Gene: Pou5f1 (POU class 5 homeobox 1) Rattus norvegicus
Symbol: Pou5f1
Name: POU class 5 homeobox 1
Description: ENCODES a protein that exhibits DNA binding transcription factor activity; HMG box domain binding; POU domain binding; INVOLVED IN regulation of transcription, DNA-templated; response to cytokine; blastocyst development (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; ASSOCIATED WITH Amphetamine-Related Disorders (ortholog); Carcinoma in Situ (ortholog); Carcinoma, Embryonal (ortholog); FOUND IN nucleus; cytoplasm (ortholog); cytosol (ortholog); INTERACTS WITH 3-isobutyl-1-methyl-7H-xanthine; bisphenol A; cadmium dichloride
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: POU domain, class 5, transcription factor 1
Homo sapiens (human) : POU5F1 (POU class 5 homeobox 1)  HGNC  Alliance
Mus musculus (house mouse) : Pou5f1 (POU domain, class 5, transcription factor 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Pou5f1 (POU class 5 homeobox 1)
Pan paniscus (bonobo/pygmy chimpanzee) : POU5F1 (POU class 5 homeobox 1)
Canis lupus familiaris (dog) : POU5F1 (POU class 5 homeobox 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Pou5f1 (POU class 5 homeobox 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Rat AssemblyChrPosition (strand)SourceGenome Browsers
Rnor_6.0203,747,231 - 3,751,994 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0205,833,973 - 5,838,736 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera20650,325 - 655,095 (-)NCBICelera
Cytogenetic Map20p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)

Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals


Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status


Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants

Additional Information

External Database Links
Nomenclature History
More on Pou5f1
Alliance Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1359491
Created: 2005-07-29
Species: Rattus norvegicus
Last Modified: 2018-03-20
Status: ACTIVE