303227FkbplFKBP prolyl isomerase like2040998454101315Rat
620375Ppt2palmitoyl-protein thioesterase 22041125204132774Rat
1359348Prrt1proline-rich transmembrane protein 12041179574121643Rat
1549706Egfl8EGF-like-domain, multiple 82041329304136024Rat
1303287Agpat11-acylglycerol-3-phosphate O-acyltransferase 12041359554144880Rat
1588458Rnf5ring finger protein 52041455394147985Rat
69258Ageradvanced glycosylation end product-specific receptor2041481504151361Rat
1303084Pbx2PBX homeobox 22041515004156425Rat
1303014Gpsm3G-protein signaling modulator 32041571234158984Rat
1303282Notch4notch receptor 42041603624184466Rat
1588459Stk19-psserine/threonine kinase 19 pseudogene2041941714196677Rat
1591983C4bcomplement C4B2041973714211684Rat
1303332Cyp21a1-pscytochrome P450, family 21, subfamily a, polypeptide 1, pseudogene2042156374231737Rat
1624210Btnl4butyrophilin-like 42042313504244825Rat
1303010Btnl8butyrophilin-like 82042648404280876Rat
1303124Btnl7butyrophilin-like 72043010784313522Rat
1588460Btnl6-ps1butyrophilin-like 6, pseudogene 12043369024344877Rat
1598537Btnl5butyrophilin-like 52043667804376385Rat
1598538Btn3a2butyrophilin, subfamily 3, member A22043982544405681Rat
1597063Tsbp1testis expressed basic protein 12044100024467284Rat
1303262Btnl3butyrophilin-like 32044740564489024Rat
11477629LOC108349035uncharacterized LOC1083490352044758274479937Rat
620731Btnl2butyrophilin-like 22044901694504002Rat
1593283RT1-DaRT1 class II, locus Da2045134644518457Rat
1595922RT1-Db2RT1 class II, locus Db22045207234539724Rat
1303212Arrb2-psarrestin, beta 2, pseudogene2045238974524874Rat
1593282RT1-Db1RT1 class II, locus Db12045486644558237Rat
1595867RT1-BaRT1 class II, locus Ba2045751344579727Rat
3469RT1-BbRT1 class II, locus Bb2045965584602201Rat
1595814RT1-DObRT1 class II, locus DOb2046194184625627Rat
3818Tap2transporter 2, ATP binding cassette subfamily B member2046363474650387Rat
3426Psmb8proteasome 20S subunit beta 82046521594655122Rat
3817Tap1transporter 1, ATP binding cassette subfamily B member2046562624666634Rat
3427Psmb9proteasome 20S subunit beta 92046670444672512Rat
735096RT1-DMbRT1 class II, locus DMb2046931024700340Rat
735053RT1-DMaRT1 class II, locus DMa2047070284710432Rat
41359868Brd2lbromodomain containing 2 like2047150494726873Rat
1303324Brd2bromodomain containing 22047270784735389Rat
3477RT1-DOaRT1 class II, locus DOa2047535874756590Rat
1595921RT1-HaRT1 class II, locus Ha2047606314770662Rat
1595866RT1-Hb-ps1RT1 class II, locus Hb, pseudogene 12047755984779590Rat
2373Col11a2collagen type XI alpha 2 chain2047869324816598Rat
3611Rxrbretinoid X receptor beta2048168134823267Rat
1593280Slc39a7solute carrier family 39 member 72048231664826538Rat
1303158Hsd17b8hydroxysteroid (17-beta) dehydrogenase 82048267254828742Rat
2325545Mir219a1microRNA 219a-12048296874829796Rat
3576Ring1ring finger protein 12048301204833623Rat
41315246LOC120098897uncharacterized LOC1200988972048430814847572Rat
1359610RT1-A3RT1 class I, locus A32048475184851344Rat
1594398Sacm2l-ps2Sacm2l-ps2 pseudogene2048602074861343Rat
1594399Sacm2l-ps1Sacm2l-ps1 pseudogene2048614394861499Rat
1594400LOC224733l-2LOC224733l-2 pseudogene2048669864867269Rat
1595923RT1-A2RT1 class Ia, locus A22048709394910183Rat
1591984Cdk2ap1-ps1Cdk2ap1-pseudogene 12048778724878222Rat
1594401LOC224733l-1LOC224733l-1 pseudogene2048937044901482Rat
1595924RT1-A1RT1 class Ia, locus A12049053094914593Rat
3618Vps52VPS52 subunit of GARP complex2049207154931685Rat
41106045LOC120099050U6 spliceosomal RNA2049281454928241Rat
3595Rps18ribosomal protein S182049314274935538Rat
620328B3galt4Beta-1,3-galactosyltransferase 42049360894937664Rat
2209Wdr46WD repeat domain 462049378454945796Rat
1303006Pfdn6prefoldin subunit 62049459594947433Rat
1302985Ralgdsl2ral guanine nucleotide dissociation stimulator like 22049484954956774Rat
3819TapbpTAP binding protein2049569374966191Rat
1359627Zbtb22zinc finger and BTB domain containing 222049663314969853Rat
621227Daxxdeath-domain associated protein2049700904976145Rat
1303072AA926063AA926063gene2049764624988984Rat
11496771Smim40small integral membrane protein 402049786584989050Rat
1591985Sec61-psSec61 pseudogene2049909544991292Rat
41363335Trnaa-agc96transfer RNA alanine (anticodon AGC) 962049960874996159Rat
1591986Rps25-ps1ribosomal protein S25, pseudogene 12049971124997779Rat
1359118Kifc1kinesin family member C12049988325017107Rat
1303205Phf1PHD finger protein 12050177655022872Rat
1303306CutacutA divalent cation tolerance homolog2050229565024580Rat
621090Syngap1synaptic Ras GTPase activating protein 12050263665056659Rat
1303050Zbtb9zinc finger and BTB domain containing 92050574335060459Rat
41016453LOC120098811uncharacterized LOC1200988112050991415106643Rat
621635Bak1BCL2-antagonist/killer 12051004805109669Rat
1359729Ggnbp1gametogenetin binding protein 12051098495116185Rat
2934Itpr3inositol 1,4,5-trisphosphate receptor, type 32051369685202339Rat
41154967LOC120098963uncharacterized LOC1200989632051928055201154Rat
1306917Uqcc2ubiquinol-cytochrome c reductase complex assembly factor 22052028375214541Rat
1584104Ip6k3inositol hexakisphosphate kinase 32052238635245443Rat
11396817LOC108353257uncharacterized LOC1083532572052713225274062Rat
1305341Lemd2LEM domain nuclear envelope protein 22052823975296621Rat
41213255LOC120098965uncharacterized LOC1200989652052967725304377Rat
1642907Mlnmotilin2053042495308948Rat
7574070LOC102551729uncharacterized LOC1025517292053270865330154Rat
7558298LOC102551791uncharacterized LOC1025517912053365675342262Rat
41018858LOC120098906uncharacterized LOC1200989062053516275352349Rat
41201546LOC120098818uncharacterized LOC1200988182053704375382107Rat
41370127LOC120098856uncharacterized LOC1200988562054243755429086Rat
2745Grm4glutamate metabotropic receptor 42054841725572821Rat
41239998LOC120098859uncharacterized LOC1200988592055870005602500Rat
628699Hmga1high mobility group AT-hook 12056110885618755Rat
1564450Smim29small integral membrane protein 292056188455620856Rat
1310183Nudt3nudix hydrolase 32056343455686950Rat
621024Rps10ribosomal protein S102056943135698922Rat
3247Pacsin1protein kinase C and casein kinase substrate in neurons 12057181345768064Rat
1594842SpdefSAM pointed domain containing ets transcription factor2057714405785893Rat
1559829Ilruninflammation and lipid regulator with UBA-like and NBR1-like domains2058099315876197Rat
1306065Snrpcsmall nuclear ribonucleoprotein polypeptide C2058884535906638Rat
1307264Bltp3abridge-like lipid transfer protein family member 3A2059102615954641Rat
41017433LOC120099029small nucleolar RNA SNORA262059164825916607Rat
1305626Taf11TATA-box binding protein associated factor 112059557745963593Rat
1309183Anks1aankyrin repeat and sterile alpha motif domain containing 1A2059636586117139Rat
1359387Tcp11t-complex 112061262676138408Rat
7662094LOC102552617uncharacterized LOC1025526172061361166142709Rat
40927733LOC120098860uncharacterized LOC1200988602061608136170387Rat
11481265LOC108349039uncharacterized LOC1083490392061717066177179Rat
1304880Scube3signal peptide, CUB domain and EGF like domain containing 32061991826231100Rat
1306239Zfp523zinc finger protein 5232062348846266512Rat
1307945Def6DEF6 guanine nucleotide exchange factor2062685796290030Rat
3370Ppardperoxisome proliferator-activated receptor delta2062987856363970Rat
41315732LOC120098961uncharacterized LOC1200989612063593766367170Rat
1561045FanceFA complementation group E2063694166386631Rat
41127036Trnap-agg65transfer RNA proline (anticodon AGG) 652063706596370739Rat
620497Rpl10aribosomal protein L10A2063888006391358Rat
1311583Tead3TEA domain transcription factor 32063920536411446Rat
1311062Tulp1TUB like protein 12064121706424103Rat
1309155Fkbp5FKBP prolyl isomerase 52064572076575404Rat
40958994Trnaa-agc33transfer RNA alanine (anticodon AGC) 332065623546562428Rat
1306008Armc12armadillo repeat containing 122065878596598355Rat
1592336Clpsl2colipase-like 22066081286610951Rat
2363Clpscolipase2066205296622709Rat
1359370Lhfpl5LHFPL tetraspan subfamily member 52066323246642534Rat
1308272Srpk1SRSF protein kinase 12066458096682448Rat
41249976LOC120098971uncharacterized LOC1200989712066810606711596Rat
1308898Slc26a8solute carrier family 26 member 82066862066749478Rat
70496Mapk14mitogen activated protein kinase 142067496466810590Rat
3045Mapk13mitogen activated protein kinase 132068352776845500Rat
1306868Brpf3bromodomain and PHD finger containing, 32068646846902760Rat
1306685Pnpla1patatin-like phospholipase domain containing 12069179936952157Rat
41320458LOC120098863uncharacterized LOC1200988632069272536931705Rat
41008588LOC120098864uncharacterized LOC1200988642069372636938674Rat
1591066Bnip5BCL2 interacting protein 52069577366975062Rat
2321717Pxt1peroxisomal testis enriched protein 12070022707005296Rat
1309887Kctd20potassium channel tetramerization domain containing 202070158287032766Rat
1309455Stk38serine/threonine kinase 382070342457067803Rat
1309233Srsf3serine and arginine rich splicing factor 32070919287101860Rat
41402059Scarna14l1small Cajal body-specific RNA 14 like 12071064597106619Rat
41217074LOC120098812uncharacterized LOC1200988122071436727149117Rat
69328Cdkn1acyclin-dependent kinase inhibitor 1A2071491777159727Rat
1560150Rab44RAB44, member RAS oncogene family2071645767198473Rat
6497687Npbwr1l1neuropeptides B and W receptor 1 like 12072040947208620Rat
1308021Cpne5copine 52072067427289309Rat
7613542LOC102547155uncharacterized LOC1025471552072915877295559Rat
1309119Ppil1peptidylprolyl isomerase like 12073022927322349Rat
41267553Trnat-agu18transfer RNA threonine (anticodon AGU) 182073152687315348Rat
735065C20h6orf89similar to human chromosome 6 open reading frame 892073224837362054Rat
1304760Pi16peptidase inhibitor 162073760737385386Rat
41193729LOC120098949uncharacterized LOC1200989492073797837383606Rat
1309262Mtch1mitochondrial carrier 12073899427413426Rat
1309840Fgd2FYVE, RhoGEF and PH domain containing 22074247957441603Rat
7683538LOC102547357uncharacterized LOC1025473572074946257497865Rat
11436627LOC108349043uncharacterized LOC1083490432075006297504106Rat
3330Pim1Pim-1 proto-oncogene, serine/threonine kinase2075549217559174Rat
1585327Ran-ps5RAN, member RAS oncogene family, pseudogene 52075720087582115Rat
1585322Tmem217transmembrane protein 2172075841777619023Rat
1564987Tbc1d22bTBC1 domain family, member 22B2076190967675232Rat
1308035Rnf8ring finger protein 82076822587710448Rat
1307801Cmtr1cap methyltransferase 12077227297782579Rat
1588733Ccdc167coiled-coil domain containing 1672077639277782090Rat
2321641Rps20l5ribosomal protein S20 like 52078758407876354Rat
1597190Rps15-ps19ribosomal protein S15, pseudogene 192078895097890004Rat
1307031Mdga1MAM domain containing glycosylphosphatidylinositol anchor 12079003277964309Rat
41285711LOC120098975uncharacterized LOC1200989752079268007930511Rat
41031683LOC120098917uncharacterized LOC1200989172080079798017409Rat
41164042LOC120098952uncharacterized LOC1200989522080822068083106Rat
1307113Zfand3zinc finger AN1-type containing 32080834078279617Rat
1306975Btbd9BTB domain containing 92082863378645567Rat
40982220LOC120098951uncharacterized LOC1200989512084279888432988Rat
7570468LOC102548069uncharacterized LOC1025480692086443108649170Rat
2702Glo1glyoxalase 12086636178681661Rat
619986Dnah8dynein, axonemal, heavy chain 82086929398946780Rat
41118814LOC120098982uncharacterized LOC1200989822088138188815102Rat
41154350LOC120098983uncharacterized LOC1200989832088289418832801Rat
6501785Eif3i-ps4eukaryotic translation initiation factor 3, subunit I, pseudogene 42088488258851018Rat
41067580LOC120099051U6 spliceosomal RNA2088506188850719Rat
2703Glp1rglucagon-like peptide 1 receptor2089720049010241Rat
1566039Umodl1uromodulin-like 12090277519087133Rat
40933832LOC120099076small nucleolar RNA SNORA482090993829099524Rat
620294Abcg1ATP binding cassette subfamily G member 12091266879182948Rat
3847Tff3trefoil factor 32091932599197969Rat
620709Tff2trefoil factor 22092157509219619Rat
620707Tff1trefoil factor 12092357369239597Rat
41087994LOC120099070small nucleolar RNA SNORA442092480429248157Rat
1310135Tmprss3transmembrane serine protease 32092541029273808Rat
1310305Ubash3aubiquitin associated and SH3 domain containing, A2092914719334685Rat
1307712Rsph1radial spoke head component 12093419109360640Rat
1308587Slc37a1solute carrier family 37 member 12093605019433895Rat
40931161LOC120098980uncharacterized LOC1200989802093712639373758Rat
41345822LOC120098916uncharacterized LOC1200989162094601449466526Rat
621035Pde9aphosphodiesterase 9A2094698099562949Rat
9151994LOC103694394uncharacterized LOC1036943942095843189587414Rat
1585179Wdr4WD repeat domain 42095872059611434Rat
621020Ndufv3NADH:ubiquinone oxidoreductase subunit V32096124629621622Rat
41074342LOC120099066small nucleolar RNA SNORA36 family2096282379628367Rat
1305003Pknox1PBX/knotted 1 homeobox 12096628669705030Rat
2287Cbscystathionine beta synthase2097080899732623Rat
1584190U2af1U2 small nuclear RNA auxiliary factor 12097429049753840Rat
2413Cryaacrystallin, alpha A2097836059787351Rat
9279284LOC103694395uncharacterized LOC1036943952098420979846059Rat
69407Sik1salt-inducible kinase 12099494079959036Rat
11371075LOC108349047uncharacterized LOC1083490472099591549968781Rat
41270226LOC120098851uncharacterized LOC1200988512099740729987401Rat
41131172LOC120098852uncharacterized LOC120098852201000515610006928Rat
1565879Hsf2bpheat shock transcription factor 2 binding protein201003556210123059Rat
1305633Rrp1bribosomal RNA processing 1B201012311110148704Rat
1566085Pdxkl1pyridoxal kinase like 1201016293410192572Rat
621324Pdxkpyridoxal kinase201021027610232314Rat
2435Cstbcystatin B201024546210247505Rat
1307286Rrp1ribosomal RNA processing 1201026089210272141Rat
41140301LOC120098853uncharacterized LOC120098853201031509410315845Rat
1305787Agpat31-acylglycerol-3-phosphate O-acyltransferase 3201033096010415358Rat
1311263Trappc10trafficking protein particle complex subunit 10201043873710499074Rat
1582817Pwp2PWP2, small subunit processome component201049933210512965Rat
1303003Gatd3aglutamine amidotransferase class 1 domain containing 3A201051479310522894Rat
1562791Icoslginducible T-cell co-stimulator ligand201060042010610718Rat
1303239Dnmt3lDNA methyltransferase 3 like201061493310629337Rat
1311139Aireautoimmune regulator201063605810651060Rat
3311Pfklphosphofructokinase, liver type201066428510686324Rat
1309594Cfap410cilia and flagella associated protein 410201068786310694736Rat
1311889Trpm2transient receptor potential cation channel, subfamily M, member 2201070356810753189Rat
41283369LOC120099063Z6 small nucleolar RNA201074839010748486Rat
41366610LOC120099065Z6 small nucleolar RNA201074955410749629Rat
628861Lrrc3leucine rich repeat containing 3201075891910763736Rat
1563108Tspearthrombospondin-type laminin G domain and EAR repeats201077180610837419Rat
2318639Krtap10-8l1keratin associated protein 10-8 like 1201079935510800215Rat
1586373Krtap10l1keratin associated protein 10 like 1201080719210808250Rat
1597306Krtap10l2keratin associated protein 10 like 2201081476510815298Rat
1561557Krtap10-10l1keratin associated protein 10-10 like 1201082417710825590Rat
41343373LOC120098854keratin-associated protein 10-1-like201083507910835882Rat
41225578LOC120098855keratin-associated protein 10-11-like201084091410841681Rat
1596091Krtap10-10l2keratin associated protein 10-10 like 2201084511010846261Rat
1596076Krtap10-10keratin associated protein 10-10201085495110864402Rat
1593740Krtap10-8keratin associated protein 10-8201087199110872927Rat
1583076Krtap10-1keratin associated protein 10-1201088052410881445Rat
1596048Krtap10-2keratin associated protein 10-2201088858810889386Rat
41360668LOC120099044U6 spliceosomal RNA201090206910902172Rat
2319746Krtap12-2keratin associated protein 12-2201090442210904751Rat
2319709Krtap12-4keratin associated protein 12-4201091035010910682Rat
2319481Krtap12-1keratin associated protein 12-1201091734010917949Rat
2319572Krtap12-2l1keratin associated protein 12-2 like 1201092166810922267Rat
2319535Krtap12-1l1keratin associated protein 12-1 like 1201092758210927976Rat
9307255Krtap10-1l1keratin associated protein 10-1 like 1201093355810934430Rat
1596032Krtap10-9keratin associated protein 10-9201093960910940526Rat
40953122LOC12009899128S ribosomal protein S36, mitochondrial-like201094918110949634Rat
1304860Ube2g2ubiquitin-conjugating enzyme E2G 2201098373411005468Rat
41264805Snrpg-ps3small nuclear ribonucleoprotein polypeptide G, pseudogene 3201099038410993840Rat
1561022Sumo3small ubiquitin-like modifier 3201101014011020850Rat
1305983Pttg1ipPTTG1 interacting protein201103001311047742Rat
41283550Trnap-agg81transfer RNA proline (anticodon AGG) 81201104797111048051Rat
1305581Itgb2integrin subunit beta 2201106139411097656Rat
41142660LOC120099012uncharacterized LOC120099012201108759411091193Rat
1311257Slx9SLX9 ribosome biogenesis factor201111463211147532Rat
1594734Nme2-ps1NME/NM23 nucleoside diphosphate kinase 2, pseudogene 1201117937211179973Rat
41301513LOC120098928uncharacterized LOC120098928201118200411186697Rat
41127234LOC120099069small nucleolar RNA SNORA44201118508211185194Rat
2033Adarb1adenosine deaminase, RNA-specific, B1201122256911350854Rat
41004807Trnaa-agc36transfer RNA alanine (anticodon AGC) 36201135915111359231Rat
1307334Pofut2protein O-fucosyltransferase 2201136707311377788Rat
7685928LOC102556115uncharacterized LOC102556115201138351811389211Rat
41190272LOC120098894uncharacterized LOC120098894201141248411430593Rat
41191257Trnat-agu26transfer RNA threonine (anticodon AGU) 26201144553011445610Rat
70936Col18a1collagen type XVIII alpha 1 chain201147410411582593Rat
41244384LOC120098958uncharacterized LOC120098958201147453511482506Rat
41054945Pin4-ps5peptidylprolyl cis/trans isomerase, NIMA-interacting 4, pseudogene 5201150081111501472Rat
3695Slc19a1solute carrier family 19 member 1201158441011602429Rat
7752662Ahcy-ps1adenosylhomocysteinase, pseudogene 1201166914311670833Rat
1307430Pcbp3poly(rC) binding protein 3201167821811878210Rat
1565398Col6a1collagen type VI alpha 1 chain201190610511924599Rat
41080828LOC120098922uncharacterized LOC120098922201195121711954976Rat
1305585Col6a2collagen type VI alpha 2 chain201202167612049425Rat
70915Ftcdformimidoyltransferase cyclodeaminase201205520312068717Rat
1562578Spatc1lspermatogenesis and centriole associated 1-like201207404012083873Rat
620955Lsslanosterol synthase201209113812118858Rat
1306834Mcm3apminichromosome maintenance complex component 3 associated protein201212757012165165Rat
1308722YbeyybeY metalloendoribonuclease201216519212174713Rat
1564149C20h21orf58similar to human chromosome 21 open reading frame 58201216727912188665Rat
1595865Pcntpericentrin201219059712278723Rat
1582897Dip2adisco-interacting protein 2 homolog A201228456612371068Rat
3615S100bS100 calcium binding protein B201237286612381619Rat
41279118LOC120099045U6 spliceosomal RNA201238856412388669Rat
1565519Prmt2protein arginine methyltransferase 2201239474812420643Rat
2325469Mir678microRNA 678201242045812420540Rat
1306923Slc5a4solute carrier family 5 member 4201247564412518738Rat
1309867Slc5a4bsolute carrier family 5 (neutral amino acid transporters, system A), member 4b201255954512609133Rat
41114369LOC120099032U2 spliceosomal RNA201260852512608723Rat
1565460Zfp280bzinc finger protein 280B201262710612641943Rat
9200139Rpl13l1ribosomal protein L13 like 1201264836512652576Rat
1563815Slc5a1l1solute carrier family 5 member 1 like 1201266438812713968Rat
1306807Vpreb3V-set pre-B cell surrogate light chain 3201271742112718785Rat
1564162C20h22orf15similar to human chromosome 22 open reading frame 15201272316012725864Rat
1359417Chchd10coiled-coil-helix-coiled-coil-helix domain containing 10201272583912727638Rat
3099Mmp11matrix metallopeptidase 11201273084612739629Rat
1308761Smarcb1SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1201274116412763616Rat
1597373Derl3derlin 3201275449012768454Rat
621163Mifmacrophage migration inhibitory factor201279091912791784Rat
69362Gstt2glutathione S-transferase theta 2201281961712823288Rat
11419125Rps28-ps4ribosomal protein S28, pseudogene 4201282545512825905Rat
1591294Gstt4glutathione S-transferase, theta 4201283517812842306Rat
2765Gstt1glutathione S-transferase theta 1201285661312873586Rat
1562732Gstt3glutathione S-transferase, theta 3201287518412882540Rat
61923DdtD-dopachrome tautomerase201288421612886687Rat
620263Cabin1calcineurin binding protein 1201289331413015357Rat
7615076LOC102556116uncharacterized LOC102556116201299073212994638Rat
1308595Susd2sushi domain containing 2201301751613024820Rat
2684Ggt5gamma-glutamyltransferase 5201304325513071523Rat
41206442LOC120099053U6 spliceosomal RNA201304479413044892Rat
2683Ggt1gamma-glutamyltransferase 1201307469513104095Rat
40937272LOC120098976uncharacterized LOC120098976201309450713097110Rat
2318441Lrrc75bleucine rich repeat containing 75B201310030213106503Rat
1597573Snrpd3small nuclear ribonucleoprotein D3 polypeptide201313011213145947Rat
1597571Gucd1guanylyl cyclase domain containing 1201314561713156330Rat
7489019Mir327microRNA 327201316164013161733Rat
7579095LOC102556392uncharacterized LOC102556392201316913813215233Rat
7549651LOC102556333uncharacterized LOC102556333201321043213225548Rat
620091Upb1beta-ureidopropionase 1201321725213243590Rat
40965924LOC120098899uncharacterized LOC120098899201325881313266311Rat
2049Adora2aadenosine A2a receptor201331584813333386Rat
1309570Specc1lsperm antigen with calponin homology and coiled-coil domains 1-like201333798313443665Rat
41249362Atp5mf-ps5ATP synthase membrane subunit f, pseudogene 5201336675513366987Rat
40978725LOC120098869uncharacterized LOC120098869201337142113374594Rat
1307993BcrBCR activator of RhoGEF and GTPase201346932513596942Rat
1596098Rab36RAB36, member RAS oncogene family201360670013624304Rat
1305601Rsph14radial spoke head 14 homolog201362749513703447Rat
2717GnazG protein subunit alpha z201364347313694240Rat
1561987Rpl9-ps20ribosomal protein L9, pseudogene 20201375129413753402Rat
41364196LOC120098888uncharacterized LOC120098888201379149813819942Rat
1590986Polr3d-ps1polymerase (RNA) III (DNA directed) polypeptide D, pseudogene 1201386247613864567Rat
11485860LOC108353250uncharacterized LOC108353250201393765413963003Rat
1590969Pcdh15protocadherin related 15201399709415496446Rat
41029094LOC120098844uncharacterized LOC120098844201404711514064186Rat
41074407LOC120098846uncharacterized LOC120098846201406762614092195Rat
41174939LOC120098845uncharacterized LOC120098845201429165414303622Rat
41260590Trnaa-agc95transfer RNA alanine (anticodon AGC) 95201443993414440006Rat
11442616LOC108349009uncharacterized LOC108349009201456775514586143Rat
41182832Trnap-agg62transfer RNA proline (anticodon AGG) 62201468853814688620Rat
628671ZwintZW10 interacting kinetochore protein201593815715953997Rat
11451238LOC108349051uncharacterized LOC108349051201595283115978666Rat
41395705LOC120099019small nucleolar RNA SNORA17201609633516096464Rat
1559903Jpt2l1Jupiter microtubule associated homolog 2 like 1201662535416626151Rat
41197327LOC120099024small nucleolar RNA SNORA17201671870216718825Rat
1560350Psma6-ps1proteasome 20S subunit alpha 6, pseudogene 1201682368416824632Rat
2321795Pkm-ps20pyruvate kinase M1/2, pseudogene 20201687889316880863Rat
2322906Mtfr1-ps2mitochondrial fission regulator 1, pseudogene 2201692643216929929Rat
1589811Nqo2-ps1N-ribosyldihydronicotinamide:quinone reductase 2, pseudogene 1201697436816975074Rat
11465285LOC108349052uncharacterized LOC108349052201707343617078563Rat
9108964LOC103694428single-stranded DNA-binding protein, mitochondrial pseudogene201710992017113186Rat
7587909LOC102547881uncharacterized LOC102547881201717178817178143Rat
620954Ipmkinositol polyphosphate multikinase201721698817251675Rat
9200697Rpl39-ps14ribosomal protein L39, pseudogene 14201725387717254231Rat
1309529Cisd1CDGSH iron sulfur domain 1201725530217268688Rat
41010448Micos10-ps1mitochondrial contact site and cristae organizing system subunit 10, pseudogene 1201727782717278310Rat
1307886Ube2d1ubiquitin-conjugating enzyme E2D 1201730931517343770Rat
41172408Trnas-aga15transfer RNA serine (anticodon AGA) 15201733335317333433Rat
620682Tfamtranscription factor A, mitochondrial201735624317368293Rat
7572815LOC102548205uncharacterized LOC102548205201740525817408569Rat
1307459Bicc1BicC family RNA binding protein 1201744963917686775Rat
7674886LOC102548329uncharacterized LOC102548329201772173517737688Rat
40969806LOC120098901uncharacterized LOC120098901201791574918024603Rat
40931338LOC120098903uncharacterized LOC120098903201793554617987049Rat
1307967Phyhiplphytanoyl-CoA 2-hydroxylase interacting protein-like201802474418065822Rat
1310149Fam13cfamily with sequence similarity 13, member C201806562518187792Rat
41057004LOC120098904uncharacterized LOC120098904201817004918172478Rat
41171069LOC120098902uncharacterized LOC120098902201818185518190318Rat
41195318LOC120098867uncharacterized LOC120098867201824753918289067Rat
7602974LOC102549211uncharacterized LOC102549211201829303418294845Rat
7730177LOC102552716uncharacterized LOC102552716201830081518321944Rat
41404381LOC120098837uncharacterized LOC120098837201833372018349475Rat
1596295Slc16a9solute carrier family 16, member 9201833586218377125Rat
7646506LOC102553246uncharacterized LOC102553246201839942318406649Rat
6490783Mrlnmyoregulin201840678918423805Rat
1587433Ccdc6coiled-coil domain containing 6201843217718528186Rat
11520367LOC10834905440S ribosomal protein S26-like201846880018469148Rat
620157Ank3ankyrin 3201860226719225831Rat
7579079LOC102553944uncharacterized LOC102553944201870577418708244Rat
41100321LOC120099030small nucleolar RNA SNORD65201874076418740835Rat
7560662LOC102554153uncharacterized LOC102554153201885968418866463Rat
2318104St13-ps10ST13, Hsp70 interacting protein, pseudogene 10201920288219204368Rat
1564702Dynlt2b-ps1dynein light chain Tctex-type 2B, pseudogene 1201921604819216620Rat
40994920LOC120099015uncharacterized LOC120099015201922491319227113Rat
1586296Rpl29-ps2ribosomal protein L29, pseudogene 2201924812919248708Rat
2319Cdk1cyclin-dependent kinase 1201926622619281417Rat
7631568LOC102554932uncharacterized LOC102554932201931572119323063Rat
1306871Rhobtb1Rho-related BTB domain containing 1201932714219456121Rat
41195948LOC120098936uncharacterized LOC120098936201935955319369791Rat
41142093LOC120099068small nucleolar RNA SNORA24201947240419472532Rat
40982407LOC120098858uncharacterized LOC120098858201955362419555697Rat
41049570LOC120098838uncharacterized LOC120098838201962625619673997Rat
41007037LOC120098840uncharacterized LOC120098840201966475119701525Rat
41213522LOC120098839uncharacterized LOC120098839201968833419709070Rat
7519461LOC102555815uncharacterized LOC102555815201976219619784101Rat
41150740LOC120098883uncharacterized LOC120098883201976272019766571Rat
1309273Tmem26transmembrane protein 26201982076819872561Rat
7573196Eno1-ps19enolase 1, pseudogene 19201990361419909063Rat
7576062LOC102546320uncharacterized LOC102546320201993089919939872Rat
7679422LOC102546397uncharacterized LOC102546397201993985219965580Rat
1564320Rpl5-ps4ribosomal protein L5, pseudogene 4201999909020013525Rat
1306739Cabcoco1ciliary associated calcium binding coiled-coil 1202005849220167973Rat
7745235LOC102546480uncharacterized LOC102546480202023317320234711Rat
7689460LOC102546554uncharacterized LOC102546554202023462920240296Rat
41160361Trnaa-agc57transfer RNA alanine (anticodon AGC) 57202028412420284204Rat
1311735Arid5bAT-rich interaction domain 5B202030773120490746Rat
11401889LOC108349057uncharacterized LOC108349057202050215420509680Rat
7736416LOC102550601uncharacterized LOC102550601202050816320515121Rat
1304834Rtkn2rhotekin 2202053662820609951Rat
41231901LOC120098810uncharacterized LOC120098810202057758520580717Rat
40939469LOC120098914uncharacterized LOC120098914202061538120624355Rat
40963057LOC120098912uncharacterized LOC120098912202065018120652793Rat
1565986Zfp365zinc finger protein 365202066624020689734Rat
41299223LOC120098945uncharacterized LOC120098945202080025520809482Rat
7628198LOC102550965uncharacterized LOC102550965202084477620875747Rat
11381173LOC108349058uncharacterized LOC108349058202088743120910591Rat
41149311LOC120098946uncharacterized LOC120098946202093799220954806Rat
11425208LOC108349059uncharacterized LOC108349059202097891021031807Rat
1308233Ado2-aminoethanethiol dioxygenase202104481521045983Rat
621608Egr2early growth response 2202105127021056322Rat
11356502LOC108349024uncharacterized LOC108349024202108663821088750Rat
41276577LOC120098947uncharacterized LOC120098947202108899021095642Rat
61937Nrbf2nuclear receptor binding factor 2202130855521326881Rat
708458Jmjd1cjumonji domain containing 1C202133214721494220Rat
41268140LOC120099047U6 spliceosomal RNA202135492621355027Rat
1560401Reep3receptor accessory protein 3202149386821578698Rat
41033381LOC120098841uncharacterized LOC120098841202160471721607673Rat
41272712LOC120098843uncharacterized LOC120098843202161931021623027Rat
41116898LOC120098842uncharacterized LOC120098842202162502621634598Rat
7707478LOC102551701uncharacterized LOC102551701202165179221665185Rat
1559781Dnal4-ps1dynein, axonemal, light chain 4, pseudogene 1202172317721724458Rat
1585090Rpsa-ps10ribosomal protein SA, pseudogene 10202182249421824983Rat
7535666LOC102552132uncharacterized LOC102552132202192258521934467Rat
1566373Rpl36al-ps5ribosomal protein L36A, pseudogene 5202203530022035620Rat
40976251LOC120099080small nucleolar RNA SNORA17202209705122097182Rat
1595813Plin3-ps1perilipin 3, pseudogene 1202213109522132852Rat
6500332Rps27a-ps25ribosomal protein S27a, pseudogene 25202228573922286300Rat
2323967LOC100362811hypothetical LOC100362811202232726322329004Rat
7510380LOC102552513uncharacterized LOC102552513202250304422513034Rat
41231372LOC120098900uncharacterized LOC120098900202300695823009573Rat
2319794Rplp0-ps2ribosomal protein lateral stalk subunit P0, pseudogene 2202313632723138545Rat
41161182LOC120099036U2 spliceosomal RNA202319717723197297Rat
7692665LOC102552717uncharacterized LOC102552717202335781123396240Rat
1562230Ctnna3catenin alpha 3202361446925200026Rat
1304866Lrrtm3leucine rich repeat transmembrane neuronal 3202451562724689669Rat
40985922Eif3g-ps1eukaryotic translation initiation factor 3, subunit G, pseudogene 1202489374724894810Rat
6501150Hspa8-ps30heat shock protein family A (Hsp70) member 8, pseudogene 30202504651925048409Rat
11454336Tmem167b-ps1transmembrane protein 167B, pseudogene 1202505138025051934Rat
41109825Ube2v2-ps1ubiquitin conjugating enzyme E2 V2, pseudogene 1202512470525125327Rat
11369221Trnas-uga4transfer RNA serine (anticodon UGA) 4202520055225200633Rat
1591898Dnajc12DnaJ heat shock protein family (Hsp40) member C12202524674425267508Rat
41302850Trnaa-agc21transfer RNA alanine (anticodon AGC) 21202526652425266596Rat
1308542Sirt1sirtuin 1202530722525329273Rat
1310971Herc4HECT and RLD domain containing E3 ubiquitin protein ligase 4202532997225404657Rat
40994842Mrps36-ps1mitochondrial ribosomal protein S36, pseudogene 1202541412725424854Rat
1308510Mypnmyopalladin202542989825522443Rat
9272284LOC103694425U1 small nuclear ribonucleoprotein C pseudogene202547838825479830Rat
1304957Atoh7atonal bHLH transcription factor 7202553082625531275Rat
2323787Rpl29-ps22ribosomal protein L29, pseudogene 22202553130625537882Rat
621263Pbld1phenazine biosynthesis-like protein domain containing 1202555127425566543Rat
2321665Pbld2phenazine biosynthesis-like protein domain containing 2202556824225603092Rat
1306162Taf9-psTAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor pseudogene202557648825577402Rat
1310019Hnrnph3heterogeneous nuclear ribonucleoprotein H3202561640025625814Rat
1592188Rufy2RUN and FYVE domain containing 2202562695825658157Rat
1306791Dna2DNA replication helicase/nuclease 2202566165225690598Rat
1311311Slc25a16solute carrier family 25 member 16202569147425717558Rat
40944525LOC120099058small nucleolar RNA SNORA70202571414025714275Rat
9165343Eloc-ps4elongin C, pseduogene 4202575415525754562Rat
41055569LOC120099054U6 spliceosomal RNA202575604125756149Rat
1310993Tet1tet methylcytosine dioxygenase 1202576104225840926Rat
6495981LOC100910945uncharacterized LOC100910945202576451225782723Rat
41060829LOC120098821uncharacterized LOC120098821202584558625852416Rat
631337Rwdd1RWD domain containing 1202594972325967147Rat
1595701Calhm4calcium homeostasis modulator family member 4202599016425993173Rat
2318506Trappc3ltrafficking protein particle complex subunit 3L202599283526084938Rat
1310405Calhm5calcium homeostasis modulator family member 5202606627026072348Rat
1304835Calhm6calcium homeostasis modulator family member 6202609559126097336Rat
1305079Dsedermatan sulfate epimerase202611819426196889Rat
1595702Eef1a1-ps5eukaryotic translation elongation factor 1 alpha 1, pseudogene 5202622143226222988Rat
1305732Gcc2GRIP and coiled-coil domain containing 2202624739426293613Rat
41069236LOC120099052U6 spliceosomal RNA202630168626301786Rat
1560732Lims1LIM zinc finger domain containing 1202630983326418511Rat
41050300LOC120099059small nucleolar RNA SNORD113/SNORD114 family202634681926346887Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10654D20Wox72692090086529008921Ratregion
11208D20Mgh32462034177563417890Ratregion
11208D20Mgh32462035168013516931Ratregion
11209D20Wox42412034177613417890Ratregion
11209D20Wox42412035168063516931Ratregion
34260D20Mgh51182090397199039825Ratregion
34280D20Mgh41062066915966691706Ratregion
34749D20UW11522036216493621791Ratregion
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5071940RH1353732052036519103652637Ratregion
5072084RH1366422152048941464894361Ratregion
5073814RH1376541392079303417930480Ratregion
5074022RH1377741552049786924978847Ratregion
5074096RH137818171202068951420689685Ratregion
5075544RH1386551712036243603624532Ratregion
5075544RH1386551712036243603624532Ratregion
5075798RH138803164201024116710241331Ratregion
5075828RH1388201922086784638678655Ratregion
5072310RH1367752292082863818286610Ratregion
5072472RH136869151202557708125577232Ratregion
5075548RH1386571672090099519010118Ratregion
5075904RH138864120201272127412721394Ratregion
5075944RH138887233201907049719070730Ratregion
5076142RH139003127202505294325053070Ratregion
5076142RH139003127202505294325053070Ratregion
5076172RH139021213202104538021045657Ratregion
5072552RH1369152162047070454707261Ratregion
5072552RH1369152162047070454707261Ratregion
5072582RH136932182201239582112396234Ratregion
5074708RH1381731592076575727657731Ratregion
5076652RH1393001602052825785282738Ratregion
5076770RH139368118201068855910688677Ratregion
5076798RH1393842042041357964136000Ratregion
5074778RH138213130202023642720236557Ratregion
5074808RH1382301212054873255487446Ratregion
5080620RH141685217201323047413230691Ratregion
5077124RH139575197201734200317342200Ratregion
5077356RH139709199201790410617904305Ratregion
5075934RH138882147201216314212163289Ratregion
5077478RH1397791982061265586127390Ratregion
5077632RH1398681912046563654656556Ratregion
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5079476RH1410201832091827539182936Ratregion
5076800RH139385111201740531417405425Ratregion
5076822RH1393982272046563174656544Ratregion
5075694RH1387421372049575204957657Ratregion
5076288RH1390891892041613384161713Ratregion
5077912RH1400322152069516406951855Ratregion
5078044RH140110180201237041612370596Ratregion
5076406RH1391571202096181679618287Ratregion
5077596RH1398472112060589326059143Ratregion
5078218RH1402122162056346275634843Ratregion
5077880RH140013218201028031510280533Ratregion
5078590RH1404321682069518436952011Ratregion
5078712RH140507173201734192317342096Ratregion
5079980RH1413132062049219834922189Ratregion
5080028RH1413412172068103206810537Ratregion
5078186RH1401931942038976813897875Ratregion
5078268RH140241168201204924912049417Ratregion
5078896RH1406141912049485254948716Ratregion
5080134RH141403202201727161917271821Ratregion
5078384RH140311186201333829813338484Ratregion
5078596RH140435131202469312424693255Ratregion
5070768RH1346932032099475869947792Ratregion
5070794RH134709185201075296310753149Ratregion
5070810RH134718193201209133912091532Ratregion
5079300RH1409011512029178632918014Ratregion
5070974RH1348141842040265584026742Ratregion
5073234RH137318182201227843912278621Ratregion
5073266RH1373361882077065407706728Ratregion
5080420RH1415691802033285753328755Ratregion
5080420RH1415691802033285753328755Ratregion
5080420RH1415691802034315273431707Ratregion
5080420RH1415691802034315273431707Ratregion
5080472RH1415982072073573127357519Ratregion
5078672RH1404821322041323614132493Ratregion
5078706RH140502126201209291412093040Ratregion
5078716RH1405092222049372124937434Ratregion
5071400RH1350601922037451353745327Ratregion
5070728RH1346702102068450556845265Ratregion
5073020RH1371882202073851447385364Ratregion
5073032RH1371952172095874429587654Ratregion
5071620RH135187195201157523711575432Ratregion
5071660RH1352112142041361834136397Ratregion
5074066RH137799135201075526510755581Ratregion
5073236RH137319163201302763413027797Ratregion
5074320RH137948229202041944820419672Ratregion
5074482RH138042138202104364221043780Ratregion
5071484RH1351092022070315107031712Ratregion
5073544RH137498214201157408811574302Ratregion
5074522RH138065173201362135013621523Ratregion
5071568RH1351571812070498107049991Ratregion
5061758AW533203134201041273810412872Ratregion
5063388BF398844174201161170711611881Ratregion
5065070BF405621164201870005718700221Ratregion
5066704AU0482001262046161384616264Ratregion
5067038AU048002209201484819114848400Ratregion
5067096AU047967289202503986625040155Ratregion
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5067274AU047855223202311514723115365Ratregion
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5070039RH94432197201364478413644981Ratregion
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5070135RH94492952046723604672455Ratregion
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5070211RH94536892047539554754044Ratregion
5070402AV0416581022065980016598103Ratregion
5070466AW047545117201360689713607014Ratregion
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5063988BE1203831532066557036655856Ratregion
5064040BE120517155201047248910472644Ratregion
5060934BE104822213201982440319824616Ratregion
5062572BE106868184201359409213594276Ratregion
5062800AW5345051512051008355100986Ratregion
5065798BE109889201201319248613192687Ratregion
5065894AA9979091322036054513605583Ratregion
5065970BE116351150201863963218639782Ratregion
5061942AI029839182201058548710585706Ratregion
5063532BE107756194201707832517078519Ratregion
5063718BF404641224201104119711041420Ratregion
5065438BE1154942122040909764091188Ratregion
5060532BE1102981582072117047212126Ratregion
5062390BF3978711872079107387910925Ratregion
5064018BI2960251602052320725232232Ratregion
5065642BF406112173201662579316625966Ratregion
5065842AI0455032142066205746621167Ratregion
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5062646BF403662922071906067190698Ratregion
5062728AW5341061762052273405227516Ratregion
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5061146BI2930461612032058003205961Ratregion
5062936BE1134821512041807094180860Ratregion
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5061244BI2935612002083390218339221Ratregion
5061252BF396000243202561795625618198Ratregion
5064718BE114994182201114644811146630Ratregion
5064726BE1084001762059054525905628Ratregion
5064772BF405081132201781856817818700Ratregion
5066352PMC162222P19282041494854150413Ratregion
5063170BE1138371692057714895771658Ratregion
5064956BF4053322002041246334125169Ratregion
5084112AI1755441742097045179704691Ratregion
5084144AI013181148202505216125052309Ratregion
5084144AI013181148202505216125052309Ratregion
5086913BM3868771742058901925890366Ratregion
5082179BI2803351552033769373377091Ratregion
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5087524PMC275438P17922075549357555727Ratregion
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5087560PMC314357P14892038713103871800Ratregion
5087757D10Bwg0447e173201135067711350850Ratregion
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5082835BF3902031652049645194964684Ratregion
5087518PMC26794P36722036230583623730Ratregion
5087518PMC26794P36722036230583623730Ratregion
5087530PMC275467P44792052011935201672Ratregion
5088937AU04885894201410088914100983Ratregion
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5089323AU049088185202130025721300442Ratregion
5089325AU049089135202545890725459042Ratregion
5089447AU049161131201362496013625093Ratregion
5083787AI5995271982051291445129342Ratregion
5083887AA892528237201273925512739492Ratregion
5088673AU048709235202334462223344857Ratregion
5088673AU048709235202334464623344857Ratregion
5088853AU0488091972046094154609612Ratregion
5090575AU049833183202568547925685664Ratregion
5081549AW4338361522093419539342105Ratregion
5084460AI1768041012041517444151845Ratregion
5084500AI2352232242048521044852328Ratregion
5084508AI409737148201000669310006841Ratregion
5084518AI1775601112034447173445771Ratregion
5084572AI0139412282040870984087326Ratregion
5084590AA94575396201242033912420435Ratregion
5084720AI0082581242050565025056626Ratregion
5090295AU049666171202117125921171428Ratregion
5084332AI176591952091849869185081Ratregion
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5081861BE118577217201768628417686501Ratregion
5081951BF415458123201282013412820257Ratregion
5085062Lrrc3251201076028810760539Ratregion
5087968Itgb2108201106174511061853Ratregion
5090693AU049904188202455662224556810Ratregion
5088475AU0485911162075756357575751Ratregion
5080926RH1418631892072081737208362Ratregion
5080934RH1418682082049225914922798Ratregion
5081188RH142015195201051332010513515Ratregion
5089999AU049490166202306119623061362Ratregion
5081384AI4539612092041482174148512Ratregion
5082507BF416192241201078569410785935Ratregion
5086048AW5294181672060756186075785Ratregion
5080880RH141836192201049711610497308Ratregion
5084506AI235289157201940945319409610Ratregion
5086141AI102469154201016699110167145Ratregion
5081234RH1420432062036937483693954Ratregion
5084822AI411563902074413197441409Ratregion
5086553BM3858171882048243484824536Ratregion
5081567BE1174011982086368768637074Ratregion
5081613BE1176321652071008487101013Ratregion
5085187Trpm2-predicted159201072953010730493Ratregion
5085555BM390539160202505177025051930Ratregion
5085555BM390539160202505177025051930Ratregion
5085645BI2767031572063863916386548Ratregion
5085689BM3834641752034224963422670Ratregion
5085772BF4167341212056322905632411Ratregion
5084022AI2324781342049214324921566Ratregion
5502649RH1262880201016846910168922Ratregion
5502649RH1262880201023157510232021Ratregion
5503258UniSTS:2376241832049663694966552Ratregion
5503262UniSTS:2376262382048168724817110Ratregion
5503354CGCb741762047316994731873Ratregion
5503354CGCb741762047316994731873Ratregion
5503520H2-Ke610272048273294828356Ratregion
5503522UniSTS:46341511942050098835011077Ratregion
5503524Slc39a712342048251084826342Ratregion
5503528UniSTS:46343714872049247334926220Ratregion
5507585Aif102036510593651818Ratregion
5503506Pim14922075553097555801Ratregion
5503560UniSTS:46395902036228633623794Ratregion
5503560UniSTS:46395902036228633623794Ratregion
5503648UniSTS:4654675612041616764162237Ratregion
5503827MARC_45796-45797:1102976080:113122063583066359618Ratregion
5503833MARC_45800-45801:1102973340:202063608796361416Ratregion
5504125UniSTS:259034246201132403511325235Ratregion
5504129UniSTS:2590351122201040028910401411Ratregion
5504137ORF661487201216570212167189Ratregion
5504143UniSTS:2591684722090772909077762Ratregion
5504522PMC26660P43182029155792915897Ratregion
5504133UniSTS:2590800201205739712058397Ratregion
5504185UniSTS:259631287201076035510760642Ratregion
5504192UniSTS:259664489201049692210497411Ratregion
5504194Rsph16412093503979351038Ratregion
5504578PMC307617P22172071574527157669Ratregion
5505982UniSTS:4967391022029289402929042Ratregion
5505913UniSTS:49603314182063595076360925Ratregion
5506310Tap214532046374924638945Ratregion
5506310Tap214532046374924638945Ratregion
5506169UniSTS:4985067482037451873745935Ratregion
5506207Pou5f11772032233763223553Ratregion
5506231Clic11552037650253765180Ratregion
5507243AW539211922082792038279295Ratregion
5499635MARC_5887-5888:991939775:17322041545724155304Ratregion
5500011UniSTS:2361251432050112135011477Ratregion
5499619MARC_3347-3348:991937077:11952037040623705128Ratregion
5500941MARC_9679-9680:996688523:1241201276513712765917Ratregion
5500412GDB:5550190202622304826223270Ratregion
5500469RH12686602036798163680353Ratregion
5500302D20S108075202133248921332564Ratregion
5502481RH1250590201334525913346323Ratregion
5502729BCR88201359539713595485Ratregion
5500507RH12688102035725693572935Ratregion
5503264UniSTS:2376302142040999204100134Ratregion
5501067PMC133764P31582075551607555318Ratregion
5501069PMC133764P41372075551817555318Ratregion
5501037PMC125030P13812071573767157757Ratregion
5501047PMC126110P12042071575817158367Ratregion
5501107PMC137182P91052063607786360883Ratregion
5501143PMC149170P14462071574077158435Ratregion
5500999PMC114802P23802071573777157757Ratregion
5501516RH358712462036778353678288Ratregion
5501760MARC_11957-11958:1003854518:15572036629913663548Ratregion
5501728UniSTS:2670092022029158572916059Ratregion
5501954MARC_20758-20759:1025103834:102095568539557699Ratregion
5505618UniSTS:4856020202438548524385544Ratregion
5506624SFRS3_18756122071003307100942Ratregion
5502146MARC_5857-5858:997299374:102036512403651828Ratregion
5502150MARC_6301-6302:997299518:102048177794818347Ratregion
5502124MARC_5045-5046:996690083:15632036726193673182Ratregion
5502132MARC_5411-5412:996690356:11742036763813676960Ratregion
5502299RH1243321632041324554132618Ratregion
5502307RH124339154202575424025754394Ratregion
5502307RH124339154202575424025754394Ratregion
5502325RH124528249202532743725327686Ratregion
Position Markers

Flank 1: (D20Rat46)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2202,892,597 - 2,892,739 (+)MAPPER
Rnor_6.0203,402,111 - 3,402,252NCBI
Rnor_5.0205,499,214 - 5,499,355UniSTS
RGSC_v3.4203,040,047 - 3,040,188UniSTS
RGSC_v3.4203,039,759 - 3,040,216RGD
RGSC_v3.1203,040,274 - 3,040,415RGD
Celera20318,520 - 318,661UniSTS
RH 3.4 Map2052.42RGD
RH 3.4 Map2052.42UniSTS
RH 2.0 Map2011.6RGD
SHRSP x BN Map200.0RGD
Cytogenetic Map20p12UniSTS
Flank 2: (D20Rat34)
Rat AssemblyChrPosition (strand)Source
mRatBN7.22026,381,814 - 26,381,954 (+)MAPPER
Rnor_6.02027,968,077 - 27,968,216NCBI
Rnor_5.02029,787,562 - 29,787,701UniSTS
RGSC_v3.42037,383,774 - 37,383,914RGD
RGSC_v3.42037,383,775 - 37,383,914UniSTS
RGSC_v3.12037,397,574 - 37,397,714RGD
Celera2027,833,251 - 27,833,386UniSTS
SHRSP x BN Map2021.46UniSTS
SHRSP x BN Map2021.46RGD
FHH x ACI Map2012.4099RGD
Cytogenetic Map20q11UniSTS


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
724519Bp144Blood pressure QTL 1440.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)2013624629Rat
1354642Despr15Despair related QTL 150.0027locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)20124159021Rat
1600382Edcs3Endometrial carcinoma susceptibility QTL33.50.003uterus morphology trait (VT:0001120)percentage of study population developing endometrioid carcinoma during a period of time (CMO:0001759)20125159026Rat
2317851Alcrsp22Alcohol response QTL 223.20.05response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)20127339237Rat
1641893Alcrsp7Alcohol response QTL 7response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)20127339237Rat
8694189Bw153Body weight QTL 1533.130.001body mass (VT:0001259)body weight gain (CMO:0000420)20129191651Rat
9590275Scort15Serum corticosterone level QTL 153.480.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)20129191651Rat
7411650Foco23Food consumption QTL 2320.70.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)20129191651Rat
9590109Sffal8Serum free fatty acids level QTL 85.320.01blood free fatty acid amount (VT:0001553)plasma free fatty acids level (CMO:0000546)20129191651Rat
9589155Insul32Insulin level QTL 326.380.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)20129191651Rat
6893685Bw111Body weight QTL 1112.70.004body mass (VT:0001259)body weight (CMO:0000012)20132578807Rat
7411668Foco32Food consumption QTL 3280.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)20136600972Rat
9590252Scort12Serum corticosterone level QTL 1220.460.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)20136600972Rat
2305926Iddm37Insulin dependent diabetes mellitus QTL 376blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)20152784246527842Rat
2306850Pia40Pristane induced arthritis QTL 400.0001joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)2015279595304575Rat
1641915Colcr9Colorectal carcinoma resistance QTL 92.970.0024intestine integrity trait (VT:0010554)benign colorectal tumor number (CMO:0001795)20153065546530655Rat
1598816Memor12Memory QTL 122.4exploratory behavior trait (VT:0010471)average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)20260683647606836Rat
61448Ciaa1CIA Autoantibody QTL 1300.001blood autoantibody amount (VT:0003725)calculated serum anti-rat type 2 collagen autoantibody titer (CMO:0001281)2026463954597031Rat
61472Aia1Adjuvant induced arthritis QTL 1180.001joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)2026463954597031Rat
2317057Aia27Adjuvant induced arthritis QTL 272.83joint integrity trait (VT:0010548)right rear ankle joint diameter (CMO:0002150)20289259726381954Rat
1300152Bp195Blood pressure QTL 1953.46arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2036216499243559Rat
1331772Cdexp2CD45RC expression in CD8 T cells QTL 25.7CD8-positive T cell quantity (VT:0008077)blood CD45RC(high) CD8 T cell count to CD45RC(low) CD8 T cell count ratio (CMO:0001990)20362164910078919Rat
737973Pia21Pristane induced arthritis QTL 214.8joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)2036216564606812Rat
61432Cia1Collagen induced arthritis QTL 1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)20362165614101050Rat
7175099Tcs2T cell selection QTL 2T cell selectionexpression2045040024693102Rat
61474Eae1Experimental allergic encephalomyelitis QTL 13nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis severity score (CMO:0001419)2046066076691706Rat
4889857Pur27Proteinuria QTL 2712.20.001urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)20460660717617956Rat
1558640Prcs2Prostate cancer susceptibility QTL 23.3prostate integrity trait (VT:0010571)percentage of study population developing ventral prostate tumorous lesions during a period of time (CMO:0000943)20460660717617956Rat
7175096Tcs1T cell selection QTL 1T cell selectionexpression2047270785024580Rat
70154Insul2Insulin level QTL 23.75blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)20669170617489458Rat
1581577Pur15Proteinuria QTL 154.380.0002urine total protein amount (VT:0000032)urine protein excretion rate (CMO:0000759)20804241017617956Rat
4889870Pur30Proteinuria QTL 30190.005urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)20804241029322208Rat
631265Iresp1Immunoglobin response QTL18.3blood anti-double stranded DNA antibody amount (VT:0004762)serum anti-DNA antibody level (CMO:0001533)20903971913461775Rat
7411652Foco24Food consumption QTL 240.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)201175751554435887Rat
9590092Insglur9Insulin/glucose ratio QTL 918.380.001blood insulin amount (VT:0001560)calculated plasma insulin level (CMO:0002170)201175751554435887Rat
4889610Pancm3Pancreatic morphology QTL 33.750.001pancreas mass (VT:0010144)pancreas wet weight (CMO:0000626)201761783247606836Rat
2317880Alcrsp25Alcohol response QTL 252.3response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)201769755054435887Rat
2303626Vencon10Ventilatory control QTL 100.001respiration trait (VT:0001943)respiration rate (CMO:0000289)201919072154435887Rat
2303578Gluco50Glucose level QTL 502blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)202510672254435887Rat
2303587Bw93Body weight QTL 9313body mass (VT:0001259)body weight (CMO:0000012)202510672254435887Rat
2300188Bmd68Bone mineral density QTL 686.40.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)202510672254435887Rat
1331747Hrtrt16Heart rate QTL 163.163heart pumping trait (VT:2000009)heart rate (CMO:0000002)202520973454435887Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_cross_type intercross  
qtl_general measurement method: animals were anesthetized, intestines exposed and 0.05 mL PG-PS suspension was injected; after 24 days these animals were exsanguinated and joint diameter of the right rear ankle measured on 17th day of the treatment 2316974
qtl_general number of animals used: 168 F2 females 2316974
qtl_general inducing agent: peptidoglycan-polysaccharide (PG-PS) polymers 2316974
qtl_general software used: MapQTL software, Student's t-tests, median tests 2316974
qtl_general on day 24 LOD=2.92 2316974