ONTOLOGY REPORT - ANNOTATIONS
Term: axon development
Accession: GO:0061564
browse the term
Definition: The progression of an axon over time. Covers axonogenesis (de novo generation of an axon) and axon regeneration (regrowth), as well as processes pertaining to the progression of the axon over time (fasciculation and defasciculation).
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Ank3
ankyrin 3
IMP
RGD
PMID:27098687
RGD:11535813
NCBI chr20:18,602,267...19,225,831
Ensembl chr20:18,602,786...19,086,300
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Ap5z1
adaptor related protein complex 5 subunit zeta 1
acts_upstream_of_or_within
ISO
MGI:4460281 (PMID:30930081)
RGD
PMID:30930081
NCBI chr12:12,093,834...12,109,043
Ensembl chr12:12,093,834...12,108,511
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Atoh1
atonal bHLH transcription factor 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 4:93,912,068...93,914,163
Ensembl chr 4:93,912,068...93,914,154
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Atoh7
atonal bHLH transcription factor 7
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:25,530,826...25,531,275
Ensembl chr20:25,530,826...25,531,275
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Bex1
brain expressed X-linked 1
acts_upstream_of_or_within
ISO
MGI:96912 (PMID:20731761)
RGD
PMID:20731761
NCBI chr X:99,219,014...99,220,518
Ensembl chr X:99,219,014...99,220,958
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Bhlha15
basic helix-loop-helix family, member a15
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr12:10,420,465...10,424,641
Ensembl chr12:10,420,467...10,424,713
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Bhlhe22
basic helix-loop-helix family, member e22
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 2:100,486,400...100,489,510
Ensembl chr 2:100,486,400...100,489,510
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Bhlhe23
basic helix-loop-helix family, member e23
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 3:167,889,009...167,891,223
Ensembl chr 3:167,889,009...167,891,223
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Borcs7
BLOC-1 related complex subunit 7
acts_upstream_of_or_within
ISO
(PMID:30067980)
RGD
PMID:30067980
NCBI chr 1:245,564,347...245,578,182
Ensembl chr 1:245,564,369...245,579,343
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Cacna1c
calcium voltage-gated channel subunit alpha1 C
IEP
RGD
PMID:22473424
RGD:10411906
NCBI chr 4:151,764,138...152,379,454
Ensembl chr 4:151,764,138...152,379,648
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Camsap2
calmodulin regulated spectrin-associated protein family, member 2
involved_in
ISO IMP
(PMID:24908486)
RGD
PMID:24908486 PMID:24908486
RGD:13441206
NCBI chr13:47,723,251...47,802,606
Ensembl chr13:47,723,121...47,802,597
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Dcc
DCC netrin 1 receptor
IEP
RGD
PMID:22473424
RGD:10411906
NCBI chr18:64,868,987...65,972,783
Ensembl chr18:64,873,898...65,972,740
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Ddr1
discoidin domain receptor tyrosine kinase 1
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:10970885) GO_REF:0000107
RGD Ensembl
PMID:10970885
GO_REF:0000107
NCBI chr20:3,042,494...3,064,442
Ensembl chr20:3,044,320...3,064,468
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Dynlt1
dynein light chain Tctex-type 1
IDA
RGD
PMID:15992542
RGD:8553295
NCBI chr 1:46,887,017...46,893,956
Ensembl chr 1:46,887,017...46,893,881
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Epb41l3
erythrocyte membrane protein band 4.1-like 3
involved_in
ISO
MGI:5140703 (PMID:21632923)
RGD
PMID:21632923
NCBI chr 9:109,056,178...109,260,607
Ensembl chr 9:109,016,113...109,260,607
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Gpm6b
glycoprotein m6b
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr X:28,057,788...28,204,409
Ensembl chr X:28,059,450...28,204,211
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Grm7
glutamate metabotropic receptor 7
involved_in
IEA ISO ISS
GO_REF:0000107 (PMID:33500274) GO_REF:0000024
Ensembl RGD UniProt
PMID:33500274
GO_REF:0000024 GO_REF:0000107
NCBI chr 4:143,730,862...144,613,230
Ensembl chr 4:143,731,259...144,612,344
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Kcna1
potassium voltage-gated channel subfamily A member 1
IEP
RGD
PMID:22473424
RGD:10411906
NCBI chr 4:159,464,223...159,472,905
Ensembl chr 4:159,464,188...159,472,682
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Kcnc4
potassium voltage-gated channel subfamily C member 4
IEP
RGD
PMID:22473424
RGD:10411906
NCBI chr 2:195,063,967...195,100,244
Ensembl chr 2:195,071,769...195,099,233
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L1cam
L1 cell adhesion molecule
involved_in
ISO ISS
(PMID:20621658) GO_REF:0000024
RGD UniProt
PMID:20621658
GO_REF:0000024
NCBI chr X:151,597,270...151,623,776
Ensembl chr X:151,597,277...151,623,857
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Mapk8ip3
mitogen-activated protein kinase 8 interacting protein 3
involved_in
IMP ISO
PMID:25944905 (PMID:23576431), (PMID:25944905)
RGD
PMID:23576431 PMID:25944905 PMID:25944905 PMID:23576431
RGD:13673780 , RGD:13673742
NCBI chr10:13,918,417...13,958,335
Ensembl chr10:13,918,400...13,958,273
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Mark2
microtubule affinity regulating kinase 2
involved_in
IMP
PMID:16717194
ARUK-UCL
PMID:16717194
RGD:13602002
NCBI chr 1:204,461,029...204,526,247
Ensembl chr 1:204,461,030...204,525,652
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Mgarp
mitochondria-localized glutamic acid-rich protein
involved_in
ISO
(PMID:24323429)
RGD
PMID:24323429
NCBI chr 2:135,431,283...135,439,425
Ensembl chr 2:135,431,283...135,439,612
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Nefh
neurofilament heavy chain
involved_in
ISO IBA
(PMID:7536898) (PMID:9763431) GO_REF:0000033
RGD GO_Central
PMID:7536898 PMID:9763431
GO_REF:0000033
NCBI chr14:79,830,362...79,840,347
Ensembl chr14:79,830,362...79,840,351
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Neurod1
neuronal differentiation 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 3:64,359,554...64,363,526
Ensembl chr 3:64,359,395...64,363,649
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Neurod2
neuronal differentiation 2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr10:83,323,801...83,327,986
Ensembl chr10:83,324,442...83,327,986
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Neurod4
neuronal differentiation 4
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 7:7,090,048...7,102,018
Ensembl chr 7:7,090,045...7,102,030
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Neurod6
neuronal differentiation 6
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 4:84,846,659...84,849,905
Ensembl chr 4:84,846,231...84,849,999
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Neurog1
neurogenin 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr17:8,362,878...8,364,397
Ensembl chr17:8,362,821...8,364,571
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Neurog2
neurogenin 2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 2:216,092,709...216,095,276
Ensembl chr 2:216,093,363...216,094,154
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Neurog3
neurogenin 3
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:30,079,780...30,081,262
Ensembl chr20:30,079,780...30,081,262
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Olig1
oligodendrocyte transcription factor 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr11:30,514,379...30,516,521
Ensembl chr11:30,514,379...30,516,521
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Olig2
oligodendrocyte transcription factor 2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr11:30,475,510...30,478,886
Ensembl chr11:30,475,398...30,480,152
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Olig3
oligodendrocyte transcription factor 3
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:14,081,259...14,083,336
Ensembl chr 1:14,081,328...14,082,149
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Plp1
proteolipid protein 1
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 MGI:1917997 (PMID:24038504)
GO_Central RGD
PMID:24038504
GO_REF:0000033
NCBI chr X:100,184,039...100,201,035
Ensembl chr X:100,185,767...100,201,032
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Pmp22
peripheral myelin protein 22
acts_upstream_of_or_within
ISO
MGI:2447704 (PMID:20071523)
RGD
PMID:20071523
NCBI chr10:47,795,709...47,825,715
Ensembl chr10:47,795,709...47,825,714
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Scn2a
sodium voltage-gated channel alpha subunit 2
IEP
RGD
PMID:22473424
RGD:10411906
NCBI chr 3:50,302,781...50,437,504
Ensembl chr 3:50,302,877...50,437,214
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Slc25a46
solute carrier family 25, member 46
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr18:23,215,954...23,244,917
Ensembl chr18:23,215,962...23,244,314
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Svbp
small vasohibin binding protein
involved_in
ISO ISS
(PMID:31324789) GO_REF:0000024
RGD UniProt
PMID:31324789
GO_REF:0000024
NCBI chr 5:132,808,021...132,813,735
Ensembl chr 5:132,808,204...132,813,735
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Tbc1d24
TBC1 domain family, member 24
acts_upstream_of_or_within
ISO
MGI:5692831 (PMID:30335140)
RGD
PMID:30335140
NCBI chr10:13,205,819...13,236,013
Ensembl chr10:13,209,895...13,236,050
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Trim32
tripartite motif-containing 32
acts_upstream_of_or_within
ISO
MGI:3837468 (PMID:19155210)
RGD
PMID:19155210
NCBI chr 5:79,005,139...79,016,615
Ensembl chr 5:78,999,389...79,022,018
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Tspan2
tetraspanin 2
acts_upstream_of_or_within
ISO
MGI:97623 (PMID:24038504)
RGD
PMID:24038504
NCBI chr 2:190,177,717...190,234,994
Ensembl chr 2:190,177,741...190,219,660
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Vash2
vasohibin 2
involved_in
ISO
(PMID:31324789)
RGD
PMID:31324789
NCBI chr13:102,529,718...102,561,204
Ensembl chr13:102,529,719...102,560,391
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Zpr1
ZPR1 zinc finger
involved_in
ISO IBA
(PMID:22422766) (PMID:15767679), (PMID:16648254), (PMID:22422766) GO_REF:0000033
RGD GO_Central
PMID:15767679 PMID:16648254 PMID:22422766
GO_REF:0000033
NCBI chr 8:46,564,898...46,574,719
Ensembl chr 8:46,565,146...46,574,719
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Bhlhe22
basic helix-loop-helix family, member e22
acts_upstream_of_or_within
ISO
MGI:4440742 (PMID:22284184)
RGD
PMID:22284184
NCBI chr 2:100,486,400...100,489,510
Ensembl chr 2:100,486,400...100,489,510
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Draxin
dorsal inhibitory axon guidance protein
involved_in
ISO
(PMID:23206892)
RGD
PMID:23206892
NCBI chr 5:158,530,149...158,563,457
Ensembl chr 5:158,530,342...158,564,483
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Fbxo45
F-box protein 45
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3849742 (PMID:19398581)
Ensembl RGD
PMID:19398581
GO_REF:0000107
NCBI chr11:68,551,430...68,567,053
Ensembl chr11:68,551,122...68,566,800
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Nfib
nuclear factor I/B
involved_in
ISS ISO
GO_REF:0000024 (PMID:19961580)
UniProt RGD
PMID:19961580
GO_REF:0000024
NCBI chr 5:96,759,208...96,974,001
Ensembl chr 5:96,764,653...96,975,479
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Nr2e1
nuclear receptor subfamily 2, group E, member 1
acts_upstream_of_or_within
ISO
MGI:2176490 (PMID:11997145)
RGD
PMID:11997145
NCBI chr20:46,050,134...46,071,257
Ensembl chr20:46,050,414...46,073,949
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Plxna4
plexin A4
acts_upstream_of_or_within
ISO
MGI:3578655 (PMID:15814794)
RGD
PMID:15814794
NCBI chr 4:60,720,246...61,162,206
Ensembl chr 4:60,720,255...61,162,206
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Tsku
tsukushi, small leucine rich proteoglycan
involved_in acts_upstream_of_or_within
IEA ISO ISS
GO_REF:0000107 (PMID:23206892) MGI:4867728 (PMID:21055390) GO_REF:0000024
Ensembl RGD UniProt
PMID:21055390 PMID:23206892
GO_REF:0000024 GO_REF:0000107
NCBI chr 1:152,660,259...152,671,682
Ensembl chr 1:152,656,693...152,672,588
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Wdr47
WD repeat domain 47
acts_upstream_of_or_within
ISO
MGI:4433065|MGI:6102912 (PMID:29078390)
RGD
PMID:29078390
NCBI chr 2:196,226,757...196,287,739
Ensembl chr 2:196,205,238...196,287,739
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Dcc
DCC netrin 1 receptor
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:18479186)
Ensembl RGD
PMID:18479186
GO_REF:0000107
NCBI chr18:64,868,987...65,972,783
Ensembl chr18:64,873,898...65,972,740
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Ntn1
netrin 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:18479186)
Ensembl RGD
PMID:18479186
GO_REF:0000107
NCBI chr10:52,899,933...53,098,591
Ensembl chr10:52,899,934...53,085,326
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Unc5a
unc-5 netrin receptor A
involved_in acts_upstream_of_or_within
IEA ISO IBA
GO_REF:0000107 (PMID:18479186) GO_REF:0000033
Ensembl RGD GO_Central
PMID:18479186
GO_REF:0000033 GO_REF:0000107
NCBI chr17:9,614,841...9,670,558
Ensembl chr17:9,614,838...9,670,526
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Unc5b
unc-5 netrin receptor B
involved_in acts_upstream_of_or_within
IEA ISO IBA
GO_REF:0000107 (PMID:18479186) GO_REF:0000033
Ensembl RGD GO_Central
PMID:18479186
GO_REF:0000033 GO_REF:0000107
NCBI chr20:28,697,726...28,764,474
Ensembl chr20:28,697,726...28,764,537
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Unc5c
unc-5 netrin receptor C
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:18479186)
Ensembl RGD
PMID:18479186
GO_REF:0000107
NCBI chr 2:230,180,353...230,535,219
Ensembl chr 2:230,180,951...230,535,217
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Ssna1
SS nuclear autoantigen 1
involved_in
ISO
(PMID:25390646)
RGD
PMID:25390646
NCBI chr 3:8,084,949...8,086,417
Ensembl chr 3:8,084,974...8,086,356
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Efnb3
ephrin B3
acts_upstream_of_or_within
ISO
MGI:3026700 (PMID:11182083)
RGD
PMID:11182083
NCBI chr10:54,274,506...54,281,951
Ensembl chr10:54,274,506...54,280,471
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Gap43
growth associated protein 43
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 MGI:2448337 (PMID:7859286)
GO_Central RGD
PMID:7859286
GO_REF:0000033
NCBI chr11:58,376,371...58,470,047
Ensembl chr11:58,376,371...58,470,045
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Auts2
activator of transcription and developmental regulator AUTS2
involved_in
ISO
(PMID:25533347)
RGD
PMID:25533347
NCBI chr12:24,104,187...25,194,123
Ensembl chr12:24,104,192...25,194,416
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Bdnf
brain-derived neurotrophic factor
acts_upstream_of_or_within
ISO
(PMID:24035762)
RGD
PMID:24035762
NCBI chr 3:96,165,042...96,215,621
Ensembl chr 3:96,165,042...96,215,615
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Cdh4
cadherin 4
involved_in acts_upstream_of
IEA ISO
GO_REF:0000107 (PMID:14586016)
Ensembl RGD
PMID:14586016
GO_REF:0000107
NCBI chr 3:166,525,092...167,003,380
Ensembl chr 3:166,525,099...167,003,371
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Cdk5
cyclin-dependent kinase 5
involved_in
TAS
PMID:11276227
UniProt
PMID:11276227
RGD:8554712
NCBI chr 4:10,754,682...10,760,110
Ensembl chr 4:10,754,687...10,760,112
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Cdk5r1
cyclin-dependent kinase 5 regulatory subunit 1
involved_in
TAS
PMID:11276227
UniProt
PMID:11276227
RGD:8554712
NCBI chr10:65,484,266...65,485,467
Ensembl chr10:65,483,941...65,488,456
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Cyfip1
cytoplasmic FMR1 interacting protein 1
involved_in
ISO
(PMID:16260607)
RGD
PMID:16260607
NCBI chr 1:106,710,924...106,799,393
Ensembl chr 1:106,711,016...106,799,386
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Dclk1
doublecortin-like kinase 1
involved_in acts_upstream_of_or_within
IEA IBA ISO
GO_REF:0000107 GO_REF:0000033 MGI:1277171 (PMID:16387638)
Ensembl GO_Central RGD
PMID:16387638
GO_REF:0000033 GO_REF:0000107
NCBI chr 2:139,417,234...139,710,956
Ensembl chr 2:139,417,163...139,710,956
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Dcx
doublecortin
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1330861 (PMID:16387638)
Ensembl RGD
PMID:16387638
GO_REF:0000107
NCBI chr X:107,430,767...107,573,612
Ensembl chr X:107,430,767...107,507,476
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Dvl1
dishevelled segment polarity protein 1
acts_upstream_of_or_within
ISO
(PMID:18716223)
RGD
PMID:18716223
NCBI chr 5:166,456,989...166,468,733
Ensembl chr 5:166,456,686...166,468,664
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Edn1
endothelin 1
involved_in
ISO
(PMID:18401410)
RGD
PMID:18401410
NCBI chr17:22,454,924...22,460,812
Ensembl chr17:22,454,420...22,460,885
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Edn2
endothelin 2
involved_in
IEA ISO
GO_REF:0000107 (PMID:18401410)
Ensembl RGD
PMID:18401410
GO_REF:0000107
NCBI chr 5:133,751,316...133,756,814
Ensembl chr 5:133,751,217...133,756,814
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Edn3
endothelin 3
involved_in
ISO
(PMID:18401410)
RGD
PMID:18401410
NCBI chr 3:163,562,307...163,586,636
Ensembl chr 3:163,562,520...163,585,093
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Ednra
endothelin receptor type A
involved_in
IEA ISO
GO_REF:0000107 (PMID:18401410)
Ensembl RGD
PMID:18401410
GO_REF:0000107
NCBI chr19:30,233,540...30,303,727
Ensembl chr19:30,233,571...30,297,049
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Gsk3b
glycogen synthase kinase 3 beta
acts_upstream_of
ISO
MGI:106658|MGI:98927 (PMID:24623780)
RGD
PMID:24623780
NCBI chr11:62,498,997...62,648,665
Ensembl chr11:62,504,316...62,648,646
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Itgb1
integrin subunit beta 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1306826 (PMID:12879062)
Ensembl RGD
PMID:12879062
GO_REF:0000107
NCBI chr19:56,705,123...56,753,199
Ensembl chr19:56,705,171...56,753,195
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Lhx2
LIM homeobox 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:21857657)
Ensembl RGD
PMID:21857657
GO_REF:0000107
NCBI chr 3:22,113,619...22,143,909
Ensembl chr 3:22,126,007...22,143,908
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Limk1
LIM domain kinase 1
involved_in acts_upstream_of
IEA ISO
GO_REF:0000107 MGI:1921382 (PMID:16204183)
Ensembl RGD
PMID:16204183
GO_REF:0000107
NCBI chr12:22,026,697...22,060,605
Ensembl chr12:22,026,672...22,060,606
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Map1b
microtubule-associated protein 1B
acts_upstream_of_or_within
ISO
MGI:2148182 (PMID:16536727)
RGD
PMID:16536727
NCBI chr 2:30,817,261...30,910,458
Ensembl chr 2:30,817,261...30,910,317
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Mapt
microtubule-associated protein tau
acts_upstream_of_or_within
ISO
MGI:2385630 (PMID:11891784), (PMID:16536727), (PMID:20338169)
RGD
PMID:11891784 PMID:16536727 PMID:20338169
NCBI chr10:89,138,644...89,236,137
Ensembl chr10:89,138,627...89,236,129
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Mir124-1
microRNA 124-1
acts_upstream_of_or_within
ISO
MGI:3618700 (PMID:21857657)
RGD
PMID:21857657
NCBI chr15:38,842,014...38,842,098
Ensembl chr15:38,842,014...38,842,098
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Mir124-2
microRNA 124-2
acts_upstream_of_or_within
ISO
MGI:2676807 (PMID:21857657)
RGD
PMID:21857657
NCBI chr 2:100,134,866...100,134,974
Ensembl chr 2:100,134,866...100,134,974
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Ndn
necdin, MAGE family member
acts_upstream_of_or_within
ISO
MGI:2653048 (PMID:15972963)
RGD
PMID:15972963
NCBI chr 1:115,849,168...115,850,767
Ensembl chr 1:115,849,105...115,850,767
G
Ngf
nerve growth factor
acts_upstream_of
ISO
(PMID:8861722)
RGD
PMID:8861722
NCBI chr 2:189,901,058...189,954,452
Ensembl chr 2:189,901,058...189,954,452
G
Nlgn3
neuroligin 3
involved_in
IMP
PMID:19406211
BHF-UCL
PMID:19406211
RGD:8554851
NCBI chr X:66,427,926...66,457,378
Ensembl chr X:66,429,458...66,451,876
G
Nrp1
neuropilin 1
acts_upstream_of
ISO
MGI:107558 (PMID:12852851)
RGD
PMID:12852851
NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
G
Pou4f2
POU class 4 homeobox 2
acts_upstream_of_or_within
ISO
MGI:102523 (PMID:11807038)
RGD
PMID:11807038
NCBI chr19:29,486,686...29,490,327
Ensembl chr19:29,486,686...29,490,327
G
Pou4f3
POU class 4 homeobox 3
acts_upstream_of_or_within
ISO
MGI:102524 (PMID:11807038)
RGD
PMID:11807038
NCBI chr18:34,390,205...34,392,797
Ensembl chr18:34,390,205...34,392,797
G
Raph1
Ras association (RalGDS/AF-6) and pleckstrin homology domains 1
acts_upstream_of_or_within
ISO
(PMID:20417104)
RGD
PMID:20417104
NCBI chr 9:61,907,476...61,990,170
Ensembl chr 9:61,907,758...61,961,209
G
RGD1359108
similar to RIKEN cDNA 3110043O21
involved_in
IEA ISO ISS
GO_REF:0000107 (PMID:27723745) GO_REF:0000024
Ensembl RGD UniProt
PMID:27723745
GO_REF:0000024 GO_REF:0000107
NCBI chr 5:49,766,340...49,791,434
Ensembl chr 5:49,766,325...49,791,408
G
Rnf6
ring finger protein 6
acts_upstream_of
ISO
MGI:104572 (PMID:16204183)
RGD
PMID:16204183
NCBI chr12:8,816,797...8,826,870
Ensembl chr12:8,816,833...8,826,847
G
Sema3a
semaphorin 3A
acts_upstream_of
ISO
MGI:106206 (PMID:12852851)
RGD
PMID:12852851
NCBI chr 4:21,282,398...21,754,834
Ensembl chr 4:21,287,982...21,494,432
G
Sema5a
semaphorin 5A
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 MGI:107555 (PMID:21835343)
GO_Central RGD
PMID:21835343
GO_REF:0000033
NCBI chr 2:83,309,843...83,741,084
Ensembl chr 2:83,309,843...83,741,084
G
Sema5b
semaphorin 5B
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 MGI:107556 (PMID:21835343)
GO_Central RGD
PMID:21835343
GO_REF:0000033
NCBI chr11:65,102,532...65,225,456
Ensembl chr11:65,102,031...65,225,311
G
Sema7a
semaphorin 7A (John Milton Hagen blood group)
acts_upstream_of_or_within
ISO
MGI:2683867|MGI:96610 (PMID:12879062)
RGD
PMID:12879062
NCBI chr 8:58,348,448...58,370,536
Ensembl chr 8:58,348,448...58,370,536
G
Slc9a6
solute carrier family 9 member A6
acts_upstream_of_or_within
ISO
(PMID:24035762)
RGD
PMID:24035762
NCBI chr X:134,430,677...134,486,747
Ensembl chr X:134,420,756...134,485,375
G
Spg11
SPG11 vesicle trafficking associated, spatacsin
acts_upstream_of_or_within
ISO
(PMID:24794856)
RGD
PMID:24794856
NCBI chr 3:109,007,658...109,072,904
Ensembl chr 3:109,008,135...109,072,911
G
Srf
serum response factor
acts_upstream_of
ISO
MGI:3522206 (PMID:24623780)
RGD
PMID:24623780
NCBI chr 9:14,426,453...14,435,734
Ensembl chr 9:14,426,472...14,435,733
G
Ssna1
SS nuclear autoantigen 1
involved_in
ISO IBA
(PMID:25390646) GO_REF:0000033 (PMID:30250060)
RGD GO_Central
PMID:25390646 PMID:30250060
GO_REF:0000033
NCBI chr 3:8,084,949...8,086,417
Ensembl chr 3:8,084,974...8,086,356
G
Tnr
tenascin R
acts_upstream_of
ISO
(PMID:16831557)
RGD
PMID:16831557
NCBI chr13:71,751,714...72,172,731
Ensembl chr13:72,091,585...72,167,641
G
Ulk1
unc-51 like autophagy activating kinase 1
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 (PMID:17389358)
GO_Central RGD
PMID:17389358
GO_REF:0000033
NCBI chr12:45,851,710...45,877,966
Ensembl chr12:45,851,710...45,877,966
G
Ulk2
unc-51 like autophagy activating kinase 2
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 (PMID:17389358)
GO_Central RGD
PMID:17389358
GO_REF:0000033
NCBI chr10:46,451,578...46,530,462
Ensembl chr10:46,454,030...46,530,407
G
Usp9x
ubiquitin specific peptidase 9, X-linked
involved_in acts_upstream_of_or_within
ISO
(PMID:24607389) MGI:5438072 (PMID:23861879)
RGD
PMID:23861879 PMID:24607389
NCBI chr X:9,588,825...9,726,993
Ensembl chr X:9,588,825...9,696,711
G
Vcl
vinculin
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:106658|MGI:1861437 (PMID:24623780)
Ensembl RGD
PMID:24623780
GO_REF:0000107
NCBI chr15:3,265,776...3,355,586
Ensembl chr15:3,265,815...3,355,606
G
Alcam
activated leukocyte cell adhesion molecule
involved_in
ISS
GO_REF:0000024
UniProt
GO_REF:0000024
NCBI chr11:48,336,123...48,536,296
Ensembl chr11:48,336,169...48,537,954
G
Nrp1
neuropilin 1
acts_upstream_of involved_in
ISO
(PMID:9753685) (PMID:22790009)
RGD
PMID:9753685 PMID:22790009
NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
G
Nrp2
neuropilin 2
involved_in
IEA ISO
GO_REF:0000107 (PMID:22790009)
Ensembl RGD
PMID:22790009
GO_REF:0000107
NCBI chr 9:64,122,815...64,238,007
Ensembl chr 9:64,123,132...64,237,958
G
Plxna3
plexin A3
acts_upstream_of
ISO
MGI:107558|MGI:1096347 (PMID:11683995)
RGD
PMID:11683995
NCBI chr X:152,115,699...152,131,608
Ensembl chr X:152,115,819...152,131,603
G
Ryk
receptor-like tyrosine kinase
acts_upstream_of
ISO
MGI:98958 (PMID:16723543)
RGD
PMID:16723543
NCBI chr 8:103,419,338...103,492,083
Ensembl chr 8:103,419,275...103,491,698
G
Sema3a
semaphorin 3A
acts_upstream_of involved_in
ISO
MGI:104518|MGI:107683|MGI:96721 (PMID:11683995), (PMID:18550718), (PMID:7748561), (PMID:9753685) (PMID:22790009)
RGD
PMID:7748561 PMID:9753685 PMID:11683995 PMID:18550718 PMID:22790009
NCBI chr 4:21,282,398...21,754,834
Ensembl chr 4:21,287,982...21,494,432
G
Sema3f
semaphorin 3F
acts_upstream_of involved_in
ISO
MGI:107683 (PMID:11683995), (PMID:9753685) (PMID:22790009)
RGD
PMID:9753685 PMID:11683995 PMID:22790009
NCBI chr 8:108,357,629...108,386,569
Ensembl chr 8:108,357,629...108,387,083
G
Slit1
slit guidance ligand 1
involved_in
ISO IEA
(PMID:16840550) GO_REF:0000107
RGD Ensembl
PMID:16840550
GO_REF:0000107
NCBI chr 1:240,409,559...240,558,127
Ensembl chr 1:240,409,561...240,558,127
G
Slit2
slit guidance ligand 2
involved_in
ISO IEA
(PMID:16840550) GO_REF:0000107
RGD Ensembl
PMID:16840550
GO_REF:0000107
NCBI chr14:62,616,337...62,955,934
Ensembl chr14:62,617,067...62,955,948
G
Slit3
slit guidance ligand 3
involved_in
ISO IEA
(PMID:16840550) GO_REF:0000107
RGD Ensembl
PMID:16840550
GO_REF:0000107
NCBI chr10:19,571,798...20,156,634
Ensembl chr10:19,571,684...20,156,634
G
Smo
smoothened, frizzled class receptor
IMP
RGD
PMID:19447091
RGD:2324988
NCBI chr 4:58,343,626...58,373,823
Ensembl chr 4:58,343,529...58,373,829
G
Wnt5a
Wnt family member 5A
involved_in acts_upstream_of
IEA ISO
GO_REF:0000107 MGI:101766 (PMID:16723543)
Ensembl RGD
PMID:16723543
GO_REF:0000107
NCBI chr16:3,697,032...3,718,230
Ensembl chr16:3,697,032...3,718,234
G
Lamb2
laminin subunit beta 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1856026 (PMID:9396756)
Ensembl RGD
PMID:9396756
GO_REF:0000107
NCBI chr 8:109,178,367...109,190,552
Ensembl chr 8:109,178,409...109,190,549
G
Ntrk3
neurotrophic receptor tyrosine kinase 3
acts_upstream_of
ISO
MGI:97380 (PMID:16142215)
RGD
PMID:16142215
NCBI chr 1:132,116,472...132,503,849
Ensembl chr 1:132,132,849...132,503,286
G
Tnr
tenascin R
involved_in acts_upstream_of
IEA ISO
GO_REF:0000107 MGI:2154583 (PMID:16870730)
Ensembl RGD
PMID:16870730
GO_REF:0000107
NCBI chr13:71,751,714...72,172,731
Ensembl chr13:72,091,585...72,167,641
G
Ablim1
actin-binding LIM protein 1
acts_upstream_of_or_within
ISO
(PMID:11163266)
RGD
PMID:11163266
NCBI chr 1:256,083,747...256,372,075
Ensembl chr 1:256,084,297...256,371,969
G
Alcam
activated leukocyte cell adhesion molecule
acts_upstream_of_or_within
ISO
MGI:3056579 (PMID:15345243)
RGD
PMID:15345243
NCBI chr11:48,336,123...48,536,296
Ensembl chr11:48,336,169...48,537,954
G
Ank3
ankyrin 3
acts_upstream_of_or_within
ISO
MGI:2179751 (PMID:15479642)
RGD
PMID:15479642
NCBI chr20:18,602,267...19,225,831
Ensembl chr20:18,602,786...19,086,300
G
Apbb1
amyloid beta precursor protein binding family B member 1
acts_upstream_of_or_within
ISO
MGI:108405 (PMID:16407979)
RGD
PMID:16407979
NCBI chr 1:159,896,889...159,920,505
Ensembl chr 1:159,896,880...159,920,627
G
Apbb2
amyloid beta precursor protein binding family B member 2
acts_upstream_of_or_within
ISO
MGI:107765 (PMID:16407979)
RGD
PMID:16407979
NCBI chr14:41,557,918...41,878,622
Ensembl chr14:41,557,972...41,877,495
G
Arhgap35
Rho GTPase activating protein 35
involved_in
ISS ISO
GO_REF:0000024 (PMID:11283609)
UniProt RGD
PMID:11283609
GO_REF:0000024
NCBI chr 1:77,202,436...77,319,298
Ensembl chr 1:77,202,436...77,319,298
G
Arhgef25
Rho guanine nucleotide exchange factor 25
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 7:63,005,938...63,013,325
Ensembl chr 7:63,005,940...63,013,719
G
Artn
artemin
acts_upstream_of_or_within
ISO
MGI:2183554 (PMID:12160745)
RGD
PMID:12160745
NCBI chr 5:131,458,596...131,470,193
Ensembl chr 5:131,464,756...131,468,025
G
Arx
aristaless related homeobox
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2679972 (PMID:15677725), (PMID:17460091)
Ensembl RGD
PMID:15677725 PMID:17460091
GO_REF:0000107
NCBI chr X:58,016,233...58,028,149
Ensembl chr X:58,016,233...58,028,142
G
Atoh1
atonal bHLH transcription factor 1
acts_upstream_of_or_within
ISO
MGI:2155984 (PMID:16145671)
RGD
PMID:16145671
NCBI chr 4:93,912,068...93,914,163
Ensembl chr 4:93,912,068...93,914,154
G
B3gnt2
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2
acts_upstream_of_or_within
ISO
MGI:3576265 (PMID:15728829), (PMID:23006775)
RGD
PMID:15728829 PMID:23006775
NCBI chr14:96,808,473...96,833,674
Ensembl chr14:96,806,664...96,835,273
G
B4gat1
beta-1,4-glucuronyltransferase 1
acts_upstream_of_or_within
ISO
MGI:5470461 (PMID:23217742)
RGD
PMID:23217742
NCBI chr 1:202,343,268...202,345,490
Ensembl chr 1:202,343,240...202,346,065
G
Bdnf
brain-derived neurotrophic factor
acts_upstream_of_or_within
ISO
MGI:1929986 (PMID:15014133)
RGD
PMID:15014133
NCBI chr 3:96,165,042...96,215,621
Ensembl chr 3:96,165,042...96,215,615
G
Bmp7
bone morphogenetic protein 7
acts_upstream_of_or_within
ISO
(PMID:12741987)
RGD
PMID:12741987
NCBI chr 3:161,639,915...161,716,938
Ensembl chr 3:161,516,462...161,716,788
G
Boc
BOC cell adhesion associated, oncogene regulated
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 MGI:3692939 (PMID:17086203)
GO_Central RGD
PMID:17086203
GO_REF:0000033
NCBI chr11:56,122,697...56,198,060
Ensembl chr11:56,122,750...56,198,059
G
Cdh4
cadherin 4
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:14586016)
Ensembl RGD
PMID:14586016
GO_REF:0000107
NCBI chr 3:166,525,092...167,003,380
Ensembl chr 3:166,525,099...167,003,371
G
Cdk5r1
cyclin-dependent kinase 5 regulatory subunit 1
involved_in
ISS ISO IBA
GO_REF:0000024 (PMID:10545161) GO_REF:0000033
UniProt RGD GO_Central
PMID:10545161
GO_REF:0000024 GO_REF:0000033
NCBI chr10:65,484,266...65,485,467
Ensembl chr10:65,483,941...65,488,456
G
Cdk5r2
cyclin-dependent kinase 5 regulatory subunit 2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 9:76,416,251...76,417,719
Ensembl chr 9:76,416,062...76,418,344
G
Chl1
cell adhesion molecule L1-like
acts_upstream_of_or_within
ISO
MGI:2429688 (PMID:12391163)
RGD
PMID:12391163
NCBI chr 4:136,291,504...136,505,830
Ensembl chr 4:136,291,463...136,503,265
G
Cntn1
contactin 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 7:123,263,146...123,560,896
Ensembl chr 7:123,372,792...123,558,541
G
Cntn2
contactin 2
acts_upstream_of_or_within involved_in
ISO IBA IEA
MGI:107558|MGI:2677610|MGI:96721 (PMID:18550718) GO_REF:0000033 GO_REF:0000107
RGD GO_Central Ensembl
PMID:18550718
GO_REF:0000033 GO_REF:0000107
NCBI chr13:43,942,868...43,975,973
Ensembl chr13:43,947,265...43,975,887
G
Cntn4
contactin 4
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 4:138,624,584...139,622,499
Ensembl chr 4:139,099,152...139,621,090
G
Cntn5
contactin 5
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 8:6,735,715...7,967,727
Ensembl chr 8:6,738,239...7,967,957
G
Crppa
CDP-L-ribitol pyrophosphorylase A
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:5470460 (PMID:23217742)
Ensembl RGD
PMID:23217742
GO_REF:0000107
NCBI chr 6:53,120,264...53,397,030
Ensembl chr 6:53,121,438...53,397,028
G
Csf1r
colony stimulating factor 1 receptor
involved_in
IEA ISO
GO_REF:0000107 (PMID:22542597)
Ensembl RGD
PMID:22542597
GO_REF:0000107
NCBI chr18:54,546,673...54,590,418
Ensembl chr18:54,546,659...54,590,415
G
Cxcl12
C-X-C motif chemokine ligand 12
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 4:150,388,326...150,401,173
Ensembl chr 4:150,388,325...150,401,168
G
Cyfip1
cytoplasmic FMR1 interacting protein 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:106,710,924...106,799,393
Ensembl chr 1:106,711,016...106,799,386
G
Cyfip2
cytoplasmic FMR1 interacting protein 2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr10:30,621,318...30,741,113
Ensembl chr10:30,621,318...30,741,113
G
Dag1
dystroglycan 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 8:108,890,926...108,955,611
Ensembl chr 8:108,890,929...108,952,325
G
Dcc
DCC netrin 1 receptor
involved_in
IMP IBA
GO_REF:0000033
GO_Central RGD
PMID:8861902
GO_REF:0000033, RGD:729062
NCBI chr18:64,868,987...65,972,783
Ensembl chr18:64,873,898...65,972,740
G
Dlx5
distal-less homeobox 5
acts_upstream_of_or_within
ISO
MGI:2180475 (PMID:17804636)
RGD
PMID:17804636
NCBI chr 4:34,999,139...35,003,504
Ensembl chr 4:34,999,139...35,003,407
G
Draxin
dorsal inhibitory axon guidance protein
involved_in
IBA ISO
GO_REF:0000033 (PMID:19150847)
GO_Central RGD
PMID:19150847
GO_REF:0000033
NCBI chr 5:158,530,149...158,563,457
Ensembl chr 5:158,530,342...158,564,483
G
Drgx
dorsal root ganglia homeobox
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2182636 (PMID:12917357)
Ensembl RGD
PMID:12917357
GO_REF:0000107
NCBI chr16:7,854,849...7,884,404
Ensembl chr16:7,854,849...7,900,600
G
Dscam
DS cell adhesion molecule
involved_in
ISS ISO IBA IEA
GO_REF:0000024 UniProtKB:O08747 (PMID:22685302) GO_REF:0000033 GO_REF:0000107
UniProt RGD GO_Central Ensembl
PMID:22685302
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107
NCBI chr11:35,921,924...36,507,100
Ensembl chr11:35,926,896...36,507,415
G
Dscaml1
DS cell adhesion molecule-like 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 8:45,740,298...46,057,322
Ensembl chr 8:45,740,298...46,057,320
G
Dvl1
dishevelled segment polarity protein 1
acts_upstream_of_or_within
ISO
(PMID:18716223)
RGD
PMID:18716223
NCBI chr 5:166,456,989...166,468,733
Ensembl chr 5:166,456,686...166,468,664
G
Ece1
endothelin converting enzyme 1
involved_in
ISO
MGI:1857637|MGI:2158947|MGI:2687362 (PMID:30735130)
RGD
PMID:30735130
NCBI chr 5:150,077,679...150,179,375
Ensembl chr 5:150,077,644...150,179,371
G
Edn1
endothelin 1
involved_in
ISO
MGI:1857637|MGI:2158947|MGI:2687362 (PMID:30735130)
RGD
PMID:30735130
NCBI chr17:22,454,924...22,460,812
Ensembl chr17:22,454,420...22,460,885
G
Edn3
endothelin 3
involved_in
ISO
MGI:1857160 (PMID:18401410)
RGD
PMID:18401410
NCBI chr 3:163,562,307...163,586,636
Ensembl chr 3:163,562,520...163,585,093
G
Ednra
endothelin receptor type A
involved_in
ISO
MGI:1857473|MGI:1857637|MGI:2158947|MGI:2687362 (PMID:18401410), (PMID:30735130)
RGD
PMID:18401410 PMID:30735130
NCBI chr19:30,233,540...30,303,727
Ensembl chr19:30,233,571...30,297,049
G
Efna1
ephrin A1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 2:174,681,676...174,689,061
Ensembl chr 2:174,681,682...174,690,866
G
Efna2
ephrin A2
involved_in
IEP IBA
GO_REF:0000033
GO_Central RGD
PMID:17328773
GO_REF:0000033, RGD:2301727
NCBI chr 7:9,515,635...9,528,071
Ensembl chr 7:9,516,429...9,527,061
G
Efna3
ephrin A3
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 2:174,729,192...174,738,111
Ensembl chr 2:174,729,764...174,738,736
G
Efna4
ephrin A4
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 2:174,748,729...174,752,979
Ensembl chr 2:174,748,724...174,752,979
G
Efna5
ephrin A5
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 MGI:2429768 (PMID:11222144), (PMID:9614241)
GO_Central RGD
PMID:9614241 PMID:11222144
GO_REF:0000033
NCBI chr 9:102,316,753...102,595,480
Ensembl chr 9:102,320,295...102,597,413
G
Efnb1
ephrin B1
acts_upstream_of_or_within involved_in
TAS ISO IBA IEA
(PMID:11731465) GO_REF:0000033 GO_REF:0000107
RGD GO_Central Ensembl
PMID:11731465 PMID:12139920
GO_REF:0000033 GO_REF:0000107, RGD:727396
NCBI chr X:64,257,351...64,270,158
Ensembl chr X:64,257,351...64,270,157
G
Efnb2
ephrin B2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr16:80,783,389...80,827,420
Ensembl chr16:80,783,417...80,824,391
G
Efnb3
ephrin B3
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 MGI:2388046 (PMID:11731465), (PMID:12649481)
GO_Central RGD
PMID:11731465 PMID:12649481
GO_REF:0000033
NCBI chr10:54,274,506...54,281,951
Ensembl chr10:54,274,506...54,280,471
G
Emb
embigin
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 2:49,070,509...49,125,042
Ensembl chr 2:49,069,087...49,125,050
G
Enah
ENAH, actin regulator
acts_upstream_of_or_within involved_in
ISO IBA
MGI:109268|MGI:3056050 (PMID:10069337), (PMID:15371503) GO_REF:0000033
RGD GO_Central
PMID:10069337 PMID:15371503
GO_REF:0000033
NCBI chr13:93,617,747...93,738,119
Ensembl chr13:93,626,944...93,740,955
G
Epha10
EPH receptor A10
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 5:137,139,588...137,175,637
Ensembl chr 5:137,140,735...137,174,157
G
Epha3
Eph receptor A3
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr11:1,138,485...1,474,102
Ensembl chr11:1,140,985...1,473,900
G
Epha4
Eph receptor A4
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 MGI:2654411|MGI:2679336 (PMID:12649481), (PMID:23144223)
GO_Central RGD
PMID:12649481 PMID:23144223
GO_REF:0000033
NCBI chr 9:78,815,460...78,958,139
Ensembl chr 9:78,815,460...78,958,139
G
Epha5
EPH receptor A5
involved_in
ISS ISO IBA
GO_REF:0000024 (PMID:12124402) GO_REF:0000033
UniProt RGD GO_Central
PMID:12124402
GO_REF:0000024 GO_REF:0000033
NCBI chr14:23,653,393...24,020,129
Ensembl chr14:23,653,393...24,017,317
G
Epha6
Eph receptor A6
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr11:39,757,501...40,708,901
Ensembl chr11:39,757,181...40,698,311
G
Epha7
Eph receptor A7
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 5:42,975,353...43,128,703
Ensembl chr 5:42,975,405...43,127,112
G
Epha8
Eph receptor A8
involved_in
IEA ISO ISS
GO_REF:0000107 (PMID:9214628) GO_REF:0000024
Ensembl RGD UniProt
PMID:9214628
GO_REF:0000024 GO_REF:0000107
NCBI chr 5:149,166,107...149,193,515
Ensembl chr 5:149,166,697...149,193,399
G
Ephb1
Eph receptor B1
involved_in acts_upstream_of_or_within
ISS ISO IBA
GO_REF:0000024 MGI:2677305|MGI:2677312 (PMID:11532925), (PMID:12971893), (PMID:16701205), (PMID:24997765) GO_REF:0000033
UniProt RGD GO_Central
PMID:11532925 PMID:12971893 PMID:16701205 PMID:24997765
GO_REF:0000024 GO_REF:0000033
NCBI chr 8:102,507,549...102,944,839
Ensembl chr 8:102,507,549...102,944,839
G
Ephb2
Eph receptor B2
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 (PMID:10839360), (PMID:8947026) (PMID:11532925)
GO_Central RGD
PMID:8947026 PMID:10839360 PMID:11532925
GO_REF:0000033
NCBI chr 5:148,889,574...149,077,027
Ensembl chr 5:148,897,246...149,077,059
G
Ephb3
Eph receptor B3
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 (PMID:10839360), (PMID:8947026) (PMID:11532925)
GO_Central RGD
PMID:8947026 PMID:10839360 PMID:11532925
GO_REF:0000033
NCBI chr11:79,840,668...79,859,345
Ensembl chr11:79,840,668...79,859,370
G
Ephb6
Eph receptor B6
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 4:70,491,973...70,507,230
Ensembl chr 4:70,491,973...70,507,230
G
Etv1
ETS variant transcription factor 1
acts_upstream_of_or_within
ISO
MGI:2384493|MGI:2384496 (PMID:10850491)
RGD
PMID:10850491
NCBI chr 6:55,590,149...55,681,784
Ensembl chr 6:55,590,234...55,681,775
G
Evl
Enah/Vasp-like
involved_in
NAS IBA
PMID:9268706 GO_REF:0000033
GO_Central
PMID:9268706
GO_REF:0000033, RGD:728214
NCBI chr 6:127,473,119...127,594,342
Ensembl chr 6:127,474,543...127,594,344
G
Ext1
exostosin glycosyltransferase 1
acts_upstream_of_or_within acts_upstream_of_or_within_positive_effect
ISO
MGI:1315205|MGI:2176173|MGI:2682061 (PMID:14605369), (PMID:21743013)
RGD
PMID:14605369 PMID:21743013
NCBI chr 7:84,375,769...84,654,625
Ensembl chr 7:84,375,784...84,655,357
G
Fezf1
Fez family zinc finger 1
acts_upstream_of_or_within
ISO
(PMID:16540508)
RGD
PMID:16540508
NCBI chr 4:51,762,751...51,766,078
Ensembl chr 4:51,762,751...51,766,078
G
Flrt2
fibronectin leucine rich transmembrane protein 2
acts_upstream_of_or_within
ISO
MGI:2389364 (PMID:21673655)
RGD
PMID:21673655
NCBI chr 6:114,777,547...114,872,688
Ensembl chr 6:114,777,599...114,872,785
G
Flrt3
fibronectin leucine rich transmembrane protein 3
acts_upstream_of_or_within involved_in
IGI ISO
PMID:21673655 (PMID:24560577)
RGD
PMID:24560577 PMID:21673655
RGD:8554719
NCBI chr 3:127,994,491...128,008,137
Ensembl chr 3:127,994,226...128,007,841
G
Foxd1
forkhead box D1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2180362 (PMID:15509772)
Ensembl RGD
PMID:15509772
GO_REF:0000107
NCBI chr 2:29,702,558...29,704,978
Ensembl chr 2:29,702,558...29,704,978
G
Gap43
growth associated protein 43
acts_upstream_of_or_within
ISO
MGI:2448337 (PMID:10662636)
RGD
PMID:10662636
NCBI chr11:58,376,371...58,470,047
Ensembl chr11:58,376,371...58,470,045
G
Gas1
growth arrest-specific 1
acts_upstream_of_or_within
ISO
MGI:3711070 (PMID:17504941)
RGD
PMID:17504941
NCBI chr17:4,482,168...4,485,153
G
Gata3
GATA binding protein 3
acts_upstream_of_or_within
ISO
MGI:2181200 (PMID:11135239)
RGD
PMID:11135239
NCBI chr17:68,643,760...68,666,000
Ensembl chr17:68,643,873...68,665,391
G
Gbx2
gastrulation brain homeobox 2
acts_upstream_of_or_within
ISO
MGI:1857634 (PMID:11967891)
RGD
PMID:11967891
NCBI chr 9:90,509,633...90,512,212
Ensembl chr 9:90,509,633...90,512,212
G
Gdf7
growth differentiation factor 7
acts_upstream_of_or_within
ISO
(PMID:12639970)
RGD
PMID:12639970
NCBI chr 6:31,171,495...31,182,484
Ensembl chr 6:31,178,119...31,182,447
G
Gfra3
GDNF family receptor alpha 3
acts_upstream_of_or_within
ISO
MGI:2136781|MGI:2183558 (PMID:10482239), (PMID:12160745)
RGD
PMID:10482239 PMID:12160745
NCBI chr18:26,297,828...26,326,105
Ensembl chr18:26,297,829...26,326,105
G
Gli2
GLI family zinc finger 2
acts_upstream_of_or_within
ISO
MGI:1857509 (PMID:10409510)
RGD
PMID:10409510
NCBI chr13:29,946,882...30,163,589
Ensembl chr13:29,946,809...30,163,574
G
Gli3
GLI family zinc finger 3
acts_upstream_of_or_within
ISO
MGI:1856276|MGI:1856282 (PMID:15065125), (PMID:20943929)
RGD
PMID:15065125 PMID:20943929
NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712
G
Hmcn1
hemicentin 1
involved_in
IEA
GO_REF:0000108
GOC
GO_REF:0000108
NCBI chr13:62,615,461...63,084,524
Ensembl chr13:62,615,461...63,084,524
G
Hspg2
heparan sulfate proteoglycan 2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 5:149,677,437...149,778,594
Ensembl chr 5:149,677,476...149,778,594
G
Kalrn
kalirin, RhoGEF kinase
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr11:66,198,155...66,803,166
Ensembl chr11:66,198,173...66,797,610
G
Kif5a
kinesin family member 5A
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 7:63,051,894...63,089,024
Ensembl chr 7:63,049,424...63,092,858
G
Kif5b
kinesin family member 5B
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr17:51,489,904...51,527,508
Ensembl chr17:51,489,944...51,527,508
G
Klf7
KLF transcription factor 7
acts_upstream_of_or_within
ISO
MGI:3581890 (PMID:15964824)
RGD
PMID:15964824
NCBI chr 9:65,433,683...65,526,372
Ensembl chr 9:65,437,167...65,526,261
G
L1cam
L1 cell adhesion molecule
involved_in acts_upstream_of_or_within
ISO IEA ISS
(PMID:24155914) MGI:104518|MGI:107558|MGI:1857443 (PMID:12533613), (PMID:18550718), (PMID:18650339) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:12533613 PMID:18550718 PMID:18650339 PMID:24155914
GO_REF:0000024 GO_REF:0000107
NCBI chr X:151,597,270...151,623,776
Ensembl chr X:151,597,277...151,623,857
G
Lama1
laminin subunit alpha 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 9:107,692,770...107,816,847
Ensembl chr 9:107,692,770...107,817,478
G
Lama2
laminin subunit alpha 2
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 MGI:109613 (PMID:19295126)
GO_Central RGD
PMID:19295126
GO_REF:0000033
NCBI chr 1:17,672,675...18,320,641
Ensembl chr 1:17,672,536...18,320,530
G
Lama5
laminin subunit alpha 5
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 3:167,270,296...167,318,370
Ensembl chr 3:167,270,296...167,318,451
G
Lamb1
laminin subunit beta 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 6:47,835,492...47,902,585
Ensembl chr 6:47,835,525...47,902,585
G
Lamb2
laminin subunit beta 2
involved_in acts_upstream_of_or_within
IEA ISO IBA
GO_REF:0000107 MGI:109613 (PMID:19295126) GO_REF:0000033
Ensembl RGD GO_Central
PMID:19295126
GO_REF:0000033 GO_REF:0000107
NCBI chr 8:109,178,367...109,190,552
Ensembl chr 8:109,178,409...109,190,549
G
Lamb3
laminin subunit beta 3
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr13:104,833,810...104,875,405
Ensembl chr13:104,833,873...104,875,405
G
Lamc1
laminin subunit gamma 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr13:65,374,372...65,501,492
Ensembl chr13:65,374,372...65,501,492
G
Lamc2
laminin subunit gamma 2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr13:65,284,664...65,344,164
Ensembl chr13:65,284,664...65,344,200
G
Lamc3
laminin subunit gamma 3
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 3:15,165,220...15,226,697
Ensembl chr 3:15,165,220...15,226,697
G
Lgi1
leucine-rich, glioma inactivated 1
involved_in
ISO
(PMID:20463223)
RGD
PMID:20463223
NCBI chr 1:236,043,269...236,084,617
Ensembl chr 1:236,042,954...236,084,616
G
Lgr4
leucine-rich repeat-containing G protein-coupled receptor 4
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 3:96,447,385...96,550,006
Ensembl chr 3:96,447,858...96,548,899
G
Lgr6
leucine-rich repeat-containing G protein-coupled receptor 6
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr13:46,424,382...46,544,074
Ensembl chr13:46,424,383...46,543,945
G
Lhx2
LIM homeobox 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:22457488) MGI:1890208 (PMID:17493606)
Ensembl RGD
PMID:17493606 PMID:22457488
GO_REF:0000107
NCBI chr 3:22,113,619...22,143,909
Ensembl chr 3:22,126,007...22,143,908
G
Lmx1a
LIM homeobox transcription factor 1 alpha
acts_upstream_of_or_within
ISO
MGI:1888413 (PMID:15183721)
RGD
PMID:15183721
NCBI chr13:79,834,614...79,978,253
Ensembl chr13:79,835,019...79,978,253
G
Lrtm2
leucine-rich repeats and transmembrane domains 2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 4:152,485,863...152,508,248
Ensembl chr 4:152,485,866...152,500,377
G
Mapk8ip3
mitogen-activated protein kinase 8 interacting protein 3
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3527900 (PMID:15572149)
Ensembl RGD
PMID:15572149
GO_REF:0000107
NCBI chr10:13,918,417...13,958,335
Ensembl chr10:13,918,400...13,958,273
G
Matn2
matrilin 2
acts_upstream_of_or_within
ISO
MGI:99912|MGI:99916 (PMID:19295126)
RGD
PMID:19295126
NCBI chr 7:65,494,996...65,644,613
Ensembl chr 7:65,494,834...65,645,113
G
Mef2c
myocyte enhancer factor 2C
involved_in
ISO
MGI:1857637|MGI:2158947|MGI:2687362 (PMID:30735130)
RGD
PMID:30735130
NCBI chr 2:13,973,299...14,136,065
Ensembl chr 2:13,993,438...14,132,880
G
Megf8
multiple EGF-like-domains 8
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:80,902,236...80,951,614
Ensembl chr 1:80,902,574...80,951,613
G
Megf9
multiple EGF-like-domains 9
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 5:83,993,565...84,105,622
Ensembl chr 5:83,993,565...84,105,622
G
Mycbp2
MYC binding protein 2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr15:79,937,354...80,175,432
Ensembl chr15:79,937,354...80,175,498
G
Myh10
myosin heavy chain 10
acts_upstream_of_or_within
ISO
MGI:2386445 (PMID:15880105)
RGD
PMID:15880105
NCBI chr10:53,393,901...53,525,174
Ensembl chr10:53,394,389...53,525,165
G
Myot
myotilin
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr18:36,705,244...36,724,849
Ensembl chr18:36,705,314...36,724,841
G
Nectin1
nectin cell adhesion molecule 1
IMP
RGD
PMID:15328010
RGD:1599806
NCBI chr 8:44,101,776...44,164,863
Ensembl chr 8:44,101,776...44,189,787
G
Neo1
neogenin 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 8:59,273,860...59,426,486
Ensembl chr 8:59,275,569...59,430,348
G
Neurog2
neurogenin 2
acts_upstream_of_or_within
ISO
MGI:2159010 (PMID:12895419), (PMID:15328020)
RGD
PMID:12895419 PMID:15328020
NCBI chr 2:216,092,709...216,095,276
Ensembl chr 2:216,093,363...216,094,154
G
Nexn
nexilin (F actin binding protein)
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 2:241,186,783...241,218,315
Ensembl chr 2:241,186,790...241,218,342
G
Nfasc
neurofascin
acts_upstream_of_or_within involved_in
ISO IBA
(PMID:15479642) GO_REF:0000033
RGD GO_Central
PMID:15479642
GO_REF:0000033
NCBI chr13:43,997,223...44,183,863
Ensembl chr13:43,997,224...44,183,880
G
Ngfr
nerve growth factor receptor
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1857226 (PMID:11978834)
Ensembl RGD
PMID:11978834
GO_REF:0000107
NCBI chr10:80,515,287...80,533,518
Ensembl chr10:80,515,299...80,533,518
G
Nkx2-1
NK2 homeobox 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1857494 (PMID:11830575)
Ensembl RGD
PMID:11830575
GO_REF:0000107
NCBI chr 6:73,996,601...74,001,483
Ensembl chr 6:73,996,601...73,999,791
G
Nog
noggin
acts_upstream_of_or_within
ISO
MGI:1862000 (PMID:12435358)
RGD
PMID:12435358
NCBI chr10:74,128,712...74,130,339
Ensembl chr10:74,128,712...74,130,339
G
Notch3
notch receptor 3
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 7:11,132,984...11,184,025
Ensembl chr 7:11,133,706...11,184,025
G
Nr4a3
nuclear receptor subfamily 4, group A, member 3
acts_upstream_of_or_within
ISO
MGI:3037444 (PMID:15456880)
RGD
PMID:15456880
NCBI chr 5:62,361,588...62,401,489
Ensembl chr 5:62,361,822...62,402,733
G
Nrcam
neuronal cell adhesion molecule
involved_in
IBA ISO
GO_REF:0000033 (PMID:12182881)
GO_Central RGD
PMID:12182881
GO_REF:0000033
NCBI chr 6:61,402,813...61,698,536
Ensembl chr 6:61,329,863...61,702,992
G
Nrp1
neuropilin 1
involved_in acts_upstream_of_or_within
IEA ISO IBA
GO_REF:0000002 MGI:1857853|MGI:3512099 (PMID:12852851), (PMID:15604101), (PMID:15814794) GO_REF:0000033
InterPro RGD GO_Central
PMID:12852851 PMID:15604101 PMID:15814794
GO_REF:0000002 GO_REF:0000033
NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
G
Nrp2
neuropilin 2
acts_upstream_of_or_within involved_in
IEP ISO IBA IEA
(PMID:15814794) GO_REF:0000033 GO_REF:0000002
RGD GO_Central InterPro
PMID:15814794 PMID:9288754
GO_REF:0000002 GO_REF:0000033, RGD:633436
NCBI chr 9:64,122,815...64,238,007
Ensembl chr 9:64,123,132...64,237,958
G
Ntf3
neurotrophin 3
acts_upstream_of_or_within
ISO
MGI:1933844 (PMID:15550985), (PMID:8861722)
RGD
PMID:8861722 PMID:15550985
NCBI chr 4:158,914,984...158,984,453
Ensembl chr 4:158,914,957...158,984,596
G
Ntn1
netrin 1
acts_upstream_of_or_within
NAS ISO
MGI:1927548 (PMID:10908620), (PMID:12051827), (PMID:12679031), (PMID:16481423), (PMID:17086203), (PMID:17898206)
RGD
PMID:10908620 PMID:12051827 PMID:12679031 PMID:16481423 PMID:17086203 PMID:17898206 PMID:11356879 More...
RGD:633501
NCBI chr10:52,899,933...53,098,591
Ensembl chr10:52,899,934...53,085,326
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Ntn3
netrin 3
NAS
RGD
PMID:11356879
RGD:633501
NCBI chr10:13,236,905...13,240,001
Ensembl chr10:13,236,905...13,240,001
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Ntn4
netrin 4
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 7:28,186,611...28,300,390
Ensembl chr 7:28,186,611...28,300,390
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Ntrk1
neurotrophic receptor tyrosine kinase 1
IMP
RGD
PMID:18344912
RGD:5684394
NCBI chr 2:173,236,961...173,253,806
Ensembl chr 2:173,236,963...173,253,770
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Or10a4
olfactory receptor family 10 subfamily A member 4
acts_upstream_of_or_within
ISO
MGI:1923510 (PMID:21646512)
RGD
PMID:21646512
NCBI chr 1:160,957,099...160,958,046
Ensembl chr 1:160,953,530...160,958,974
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Or8a1b
olfactory receptor family 8 subfamily A member 1B
acts_upstream_of_or_within
ISO
MGI:1923510 (PMID:21646512)
RGD
PMID:21646512
NCBI chr 8:37,434,903...37,435,832
Ensembl chr 8:37,434,551...37,439,746
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Otx2
orthodenticle homeobox 2
involved_in
ISO IEA
(PMID:16267555) GO_REF:0000107
RGD Ensembl
PMID:16267555
GO_REF:0000107
NCBI chr15:21,942,233...21,953,034
Ensembl chr15:21,943,191...21,953,416
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Pax6
paired box 6
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1856158 (PMID:11967891), (PMID:14586016)
Ensembl RGD
PMID:11967891 PMID:14586016
GO_REF:0000107
NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
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Pgrmc1
progesterone receptor membrane component 1
IEP
RGD
PMID:10656251
RGD:727289
NCBI chr X:115,832,865...115,841,060
Ensembl chr X:115,832,884...115,888,682
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Pla2g10
phospholipase A2, group X
acts_upstream_of_or_within
ISO
(PMID:15927955)
RGD
PMID:15927955
NCBI chr10:1,597,761...1,610,822
Ensembl chr10:1,597,761...1,609,000
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Plxna3
plexin A3
acts_upstream_of_or_within
ISO
MGI:2386961 (PMID:11683995)
RGD
PMID:11683995
NCBI chr X:152,115,699...152,131,608
Ensembl chr X:152,115,819...152,131,603
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Plxna4
plexin A4
acts_upstream_of_or_within involved_in
ISO IBA
MGI:3578655 (PMID:15814794) GO_REF:0000033
RGD GO_Central
PMID:15814794
GO_REF:0000033
NCBI chr 4:60,720,246...61,162,206
Ensembl chr 4:60,720,255...61,162,206
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Pou4f2
POU class 4 homeobox 2
acts_upstream_of_or_within
ISO
MGI:3582493 (PMID:11163266)
RGD
PMID:11163266
NCBI chr19:29,486,686...29,490,327
Ensembl chr19:29,486,686...29,490,327
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Ptprj
protein tyrosine phosphatase, receptor type, J
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 3:76,405,917...76,561,842
Ensembl chr 3:76,405,927...76,562,260
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Ptpro
protein tyrosine phosphatase, receptor type, O
involved_in
ISS ISO IBA
GO_REF:0000024 (PMID:19800005) GO_REF:0000033
UniProt RGD GO_Central
PMID:19800005
GO_REF:0000024 GO_REF:0000033
NCBI chr 4:170,164,071...170,374,790
Ensembl chr 4:170,164,431...170,374,771
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Rac1
Rac family small GTPase 1
acts_upstream_of_or_within
ISO
MGI:1932522|MGI:2663662 (PMID:17409253)
RGD
PMID:17409253
NCBI chr12:11,037,028...11,057,251
Ensembl chr12:11,036,698...11,057,251
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Reln
reelin
involved_in acts_upstream_of_or_within
IEA ISO ISS
GO_REF:0000107 MGI:1856398 (PMID:16324103) GO_REF:0000024
Ensembl RGD UniProt
PMID:16324103
GO_REF:0000024 GO_REF:0000107
NCBI chr 4:12,736,177...13,162,956
Ensembl chr 4:12,736,130...13,162,211
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Robo1
roundabout guidance receptor 1
acts_upstream_of_or_within
IDA ISO
MGI:3043142 (PMID:15084255), (PMID:15091338)
RGD
PMID:15084255 PMID:15091338 PMID:9458045
RGD:61733
NCBI chr11:10,580,863...11,621,675
Ensembl chr11:10,580,908...11,620,203
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Robo2
roundabout guidance receptor 2
acts_upstream_of_or_within
IDA ISO
MGI:3043127 (PMID:15091338)
RGD
PMID:15091338 PMID:10102268
RGD:68763
NCBI chr11:12,528,949...14,096,726
Ensembl chr11:12,528,951...13,041,536
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Robo3
roundabout guidance receptor 3
acts_upstream_of_or_within involved_in
ISO
MGI:1274781|MGI:3043150 (PMID:15084255), (PMID:15233918) (PMID:25433640), (PMID:26586761), (PMID:30843071)
RGD
PMID:15084255 PMID:15233918 PMID:25433640 PMID:26586761 PMID:30843071
NCBI chr 8:37,133,542...37,151,674
Ensembl chr 8:37,133,916...37,151,315
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Rtn4r
reticulon 4 receptor
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr11:82,844,309...82,869,251
Ensembl chr11:82,844,309...82,869,466
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Rtn4rl1
reticulon 4 receptor-like 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr10:60,043,246...60,116,977
Ensembl chr10:60,043,002...60,116,978
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Runx3
RUNX family transcription factor 3
acts_upstream_of_or_within
ISO
MGI:2179229 (PMID:12352981)
RGD
PMID:12352981
NCBI chr 5:147,360,587...147,419,161
Ensembl chr 5:147,360,994...147,419,156
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Ryk
receptor-like tyrosine kinase
involved_in
ISS ISO
GO_REF:0000024 (PMID:16116452), (PMID:16723543)
UniProt RGD
PMID:16116452 PMID:16723543
GO_REF:0000024
NCBI chr 8:103,419,338...103,492,083
Ensembl chr 8:103,419,275...103,491,698
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Scn1b
sodium voltage-gated channel beta subunit 1
acts_upstream_of_or_within
ISO
MGI:3043422 (PMID:18354028)
RGD
PMID:18354028
NCBI chr 1:86,353,917...86,363,820
Ensembl chr 1:86,353,917...86,363,739
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Sema3a
semaphorin 3A
acts_upstream_of_or_within involved_in
IGI IEA ISO
PMID:21068336 GO_REF:0000117 MGI:2158944|MGI:2449920 (PMID:12435358), (PMID:15604101), (PMID:15814794), (PMID:15869472), (PMID:17417650), (PMID:17428830)
UniProt RGD
PMID:12435358 PMID:15604101 PMID:15814794 PMID:15869472 PMID:17417650 PMID:17428830 PMID:21068336 More...
GO_REF:0000117, RGD:8554551
NCBI chr 4:21,282,398...21,754,834
Ensembl chr 4:21,287,982...21,494,432
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Sema3b
semaphorin 3B
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 8:108,271,663...108,280,326
Ensembl chr 8:108,271,666...108,282,919
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Sema3c
semaphorin 3C
involved_in
IBA ISO
GO_REF:0000033 (PMID:17021275)
GO_Central RGD
PMID:17021275
GO_REF:0000033
NCBI chr 4:17,583,212...17,747,234
Ensembl chr 4:17,583,212...17,746,534
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Sema3d
semaphorin 3D
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 4:22,316,769...22,505,930
Ensembl chr 4:22,316,779...22,505,930
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Sema3e
semaphorin 3E
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 4:20,297,534...20,555,287
Ensembl chr 4:20,299,718...20,555,229
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Sema3f
semaphorin 3F
acts_upstream_of_or_within involved_in
ISO IBA
(PMID:15814794) (PMID:12435358) GO_REF:0000033
RGD GO_Central
PMID:12435358 PMID:15814794
GO_REF:0000033
NCBI chr 8:108,357,629...108,386,569
Ensembl chr 8:108,357,629...108,387,083
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Sema3g
semaphorin 3G
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr16:6,413,589...6,425,221
Ensembl chr16:6,413,589...6,425,221
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Sema4a
semaphorin 4A
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 2:173,896,432...173,917,903
Ensembl chr 2:173,896,439...173,914,442
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Sema4b
semaphorin 4B
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:134,136,646...134,177,777
Ensembl chr 1:134,149,536...134,177,775
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Sema4c
semaphorin 4C
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 9:38,791,668...38,802,171
Ensembl chr 9:38,791,670...38,802,128
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Sema4d
semaphorin 4D
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr17:13,430,324...13,537,146
Ensembl chr17:13,430,379...13,537,138
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Sema4f
ssemaphorin 4F
involved_in
IDA IBA
GO_REF:0000033
GO_Central RGD
PMID:10051670
GO_REF:0000033, RGD:69991
NCBI chr 4:115,411,411...115,437,721
Ensembl chr 4:115,411,417...115,437,721
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Sema4g
semaphorin 4G
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:243,849,979...243,865,343
Ensembl chr 1:243,853,854...243,865,341
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Sema5a
semaphorin 5A
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 (PMID:12506007)
GO_Central RGD
PMID:12506007
GO_REF:0000033
NCBI chr 2:83,309,843...83,741,084
Ensembl chr 2:83,309,843...83,741,084
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Sema5b
semaphorin 5B
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr11:65,102,532...65,225,456
Ensembl chr11:65,102,031...65,225,311
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Sema6a
semaphorin 6A
involved_in
IBA ISO
GO_REF:0000033 (PMID:16205717)
GO_Central RGD
PMID:16205717
GO_REF:0000033
NCBI chr18:40,050,623...40,171,954
Ensembl chr18:40,050,624...40,171,954
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Sema6b
semaphorin 6B
involved_in
ISS ISO IBA IEA
GO_REF:0000024 (PMID:20484647) GO_REF:0000033 GO_REF:0000107
UniProt RGD GO_Central Ensembl
PMID:20484647
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107
NCBI chr 9:950,939...967,905
Ensembl chr 9:950,939...961,521
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Sema6c
semaphorin 6C
involved_in
IDA IBA
GO_REF:0000033
GO_Central RGD
PMID:10049528
GO_REF:0000033, RGD:69992
NCBI chr 2:182,733,635...182,750,066
Ensembl chr 2:182,737,474...182,746,856
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Sema6d
semaphorin 6D
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 3:111,883,415...111,941,100
Ensembl chr 3:111,883,872...111,941,094
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Sema7a
semaphorin 7A (John Milton Hagen blood group)
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 8:58,348,448...58,370,536
Ensembl chr 8:58,348,448...58,370,536
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Shh
sonic hedgehog signaling molecule
involved_in acts_upstream_of_or_within
IEA ISO ISS
GO_REF:0000107 MGI:1934268 (PMID:12679031), (PMID:12756179), (PMID:15065125) GO_REF:0000024
Ensembl RGD UniProt
PMID:12679031 PMID:12756179 PMID:15065125
GO_REF:0000024 GO_REF:0000107
NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
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Slit1
slit guidance ligand 1
involved_in acts_upstream_of_or_within
ISO IBA IEA
(PMID:11748139) MGI:105088|MGI:1315202|MGI:1315205 (PMID:11804571), (PMID:12051827), (PMID:12954717), (PMID:15091338) GO_REF:0000033 GO_REF:0000117
RGD GO_Central UniProt
PMID:11748139 PMID:11804571 PMID:12051827 PMID:12954717 PMID:15091338
GO_REF:0000033 GO_REF:0000117
NCBI chr 1:240,409,559...240,558,127
Ensembl chr 1:240,409,561...240,558,127
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Slit2
slit guidance ligand 2
involved_in acts_upstream_of_or_within
ISO IEA
(PMID:11748139) MGI:1315202|MGI:1315203|MGI:2179460|MGI:894663 (PMID:11804571), (PMID:12879062), (PMID:12954717), (PMID:14605369), (PMID:15091338) GO_REF:0000117
RGD UniProt
PMID:11748139 PMID:11804571 PMID:12879062 PMID:12954717 PMID:14605369 PMID:15091338 More...
GO_REF:0000117
NCBI chr14:62,616,337...62,955,934
Ensembl chr14:62,617,067...62,955,948
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Slit3
slit guidance ligand 3
involved_in acts_upstream_of_or_within
ISO IBA
(PMID:11748139) (PMID:12954717) GO_REF:0000033
RGD GO_Central
PMID:11748139 PMID:12954717
GO_REF:0000033
NCBI chr10:19,571,798...20,156,634
Ensembl chr10:19,571,684...20,156,634
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Smad4
SMAD family member 4
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2386393|MGI:4459942 (PMID:21300867)
Ensembl RGD
PMID:21300867
GO_REF:0000107
NCBI chr18:67,243,742...67,274,438
Ensembl chr18:67,243,742...67,274,438
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Tgfb2
transforming growth factor, beta 2
acts_upstream_of_or_within
ISO
MGI:1888389 (PMID:15528466)
RGD
PMID:15528466
NCBI chr13:98,160,075...98,261,771
Ensembl chr13:98,160,087...98,261,405
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Trio
trio Rho guanine nucleotide exchange factor
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 2:78,505,069...78,801,384
Ensembl chr 2:78,505,070...78,803,135
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Ttc8
tetratricopeptide repeat domain 8
acts_upstream_of_or_within
ISO
MGI:109148|MGI:1931271 (PMID:21646512)
RGD
PMID:21646512
NCBI chr 6:118,198,186...118,252,422
Ensembl chr 6:118,198,201...118,252,418
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Tubb3
tubulin, beta 3 class III
involved_in
ISO IBA ISS
(PMID:20074521) (PMID:20074521), (PMID:28483977) GO_REF:0000033 GO_REF:0000024
RGD GO_Central UniProt
PMID:20074521 PMID:28483977
GO_REF:0000024 GO_REF:0000033
NCBI chr19:51,457,187...51,466,243
Ensembl chr19:51,457,184...51,466,243
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Ulk1
unc-51 like autophagy activating kinase 1
acts_upstream_of_or_within
ISO
(PMID:29099309)
RGD
PMID:29099309
NCBI chr12:45,851,710...45,877,966
Ensembl chr12:45,851,710...45,877,966
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Ulk2
unc-51 like autophagy activating kinase 2
acts_upstream_of_or_within
ISO
(PMID:29099309)
RGD
PMID:29099309
NCBI chr10:46,451,578...46,530,462
Ensembl chr10:46,454,030...46,530,407
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Unc5a
unc-5 netrin receptor A
involved_in
IDA IEA
GO_REF:0000117
UniProt RGD
PMID:9126742
GO_REF:0000117, RGD:634450
NCBI chr17:9,614,841...9,670,558
Ensembl chr17:9,614,838...9,670,526
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Unc5b
unc-5 netrin receptor B
involved_in acts_upstream_of_or_within
IDA IEA IGI
GO_REF:0000117 PMID:21673655
UniProt RGD
PMID:9126742 PMID:21673655
GO_REF:0000117, RGD:634450 , RGD:8554719
NCBI chr20:28,697,726...28,764,474
Ensembl chr20:28,697,726...28,764,537
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Unc5c
unc-5 netrin receptor C
involved_in acts_upstream_of_or_within
ISS ISO IBA IEA
GO_REF:0000024 UniProtKB:Q9ERC8 (PMID:22685302) MGI:2679336 (PMID:23144223) GO_REF:0000033 GO_REF:0000117
UniProt RGD GO_Central
PMID:22685302 PMID:23144223
GO_REF:0000024 GO_REF:0000033 GO_REF:0000117
NCBI chr 2:230,180,353...230,535,219
Ensembl chr 2:230,180,951...230,535,217
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Unc5d
unc-5 netrin receptor D
involved_in acts_upstream_of_or_within
IEA ISO IBA
GO_REF:0000117 MGI:3603594 (PMID:21673655) GO_REF:0000033
UniProt RGD GO_Central
PMID:21673655
GO_REF:0000033 GO_REF:0000117
NCBI chr16:62,860,119...63,406,932
Ensembl chr16:62,860,174...63,401,143
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Usp33
ubiquitin specific peptidase 33
involved_in
ISO
(PMID:19706539)
RGD
PMID:19706539
NCBI chr 2:241,283,209...241,328,479
Ensembl chr 2:241,292,985...241,328,479
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Vasp
vasodilator-stimulated phosphoprotein
acts_upstream_of_or_within involved_in
ISO IBA
MGI:108360 (PMID:15371503) GO_REF:0000033
RGD GO_Central
PMID:15371503
GO_REF:0000033
NCBI chr 1:78,910,009...78,925,791
Ensembl chr 1:78,910,011...78,925,061
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Vax1
ventral anterior homeobox 1
acts_upstream_of_or_within
ISO
MGI:1859863 (PMID:10601035)
RGD
PMID:10601035
NCBI chr 1:258,324,571...258,342,396
Ensembl chr 1:258,326,276...258,330,192
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Wnt3
Wnt family member 3
acts_upstream_of_or_within
ISO
(PMID:18716223)
RGD
PMID:18716223
NCBI chr10:88,680,198...88,724,170
Ensembl chr10:88,680,248...88,724,099
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Wnt3a
Wnt family member 3A
acts_upstream_of_or_within
ISO
(PMID:18716223)
RGD
PMID:18716223
NCBI chr10:44,034,174...44,078,366
Ensembl chr10:44,034,194...44,078,324
G
Wnt5a
Wnt family member 5A
involved_in
ISO
(PMID:21483795)
RGD
PMID:21483795
NCBI chr16:3,697,032...3,718,230
Ensembl chr16:3,697,032...3,718,234
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App
amyloid beta precursor protein
involved_in acts_upstream_of_or_within
ISS ISO IEA
GO_REF:0000024 MGI:2154522 (PMID:8001115) GO_REF:0000107
UniProt RGD Ensembl
PMID:8001115
GO_REF:0000024 GO_REF:0000107
NCBI chr11:24,019,774...24,236,584
Ensembl chr11:24,019,778...24,236,561
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Diaph1
diaphanous-related formin 1
acts_upstream_of_or_within
ISO
MGI:1858500 (PMID:23890216)
RGD
PMID:23890216
NCBI chr18:29,669,659...29,769,070
Ensembl chr18:29,669,659...29,769,172
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Diaph2
diaphanous-related formin 2
acts_upstream_of_or_within
ISO
MGI:1194490 (PMID:23890216)
RGD
PMID:23890216
NCBI chr X:92,395,189...93,234,521
Ensembl chr X:92,395,251...93,229,869
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Foxg1
forkhead box G1
acts_upstream_of_or_within
ISO
MGI:1857771 (PMID:15240555)
RGD
PMID:15240555
NCBI chr 6:66,674,797...66,677,611
Ensembl chr 6:66,666,587...66,678,607
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Robo1
roundabout guidance receptor 1
involved_in
IEA ISO IEP
GO_REF:0000002 UniProtKB:Q7TPD3 (PMID:18986510)
InterPro RGD
PMID:18986510 PMID:18986510
GO_REF:0000002, RGD:2314842
NCBI chr11:10,580,863...11,621,675
Ensembl chr11:10,580,908...11,620,203
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Robo2
roundabout guidance receptor 2
involved_in
ISO
UniProtKB:O89026 (PMID:18986510)
RGD
PMID:18986510
NCBI chr11:12,528,949...14,096,726
Ensembl chr11:12,528,951...13,041,536
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Robo3
roundabout guidance receptor 3
involved_in
ISO
(PMID:18986510)
RGD
PMID:18986510
NCBI chr 8:37,133,542...37,151,674
Ensembl chr 8:37,133,916...37,151,315
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Apoa1
apolipoprotein A1
NOT|acts_upstream_of_or_within
ISO
MGI:88057 (PMID:7798939)
RGD
PMID:7798939
NCBI chr 8:46,527,251...46,529,035
Ensembl chr 8:46,527,144...46,529,035
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Apoe
apolipoprotein E
NOT|acts_upstream_of_or_within
ISO
MGI:88049 (PMID:7798939)
RGD
PMID:7798939
NCBI chr 1:79,353,924...79,357,852
Ensembl chr 1:79,353,916...79,357,932
G
Bcl2
BCL2, apoptosis regulator
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:9009190)
Ensembl RGD
PMID:9009190
GO_REF:0000107
NCBI chr13:22,689,783...22,853,920
Ensembl chr13:22,684,989...22,853,743 Ensembl chr13:22,684,989...22,853,743
G
Bex1
brain expressed X-linked 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:20731761)
Ensembl RGD
PMID:20731761
GO_REF:0000107
NCBI chr X:99,219,014...99,220,518
Ensembl chr X:99,219,014...99,220,958
G
Chl1
cell adhesion molecule L1-like
IEP NAS
RGD
PMID:14707551 PMID:14707551
RGD:1303346 , RGD:1303346
NCBI chr 4:136,291,504...136,505,830
Ensembl chr 4:136,291,463...136,503,265
G
Cntf
ciliary neurotrophic factor
involved_in
IDA
PMID:16699509
UniProt
PMID:16699509
RGD:12793002
NCBI chr 1:209,887,854...209,889,877
Ensembl chr 1:209,887,854...209,889,877
G
Cspg5
chondroitin sulfate proteoglycan 5
IEP
RGD
PMID:11069908
RGD:1298825
NCBI chr 8:110,220,506...110,234,766
Ensembl chr 8:110,220,653...110,234,758
G
Ctnna1
catenin alpha 1
IEP
RGD
PMID:12387456
RGD:632464
NCBI chr18:26,728,246...26,860,911
Ensembl chr18:26,728,485...26,860,910
G
Dag1
dystroglycan 1
IEP
RGD
PMID:16228655
RGD:11537480
NCBI chr 8:108,890,926...108,955,611
Ensembl chr 8:108,890,929...108,952,325
G
Dhfr
dihydrofolate reductase
involved_in
IMP
PMID:20424322
BHF-UCL
PMID:20424322
RGD:10054082
NCBI chr 2:23,585,876...23,611,199
Ensembl chr 2:23,586,031...23,613,713
G
Enpp1
ectonucleotide pyrophosphatase/phosphodiesterase 1
involved_in
ISO
MGI:1857079 (PMID:21935678)
RGD
PMID:21935678
NCBI chr 1:20,698,746...20,763,741
Ensembl chr 1:20,698,764...20,763,715
G
Erbb2
erb-b2 receptor tyrosine kinase 2
IMP
RGD
PMID:23437108
RGD:405650403
NCBI chr10:83,411,197...83,435,078
Ensembl chr10:83,411,313...83,435,078
G
Folr1
folate receptor alpha
involved_in
ISO
(PMID:20424322)
RGD
PMID:20424322
NCBI chr 1:156,219,460...156,238,436
Ensembl chr 1:156,219,460...156,230,667
G
Gap43
growth associated protein 43
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr11:58,376,371...58,470,047
Ensembl chr11:58,376,371...58,470,045
G
Isl1
ISL LIM homeobox 1
IEP
RGD
PMID:10363827
RGD:2311122
NCBI chr 2:48,079,412...48,090,704
Ensembl chr 2:48,080,522...48,095,584
G
Jak2
Janus kinase 2
IMP
RGD
PMID:15716400
RGD:1641846
NCBI chr 1:226,995,334...227,054,381
Ensembl chr 1:226,995,334...227,054,189
G
Jam3
junctional adhesion molecule 3
IEP
RGD
PMID:22950044
RGD:7488944
NCBI chr 8:25,508,461...25,569,306
Ensembl chr 8:25,507,057...25,569,355
G
Jun
Jun proto-oncogene, AP-1 transcription factor subunit
acts_upstream_of_or_within
ISO
MGI:2445420 (PMID:15233917)
RGD
PMID:15233917
NCBI chr 5:109,894,175...109,897,268
Ensembl chr 5:109,893,145...109,897,656
G
Mag
myelin-associated glycoprotein
acts_upstream_of_or_within
ISO
MGI:1328321 (PMID:20731761)
RGD
PMID:20731761
NCBI chr 1:86,148,227...86,163,726
Ensembl chr 1:86,148,228...86,163,656
G
Mapk8ip3
mitogen-activated protein kinase 8 interacting protein 3
involved_in
IMP
PMID:25944905
UniProt
PMID:25944905
RGD:13673780
NCBI chr10:13,918,417...13,958,335
Ensembl chr10:13,918,400...13,958,273
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Mtr
5-methyltetrahydrofolate-homocysteine methyltransferase
involved_in
IMP
PMID:20424322
BHF-UCL
PMID:20424322
RGD:10054082
NCBI chr17:58,219,998...58,308,560
Ensembl chr17:58,220,071...58,304,822
G
Nefh
neurofilament heavy chain
IDA
RGD
PMID:10646539
RGD:9698439
NCBI chr14:79,830,362...79,840,347
Ensembl chr14:79,830,362...79,840,351
G
Nefm
neurofilament medium chain
IEP
RGD
PMID:15206821
RGD:9698447
NCBI chr15:42,360,449...42,365,753
Ensembl chr15:42,360,454...42,365,755
G
Nrep
neuronal regeneration related protein
involved_in
IEP IBA
GO_REF:0000033
GO_Central RGD
PMID:15485502
GO_REF:0000033, RGD:1540387
NCBI chr18:25,017,069...25,046,593
Ensembl chr18:25,017,083...25,046,591
G
Rxra
retinoid X receptor alpha
IEP
RGD
PMID:16782282
RGD:1643108
NCBI chr 3:10,989,832...11,076,366
Ensembl chr 3:10,989,832...11,073,712
G
Vcan
versican
IEP
RGD
PMID:12526031
RGD:632591
NCBI chr 2:20,761,718...20,860,637
Ensembl chr 2:20,761,718...20,860,637
G
Bdnf
brain-derived neurotrophic factor
acts_upstream_of_or_within
ISO
MGI:1930038 (PMID:15464571)
RGD
PMID:15464571
NCBI chr 3:96,165,042...96,215,621
Ensembl chr 3:96,165,042...96,215,615
G
Foxb1
forkhead box B1
involved_in
ISO
(PMID:10662642), (PMID:11170346)
RGD
PMID:10662642 PMID:11170346
NCBI chr 8:70,407,221...70,409,841
Ensembl chr 8:70,408,186...70,409,781
G
Stxbp1
syntaxin binding protein 1
acts_upstream_of_or_within
ISO
MGI:2183278 (PMID:15182301)
RGD
PMID:15182301
NCBI chr 3:16,076,725...16,138,431
Ensembl chr 3:16,076,391...16,138,369
G
Uchl1
ubiquitin C-terminal hydrolase L1
acts_upstream_of_or_within
ISO
MGI:1856882 (PMID:8474599)
RGD
PMID:8474599
NCBI chr14:41,485,031...41,495,590
Ensembl chr14:41,485,031...41,495,590
G
Amigo1
adhesion molecule with Ig like domain 1
involved_in
IDA
PMID:12629050
UniProt
PMID:12629050
RGD:634626
NCBI chr 2:195,823,138...195,828,593
Ensembl chr 2:195,823,042...195,829,585
G
Arhgap35
Rho GTPase activating protein 35
involved_in
ISS ISO
GO_REF:0000024 (PMID:11283609)
UniProt RGD
PMID:11283609
GO_REF:0000024
NCBI chr 1:77,202,436...77,319,298
Ensembl chr 1:77,202,436...77,319,298
G
Casp3
caspase 3
IMP
RGD
PMID:25898930
RGD:13781947
NCBI chr16:45,662,910...45,681,171
Ensembl chr16:45,662,910...45,684,648
G
Casp6
caspase 6
IMP
RGD
PMID:25898930
RGD:13781947
NCBI chr 2:218,466,063...218,478,503
Ensembl chr 2:218,466,076...218,478,502
G
Cdk5r1
cyclin-dependent kinase 5 regulatory subunit 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:10545161)
UniProt RGD
PMID:10545161
GO_REF:0000024
NCBI chr10:65,484,266...65,485,467
Ensembl chr10:65,483,941...65,488,456
G
Celsr3
cadherin, EGF LAG seven-pass G-type receptor 3
acts_upstream_of_or_within
ISO
MGI:3578665 (PMID:15778712)
RGD
PMID:15778712
NCBI chr 8:109,530,597...109,558,360
Ensembl chr 8:109,530,641...109,558,354
G
Cnr1
cannabinoid receptor 1
acts_upstream_of_or_within
ISO
MGI:1857736 (PMID:20962221)
RGD
PMID:20962221
NCBI chr 5:48,408,543...48,436,099
Ensembl chr 5:48,408,574...48,435,099
G
Cntn2
contactin 2
acts_upstream_of_or_within involved_in
ISO IEA
MGI:2181052 (PMID:18650339) GO_REF:0000107
RGD Ensembl
PMID:18650339
GO_REF:0000107
NCBI chr13:43,942,868...43,975,973
Ensembl chr13:43,947,265...43,975,887
G
Crtac1
cartilage acidic protein 1
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 (PMID:21817055)
GO_Central RGD
PMID:21817055
GO_REF:0000033
NCBI chr 1:241,091,679...241,233,677
Ensembl chr 1:241,078,864...241,233,421
G
Efna5
ephrin A5
NAS
RGD
PMID:7748564
RGD:728210
NCBI chr 9:102,316,753...102,595,480
Ensembl chr 9:102,320,295...102,597,413
G
Ephb2
Eph receptor B2
involved_in
ISO
(PMID:8947026)
RGD
PMID:8947026
NCBI chr 5:148,889,574...149,077,027
Ensembl chr 5:148,897,246...149,077,059
G
Ephb3
Eph receptor B3
involved_in
ISO
(PMID:8947026)
RGD
PMID:8947026
NCBI chr11:79,840,668...79,859,345
Ensembl chr11:79,840,668...79,859,370
G
Fezf2
Fez family zinc finger 2
acts_upstream_of_or_within
ISO
MGI:3046867 (PMID:16284245)
RGD
PMID:16284245
NCBI chr15:12,768,614...12,777,554
Ensembl chr15:12,773,762...12,777,554
G
L1cam
L1 cell adhesion molecule
IMP
RGD
PMID:3856258
RGD:11570517
NCBI chr X:151,597,270...151,623,776
Ensembl chr X:151,597,277...151,623,857
G
Ncam1
neural cell adhesion molecule 1
IMP
RGD
PMID:3856258
RGD:11570517
NCBI chr 8:49,865,629...50,165,687
Ensembl chr 8:49,865,633...50,166,014
G
Ncam2
neural cell adhesion molecule 2
IEP
RGD
PMID:15174086
RGD:1303997
NCBI chr11:20,104,974...20,592,168
Ensembl chr11:20,104,925...20,591,984
G
Ndn
necdin, MAGE family member
acts_upstream_of_or_within
ISO
MGI:2653048 (PMID:15972963)
RGD
PMID:15972963
NCBI chr 1:115,849,168...115,850,767
Ensembl chr 1:115,849,105...115,850,767
G
Nrp1
neuropilin 1
acts_upstream_of_or_within
ISO
MGI:3512099 (PMID:17428830)
RGD
PMID:17428830
NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
G
Ptprz1
protein tyrosine phosphatase, receptor type Z1
IDA
RGD
PMID:16150606
RGD:9590115
NCBI chr 4:51,397,316...51,595,220
Ensembl chr 4:51,397,601...51,595,218
G
Rtn4
reticulon 4
involved_in
IDA ISO IEA
PMID:20573699 (PMID:20573699) GO_REF:0000107
RGD Ensembl
PMID:20573699 PMID:20573699
GO_REF:0000107, RGD:8554113
NCBI chr14:103,450,074...103,497,687
Ensembl chr14:103,449,930...103,497,686
G
Sema3a
semaphorin 3A
acts_upstream_of_or_within
ISO
MGI:2158944 (PMID:17428830)
RGD
PMID:17428830
NCBI chr 4:21,282,398...21,754,834
Ensembl chr 4:21,287,982...21,494,432
G
Sema5a
semaphorin 5A
involved_in
IDA
PMID:15603739
UniProt
PMID:15603739
RGD:8553809
NCBI chr 2:83,309,843...83,741,084
Ensembl chr 2:83,309,843...83,741,084
G
Tnfrsf21
TNF receptor superfamily member 21
IMP
RGD
PMID:25898930
RGD:13781947
NCBI chr 9:17,879,156...17,954,085
Ensembl chr 9:17,879,156...17,954,085
G
Actb
actin, beta
involved_in
IDA IBA
GO_REF:0000033
GO_Central RGD
PMID:12504890
GO_REF:0000033, RGD:728124
NCBI chr12:11,663,112...11,666,697
Ensembl chr12:11,663,109...11,672,877
G
Actbl2
actin, beta-like 2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 2:42,858,020...42,860,767
Ensembl chr 2:42,858,020...42,860,767
G
Actg1
actin, gamma 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr10:105,619,738...105,622,587
Ensembl chr10:105,619,737...105,624,232 Ensembl chr 3:105,619,737...105,624,232
G
Actg1l1
actin, gamma 1 like 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 3:72,977,767...72,979,691
Ensembl chr10:105,619,737...105,624,232 Ensembl chr 3:105,619,737...105,624,232 Ensembl chr 3:105,619,737...105,624,232
G
Actl9
actin-like 9
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 7:14,234,504...14,235,881
Ensembl chr 7:14,234,504...14,235,881
G
Actl9b
actin-like 9b
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:63,830,481...63,831,818
Ensembl chr 1:63,830,223...63,831,822
G
Adcy1
adenylate cyclase 1
acts_upstream_of_or_within
ISO
MGI:1857775 (PMID:17229090)
RGD
PMID:17229090
NCBI chr14:81,911,240...82,020,594
Ensembl chr14:81,911,099...82,028,969
G
Afg3l2
AFG3 like matrix AAA peptidase subunit 2
involved_in acts_upstream_of_or_within
ISO
(PMID:27642048) MGI:1856984 (PMID:2917690)
RGD
PMID:2917690 PMID:27642048
NCBI chr18:60,954,268...60,999,110
Ensembl chr18:60,954,268...60,999,110
G
Als2
alsin Rho guanine nucleotide exchange factor ALS2
IMP
RGD
PMID:16802292
RGD:1599082
NCBI chr 9:60,613,182...60,686,394
Ensembl chr 9:60,613,167...60,670,737
G
Amigo1
adhesion molecule with Ig like domain 1
IDA
RGD
PMID:12629050
RGD:634626
NCBI chr 2:195,823,138...195,828,593
Ensembl chr 2:195,823,042...195,829,585
G
Ank3
ankyrin 3
involved_in
ISO
(PMID:11724816)
RGD
PMID:11724816
NCBI chr20:18,602,267...19,225,831
Ensembl chr20:18,602,786...19,086,300
G
Apc
APC regulator of WNT signaling pathway
acts_upstream_of_or_within
ISO
MGI:98956 (PMID:15207235), (PMID:18716223)
RGD
PMID:15207235 PMID:18716223
NCBI chr18:25,828,558...25,925,511
Ensembl chr18:25,864,222...25,922,696
G
Aplp1
amyloid beta precursor like protein 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:85,696,880...85,707,215
Ensembl chr 1:85,696,882...85,707,155
G
Aplp2
amyloid beta precursor like protein 2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 8:29,599,230...29,662,311
Ensembl chr 8:29,599,230...29,661,855
G
App
amyloid beta precursor protein
involved_in acts_upstream_of_or_within
ISS ISO IBA
GO_REF:0000024 MGI:2136847 (PMID:9390996) GO_REF:0000033
UniProt RGD GO_Central
PMID:9390996
GO_REF:0000024 GO_REF:0000033
NCBI chr11:24,019,774...24,236,584
Ensembl chr11:24,019,778...24,236,561
G
Ark2c
arkadia C-terminal like ring finger ubiquitin ligase 2C
acts_upstream_of_or_within
ISO
MGI:5516581 (PMID:23610558)
RGD
PMID:23610558
NCBI chr18:70,984,566...71,100,836
Ensembl chr18:70,989,731...71,100,836
G
Atl1
atlastin GTPase 1
involved_in
IMP
PMID:16537571
UniProt
PMID:16537571
RGD:8553504
NCBI chr 6:88,377,168...88,475,242
Ensembl chr 6:88,377,239...88,475,204
G
Atp8a2
ATPase phospholipid transporting 8A2
acts_upstream_of_or_within
ISO
MGI:1856273 (PMID:1634998)
RGD
PMID:1634998
NCBI chr15:33,817,309...34,350,193
Ensembl chr15:33,819,755...34,350,223
G
Bcl11b
BCL11 transcription factor B
acts_upstream_of_or_within
ISO
MGI:2663971 (PMID:15664173)
RGD
PMID:15664173
NCBI chr 6:126,834,531...126,927,720
Ensembl chr 6:126,834,531...126,928,224
G
Bcl2
BCL2, apoptosis regulator
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:9009190)
Ensembl RGD
PMID:9009190
GO_REF:0000107
NCBI chr13:22,689,783...22,853,920
Ensembl chr13:22,684,989...22,853,743 Ensembl chr13:22,684,989...22,853,743
G
Brsk1
BR serine/threonine kinase 1
involved_in
ISS ISO IBA
GO_REF:0000024 (PMID:17482548) GO_REF:0000033
UniProt RGD GO_Central
PMID:17482548
GO_REF:0000024 GO_REF:0000033
NCBI chr 1:69,134,166...69,159,947
Ensembl chr 1:69,134,565...69,160,365
G
Brsk2
BR serine/threonine kinase 2
involved_in
ISS ISO IBA IEA
GO_REF:0000024 (PMID:17482548) GO_REF:0000033 GO_REF:0000107
UniProt RGD GO_Central Ensembl
PMID:17482548
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107
NCBI chr 1:197,035,505...197,088,624
Ensembl chr 1:197,035,633...197,088,092
G
Cacna1f
calcium voltage-gated channel subunit alpha1 F
acts_upstream_of_or_within
ISO
MGI:3609549 (PMID:16155113)
RGD
PMID:16155113
NCBI chr X:14,868,096...14,896,413
Ensembl chr X:14,868,024...14,896,413
G
Cck
cholecystokinin
involved_in acts_upstream_of_or_within
ISS ISO
PMID:15152034 (PMID:15152034)
RGD
PMID:15152034 PMID:15152034
RGD:8553273
NCBI chr 8:121,153,499...121,160,194
Ensembl chr 8:121,153,500...121,160,084
G
Cckar
cholecystokinin A receptor
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:15152034)
Ensembl RGD
PMID:15152034
GO_REF:0000107
NCBI chr14:57,292,397...57,300,747
Ensembl chr14:57,292,397...57,300,747
G
Cdk5
cyclin-dependent kinase 5
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 (PMID:11163260)
GO_Central RGD
PMID:11163260
GO_REF:0000033
NCBI chr 4:10,754,682...10,760,110
Ensembl chr 4:10,754,687...10,760,112
G
Cnp
2',3'-cyclic nucleotide 3' phosphodiesterase
acts_upstream_of_or_within
ISO
MGI:3051635 (PMID:12590258)
RGD
PMID:12590258
NCBI chr10:85,511,164...85,517,723
Ensembl chr10:85,511,160...85,517,720
G
Cntn2
contactin 2
IDA
RGD
PMID:2317872
RGD:727707
NCBI chr13:43,942,868...43,975,973
Ensembl chr13:43,947,265...43,975,887
G
Cntnap1
contactin associated protein 1
involved_in
ISO
MGI:2384080 (PMID:28370195)
RGD
PMID:28370195
NCBI chr10:86,109,850...86,125,612
Ensembl chr10:86,111,643...86,125,611
G
Cntnap2
contactin associated protein 2
involved_in
ISO
MGI:2677631 (PMID:28370195)
RGD
PMID:28370195
NCBI chr 4:74,109,455...76,366,434
Ensembl chr 4:74,109,472...76,362,027
G
Creb1
cAMP responsive element binding protein 1
acts_upstream_of_or_within
ISO
MGI:2153538 (PMID:11988169)
RGD
PMID:11988169
NCBI chr 9:65,903,511...65,972,562
Ensembl chr 9:65,903,547...65,970,816
G
Ctnna2
catenin alpha 2
involved_in
ISO
(PMID:16691566)
RGD
PMID:16691566
NCBI chr 4:109,294,249...110,443,409
Ensembl chr 4:109,293,978...110,443,522
G
Dab1
DAB adaptor protein 1
involved_in acts_upstream_of
IEA ISO
GO_REF:0000107 MGI:1861918|MGI:1891699 (PMID:21111240)
Ensembl RGD
PMID:21111240
GO_REF:0000107
NCBI chr 5:118,392,953...119,513,625
Ensembl chr 5:119,140,533...119,510,552
G
Dclk1
doublecortin-like kinase 1
acts_upstream_of_or_within
ISO
MGI:3617379 (PMID:16387639)
RGD
PMID:16387639
NCBI chr 2:139,417,234...139,710,956
Ensembl chr 2:139,417,163...139,710,956
G
Dlx5
distal-less homeobox 5
acts_upstream_of_or_within
ISO
MGI:1857789 (PMID:12533617)
RGD
PMID:12533617
NCBI chr 4:34,999,139...35,003,504
Ensembl chr 4:34,999,139...35,003,407
G
Dock7
dedicator of cytokinesis 7
involved_in
ISO IBA
(PMID:16982419) GO_REF:0000033
RGD GO_Central
PMID:16982419
GO_REF:0000033
NCBI chr 5:113,599,371...113,782,871
Ensembl chr 5:113,600,198...113,782,813
G
Drd2
dopamine receptor D2
acts_upstream_of_or_within
ISO
MGI:2387895 (PMID:11438590)
RGD
PMID:11438590
NCBI chr 8:49,708,927...49,772,876
Ensembl chr 8:49,708,927...49,772,875
G
Drgx
dorsal root ganglia homeobox
acts_upstream_of_or_within
ISO
MGI:2182636 (PMID:11498051)
RGD
PMID:11498051
NCBI chr16:7,854,849...7,884,404
Ensembl chr16:7,854,849...7,900,600
G
Dst
dystonin
acts_upstream_of_or_within
ISO
MGI:1856672|MGI:1856673 (PMID:1634998)
RGD
PMID:1634998
NCBI chr 9:36,135,657...36,529,617
Ensembl chr 9:36,135,284...36,529,615
G
Dvl1
dishevelled segment polarity protein 1
acts_upstream_of_or_within
ISO
(PMID:14734535)
RGD
PMID:14734535
NCBI chr 5:166,456,989...166,468,733
Ensembl chr 5:166,456,686...166,468,664
G
Ephb2
Eph receptor B2
acts_upstream_of
ISO
(PMID:12971893)
RGD
PMID:12971893
NCBI chr 5:148,889,574...149,077,027
Ensembl chr 5:148,897,246...149,077,059
G
Erbb3
erb-b2 receptor tyrosine kinase 3
IEP
RGD
PMID:9030624
RGD:68774
NCBI chr 7:994,549...1,015,876
Ensembl chr 7:996,225...1,015,525
G
Fam168b
family with sequence similarity 168, member B
acts_upstream_of_or_within
ISO
(PMID:20716133)
RGD
PMID:20716133
NCBI chr 9:37,005,569...37,038,631
Ensembl chr 9:37,006,689...37,033,723
G
Fgfr2
fibroblast growth factor receptor 2
acts_upstream_of_or_within
ISO
MGI:2153811 (PMID:17951031)
RGD
PMID:17951031
NCBI chr 1:184,745,418...184,850,655
Ensembl chr 1:184,745,420...184,850,626
G
Flot1
flotillin 1
acts_upstream_of_or_within
ISO
(PMID:19458231)
RGD
PMID:19458231
NCBI chr20:2,917,864...2,927,993
Ensembl chr20:2,917,137...2,927,978
G
Golga2
golgin A2
acts_upstream_of
ISO
(PMID:21111240)
RGD
PMID:21111240
NCBI chr 3:15,583,862...15,604,279
Ensembl chr 3:15,584,039...15,604,279
G
Gsk3b
glycogen synthase kinase 3 beta
acts_upstream_of_or_within
ISO
MGI:98956 (PMID:18716223)
RGD
PMID:18716223
NCBI chr11:62,498,997...62,648,665
Ensembl chr11:62,504,316...62,648,646
G
Igf1r
insulin-like growth factor 1 receptor
IMP
RGD
PMID:16845384
RGD:1624300
NCBI chr 1:121,549,831...121,838,548
Ensembl chr 1:121,550,743...121,831,777
G
Isl1
ISL LIM homeobox 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 2:48,079,412...48,090,704
Ensembl chr 2:48,080,522...48,095,584
G
Isl2
ISL LIM homeobox 2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 8:55,923,805...55,928,790
Ensembl chr 8:55,923,805...55,928,790
G
Kalrn
kalirin, RhoGEF kinase
IDA
RGD
PMID:12177196
RGD:628431
NCBI chr11:66,198,155...66,803,166
Ensembl chr11:66,198,173...66,797,610
G
Klf7
KLF transcription factor 7
acts_upstream_of_or_within
ISO
MGI:3581890 (PMID:15964824)
RGD
PMID:15964824
NCBI chr 9:65,433,683...65,526,372
Ensembl chr 9:65,437,167...65,526,261
G
Llgl1
LLGL scribble cell polarity complex component 1
involved_in
IMP
PMID:21856246
UniProt
PMID:21856246
RGD:8553614
NCBI chr10:45,379,423...45,394,096
Ensembl chr10:45,379,515...45,394,094
G
Map1a
microtubule-associated protein 1A
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 3:108,263,217...108,283,936
Ensembl chr 3:108,263,151...108,282,899
G
Map1b
microtubule-associated protein 1B
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 MGI:97180 (PMID:11891784)
GO_Central RGD
PMID:11891784
GO_REF:0000033
NCBI chr 2:30,817,261...30,910,458
Ensembl chr 2:30,817,261...30,910,317
G
Map1s
microtubule-associated protein 1S
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr16:18,516,759...18,527,777
Ensembl chr16:18,517,574...18,527,988
G
Map2
microtubule-associated protein 2
acts_upstream_of_or_within
ISO
MGI:1306778 (PMID:11891784), (PMID:20600662)
RGD
PMID:11891784 PMID:20600662
NCBI chr 9:67,723,422...67,981,886
Ensembl chr 9:67,723,371...67,979,809
G
Mapt
microtubule-associated protein tau
acts_upstream_of_or_within
ISO
MGI:1306778 (PMID:11891784)
RGD
PMID:11891784
NCBI chr10:89,138,644...89,236,137
Ensembl chr10:89,138,627...89,236,129
G
Metrn
meteorin, glial cell differentiation regulator
acts_upstream_of
ISO
(PMID:15085178)
RGD
PMID:15085178
NCBI chr10:14,816,684...14,818,702
Ensembl chr10:14,816,572...14,818,701
G
Myh10
myosin heavy chain 10
acts_upstream_of_or_within
ISO
MGI:2386445 (PMID:11283949)
RGD
PMID:11283949
NCBI chr10:53,393,901...53,525,174
Ensembl chr10:53,394,389...53,525,165
G
Ndn
necdin, MAGE family member
acts_upstream_of_or_within
ISO
MGI:2653048 (PMID:15649943), (PMID:15972963)
RGD
PMID:15649943 PMID:15972963
NCBI chr 1:115,849,168...115,850,767
Ensembl chr 1:115,849,105...115,850,767
G
Nefl
neurofilament light chain
acts_upstream_of
ISO
(PMID:7946341)
RGD
PMID:7946341
NCBI chr15:42,301,920...42,305,793
Ensembl chr15:42,301,916...42,305,793
G
Nkx2-8
NK2 homeobox 8
acts_upstream_of_or_within
ISO
MGI:2655862 (PMID:16267219)
RGD
PMID:16267219
NCBI chr 6:74,086,274...74,087,977
Ensembl chr 6:74,086,274...74,087,977
G
Nolc1
nucleolar and coiled-body phosphoprotein 1
acts_upstream_of_or_within
ISO
(PMID:24794856)
RGD
PMID:24794856
NCBI chr 1:244,921,275...244,932,089
Ensembl chr 1:244,921,377...244,932,088
G
Notch1
notch receptor 1
acts_upstream_of_or_within
ISO
MGI:1932522|MGI:1933835 (PMID:15598981), (PMID:16120638)
RGD
PMID:15598981 PMID:16120638
NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
G
Npr2
natriuretic peptide receptor 2
involved_in
ISO
MGI:1856702|MGI:5567995 (PMID:17954614), (PMID:30249793)
RGD
PMID:17954614 PMID:30249793
NCBI chr 5:57,883,171...57,901,590
Ensembl chr 5:57,883,171...57,901,580
G
Ntn1
netrin 1
acts_upstream_of_or_within
ISO
(PMID:10908620)
RGD
PMID:10908620
NCBI chr10:52,899,933...53,098,591
Ensembl chr10:52,899,934...53,085,326
G
Ntng1
netrin G1
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 (PMID:11804778)
GO_Central RGD
PMID:11804778
GO_REF:0000033
NCBI chr 2:197,462,785...197,827,681
Ensembl chr 2:197,463,945...197,826,997
G
Ntng2
netrin G2
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 (PMID:11804778)
GO_Central RGD
PMID:11804778
GO_REF:0000033
NCBI chr 3:12,492,574...12,551,104
Ensembl chr 3:12,492,639...12,545,890
G
Numb
NUMB, endocytic adaptor protein
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1932085 (PMID:15598981)
Ensembl RGD
PMID:15598981
GO_REF:0000107
NCBI chr 6:103,431,400...103,553,422
Ensembl chr 6:103,431,400...103,553,354
G
Numbl
NUMB-like, endocytic adaptor protein
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2429686 (PMID:15598981)
Ensembl RGD
PMID:15598981
GO_REF:0000107
NCBI chr 1:82,549,814...82,573,788
Ensembl chr 1:82,550,054...82,573,776
G
Pak3
p21 (RAC1) activated kinase 3
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:21115725) GO_REF:0000107
UniProt RGD Ensembl
PMID:21115725
GO_REF:0000024 GO_REF:0000107
NCBI chr X:107,116,308...107,374,342
Ensembl chr X:107,260,898...107,368,314
G
Pax6
paired box 6
acts_upstream_of_or_within
ISO
MGI:1856158 (PMID:15514979)
RGD
PMID:15514979
NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
G
Picalm
phosphatidylinositol binding clathrin assembly protein
involved_in
IEA ISO IMP
GO_REF:0000107 (PMID:18842885)
Ensembl RGD
PMID:18842885 PMID:18842885
GO_REF:0000107, RGD:8554167
NCBI chr 1:144,056,415...144,138,045
Ensembl chr 1:144,056,721...144,137,557
G
Pip5k1c
phosphatidylinositol-4-phosphate 5-kinase type 1 gamma
acts_upstream_of_or_within
ISO
(PMID:14741049)
RGD
PMID:14741049
NCBI chr 7:8,397,406...8,426,030
Ensembl chr 7:8,397,406...8,425,988
G
Pitpna
phosphatidylinositol transfer protein, alpha
involved_in
IEA ISO
GO_REF:0000107 (PMID:16244667)
Ensembl RGD
PMID:16244667
GO_REF:0000107
NCBI chr10:60,430,712...60,473,564
Ensembl chr10:60,430,748...60,471,342
G
Plppr4
phospholipid phosphatase related 4
involved_in
IDA IBA
GO_REF:0000033
GO_Central RGD
PMID:12730698
GO_REF:0000033, RGD:1299556
NCBI chr 2:205,371,317...205,412,302
Ensembl chr 2:205,371,322...205,412,302
G
Potef
POTE ankyrin domain family, member F
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr18:23,626,518...23,629,132
Ensembl chr 3:72,977,767...72,979,694
G
Pou4f2
POU class 4 homeobox 2
acts_upstream_of_or_within
ISO
MGI:2429632|MGI:2429634 (PMID:10357904)
RGD
PMID:10357904
NCBI chr19:29,486,686...29,490,327
Ensembl chr19:29,486,686...29,490,327
G
Prickle1
prickle planar cell polarity protein 1
involved_in
IEA ISO
GO_REF:0000107 MGI:5645931 (PMID:25190059)
Ensembl RGD
PMID:25190059
GO_REF:0000107
NCBI chr 7:124,639,142...124,735,027
Ensembl chr 7:124,639,142...124,658,113
G
Ptk2
protein tyrosine kinase 2
acts_upstream_of
ISO
MGI:1857596 (PMID:15378065)
RGD
PMID:15378065
NCBI chr 7:105,126,725...105,331,848
Ensembl chr 7:105,126,728...105,331,783
G
Ptpn11
protein tyrosine phosphatase, non-receptor type 11
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:12482708)
Ensembl RGD
PMID:12482708
GO_REF:0000107
NCBI chr12:35,365,436...35,424,925
Ensembl chr12:35,383,144...35,424,925
G
Ptprz1
protein tyrosine phosphatase, receptor type Z1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:10234020)
Ensembl RGD
PMID:10234020
GO_REF:0000107
NCBI chr 4:51,397,316...51,595,220
Ensembl chr 4:51,397,601...51,595,218
G
Rab10
RAB10, member RAS oncogene family
involved_in
IMP
PMID:21856246
UniProt
PMID:21856246
RGD:8553614
NCBI chr 6:26,267,081...26,319,739
Ensembl chr 6:26,266,859...26,320,193
G
Rab3a
RAB3A, member RAS oncogene family
involved_in acts_upstream_of_or_within
IEA ISO IBA
GO_REF:0000107 MGI:3762127 (PMID:11359932) GO_REF:0000033
Ensembl RGD GO_Central
PMID:11359932
GO_REF:0000033 GO_REF:0000107
NCBI chr16:18,684,185...18,688,297
Ensembl chr16:18,684,188...18,688,336
G
Rab8a
RAB8A, member RAS oncogene family
involved_in
IMP
PMID:21856246
UniProt
PMID:21856246
RGD:8553614
NCBI chr16:17,654,027...17,675,385
Ensembl chr16:17,654,034...17,675,678
G
Rtn4r
reticulon 4 receptor
acts_upstream_of_or_within
ISO
(PMID:11201742)
RGD
PMID:11201742
NCBI chr11:82,844,309...82,869,251
Ensembl chr11:82,844,309...82,869,466
G
Ryk
receptor-like tyrosine kinase
involved_in acts_upstream_of_or_within
IGI ISO IBA
PMID:23517308 MGI:98956 (PMID:15454084) GO_REF:0000033
RGD GO_Central
PMID:15454084 PMID:23517308
GO_REF:0000033, RGD:11054651
NCBI chr 8:103,419,338...103,492,083
Ensembl chr 8:103,419,275...103,491,698
G
Scn11a
sodium voltage-gated channel alpha subunit 11
involved_in
IEA ISO
GO_REF:0000107 MGI:3818305 (PMID:22641814)
Ensembl RGD
PMID:22641814
GO_REF:0000107
NCBI chr 8:119,495,550...119,567,044
Ensembl chr 8:119,496,769...119,567,044
G
Sema4a
semaphorin 4A
involved_in
ISO
(PMID:20043131)
RGD
PMID:20043131
NCBI chr 2:173,896,432...173,917,903
Ensembl chr 2:173,896,439...173,914,442
G
Sema4d
semaphorin 4D
acts_upstream_of
ISO
MGI:2154238|MGI:2154239|MGI:97321|MGI:97383 (PMID:15330859)
RGD
PMID:15330859
NCBI chr17:13,430,324...13,537,146
Ensembl chr17:13,430,379...13,537,138
G
Shtn1
shootin 1
involved_in acts_upstream_of_or_within
IMP IDA
PMID:17439943 PMID:17030985
HGNC-UCL MGI
PMID:17439943 PMID:17030985
RGD:8554472 , RGD:8554246
NCBI chr 1:258,121,966...258,225,861
Ensembl chr 1:258,121,968...258,228,265
G
Slit1
slit guidance ligand 1
acts_upstream_of_or_within
ISO
MGI:2179459 (PMID:12097499)
RGD
PMID:12097499
NCBI chr 1:240,409,559...240,558,127
Ensembl chr 1:240,409,561...240,558,127
G
Slit2
slit guidance ligand 2
acts_upstream_of_or_within
ISO
MGI:2179460 (PMID:12097499)
RGD
PMID:12097499
NCBI chr14:62,616,337...62,955,934
Ensembl chr14:62,617,067...62,955,948
G
Slitrk1
SLIT and NTRK-like family, member 1
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 (PMID:14550773)
GO_Central RGD
PMID:14550773
GO_REF:0000033
NCBI chr15:85,723,252...85,727,290
Ensembl chr15:85,724,475...85,727,509
G
Slitrk2
SLIT and NTRK-like family, member 2
involved_in acts_upstream_of_or_within
ISO IBA
(PMID:35840571) (PMID:14550773) GO_REF:0000033
RGD GO_Central
PMID:14550773 PMID:35840571
GO_REF:0000033
NCBI chr X:145,246,448...145,259,983
Ensembl chr X:145,246,460...145,271,220
G
Slitrk3
SLIT and NTRK-like family, member 3
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 (PMID:14550773)
GO_Central RGD
PMID:14550773
GO_REF:0000033
NCBI chr 2:157,680,067...157,697,404
Ensembl chr 2:157,687,535...157,696,709
G
Slitrk4
SLIT and NTRK-like family, member 4
acts_upstream_of_or_within
ISO
(PMID:14550773)
RGD
PMID:14550773
NCBI chr X:142,706,495...142,718,968
Ensembl chr X:142,706,338...142,718,575
G
Slitrk5
SLIT and NTRK-like family, member 5
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 (PMID:14550773)
GO_Central RGD
PMID:14550773
GO_REF:0000033
NCBI chr15:88,848,123...88,858,809
Ensembl chr15:88,847,535...88,856,836
G
Slitrk6
SLIT and NTRK-like family, member 6
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 (PMID:14550773)
GO_Central RGD
PMID:14550773
GO_REF:0000033
NCBI chr15:87,563,506...87,570,125
Ensembl chr15:87,563,322...87,570,393
G
Smn1
survival of motor neuron 1, telomeric
acts_upstream_of_or_within
ISO
(PMID:20176735)
RGD
PMID:20176735
NCBI chr 2:31,490,018...31,501,065
Ensembl chr 2:31,490,015...31,501,060
G
Snap25
synaptosome associated protein 25
IEP
RGD
PMID:15478103
RGD:1581079
NCBI chr 3:124,041,898...124,123,761
Ensembl chr 3:124,041,898...124,123,760
G
Snap91
synaptosome associated protein 91
involved_in
IMP
PMID:18842885
BHF-UCL
PMID:18842885
RGD:8554167
NCBI chr 8:87,738,056...87,852,690
Ensembl chr 8:87,738,824...87,852,367
G
Spast
spastin
involved_in
IEA
GO_REF:0000104
UniProt
GO_REF:0000104
NCBI chr 6:21,055,349...21,106,586
Ensembl chr 6:21,055,349...21,107,954
G
Spg11
SPG11 vesicle trafficking associated, spatacsin
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 3:109,007,658...109,072,904
Ensembl chr 3:109,008,135...109,072,911
G
Sptbn4
spectrin, beta, non-erythrocytic 4
acts_upstream_of_or_within
ISO
MGI:1856939 (PMID:1634998)
RGD
PMID:1634998
NCBI chr 1:82,650,750...82,738,345
Ensembl chr 1:82,650,751...82,737,228
G
Ssna1
SS nuclear autoantigen 1
involved_in
ISO
(PMID:30250060)
RGD
PMID:30250060
NCBI chr 3:8,084,949...8,086,417
Ensembl chr 3:8,084,974...8,086,356
G
Stk11
serine/threonine kinase 11
involved_in acts_upstream_of
IMP ISO
(PMID:17482548) MGI:1891699 (PMID:21111240)
RGD
PMID:17482548 PMID:21111240 PMID:12114407
RGD:2291948
NCBI chr 7:9,574,553...9,591,315
Ensembl chr 7:9,575,269...9,591,315
G
Stk25
serine/threonine kinase 25
acts_upstream_of
ISO
MGI:108554|MGI:1341870 (PMID:21111240)
RGD
PMID:21111240
NCBI chr 9:94,161,834...94,174,095
Ensembl chr 9:94,161,836...94,174,244
G
Stmn1
stathmin 1
acts_upstream_of_or_within
ISO
MGI:2655259 (PMID:11839567)
RGD
PMID:11839567
NCBI chr 5:146,680,757...146,687,154
Ensembl chr 5:146,681,436...146,687,154
G
Syngap1
synaptic Ras GTPase activating protein 1
involved_in acts_upstream_of
IEA ISO
GO_REF:0000107 (PMID:15014045)
Ensembl RGD
PMID:15014045
GO_REF:0000107
NCBI chr20:5,026,366...5,056,659
Ensembl chr20:5,026,364...5,056,672
G
Taok2
TAO kinase 2
involved_in
ISO IEA
UniProtKB:Q6ZQ29 (PMID:22683681) UniProtKB:Q9UL54 (PMID:22683681) GO_REF:0000107
RGD Ensembl
PMID:22683681
GO_REF:0000107
NCBI chr 1:181,475,708...181,494,738
Ensembl chr 1:181,475,711...181,494,613
G
Tbce
tubulin folding cofactor E
acts_upstream_of_or_within
ISO
MGI:1856997 (PMID:12446740)
RGD
PMID:12446740
NCBI chr17:51,290,143...51,336,090
Ensembl chr17:51,290,202...51,336,089
G
Tnn
tenascin N
acts_upstream_of_or_within
ISO
(PMID:12812753)
RGD
PMID:12812753
NCBI chr13:72,319,160...72,386,362
Ensembl chr13:72,319,155...72,408,156
G
Top2b
DNA topoisomerase II beta
acts_upstream_of_or_within
ISO
MGI:2179201 (PMID:10615047)
RGD
PMID:10615047
NCBI chr15:9,051,340...9,111,721
Ensembl chr15:9,051,341...9,112,085
G
Trim46
tripartite motif-containing 46
involved_in acts_upstream_of_or_within
IEA ISO IBA
GO_REF:0000107 (PMID:26671463) GO_REF:0000033
Ensembl RGD GO_Central
PMID:26671463
GO_REF:0000033 GO_REF:0000107
NCBI chr 2:174,641,494...174,654,237
Ensembl chr 2:174,641,496...174,654,141
G
Uchl1
ubiquitin C-terminal hydrolase L1
acts_upstream_of_or_within
ISO
MGI:1856882 (PMID:1630580)
RGD
PMID:1630580
NCBI chr14:41,485,031...41,495,590
Ensembl chr14:41,485,031...41,495,590
G
Ulk1
unc-51 like autophagy activating kinase 1
acts_upstream_of_or_within
ISO
(PMID:15014045)
RGD
PMID:15014045
NCBI chr12:45,851,710...45,877,966
Ensembl chr12:45,851,710...45,877,966
G
Vax2
ventral anterior homeobox 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2159246 (PMID:11830579)
Ensembl RGD
PMID:11830579
GO_REF:0000107
NCBI chr 4:116,195,528...116,219,597
Ensembl chr 4:116,195,528...116,219,594
G
Wnt3a
Wnt family member 3A
acts_upstream_of_or_within
ISO
MGI:101766 (PMID:15454084)
RGD
PMID:15454084
NCBI chr10:44,034,174...44,078,366
Ensembl chr10:44,034,194...44,078,324
G
Wnt5a
Wnt family member 5A
involved_in
ISO
(PMID:23517308)
RGD
PMID:23517308
NCBI chr16:3,697,032...3,718,230
Ensembl chr16:3,697,032...3,718,234
G
Zdhhc17
zinc finger DHHC-type palmitoyltransferase 17
involved_in
ISS IBA ISO IEA
GO_REF:0000024 GO_REF:0000033 (PMID:26232532) GO_REF:0000107
UniProt GO_Central RGD Ensembl
PMID:26232532
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107
NCBI chr 7:46,369,963...46,433,691
Ensembl chr 7:46,369,988...46,433,764
G
Col25a1
collagen type XXV alpha 1 chain
acts_upstream_of_or_within
ISO
(PMID:24453327)
RGD
PMID:24453327
NCBI chr 2:218,755,152...219,154,348
Ensembl chr 2:218,755,691...219,153,501
G
Ece1
endothelin converting enzyme 1
involved_in
IEA ISO
GO_REF:0000107 MGI:2158947 (PMID:30735130)
Ensembl RGD
PMID:30735130
GO_REF:0000107
NCBI chr 5:150,077,679...150,179,375
Ensembl chr 5:150,077,644...150,179,371
G
Edn1
endothelin 1
involved_in
ISO
MGI:1857637 (PMID:24875861), (PMID:30735130)
RGD
PMID:24875861 PMID:30735130
NCBI chr17:22,454,924...22,460,812
Ensembl chr17:22,454,420...22,460,885
G
Ednra
endothelin receptor type A
involved_in
IEA ISO
GO_REF:0000107 MGI:1857473|MGI:2687362 (PMID:24875861), (PMID:30735130)
Ensembl RGD
PMID:24875861 PMID:30735130
GO_REF:0000107
NCBI chr19:30,233,540...30,303,727
Ensembl chr19:30,233,571...30,297,049
G
Fgfr3
fibroblast growth factor receptor 3
acts_upstream_of_or_within
ISO
MGI:1931521 (PMID:17557302)
RGD
PMID:17557302
NCBI chr14:76,987,242...77,002,671
Ensembl chr14:76,987,993...77,003,341
G
Itga4
integrin subunit alpha 4
IMP
RGD
PMID:16181811
RGD:13593536
NCBI chr 3:64,162,764...64,235,010
Ensembl chr 3:64,163,085...64,233,715
G
Npr2
natriuretic peptide receptor 2
involved_in
IEA ISO
GO_REF:0000107 MGI:1856702 (PMID:25473838)
Ensembl RGD
PMID:25473838
GO_REF:0000107
NCBI chr 5:57,883,171...57,901,590
Ensembl chr 5:57,883,171...57,901,580
G
Nptx1
neuronal pentraxin 1
involved_in acts_upstream_of_or_within
IEA ISO IBA
GO_REF:0000107 MGI:1858209 (PMID:16763034) GO_REF:0000033
Ensembl RGD GO_Central
PMID:16763034
GO_REF:0000033 GO_REF:0000107
NCBI chr10:104,811,107...104,820,358
Ensembl chr10:104,811,403...104,820,367
G
Nrp1
neuropilin 1
involved_in
ISO
(PMID:22790009)
RGD
PMID:22790009
NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
G
Ntrk1
neurotrophic receptor tyrosine kinase 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:8815902)
UniProt RGD
PMID:8815902
GO_REF:0000024
NCBI chr 2:173,236,961...173,253,806
Ensembl chr 2:173,236,963...173,253,770
G
Sema3a
semaphorin 3A
involved_in
ISO
(PMID:22790009)
RGD
PMID:22790009
NCBI chr 4:21,282,398...21,754,834
Ensembl chr 4:21,287,982...21,494,432
G
Mycbp2
MYC binding protein 2
acts_upstream_of_or_within
ISO
MGI:3777464 (PMID:18031680)
RGD
PMID:18031680
NCBI chr15:79,937,354...80,175,432
Ensembl chr15:79,937,354...80,175,498
G
Nrp1
neuropilin 1
involved_in
ISO
(PMID:18804103)
RGD
PMID:18804103
NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
G
Plxna3
plexin A3
involved_in
ISO
(PMID:18804103)
RGD
PMID:18804103
NCBI chr X:152,115,699...152,131,608
Ensembl chr X:152,115,819...152,131,603
G
Plxna4
plexin A4
involved_in
ISO
(PMID:18804103)
RGD
PMID:18804103
NCBI chr 4:60,720,246...61,162,206
Ensembl chr 4:60,720,255...61,162,206
G
Sema3a
semaphorin 3A
involved_in
ISO
(PMID:18804103)
RGD
PMID:18804103
NCBI chr 4:21,282,398...21,754,834
Ensembl chr 4:21,287,982...21,494,432
G
Sema3f
semaphorin 3F
involved_in
ISO
(PMID:18804103)
RGD
PMID:18804103
NCBI chr 8:108,357,629...108,386,569
Ensembl chr 8:108,357,629...108,387,083
G
Tctn1
tectonic family member 1
acts_upstream_of_or_within
ISO
MGI:3716885 (PMID:16357211)
RGD
PMID:16357211
NCBI chr12:34,309,795...34,347,190
Ensembl chr12:34,309,897...34,342,267
G
Arhgap35
Rho GTPase activating protein 35
involved_in
ISS ISO
GO_REF:0000024 (PMID:11283609)
UniProt RGD
PMID:11283609
GO_REF:0000024
NCBI chr 1:77,202,436...77,319,298
Ensembl chr 1:77,202,436...77,319,298
G
Arhgef28
Rho guanine nucleotide exchange factor 28
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:15378065)
Ensembl RGD
PMID:15378065
GO_REF:0000107
NCBI chr 2:29,263,888...29,560,595
Ensembl chr 2:29,263,886...29,560,672
G
Atg7
autophagy related 7
acts_upstream_of_or_within
ISO
MGI:3587769 (PMID:20577052)
RGD
PMID:20577052
NCBI chr 4:147,718,663...147,925,656
Ensembl chr 4:147,718,752...147,925,593
G
B4galt5
beta-1,4-galactosyltransferase 5
involved_in
ISO
(PMID:30114188)
RGD
PMID:30114188
NCBI chr 3:156,018,056...156,033,983
Ensembl chr 3:156,018,053...156,070,074
G
B4galt6
beta-1,4-galactosyltransferase 6
involved_in
ISS ISO
GO_REF:0000024 (PMID:30114188)
UniProt RGD
PMID:30114188
GO_REF:0000024
NCBI chr18:11,958,382...12,015,247
Ensembl chr18:11,958,390...12,015,247
G
Chrnb2
cholinergic receptor nicotinic beta 2 subunit
acts_upstream_of_or_within
ISO
MGI:2158714 (PMID:12097474)
RGD
PMID:12097474
NCBI chr 2:175,181,402...175,189,619
Ensembl chr 2:175,181,402...175,189,619
G
Ndel1
nudE neurodevelopment protein 1-like 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:15208636)
Ensembl RGD
PMID:15208636
GO_REF:0000107
NCBI chr10:53,505,628...53,582,025
Ensembl chr10:53,516,491...53,570,907
G
Prkca
protein kinase C, alpha
IMP
RGD
PMID:18062921
RGD:2293300
NCBI chr10:92,889,390...93,288,013
Ensembl chr10:92,894,012...93,288,012
G
Pten
phosphatase and tensin homolog
involved_in
ISO
(PMID:16675393)
RGD
PMID:16675393
NCBI chr 1:230,630,443...230,697,070
Ensembl chr 1:230,630,338...230,696,838
G
Ptk2
protein tyrosine kinase 2
acts_upstream_of_or_within
ISO
MGI:1857596 (PMID:15378065)
RGD
PMID:15378065
NCBI chr 7:105,126,725...105,331,848
Ensembl chr 7:105,126,728...105,331,783
G
Bhlhe22
basic helix-loop-helix family, member e22
acts_upstream_of_or_within
ISO
MGI:2684610|MGI:4440742|MGI:4440744 (PMID:22284184)
RGD
PMID:22284184
NCBI chr 2:100,486,400...100,489,510
Ensembl chr 2:100,486,400...100,489,510
G
Chrnb2
cholinergic receptor nicotinic beta 2 subunit
acts_upstream_of_or_within
ISO
MGI:1926253|MGI:2158714 (PMID:11344259), (PMID:14687550), (PMID:15608630)
RGD
PMID:11344259 PMID:14687550 PMID:15608630
NCBI chr 2:175,181,402...175,189,619
Ensembl chr 2:175,181,402...175,189,619
G
Dclk1
doublecortin-like kinase 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1277171 (PMID:16387638)
Ensembl RGD
PMID:16387638
GO_REF:0000107
NCBI chr 2:139,417,234...139,710,956
Ensembl chr 2:139,417,163...139,710,956
G
Dcx
doublecortin
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1330861 (PMID:16387638)
Ensembl RGD
PMID:16387638
GO_REF:0000107
NCBI chr X:107,430,767...107,573,612
Ensembl chr X:107,430,767...107,507,476
G
Ephb1
Eph receptor B1
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 MGI:2677305|MGI:2677312 (PMID:12971893)
UniProt RGD
PMID:12971893
GO_REF:0000024
NCBI chr 8:102,507,549...102,944,839
Ensembl chr 8:102,507,549...102,944,839
G
Ephb2
Eph receptor B2
acts_upstream_of_or_within
ISO
(PMID:12971893)
RGD
PMID:12971893
NCBI chr 5:148,889,574...149,077,027
Ensembl chr 5:148,897,246...149,077,059
G
Ephb3
Eph receptor B3
acts_upstream_of_or_within
ISO
(PMID:12971893)
RGD
PMID:12971893
NCBI chr11:79,840,668...79,859,345
Ensembl chr11:79,840,668...79,859,370
G
Kifbp
kinesin family binding protein
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:30,512,899...30,532,504
Ensembl chr20:30,512,901...30,532,476
G
Mycbp2
MYC binding protein 2
acts_upstream_of_or_within involved_in
ISO
MGI:3777464|MGI:3777465 (PMID:18031680) (PMID:17901218)
RGD
PMID:17901218 PMID:18031680
NCBI chr15:79,937,354...80,175,432
Ensembl chr15:79,937,354...80,175,498
G
Nr4a2
nuclear receptor subfamily 4, group A, member 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2157566 (PMID:10585298)
Ensembl RGD
PMID:10585298
GO_REF:0000107
NCBI chr 3:41,689,847...41,707,036
Ensembl chr 3:41,689,851...41,697,877
G
Prdm8
PR/SET domain 8
acts_upstream_of_or_within
ISO
MGI:5315763 (PMID:22284184)
RGD
PMID:22284184
NCBI chr14:11,403,202...11,424,059
Ensembl chr14:11,404,407...11,410,993
G
Sptbn4
spectrin, beta, non-erythrocytic 4
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 MGI:3710201 (PMID:17197442)
GO_Central RGD
PMID:17197442
GO_REF:0000033
NCBI chr 1:82,650,750...82,738,345
Ensembl chr 1:82,650,751...82,737,228
G
Lrp1
LDL receptor related protein 1
IMP
RGD
PMID:26598525
RGD:11097297
NCBI chr 7:63,380,325...63,461,029
Ensembl chr 7:63,380,356...63,460,910
G
Lrp2
LDL receptor related protein 2
IMP
RGD
PMID:26598525
RGD:11097297
NCBI chr 3:54,189,305...54,346,769
Ensembl chr 3:54,189,308...54,346,708
G
Wnt7b
Wnt family member 7B
involved_in
ISO
(PMID:21106844)
RGD
PMID:21106844
NCBI chr 7:116,634,817...116,679,459
Ensembl chr 7:116,634,814...116,679,581
G
Wnt5a
Wnt family member 5A
involved_in
IEA ISO
GO_REF:0000107 (PMID:21106844)
Ensembl RGD
PMID:21106844
GO_REF:0000107
NCBI chr16:3,697,032...3,718,230
Ensembl chr16:3,697,032...3,718,234
G
Ntn1
netrin 1
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:28483977) GO_REF:0000107
UniProt RGD Ensembl
PMID:28483977
GO_REF:0000024 GO_REF:0000107
NCBI chr10:52,899,933...53,098,591
Ensembl chr10:52,899,934...53,085,326
G
Unc5c
unc-5 netrin receptor C
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:28483977) GO_REF:0000107
UniProt RGD Ensembl
PMID:28483977
GO_REF:0000024 GO_REF:0000107
NCBI chr 2:230,180,353...230,535,219
Ensembl chr 2:230,180,951...230,535,217
G
Plxna4
plexin A4
acts_upstream_of_or_within
ISO
MGI:3578655 (PMID:15814794)
RGD
PMID:15814794
NCBI chr 4:60,720,246...61,162,206
Ensembl chr 4:60,720,255...61,162,206
G
Ryk
receptor-like tyrosine kinase
involved_in
ISO
UniProtKB:P22725 (PMID:23517308)
RGD
PMID:23517308
NCBI chr 8:103,419,338...103,492,083
Ensembl chr 8:103,419,275...103,491,698
G
Wnt5a
Wnt family member 5A
involved_in
IEA ISO
GO_REF:0000107 (PMID:21106844), (PMID:23517308)
Ensembl RGD
PMID:21106844 PMID:23517308
GO_REF:0000107
NCBI chr16:3,697,032...3,718,230
Ensembl chr16:3,697,032...3,718,234
G
Bdnf
brain-derived neurotrophic factor
involved_in
ISO IEA
(PMID:19036963) GO_REF:0000107
RGD Ensembl
PMID:19036963
GO_REF:0000107
NCBI chr 3:96,165,042...96,215,621
Ensembl chr 3:96,165,042...96,215,615
G
Cd2ap
CD2-associated protein
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:27076424)
Ensembl RGD
PMID:27076424
GO_REF:0000107
NCBI chr 9:18,086,744...18,182,744
Ensembl chr 9:18,086,984...18,182,199
G
Dvl1
dishevelled segment polarity protein 1
acts_upstream_of_or_within
ISO
(PMID:18716223)
RGD
PMID:18716223
NCBI chr 5:166,456,989...166,468,733
Ensembl chr 5:166,456,686...166,468,664
G
Efna5
ephrin A5
involved_in
ISO
(PMID:19036963)
RGD
PMID:19036963
NCBI chr 9:102,316,753...102,595,480
Ensembl chr 9:102,320,295...102,597,413
G
Hdac6
histone deacetylase 6
acts_upstream_of_or_within
ISO
(PMID:24113571)
RGD
PMID:24113571
NCBI chr X:14,550,645...14,572,445
Ensembl chr X:14,551,044...14,572,441
G
Ist1
IST1 factor associated with ESCRT-III
involved_in acts_upstream_of
IEA ISO
GO_REF:0000107 MGI:2139806 (PMID:22619377)
Ensembl RGD
PMID:22619377
GO_REF:0000107
NCBI chr19:37,648,840...37,671,019
Ensembl chr19:37,648,095...37,670,956
G
Lpar3
lysophosphatidic acid receptor 3
involved_in acts_upstream_of
IEA ISO
GO_REF:0000107 (PMID:22465231)
Ensembl RGD
PMID:22465231
GO_REF:0000107
NCBI chr 2:235,125,234...235,193,916
Ensembl chr 2:235,149,065...235,193,357
G
Nfix
nuclear factor I X
acts_upstream_of_or_within
ISO
MGI:3802570 (PMID:30272140)
RGD
PMID:30272140
NCBI chr19:23,355,388...23,450,360
Ensembl chr19:23,355,498...23,448,265
G
Nin
ninein
acts_upstream_of_or_within
ISO
MGI:1344407 (PMID:25741725)
RGD
PMID:25741725
NCBI chr 6:88,525,405...88,627,710
Ensembl chr 6:88,525,742...88,627,639
G
Npr2
natriuretic peptide receptor 2
involved_in
IEA ISO
GO_REF:0000107 MGI:1856702|MGI:5567995 (PMID:17954614), (PMID:24431432), (PMID:25473838)
Ensembl RGD
PMID:17954614 PMID:24431432 PMID:25473838
GO_REF:0000107
NCBI chr 5:57,883,171...57,901,590
Ensembl chr 5:57,883,171...57,901,580
G
Prkg1
protein kinase cGMP-dependent 1
involved_in
ISO
MGI:2668650 (PMID:17954614)
RGD
PMID:17954614
NCBI chr 1:228,409,605...229,638,794
Ensembl chr 1:228,408,947...229,639,080
G
Rnd2
Rho family GTPase 2
acts_upstream_of
ISO
(PMID:22465231)
RGD
PMID:22465231
NCBI chr10:86,399,151...86,402,750
Ensembl chr10:86,399,148...86,402,742
G
Septin7
septin 7
acts_upstream_of_or_within
ISO
(PMID:24113571)
RGD
PMID:24113571
NCBI chr 8:23,719,448...23,783,247
Ensembl chr 8:23,716,030...23,783,243
G
Spg21
SPG21 abhydrolase domain containing, maspardin
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:20661613), (PMID:26978163) GO_REF:0000107
RGD Ensembl
PMID:20661613 PMID:26978163
GO_REF:0000107
NCBI chr 8:65,980,992...66,008,537
Ensembl chr 8:65,980,962...66,008,536
G
Ulk1
unc-51 like autophagy activating kinase 1
acts_upstream_of
ISO
(PMID:17389358)
RGD
PMID:17389358
NCBI chr12:45,851,710...45,877,966
Ensembl chr12:45,851,710...45,877,966
G
Ulk2
unc-51 like autophagy activating kinase 2
acts_upstream_of
ISO
(PMID:17389358)
RGD
PMID:17389358
NCBI chr10:46,451,578...46,530,462
Ensembl chr10:46,454,030...46,530,407
G
Zeb2
zinc finger E-box binding homeobox 2
acts_upstream_of_or_within
ISO
MGI:2387499|MGI:2668659 (PMID:25741725)
RGD
PMID:25741725
NCBI chr 3:29,214,581...29,344,890
Ensembl chr 3:29,218,301...29,345,157
G
App
amyloid beta precursor protein
involved_in acts_upstream_of_or_within
ISS ISO IEA
GO_REF:0000024 MGI:88047 (PMID:15689559) GO_REF:0000107
UniProt RGD Ensembl
PMID:15689559
GO_REF:0000024 GO_REF:0000107
NCBI chr11:24,019,774...24,236,584
Ensembl chr11:24,019,778...24,236,561
G
Cobl
cordon-bleu WH2 repeat protein
involved_in
IEA ISO
GO_REF:0000107 (PMID:17956734)
Ensembl RGD
PMID:17956734
GO_REF:0000107
NCBI chr14:86,828,137...87,060,682
Ensembl chr14:86,828,139...87,060,800
G
Spart
spartin
acts_upstream_of
ISO
MGI:1919205|MGI:5430946 (PMID:22619377)
RGD
PMID:22619377
NCBI chr 2:139,292,630...139,319,248
Ensembl chr 2:139,292,355...139,319,248
G
Adam17
ADAM metallopeptidase domain 17
involved_in
ISO IEA
(PMID:36476876) GO_REF:0000107
RGD Ensembl
PMID:36476876
GO_REF:0000107
NCBI chr 6:40,872,936...40,920,700
Ensembl chr 6:40,872,856...40,920,639
G
Dag1
dystroglycan 1
acts_upstream_of_or_within
ISO
MGI:1934902 (PMID:23217742)
RGD
PMID:23217742
NCBI chr 8:108,890,926...108,955,611
Ensembl chr 8:108,890,929...108,952,325
G
Ephb2
Eph receptor B2
involved_in
ISO
(PMID:8689685)
RGD
PMID:8689685
NCBI chr 5:148,889,574...149,077,027
Ensembl chr 5:148,897,246...149,077,059
G
Fzd3
frizzled class receptor 3
acts_upstream_of_or_within
ISO
MGI:2388632 (PMID:14671310)
RGD
PMID:14671310
NCBI chr15:39,421,366...39,488,369
Ensembl chr15:39,421,355...39,488,369
G
Gdnf
glial cell derived neurotrophic factor
involved_in
IEA ISO
GO_REF:0000107 UniProtKB:P13595 (PMID:22998873)
Ensembl RGD
PMID:22998873
GO_REF:0000107
NCBI chr 2:56,894,022...56,919,935
Ensembl chr 2:56,895,010...56,917,209
G
Ncam1
neural cell adhesion molecule 1
involved_in
ISO
UniProtKB:P48540 (PMID:22998873)
RGD
PMID:22998873
NCBI chr 8:49,865,629...50,165,687
Ensembl chr 8:49,865,633...50,166,014
G
Nell2
neural EGFL like 2
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:32198364) GO_REF:0000107
UniProt RGD Ensembl
PMID:32198364
GO_REF:0000024 GO_REF:0000107
NCBI chr 7:126,343,089...126,662,903
Ensembl chr 7:126,198,851...126,733,503
G
Nfib
nuclear factor I/B
involved_in
ISS ISO
GO_REF:0000024 (PMID:19961580)
UniProt RGD
PMID:19961580
GO_REF:0000024
NCBI chr 5:96,759,208...96,974,001
Ensembl chr 5:96,764,653...96,975,479
G
Nrp1
neuropilin 1
involved_in
ISO
(PMID:21658587)
RGD
PMID:21658587
NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
G
Ptch1
patched 1
IMP
RGD
PMID:19946319
RGD:12879429
NCBI chr17:1,542,705...1,607,730
Ensembl chr17:1,542,877...1,607,333
G
Robo3
roundabout guidance receptor 3
involved_in
ISO IEA
(PMID:18466743) GO_REF:0000107
RGD Ensembl
PMID:18466743
GO_REF:0000107
NCBI chr 8:37,133,542...37,151,674
Ensembl chr 8:37,133,916...37,151,315
G
Ryk
receptor-like tyrosine kinase
acts_upstream_of_or_within
ISO
MGI:2667542 (PMID:16723543)
RGD
PMID:16723543
NCBI chr 8:103,419,338...103,492,083
Ensembl chr 8:103,419,275...103,491,698
G
Shh
sonic hedgehog signaling molecule
IMP
RGD
PMID:19946319
RGD:12879429
NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
G
Smo
smoothened, frizzled class receptor
involved_in
IMP IBA
GO_REF:0000033
GO_Central RGD
PMID:19946319
GO_REF:0000033, RGD:12879429
NCBI chr 4:58,343,626...58,373,823
Ensembl chr 4:58,343,529...58,373,829
G
Vegfa
vascular endothelial growth factor A
involved_in NOT|involved_in
ISO
(PMID:21658587)
RGD
PMID:21658587
NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641
G
Bhlhe22
basic helix-loop-helix family, member e22
acts_upstream_of_or_within
ISO
MGI:2684610|MGI:4440742|MGI:4440744 (PMID:22284184)
RGD
PMID:22284184
NCBI chr 2:100,486,400...100,489,510
Ensembl chr 2:100,486,400...100,489,510
G
Grcc10
gene rich cluster, C10 gene
involved_in
ISO
(PMID:23453665), (PMID:23453666), (PMID:23633300), (PMID:24798461)
RGD
PMID:23453665 PMID:23453666 PMID:23633300 PMID:24798461
NCBI chr 4:157,551,276...157,552,924
G
Nin
ninein
acts_upstream_of_or_within
ISO
MGI:1344407 (PMID:25741725)
RGD
PMID:25741725
NCBI chr 6:88,525,405...88,627,710
Ensembl chr 6:88,525,742...88,627,639
G
Pafah1b1
platelet-activating factor acetylhydrolase 1b, regulatory subunit 1
involved_in
ISO
(PMID:9063735)
RGD
PMID:9063735
NCBI chr10:59,533,042...59,591,808
Ensembl chr10:59,534,117...59,591,808
G
Prdm8
PR/SET domain 8
acts_upstream_of_or_within
ISO
MGI:5315763 (PMID:22284184)
RGD
PMID:22284184
NCBI chr14:11,403,202...11,424,059
Ensembl chr14:11,404,407...11,410,993
G
Szt2
SZT2 subunit of KICSTOR complex
involved_in
ISO
(PMID:23932106)
RGD
PMID:23932106
NCBI chr 5:131,897,250...131,943,953
Ensembl chr 5:131,897,275...131,943,904
G
Tsku
tsukushi, small leucine rich proteoglycan
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:4867728 (PMID:21055390)
Ensembl RGD
PMID:21055390
GO_REF:0000107
NCBI chr 1:152,660,259...152,671,682
Ensembl chr 1:152,656,693...152,672,588
G
Zeb2
zinc finger E-box binding homeobox 2
acts_upstream_of_or_within
ISO
MGI:2387499|MGI:2668659 (PMID:25741725)
RGD
PMID:25741725
NCBI chr 3:29,214,581...29,344,890
Ensembl chr 3:29,218,301...29,345,157
G
Scn1b
sodium voltage-gated channel beta subunit 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3043422 (PMID:18354028)
Ensembl RGD
PMID:18354028
GO_REF:0000107
NCBI chr 1:86,353,917...86,363,820
Ensembl chr 1:86,353,917...86,363,739
G
Slit2
slit guidance ligand 2
involved_in
ISO IEA
(PMID:10975526) GO_REF:0000107
RGD Ensembl
PMID:10975526
GO_REF:0000107
NCBI chr14:62,616,337...62,955,934
Ensembl chr14:62,617,067...62,955,948
G
Bhlhe22
basic helix-loop-helix family, member e22
acts_upstream_of_or_within
ISO
MGI:2684610|MGI:4440742|MGI:4440744|MGI:99217 (PMID:22284184)
RGD
PMID:22284184
NCBI chr 2:100,486,400...100,489,510
Ensembl chr 2:100,486,400...100,489,510
G
Cdh11
cadherin 11
acts_upstream_of_or_within
ISO
MGI:1930001 (PMID:22284184)
RGD
PMID:22284184
NCBI chr19:2,148,447...2,305,754
Ensembl chr19:2,148,458...2,304,272
G
Epha4
Eph receptor A4
involved_in
ISS ISO
GO_REF:0000024 (PMID:9789074)
UniProt RGD
PMID:9789074
GO_REF:0000024
NCBI chr 9:78,815,460...78,958,139
Ensembl chr 9:78,815,460...78,958,139
G
Fbxo45
F-box protein 45
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3849742 (PMID:19398581)
Ensembl RGD
PMID:19398581
GO_REF:0000107
NCBI chr11:68,551,430...68,567,053
Ensembl chr11:68,551,122...68,566,800
G
Nin
ninein
acts_upstream_of_or_within
ISO
MGI:1344407 (PMID:25741725)
RGD
PMID:25741725
NCBI chr 6:88,525,405...88,627,710
Ensembl chr 6:88,525,742...88,627,639
G
Prdm8
PR/SET domain 8
acts_upstream_of_or_within
ISO
MGI:5315763 (PMID:22284184)
RGD
PMID:22284184
NCBI chr14:11,403,202...11,424,059
Ensembl chr14:11,404,407...11,410,993
G
Spg11
SPG11 vesicle trafficking associated, spatacsin
acts_upstream_of_or_within
ISO
MGI:6451766 (PMID:28237315)
RGD
PMID:28237315
NCBI chr 3:109,007,658...109,072,904
Ensembl chr 3:109,008,135...109,072,911
G
Zeb2
zinc finger E-box binding homeobox 2
acts_upstream_of_or_within
ISO
MGI:2387499|MGI:2668659 (PMID:25741725)
RGD
PMID:25741725
NCBI chr 3:29,214,581...29,344,890
Ensembl chr 3:29,218,301...29,345,157
G
Celsr3
cadherin, EGF LAG seven-pass G-type receptor 3
involved_in
ISO
(PMID:21106844)
RGD
PMID:21106844
NCBI chr 8:109,530,597...109,558,360
Ensembl chr 8:109,530,641...109,558,354
G
Fzd3
frizzled class receptor 3
involved_in
ISO
(PMID:21106844)
RGD
PMID:21106844
NCBI chr15:39,421,366...39,488,369
Ensembl chr15:39,421,355...39,488,369
G
Vangl2
VANGL planar cell polarity protein 2
involved_in
ISO
(PMID:21106844)
RGD
PMID:21106844
NCBI chr13:84,462,731...84,489,404
Ensembl chr13:84,465,527...84,489,378
G
Lhx9
LIM homeobox 9
involved_in
ISS
GO_REF:0000024
UniProt
GO_REF:0000024
NCBI chr13:50,389,052...50,409,947
Ensembl chr13:50,389,738...50,410,806
G
Dcc
DCC netrin 1 receptor
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1934924 (PMID:17898206)
Ensembl RGD
PMID:17898206
GO_REF:0000107
NCBI chr18:64,868,987...65,972,783
Ensembl chr18:64,873,898...65,972,740
G
Fgf8
fibroblast growth factor 8
IMP
projection of trochlear axons through the isthmic organizer
RGD
PMID:12403710
RGD:2289355
NCBI chr 1:244,584,477...244,590,578
Ensembl chr 1:244,584,652...244,590,359
G
Slit1
slit guidance ligand 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1315205 (PMID:11804571)
Ensembl RGD
PMID:11804571
GO_REF:0000107
NCBI chr 1:240,409,559...240,558,127
Ensembl chr 1:240,409,561...240,558,127
G
Slit2
slit guidance ligand 2
acts_upstream_of_or_within
ISO
MGI:1315203|MGI:2179460 (PMID:11804571)
RGD
PMID:11804571
NCBI chr14:62,616,337...62,955,934
Ensembl chr14:62,617,067...62,955,948
G
Phox2b
paired-like homeobox 2b
acts_upstream_of_or_within
ISO
MGI:1926861 (PMID:12885554)
RGD
PMID:12885554
NCBI chr14:41,066,012...41,069,202
Ensembl chr14:41,066,264...41,068,978
G
Epha3
Eph receptor A3
involved_in
ISS ISO
GO_REF:0000024 (PMID:18403711)
UniProt RGD
PMID:18403711
GO_REF:0000024
NCBI chr11:1,138,485...1,474,102
Ensembl chr11:1,140,985...1,473,900
G
Epha4
Eph receptor A4
involved_in
ISS ISO
GO_REF:0000024 (PMID:18403711)
UniProt RGD
PMID:18403711
GO_REF:0000024
NCBI chr 9:78,815,460...78,958,139
Ensembl chr 9:78,815,460...78,958,139
G
Epha3
Eph receptor A3
involved_in
ISS ISO
GO_REF:0000024 (PMID:21791286)
UniProt RGD
PMID:21791286
GO_REF:0000024
NCBI chr11:1,138,485...1,474,102
Ensembl chr11:1,140,985...1,473,900
G
Epha4
Eph receptor A4
involved_in
ISO
(PMID:18403711)
RGD
PMID:18403711
NCBI chr 9:78,815,460...78,958,139
Ensembl chr 9:78,815,460...78,958,139
G
Megf8
multiple EGF-like-domains 8
involved_in
IEA ISO ISS
GO_REF:0000107 (PMID:24052814) GO_REF:0000024
Ensembl RGD CAFA
PMID:24052814
GO_REF:0000024 GO_REF:0000107
NCBI chr 1:80,902,236...80,951,614
Ensembl chr 1:80,902,574...80,951,613
G
Dlx5
distal-less homeobox 5
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2180475 (PMID:25937343)
Ensembl RGD
PMID:25937343
GO_REF:0000107
NCBI chr 4:34,999,139...35,003,504
Ensembl chr 4:34,999,139...35,003,407
G
Mir200a
microRNA 200a
acts_upstream_of_or_within
ISO
(PMID:25937343)
RGD
PMID:25937343
NCBI chr 5:166,648,494...166,648,582
G
Mir200b
microRNA 200b
acts_upstream_of_or_within
ISO
(PMID:25937343)
RGD
PMID:25937343
NCBI chr 5:166,649,272...166,649,366
Ensembl chr 5:166,649,272...166,649,366
G
Mir200c
microRNA 200c
acts_upstream_of_or_within
ISO
(PMID:25937343)
RGD
PMID:25937343
NCBI chr 4:157,523,679...157,523,747
G
Mir9-3
microRNA 9-3
acts_upstream_of_or_within
ISO
(PMID:25937343)
RGD
PMID:25937343
NCBI chr 1:133,440,049...133,440,138
G
Alcam
activated leukocyte cell adhesion molecule
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3056579 (PMID:15345243)
Ensembl RGD
PMID:15345243
GO_REF:0000107
NCBI chr11:48,336,123...48,536,296
Ensembl chr11:48,336,169...48,537,954
G
Ark2c
arkadia C-terminal like ring finger ubiquitin ligase 2C
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 MGI:5516581 (PMID:23610558)
GO_Central RGD
PMID:23610558
GO_REF:0000033
NCBI chr18:70,984,566...71,100,836
Ensembl chr18:70,989,731...71,100,836
G
Cdk5
cyclin-dependent kinase 5
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1861809 (PMID:16203963)
Ensembl RGD
PMID:16203963
GO_REF:0000107
NCBI chr 4:10,754,682...10,760,110
Ensembl chr 4:10,754,687...10,760,112
G
Chn1
chimerin 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:17785183)
UniProt RGD
PMID:17785183
GO_REF:0000024
NCBI chr 3:58,509,822...58,676,462
Ensembl chr 3:58,510,536...58,676,490
G
Cxcl12
C-X-C motif chemokine ligand 12
acts_upstream_of_or_within
ISO
MGI:1934384 (PMID:16129397)
RGD
PMID:16129397
NCBI chr 4:150,388,326...150,401,173
Ensembl chr 4:150,388,325...150,401,168
G
Cxcr4
C-X-C motif chemokine receptor 4
acts_upstream_of_or_within
ISO
MGI:1934442|MGI:3777572 (PMID:16129397), (PMID:18031680)
RGD
PMID:16129397 PMID:18031680
NCBI chr13:40,077,976...40,081,883
Ensembl chr13:40,077,976...40,081,883
G
Egr2
early growth response 2
acts_upstream_of_or_within
ISO
MGI:96170 (PMID:9806922)
RGD
PMID:9806922
NCBI chr20:21,051,270...21,056,322
Ensembl chr20:21,051,277...21,055,562
G
Epha3
Eph receptor A3
NOT|involved_in
ISO
(PMID:17046737)
RGD
PMID:17046737
NCBI chr11:1,138,485...1,474,102
Ensembl chr11:1,140,985...1,473,900
G
Epha4
Eph receptor A4
involved_in
ISS ISO
GO_REF:0000024 (PMID:17785183)
UniProt RGD
PMID:17785183
GO_REF:0000024
NCBI chr 9:78,815,460...78,958,139
Ensembl chr 9:78,815,460...78,958,139
G
Erbb2
erb-b2 receptor tyrosine kinase 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1929070 (PMID:10655525)
Ensembl RGD
PMID:10655525
GO_REF:0000107
NCBI chr10:83,411,197...83,435,078
Ensembl chr10:83,411,313...83,435,078
G
Etv4
ETS variant transcription factor 4
acts_upstream_of_or_within
ISO
MGI:2387770 (PMID:12372283)
RGD
PMID:12372283
NCBI chr10:86,706,749...86,721,974
Ensembl chr10:86,706,749...86,721,974
G
Fgf8
fibroblast growth factor 8
IMP
projection of trochlear axons through the isthmic organizer
RGD
PMID:12403710
RGD:2289355
NCBI chr 1:244,584,477...244,590,578
Ensembl chr 1:244,584,652...244,590,359
G
Foxp1
forkhead box P1
involved_in
ISO
(PMID:20711475)
RGD
PMID:20711475
NCBI chr 4:131,559,599...132,155,092
Ensembl chr 4:131,564,756...132,112,258
G
Hoxa1
homeobox A1
acts_upstream_of_or_within
ISO
MGI:95296 (PMID:9806922)
RGD
PMID:9806922
NCBI chr 4:81,255,814...81,258,587
Ensembl chr 4:81,255,883...81,258,504
G
Hoxa2
homeobox A2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1857626 (PMID:9367425)
Ensembl RGD
PMID:9367425
GO_REF:0000107
NCBI chr 4:81,262,668...81,266,970
Ensembl chr 4:81,262,768...81,265,044
G
Kif5c
kinesin family member 5C
acts_upstream_of_or_within
ISO
MGI:1888955 (PMID:10964943)
RGD
PMID:10964943
NCBI chr 3:34,032,082...34,185,597
Ensembl chr 3:34,032,105...34,182,413
G
Lhx1
LIM homeobox 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:20711475)
UniProt RGD
PMID:20711475
GO_REF:0000024
NCBI chr10:69,396,829...69,403,617
Ensembl chr10:69,396,829...69,403,617
G
Lhx3
LIM homeobox 3
acts_upstream_of_or_within
ISO
MGI:101776 (PMID:9865699)
RGD
PMID:9865699
NCBI chr 3:9,026,432...9,035,122
Ensembl chr 3:9,027,425...9,034,480
G
Lhx4
LIM homeobox 4
acts_upstream_of_or_within
ISO
MGI:102673 (PMID:9865699)
RGD
PMID:9865699
NCBI chr13:67,877,109...67,917,219
Ensembl chr13:67,877,109...67,927,003
G
Lmo4
LIM domain only 4
involved_in
ISO
UniProtKB:Q9QZW9 (PMID:18539116)
RGD
PMID:18539116
NCBI chr 2:233,264,180...233,280,881
Ensembl chr 2:233,264,182...233,280,880
G
Mnx1
motor neuron and pancreas homeobox 1
acts_upstream_of_or_within
ISO
MGI:2182358|MGI:2182361|MGI:2182363 (PMID:10482234)
RGD
PMID:10482234
NCBI chr 4:5,866,506...5,871,465
Ensembl chr 4:5,866,506...5,871,465
G
Mycbp2
MYC binding protein 2
acts_upstream_of_or_within
ISO
MGI:3777464|MGI:3777465 (PMID:18031680)
RGD
PMID:18031680
NCBI chr15:79,937,354...80,175,432
Ensembl chr15:79,937,354...80,175,498
G
Nog
noggin
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1862000 (PMID:12435358)
Ensembl RGD
PMID:12435358
GO_REF:0000107
NCBI chr10:74,128,712...74,130,339
Ensembl chr10:74,128,712...74,130,339
G
Nrp1
neuropilin 1
involved_in
ISO
(PMID:18804103)
RGD
PMID:18804103
NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
G
Ntn1
netrin 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr10:52,899,933...53,098,591
Ensembl chr10:52,899,934...53,085,326
G
Ntn3
netrin 3
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr10:13,236,905...13,240,001
Ensembl chr10:13,236,905...13,240,001
G
Plxna3
plexin A3
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr X:152,115,699...152,131,608
Ensembl chr X:152,115,819...152,131,603
G
Plxna4
plexin A4
involved_in
ISO
(PMID:18804103)
RGD
PMID:18804103
NCBI chr 4:60,720,246...61,162,206
Ensembl chr 4:60,720,255...61,162,206
G
Rac1
Rac family small GTPase 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr12:11,037,028...11,057,251
Ensembl chr12:11,036,698...11,057,251
G
Rac3
Rac family small GTPase 3
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr10:106,002,808...106,005,243
Ensembl chr10:105,993,087...106,005,260
G
Sema3a
semaphorin 3A
involved_in
IBA ISO
GO_REF:0000033 (PMID:18804103)
GO_Central RGD
PMID:18804103
GO_REF:0000033
NCBI chr 4:21,282,398...21,754,834
Ensembl chr 4:21,287,982...21,494,432
G
Slit1
slit guidance ligand 1
involved_in
ISO IEA
(PMID:16162649) GO_REF:0000107
RGD Ensembl
PMID:16162649
GO_REF:0000107
NCBI chr 1:240,409,559...240,558,127
Ensembl chr 1:240,409,561...240,558,127
G
Slit2
slit guidance ligand 2
involved_in
ISO IEA
(PMID:10102268) GO_REF:0000107
RGD Ensembl
PMID:10102268
GO_REF:0000107
NCBI chr14:62,616,337...62,955,934
Ensembl chr14:62,617,067...62,955,948
G
Actr3
actin related protein 3
IMP
RGD
PMID:19846719
RGD:11530054
NCBI chr13:36,800,739...36,843,837
Ensembl chr13:36,800,093...36,844,124
G
Arhgap4
Rho GTPase activating protein 4
IMP
RGD
PMID:17804252
RGD:2313143
NCBI chr X:151,636,071...151,651,528
Ensembl chr X:151,632,454...151,651,128
G
Ccr5
C-C motif chemokine receptor 5
IMP
RGD
PMID:16537566
RGD:4890441
NCBI chr 8:123,752,423...123,757,538
Ensembl chr 8:123,752,325...123,759,260
G
Cdh1
cadherin 1
IMP
RGD
PMID:23226367
RGD:151665335
NCBI chr19:34,492,371...34,561,775
Ensembl chr19:34,492,371...34,561,775
G
Cdk5
cyclin-dependent kinase 5
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1197518 (PMID:22573681)
Ensembl RGD
PMID:22573681
GO_REF:0000107
NCBI chr 4:10,754,682...10,760,110
Ensembl chr 4:10,754,687...10,760,112
G
Cdkl3
cyclin-dependent kinase-like 3
acts_upstream_of_or_within involved_in
IMP ISO IBA
PMID:20347982 (PMID:20347982) GO_REF:0000033
RGD GO_Central
PMID:20347982 PMID:20347982
GO_REF:0000033, RGD:8693354
NCBI chr10:36,263,212...36,349,268
Ensembl chr10:36,266,977...36,349,268
G
Dip2b
disco-interacting protein 2 homolog B
involved_in
ISO
(PMID:32153366)
RGD
PMID:32153366
NCBI chr 7:131,174,575...131,350,417
Ensembl chr 7:131,174,567...131,349,092
G
Draxin
dorsal inhibitory axon guidance protein
acts_upstream_of_or_within
ISO
(PMID:20621059)
RGD
PMID:20621059
NCBI chr 5:158,530,149...158,563,457
Ensembl chr 5:158,530,342...158,564,483
G
Fstl4
follistatin-like 4
NOT|acts_upstream_of_or_within
ISO
(PMID:24573299)
RGD
PMID:24573299
NCBI chr10:36,911,422...37,344,545
Ensembl chr10:36,911,420...37,338,588
G
Ifrd1
interferon-related developmental regulator 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:97321 (PMID:18052984)
Ensembl RGD
PMID:18052984
GO_REF:0000107
NCBI chr 6:57,269,395...57,317,833
Ensembl chr 6:57,269,384...57,288,990
G
Kiaa0319
KIAA0319 homolog
acts_upstream_of_or_within
ISO
(PMID:28334068)
RGD
PMID:28334068
NCBI chr17:40,162,512...40,226,666
Ensembl chr17:40,165,084...40,225,653
G
Mag
myelin-associated glycoprotein
involved_in
IMP
PMID:9298990
UniProt
PMID:9298990
RGD:12050149
NCBI chr 1:86,148,227...86,163,726
Ensembl chr 1:86,148,228...86,163,656
G
Map2
microtubule-associated protein 2
involved_in
IMP ISO
PMID:28426968 (PMID:28426968)
RGD
PMID:28426968 PMID:28426968
RGD:13514087
NCBI chr 9:67,723,422...67,981,886
Ensembl chr 9:67,723,371...67,979,809
G
Mt3
metallothionein 3
involved_in
ISS ISO
GO_REF:0000024 (PMID:16601975), (PMID:17712581)
UniProt RGD
PMID:16601975 PMID:17712581
GO_REF:0000024
NCBI chr19:10,848,754...10,850,158
Ensembl chr19:10,848,755...10,850,158
G
Nrp1
neuropilin 1
acts_upstream_of_or_within
ISO
MGI:107558 (PMID:12852851)
RGD
PMID:12852851
NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
G
Ntn1
netrin 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:10704383)
Ensembl RGD
PMID:10704383
GO_REF:0000107
NCBI chr10:52,899,933...53,098,591
Ensembl chr10:52,899,934...53,085,326
G
Ptprs
protein tyrosine phosphatase, receptor type, S
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:19780196) GO_REF:0000107
UniProt RGD Ensembl
PMID:19780196
GO_REF:0000024 GO_REF:0000107
NCBI chr 9:1,245,408...1,307,015
Ensembl chr 9:1,245,410...1,306,947
G
Rnf6
ring finger protein 6
acts_upstream_of_or_within
ISO
MGI:104572 (PMID:16204183)
RGD
PMID:16204183
NCBI chr12:8,816,797...8,826,870
Ensembl chr12:8,816,833...8,826,847
G
Rtn4
reticulon 4
involved_in
ISS ISO IEA IDA
PMID:10667797 (PMID:20573699) GO_REF:0000107 (PMID:10667797)
RGD Ensembl
PMID:10667797 PMID:20573699 PMID:10667797 PMID:20573699
GO_REF:0000107, RGD:8553459 , RGD:8554113
NCBI chr14:103,450,074...103,497,687
Ensembl chr14:103,449,930...103,497,686
G
Rtn4r
reticulon 4 receptor
involved_in
ISS ISO
GO_REF:0000024 (PMID:22923615)
UniProt RGD
PMID:22923615
GO_REF:0000024
NCBI chr11:82,844,309...82,869,251
Ensembl chr11:82,844,309...82,869,466
G
Sema3a
semaphorin 3A
acts_upstream_of_or_within
IDA ISO
MGI:106206 (PMID:12852851)
RGD
PMID:12852851 PMID:12077190
RGD:628318
NCBI chr 4:21,282,398...21,754,834
Ensembl chr 4:21,287,982...21,494,432
G
Sema3g
semaphorin 3G
involved_in
ISO
(PMID:16098142)
RGD
PMID:16098142
NCBI chr16:6,413,589...6,425,221
Ensembl chr16:6,413,589...6,425,221
G
Sema4f
ssemaphorin 4F
acts_upstream_of_or_within
IDA
PMID:10051670
MGI
PMID:10051670
RGD:69991
NCBI chr 4:115,411,411...115,437,721
Ensembl chr 4:115,411,417...115,437,721
G
Sema6c
semaphorin 6C
involved_in
ISO
(PMID:12110693)
RGD
PMID:12110693
NCBI chr 2:182,733,635...182,750,066
Ensembl chr 2:182,737,474...182,746,856
G
Sema6d
semaphorin 6D
involved_in
ISO
(PMID:12110693)
RGD
PMID:12110693
NCBI chr 3:111,883,415...111,941,100
Ensembl chr 3:111,883,872...111,941,094
G
Slit2
slit guidance ligand 2
acts_upstream_of_or_within
ISO
(PMID:12879062)
RGD
PMID:12879062
NCBI chr14:62,616,337...62,955,934
Ensembl chr14:62,617,067...62,955,948
G
Tnr
tenascin R
acts_upstream_of_or_within
ISO
(PMID:16831557)
RGD
PMID:16831557
NCBI chr13:71,751,714...72,172,731
Ensembl chr13:72,091,585...72,167,641
G
Trim46
tripartite motif-containing 46
involved_in
IMP
PMID:28426968
ARUK-UCL
PMID:28426968
RGD:13514087
NCBI chr 2:174,641,494...174,654,237
Ensembl chr 2:174,641,496...174,654,141
G
Ttc3
tetratricopeptide repeat domain 3
involved_in
ISO
(PMID:17488780)
RGD
PMID:17488780
NCBI chr11:33,689,119...33,788,976
Ensembl chr11:33,688,952...33,788,975
G
Hdac6
histone deacetylase 6
IMP
RGD
PMID:19884510
RGD:9681717
NCBI chr X:14,550,645...14,572,445
Ensembl chr X:14,551,044...14,572,441
G
Nrp1
neuropilin 1
acts_upstream_of_or_within
IMP ISO
(PMID:9753685)
RGD
PMID:9753685 PMID:9288754
RGD:633436
NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
G
Plxna3
plexin A3
acts_upstream_of_or_within
ISO
MGI:107558|MGI:1096347 (PMID:11683995)
RGD
PMID:11683995
NCBI chr X:152,115,699...152,131,608
Ensembl chr X:152,115,819...152,131,603
G
Ryk
receptor-like tyrosine kinase
acts_upstream_of_or_within
ISO
MGI:98958 (PMID:16723543)
RGD
PMID:16723543
NCBI chr 8:103,419,338...103,492,083
Ensembl chr 8:103,419,275...103,491,698
G
Sema3a
semaphorin 3A
acts_upstream_of_or_within
ISO
MGI:104518|MGI:107683|MGI:96721 (PMID:11683995), (PMID:18550718), (PMID:7748561), (PMID:9753685)
RGD
PMID:7748561 PMID:9753685 PMID:11683995 PMID:18550718
NCBI chr 4:21,282,398...21,754,834
Ensembl chr 4:21,287,982...21,494,432
G
Sema3f
semaphorin 3F
acts_upstream_of_or_within
ISO
MGI:107683 (PMID:11683995), (PMID:9753685)
RGD
PMID:9753685 PMID:11683995
NCBI chr 8:108,357,629...108,386,569
Ensembl chr 8:108,357,629...108,387,083
G
Sema5a
semaphorin 5A
involved_in
IMP
PMID:15603739
UniProt
PMID:15603739
RGD:8553809
NCBI chr 2:83,309,843...83,741,084
Ensembl chr 2:83,309,843...83,741,084
G
Slit1
slit guidance ligand 1
IDA
RGD
PMID:15632296
RGD:1358459
NCBI chr 1:240,409,559...240,558,127
Ensembl chr 1:240,409,561...240,558,127
G
Wnt3
Wnt family member 3
acts_upstream_of_or_within
ISO
(PMID:18716223)
RGD
PMID:18716223
NCBI chr10:88,680,198...88,724,170
Ensembl chr10:88,680,248...88,724,099
G
Wnt3a
Wnt family member 3A
acts_upstream_of_or_within
ISO
(PMID:18716223)
RGD
PMID:18716223
NCBI chr10:44,034,174...44,078,366
Ensembl chr10:44,034,194...44,078,324
G
Wnt5a
Wnt family member 5A
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:101766 (PMID:16723543)
Ensembl RGD
PMID:16723543
GO_REF:0000107
NCBI chr16:3,697,032...3,718,230
Ensembl chr16:3,697,032...3,718,234
G
Kiaa0319
KIAA0319 homolog
acts_upstream_of_or_within
ISO
(PMID:28334068) MGI:4362922 (PMID:28334068)
RGD
PMID:28334068
NCBI chr17:40,162,512...40,226,666
Ensembl chr17:40,165,084...40,225,653
G
Tnr
tenascin R
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2154583 (PMID:16870730)
Ensembl RGD
PMID:16870730
GO_REF:0000107
NCBI chr13:71,751,714...72,172,731
Ensembl chr13:72,091,585...72,167,641
G
Cers2
ceramide synthase 2
involved_in
IMP
PMID:22393241
BHF-UCL
PMID:22393241
RGD:11041067
NCBI chr 2:182,890,527...182,898,805
Ensembl chr 2:182,890,493...182,933,314
G
Epha4
Eph receptor A4
involved_in NOT
IMP ISO ISS
(PMID:15537875) GO_REF:0000024
RGD UniProt
PMID:15537875 PMID:17970742 PMID:17418490
GO_REF:0000024, RGD:5688750 , RGD:5688782
NCBI chr 9:78,815,460...78,958,139
Ensembl chr 9:78,815,460...78,958,139
G
Fignl2
fidgetin-like 2
involved_in
IMP
PMID:33872220
UniProt
PMID:33872220
RGD:401901234
NCBI chr 7:132,160,006...132,187,896
Ensembl chr 7:132,162,390...132,164,336
G
Inpp5f
inositol polyphosphate-5-phosphatase F
involved_in
ISO
(PMID:26203138)
RGD
PMID:26203138
NCBI chr 1:183,190,480...183,270,276
Ensembl chr 1:183,190,480...183,270,276
G
Kremen1
kringle containing transmembrane protein 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:24167472)
Ensembl RGD
PMID:24167472
GO_REF:0000107
NCBI chr14:80,081,870...80,147,489
Ensembl chr14:80,084,403...80,147,516
G
Lrig2
leucine-rich repeats and immunoglobulin-like domains 2
acts_upstream_of_or_within
ISO
(PMID:26651291)
RGD
PMID:26651291
NCBI chr 2:191,947,322...192,012,996
Ensembl chr 2:191,949,819...192,012,579
G
Neo1
neogenin 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:26651291)
Ensembl RGD
PMID:26651291
GO_REF:0000107
NCBI chr 8:59,273,860...59,426,486
Ensembl chr 8:59,275,569...59,430,348
G
Pten
phosphatase and tensin homolog
involved_in
ISO
(PMID:26203138)
RGD
PMID:26203138
NCBI chr 1:230,630,443...230,697,070
Ensembl chr 1:230,630,338...230,696,838
G
Ptprs
protein tyrosine phosphatase, receptor type, S
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:19780196), (PMID:22406547) GO_REF:0000107
UniProt RGD Ensembl
PMID:19780196 PMID:22406547
GO_REF:0000024 GO_REF:0000107
NCBI chr 9:1,245,408...1,307,015
Ensembl chr 9:1,245,410...1,306,947
G
Rgma
repulsive guidance molecule BMP co-receptor a
IMP
RGD
PMID:16585268
RGD:9850138
NCBI chr 1:127,128,934...127,172,918
Ensembl chr 1:127,128,934...127,172,918
G
Rtn4r
reticulon 4 receptor
involved_in
ISS ISO
GO_REF:0000024 (PMID:22406547)
UniProt RGD
PMID:22406547
GO_REF:0000024
NCBI chr11:82,844,309...82,869,251
Ensembl chr11:82,844,309...82,869,466
G
Rtn4rl1
reticulon 4 receptor-like 1
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:22406547) GO_REF:0000107
UniProt RGD Ensembl
PMID:22406547
GO_REF:0000024 GO_REF:0000107
NCBI chr10:60,043,246...60,116,977
Ensembl chr10:60,043,002...60,116,978
G
Xylt1
xylosyltransferase 1
IMP
RGD
PMID:18765417
RGD:2313145
NCBI chr 1:171,643,925...171,929,774
Ensembl chr 1:171,643,925...171,926,783
G
Dab1
DAB adaptor protein 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1861918|MGI:1891699 (PMID:21111240)
Ensembl RGD
PMID:21111240
GO_REF:0000107
NCBI chr 5:118,392,953...119,513,625
Ensembl chr 5:119,140,533...119,510,552
G
Efnb3
ephrin B3
involved_in
ISO
(PMID:12383247)
RGD
PMID:12383247
NCBI chr10:54,274,506...54,281,951
Ensembl chr10:54,274,506...54,280,471
G
Ephb2
Eph receptor B2
acts_upstream_of_or_within
ISO
(PMID:12971893)
RGD
PMID:12971893
NCBI chr 5:148,889,574...149,077,027
Ensembl chr 5:148,897,246...149,077,059
G
Gdi1
GDP dissociation inhibitor 1
involved_in
IDA
PMID:21856246
UniProt
PMID:21856246
RGD:8553614
NCBI chr X:152,087,611...152,094,274
Ensembl chr X:152,087,444...152,094,272
G
Lrp4
LDL receptor related protein 4
involved_in
ISS ISO
GO_REF:0000024 (PMID:22854782)
UniProt RGD
PMID:22854782
GO_REF:0000024
NCBI chr 3:77,429,600...77,483,593
Ensembl chr 3:77,429,798...77,483,593
G
Mbp
myelin basic protein
IMP
RGD
PMID:12210134
RGD:1358766
NCBI chr18:75,855,878...75,966,404
Ensembl chr18:75,855,878...75,966,404
G
Psen1
presenilin 1
acts_upstream_of_or_within
ISO
MGI:2149116 (PMID:15548218)
RGD
PMID:15548218
NCBI chr 6:103,323,052...103,375,088
Ensembl chr 6:103,323,120...103,371,650
G
Pten
phosphatase and tensin homolog
involved_in
ISO
(PMID:16675393)
RGD
PMID:16675393
NCBI chr 1:230,630,443...230,697,070
Ensembl chr 1:230,630,338...230,696,838
G
Ptk2
protein tyrosine kinase 2
acts_upstream_of_or_within
ISO
MGI:1857596 (PMID:15378065)
RGD
PMID:15378065
NCBI chr 7:105,126,725...105,331,848
Ensembl chr 7:105,126,728...105,331,783
G
Rtn4
reticulon 4
IDA IMP
RGD
PMID:10667796 PMID:18973596
RGD:628417 , RGD:2314943
NCBI chr14:103,450,074...103,497,687
Ensembl chr14:103,449,930...103,497,686
G
Rtn4r
reticulon 4 receptor
TAS
RGD
PMID:12037567
RGD:727379
NCBI chr11:82,844,309...82,869,251
Ensembl chr11:82,844,309...82,869,466
G
Rufy3
RUN and FYVE domain containing 3
involved_in
IDA
PMID:17439943
HGNC-UCL
PMID:17439943
RGD:8554472
NCBI chr14:19,431,530...19,506,476
Ensembl chr14:19,432,524...19,507,004
G
Syngap1
synaptic Ras GTPase activating protein 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:15014045)
Ensembl RGD
PMID:15014045
GO_REF:0000107
NCBI chr20:5,026,366...5,056,659
Ensembl chr20:5,026,364...5,056,672
G
Thy1
Thy-1 cell surface antigen
involved_in
IDA
PMID:15547945
UniProt
PMID:15547945
RGD:8554523
NCBI chr 8:44,389,495...44,394,688
Ensembl chr 8:44,389,513...44,394,659
G
Trak2
trafficking kinesin protein 2
IMP
RGD
PMID:23395375
RGD:13208834
NCBI chr 9:60,348,531...60,414,036
Ensembl chr 9:60,350,012...60,413,996
G
Tsc2
TSC complex subunit 2
IMP
RGD
PMID:18794346
RGD:11568688
NCBI chr10:13,621,135...13,655,773
Ensembl chr10:13,621,136...13,655,951
G
Bcl11a
BCL11 transcription factor A
involved_in
ISO
(PMID:19616629)
RGD
PMID:19616629
NCBI chr14:98,029,018...98,124,181
Ensembl chr14:98,030,461...98,124,180
G
Epha7
Eph receptor A7
involved_in
IEA ISO
GO_REF:0000107 (PMID:19036963)
Ensembl RGD
PMID:19036963
GO_REF:0000107
NCBI chr 5:42,975,353...43,128,703
Ensembl chr 5:42,975,405...43,127,112
G
Fgf13
fibroblast growth factor 13
involved_in
ISS ISO
GO_REF:0000024 (PMID:22726441)
UniProt RGD
PMID:22726441
GO_REF:0000024
NCBI chr X:137,276,498...137,800,056
Ensembl chr X:137,276,511...137,800,391
G
Fstl4
follistatin-like 4
acts_upstream_of_or_within
ISO
(PMID:24573299)
RGD
PMID:24573299
NCBI chr10:36,911,422...37,344,545
Ensembl chr10:36,911,420...37,338,588
G
Ifrd1
interferon-related developmental regulator 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:97321 (PMID:18052984)
Ensembl RGD
PMID:18052984
GO_REF:0000107
NCBI chr 6:57,269,395...57,317,833
Ensembl chr 6:57,269,384...57,288,990
G
Ptprs
protein tyrosine phosphatase, receptor type, S
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:22519304) GO_REF:0000107
UniProt RGD Ensembl
PMID:22519304
GO_REF:0000024 GO_REF:0000107
NCBI chr 9:1,245,408...1,307,015
Ensembl chr 9:1,245,410...1,306,947
G
Rgma
repulsive guidance molecule BMP co-receptor a
IMP
RGD
PMID:23744345
RGD:9850124
NCBI chr 1:127,128,934...127,172,918
Ensembl chr 1:127,128,934...127,172,918
G
Ulk1
unc-51 like autophagy activating kinase 1
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 (PMID:17389358)
GO_Central RGD
PMID:17389358
GO_REF:0000033
NCBI chr12:45,851,710...45,877,966
Ensembl chr12:45,851,710...45,877,966
G
Ulk2
unc-51 like autophagy activating kinase 2
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 (PMID:17389358)
GO_Central RGD
PMID:17389358
GO_REF:0000033
NCBI chr10:46,451,578...46,530,462
Ensembl chr10:46,454,030...46,530,407
G
Spart
spartin
acts_upstream_of_or_within
ISO
MGI:1919205|MGI:5430946 (PMID:22619377)
RGD
PMID:22619377
NCBI chr 2:139,292,630...139,319,248
Ensembl chr 2:139,292,355...139,319,248
G
Spp1
secreted phosphoprotein 1
IEP
RGD
PMID:15625076
RGD:1581125
NCBI chr14:5,308,885...5,315,120
Ensembl chr14:5,308,885...5,315,162
G
Rtca
RNA 3'-terminal phosphate cyclase
involved_in
ISO
(PMID:31919191)
RGD
PMID:31919191
NCBI chr 2:204,455,175...204,476,450
Ensembl chr 2:204,455,175...204,476,460
G
Slit2
slit guidance ligand 2
involved_in
ISO IEA
(PMID:17062560) GO_REF:0000107
RGD Ensembl
PMID:17062560
GO_REF:0000107
NCBI chr14:62,616,337...62,955,934
Ensembl chr14:62,617,067...62,955,948
G
Cers2
ceramide synthase 2
involved_in
IMP
PMID:22393241
BHF-UCL
PMID:22393241
RGD:11041067
NCBI chr 2:182,890,527...182,898,805
Ensembl chr 2:182,890,493...182,933,314
G
Bcl11b
BCL11 transcription factor B
acts_upstream_of_or_within
ISO
(PMID:21752992)
RGD
PMID:21752992
NCBI chr 6:126,834,531...126,927,720
Ensembl chr 6:126,834,531...126,928,224
G
Apoa1
apolipoprotein A1
IEP
RGD
PMID:2120218
RGD:2311210
NCBI chr 8:46,527,251...46,529,035
Ensembl chr 8:46,527,144...46,529,035
G
Apoa4
apolipoprotein A4
IEP
RGD
PMID:2120218
RGD:2311210
NCBI chr 8:46,539,083...46,541,464
Ensembl chr 8:46,539,082...46,541,469
G
Apod
apolipoprotein D
IEP
RGD
PMID:2120218
RGD:2311210
NCBI chr11:69,431,261...69,452,306
Ensembl chr11:69,431,260...69,452,305
G
Apoe
apolipoprotein E
IEP
RGD
PMID:2120218
RGD:2311210
NCBI chr 1:79,353,924...79,357,852
Ensembl chr 1:79,353,916...79,357,932
G
Calu
calumenin
IEP
sciatic nerve
RGD
PMID:15509515
RGD:2316214
NCBI chr 4:57,949,086...57,976,589
Ensembl chr 4:57,948,997...57,976,593
G
Chst3
carbohydrate sulfotransferase 3
IEP
RGD
PMID:16495484
RGD:1600854
NCBI chr20:28,114,386...28,152,046
Ensembl chr20:28,114,404...28,121,807
G
Map1b
microtubule-associated protein 1B
IEP
RGD
PMID:10924960
RGD:2304028
NCBI chr 2:30,817,261...30,910,458
Ensembl chr 2:30,817,261...30,910,317
G
Mmp2
matrix metallopeptidase 2
IDA
RGD
PMID:15026117
RGD:1582605
NCBI chr19:14,154,657...14,182,870
Ensembl chr19:14,154,657...14,182,870
G
Ncam1
neural cell adhesion molecule 1
IEP
RGD
PMID:15679872
RGD:2326091
NCBI chr 8:49,865,629...50,165,687
Ensembl chr 8:49,865,633...50,166,014
G
Nefl
neurofilament light chain
acts_upstream_of_or_within
ISO
MGI:2180095 (PMID:9398473)
RGD
PMID:9398473
NCBI chr15:42,301,920...42,305,793
Ensembl chr15:42,301,916...42,305,793
G
Tnc
tenascin C
acts_upstream_of_or_within involved_in
ISO
MGI:2388370 (PMID:16262655)
RGD
PMID:16262655
NCBI chr 5:77,375,851...77,460,712
Ensembl chr 5:77,375,851...77,460,624
G
Tspo
translocator protein
IEP
RGD
PMID:8977149
RGD:2317177
NCBI chr 7:114,720,188...114,730,450
Ensembl chr 7:114,720,188...114,730,450
G
Isl1
ISL LIM homeobox 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:18849985)
Ensembl RGD
PMID:18849985
GO_REF:0000107
NCBI chr 2:48,079,412...48,090,704
Ensembl chr 2:48,080,522...48,095,584
G
Nefh
neurofilament heavy chain
acts_upstream_of_or_within
ISO
MGI:2387787 (PMID:20633607)
RGD
PMID:20633607
NCBI chr14:79,830,362...79,840,347
Ensembl chr14:79,830,362...79,840,351
G
Pmp22
peripheral myelin protein 22
acts_upstream_of_or_within
ISO
MGI:1856217|MGI:1862010|MGI:1862011|MGI:2388488 (PMID:12359155), (PMID:25014022)
RGD
PMID:12359155 PMID:25014022
NCBI chr10:47,795,709...47,825,715
Ensembl chr10:47,795,709...47,825,714
G
Slc25a46
solute carrier family 25, member 46
acts_upstream_of_or_within
ISO
MGI:6358090 (PMID:28934388)
RGD
PMID:28934388
NCBI chr18:23,215,954...23,244,917
Ensembl chr18:23,215,962...23,244,314
G
Tbce
tubulin folding cofactor E
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1856997 (PMID:7472523)
Ensembl RGD
PMID:7472523
GO_REF:0000107
NCBI chr17:51,290,143...51,336,090
Ensembl chr17:51,290,202...51,336,089
G
Adcy10
adenylate cyclase 10
IMP
RGD
PMID:22649251
RGD:329347828
NCBI chr13:77,747,752...77,833,952
Ensembl chr13:77,768,468...77,833,951
G
Adnp
activity-dependent neuroprotector homeobox
IDA
RGD
PMID:19047645
RGD:2312772
NCBI chr 3:156,886,921...156,921,500
Ensembl chr 3:156,891,381...156,917,312
G
Anapc2
anaphase promoting complex subunit 2
IMP
RGD
PMID:19167333
RGD:2306262
NCBI chr 3:8,086,434...8,098,182
Ensembl chr 3:8,086,462...8,098,178
G
Apoe
apolipoprotein E
IDA
RGD
PMID:21040802
RGD:6904146
NCBI chr 1:79,353,924...79,357,852
Ensembl chr 1:79,353,916...79,357,932
G
Arhgap32
Rho GTPase activating protein 32
IMP
RGD
PMID:23226367
RGD:151665335
NCBI chr 8:30,421,269...30,681,653
Ensembl chr 8:30,421,515...30,678,454
G
Atp5mc1
ATP synthase membrane subunit c locus 1
IMP
RGD
PMID:22209705
RGD:13800744
NCBI chr10:81,024,056...81,026,780
Ensembl chr10:81,023,925...81,027,124 Ensembl chr10:81,023,925...81,027,124
G
Bdnf
brain-derived neurotrophic factor
NOT|acts_upstream_of_or_within
ISO
(PMID:24573299)
RGD
PMID:24573299
NCBI chr 3:96,165,042...96,215,621
Ensembl chr 3:96,165,042...96,215,615
G
Cdh4
cadherin 4
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:14586016)
Ensembl RGD
PMID:14586016
GO_REF:0000107
NCBI chr 3:166,525,092...167,003,380
Ensembl chr 3:166,525,099...167,003,371
G
Cdkl5
cyclin-dependent kinase-like 5
involved_in
IMP IBA
PMID:20861382 GO_REF:0000033
GO_Central
PMID:20861382
GO_REF:0000033, RGD:8554575
NCBI chr X:33,757,605...33,988,075
Ensembl chr X:33,821,257...33,986,582
G
Ctnnd2
catenin delta 2
IMP
RGD
PMID:32554807
RGD:407532699
NCBI chr 2:81,168,525...82,016,495
Ensembl chr 2:81,167,117...82,015,764
G
Cyfip1
cytoplasmic FMR1 interacting protein 1
IMP
RGD
PMID:16260607
RGD:11557987
NCBI chr 1:106,710,924...106,799,393
Ensembl chr 1:106,711,016...106,799,386
G
Dbn1
drebrin 1
involved_in
IMP IBA
GO_REF:0000033
GO_Central RGD
PMID:19222710
GO_REF:0000033, RGD:10395284
NCBI chr17:9,150,608...9,164,982
Ensembl chr17:9,150,659...9,164,984
G
Dbnl
drebrin-like
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr14:80,666,115...80,681,155
Ensembl chr14:80,666,124...80,681,155
G
Disc1
DISC1 scaffold protein
IMP
RGD
PMID:17202468
RGD:4107038
NCBI chr19:53,014,201...53,223,617
Ensembl chr19:53,014,616...53,219,778
G
Eif2b2
eukaryotic translation initiation factor 2B subunit beta
IMP
RGD
PMID:23616526
RGD:11041877
NCBI chr 6:104,866,926...104,873,351
Ensembl chr 6:104,866,753...104,873,353
G
Eif4g2
eukaryotic translation initiation factor 4, gamma 2
IMP
RGD
PMID:23616526
RGD:11041877
NCBI chr 1:165,181,433...165,193,583
Ensembl chr 1:165,181,434...165,193,588
G
Ep300
E1A binding protein p300
IMP
RGD
PMID:19339625
RGD:2308917
NCBI chr 7:113,108,476...113,178,529
Ensembl chr 7:113,106,247...113,136,088 Ensembl chr 7:113,106,247...113,136,088
G
Fn1
fibronectin 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:12879062)
Ensembl RGD
PMID:12879062
GO_REF:0000107
NCBI chr 9:73,196,044...73,264,695
Ensembl chr 9:73,196,044...73,264,678
G
Fxn
frataxin
IMP
RGD
PMID:18809400
RGD:2306797
NCBI chr 1:221,874,007...221,897,543
Ensembl chr 1:221,872,420...221,897,540
G
Gdi1
GDP dissociation inhibitor 1
IMP
RGD
PMID:9620768
RGD:13208823
NCBI chr X:152,087,611...152,094,274
Ensembl chr X:152,087,444...152,094,272
G
Golga4
golgin A4
involved_in
ISO
(PMID:22705394)
RGD
PMID:22705394
NCBI chr 8:118,208,200...118,285,003
G
Gsk3b
glycogen synthase kinase 3 beta
acts_upstream_of_or_within
ISO
MGI:106658|MGI:98927 (PMID:24623780)
RGD
PMID:24623780
NCBI chr11:62,498,997...62,648,665
Ensembl chr11:62,504,316...62,648,646
G
Ilk
integrin-linked kinase
IMP
shorter axons following Ilk inhibition or knock-down
RGD
PMID:17490631
RGD:2301744
NCBI chr 1:160,088,839...160,095,140
Ensembl chr 1:160,088,897...160,095,140
G
Islr2
immunoglobulin superfamily containing leucine-rich repeat 2
involved_in
IBA ISO
GO_REF:0000033 (PMID:19755105)
GO_Central RGD
PMID:19755105
GO_REF:0000033
NCBI chr 8:58,608,165...58,616,246
Ensembl chr 8:58,608,709...58,614,650
G
L1cam
L1 cell adhesion molecule
involved_in
IMP
PMID:18519736
UniProt
PMID:18519736
RGD:10054086
NCBI chr X:151,597,270...151,623,776
Ensembl chr X:151,597,277...151,623,857
G
Limk1
LIM domain kinase 1
involved_in acts_upstream_of_or_within
ISS ISO IEA
GO_REF:0000024 MGI:1921382 (PMID:16204183) GO_REF:0000107
UniProt RGD Ensembl
PMID:16204183
GO_REF:0000024 GO_REF:0000107
NCBI chr12:22,026,697...22,060,605
Ensembl chr12:22,026,672...22,060,606
G
Lrp1
LDL receptor related protein 1
IMP
RGD
PMID:21040802
RGD:6904146
NCBI chr 7:63,380,325...63,461,029
Ensembl chr 7:63,380,356...63,460,910
G
Macf1
microtubule-actin crosslinking factor 1
involved_in
ISO
(PMID:22705394)
RGD
PMID:22705394
NCBI chr 5:135,623,734...135,949,097
Ensembl chr 5:135,623,742...135,945,905
G
Map1b
microtubule-associated protein 1B
IMP
RGD
PMID:8838670
RGD:2304034
NCBI chr 2:30,817,261...30,910,458
Ensembl chr 2:30,817,261...30,910,317
G
Map3k13
mitogen-activated protein kinase kinase kinase 13
involved_in
ISO
(PMID:27511108)
RGD
PMID:27511108
NCBI chr11:79,094,087...79,235,181
Ensembl chr11:79,097,247...79,235,181
G
Mapt
microtubule-associated protein tau
involved_in
ISO ISS
(PMID:1389180) GO_REF:0000024
RGD UniProt
PMID:1389180
GO_REF:0000024
NCBI chr10:89,138,644...89,236,137
Ensembl chr10:89,138,627...89,236,129
G
Myo5b
myosin Vb
IMP
RGD
PMID:23770993
RGD:11533641
NCBI chr18:68,038,759...68,341,568
Ensembl chr18:68,038,759...68,338,745
G
Ndel1
nudE neurodevelopment protein 1-like 1
IMP
RGD
PMID:17202468
RGD:4107038
NCBI chr10:53,505,628...53,582,025
Ensembl chr10:53,516,491...53,570,907
G
Ngf
nerve growth factor
acts_upstream_of_or_within
ISO
(PMID:18052984), (PMID:8861722)
RGD
PMID:8861722 PMID:18052984
NCBI chr 2:189,901,058...189,954,452
Ensembl chr 2:189,901,058...189,954,452
G
Ntn1
netrin 1
involved_in acts_upstream_of_or_within
IDA ISO IEA
PMID:23453953 (PMID:10704383) GO_REF:0000107
RGD Ensembl
PMID:10704383 PMID:23453953
GO_REF:0000107, RGD:10054078
NCBI chr10:52,899,933...53,098,591
Ensembl chr10:52,899,934...53,085,326
G
Pafah1b1
platelet-activating factor acetylhydrolase 1b, regulatory subunit 1
IMP
RGD
PMID:17522326 PMID:17202468
RGD:4107033 , RGD:4107038
NCBI chr10:59,533,042...59,591,808
Ensembl chr10:59,534,117...59,591,808
G
Pak1
p21 (RAC1) activated kinase 1
IMP
RGD
PMID:23453953
RGD:10054078
NCBI chr 1:152,111,172...152,226,390
Ensembl chr 1:152,111,188...152,226,383
G
Pou4f2
POU class 4 homeobox 2
involved_in
ISS ISO
GO_REF:0000024 (PMID:10357904)
UniProt RGD
PMID:10357904
GO_REF:0000024
NCBI chr19:29,486,686...29,490,327
Ensembl chr19:29,486,686...29,490,327
G
Rpl4
ribosomal protein L4
IMP
RGD
PMID:10964612
RGD:11039443
NCBI chr 8:64,671,177...64,676,301
Ensembl chr 8:64,671,160...64,676,306
G
Rufy3
RUN and FYVE domain containing 3
involved_in
ISS ISO
GO_REF:0000024 (PMID:24720729)
UniProt RGD
PMID:24720729
GO_REF:0000024
NCBI chr14:19,431,530...19,506,476
Ensembl chr14:19,432,524...19,507,004
G
Sema7a
semaphorin 7A (John Milton Hagen blood group)
involved_in acts_upstream_of_or_within
ISO
(PMID:12879062)
RGD
PMID:12879062
NCBI chr 8:58,348,448...58,370,536
Ensembl chr 8:58,348,448...58,370,536
G
Shtn1
shootin 1
involved_in
IDA
PMID:23453953 PMID:18519736
UniProt
PMID:23453953 PMID:18519736
RGD:10054078 , RGD:10054086
NCBI chr 1:258,121,966...258,225,861
Ensembl chr 1:258,121,968...258,228,265
G
Smurf1
SMAD specific E3 ubiquitin protein ligase 1
IMP
RGD
PMID:23226367
RGD:151665335
NCBI chr12:9,635,009...9,726,520
Ensembl chr12:9,635,025...9,726,519
G
Srf
serum response factor
acts_upstream_of_or_within
ISO
MGI:1861437|MGI:3522206|MGI:98927 (PMID:24623780)
RGD
PMID:24623780
NCBI chr 9:14,426,453...14,435,734
Ensembl chr 9:14,426,472...14,435,733
G
Tnfrsf12a
TNF receptor superfamily member 12A
acts_upstream_of_or_within
ISO
(PMID:14573547)
RGD
PMID:14573547
NCBI chr10:12,707,077...12,709,071
Ensembl chr10:12,689,890...12,709,045
G
Trpc5
transient receptor potential cation channel, subfamily C, member 5
IMP
RGD
PMID:21984481
RGD:10043835
NCBI chr X:107,946,163...108,230,991
Ensembl chr X:107,939,131...108,230,991
G
Trpv2
transient receptor potential cation channel, subfamily V, member 2
involved_in
IEA ISO
GO_REF:0000107 (PMID:20357111)
Ensembl RGD
PMID:20357111
GO_REF:0000107
NCBI chr10:47,265,524...47,294,263
Ensembl chr10:47,272,931...47,294,260
G
Twf2
twinfilin actin-binding protein 2
involved_in
ISO
(PMID:17910947)
RGD
PMID:17910947
NCBI chr 8:106,845,253...106,858,298
Ensembl chr 8:106,845,253...106,858,298
G
Zfyve27
zinc finger FYVE-type containing 27
involved_in
ISS ISO IBA IEA
GO_REF:0000024 (PMID:24251978) GO_REF:0000033 GO_REF:0000107
UniProt RGD GO_Central Ensembl
PMID:24251978
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107
NCBI chr 1:240,979,831...241,003,193
Ensembl chr 1:240,979,842...241,003,193
G
Bmpr2
bone morphogenetic protein receptor type 2
involved_in
ISO
UniProtKB:O35607 (PMID:24052814)
RGD
PMID:24052814
NCBI chr 9:61,192,718...61,307,280
Ensembl chr 9:61,190,566...61,301,809
G
Cxcl12
C-X-C motif chemokine ligand 12
IMP
RGD
PMID:18701697
RGD:2306571
NCBI chr 4:150,388,326...150,401,173
Ensembl chr 4:150,388,325...150,401,168
G
Dscam
DS cell adhesion molecule
involved_in
ISO IBA IEA IMP
(PMID:18585357) GO_REF:0000033 GO_REF:0000107
RGD GO_Central Ensembl
PMID:18585357 PMID:18585357
GO_REF:0000033 GO_REF:0000107, RGD:8553710
NCBI chr11:35,921,924...36,507,100
Ensembl chr11:35,926,896...36,507,415
G
Megf8
multiple EGF-like-domains 8
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:24052814) GO_REF:0000107
CAFA RGD Ensembl
PMID:24052814
GO_REF:0000024 GO_REF:0000107
NCBI chr 1:80,902,236...80,951,614
Ensembl chr 1:80,902,574...80,951,613
G
Nrp1
neuropilin 1
involved_in
ISO
(PMID:21658587)
RGD
PMID:21658587
NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
G
Sema5a
semaphorin 5A
involved_in
IMP
PMID:15603739
UniProt
PMID:15603739
RGD:8553809
NCBI chr 2:83,309,843...83,741,084
Ensembl chr 2:83,309,843...83,741,084
G
Vegfa
vascular endothelial growth factor A
NOT|involved_in
ISO
(PMID:21658587)
RGD
PMID:21658587
NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641
G
Lrp1
LDL receptor related protein 1
IDA
RGD
PMID:23867460
RGD:13800520
NCBI chr 7:63,380,325...63,461,029
Ensembl chr 7:63,380,356...63,460,910
G
Ntrk3
neurotrophic receptor tyrosine kinase 3
acts_upstream_of_or_within
ISO
MGI:97380 (PMID:16142215)
RGD
PMID:16142215
NCBI chr 1:132,116,472...132,503,849
Ensembl chr 1:132,132,849...132,503,286
G
Robo3
roundabout guidance receptor 3
IMP
RGD
PMID:24936616
RGD:243048438
NCBI chr 8:37,133,542...37,151,674
Ensembl chr 8:37,133,916...37,151,315
G
Tubb2b
tubulin, beta 2B class IIb
involved_in
ISS ISO
GO_REF:0000024 (PMID:23001566)
UniProt RGD
PMID:23001566
GO_REF:0000024
NCBI chr17:30,747,734...30,750,781
Ensembl chr17:30,747,734...30,750,638
G
Bdnf
brain-derived neurotrophic factor
IMP
RGD
PMID:24873730
RGD:405878058
NCBI chr 3:96,165,042...96,215,621
Ensembl chr 3:96,165,042...96,215,615
G
Braf
B-Raf proto-oncogene, serine/threonine kinase
acts_upstream_of_or_within
ISO
(PMID:24733831)
RGD
PMID:24733831
NCBI chr 4:68,375,484...68,510,652
Ensembl chr 4:68,384,649...68,510,463
G
Cntf
ciliary neurotrophic factor
involved_in
IDA IBA
GO_REF:0000033
GO_Central RGD
PMID:15574731
GO_REF:0000033, RGD:1626128
NCBI chr 1:209,887,854...209,889,877
Ensembl chr 1:209,887,854...209,889,877
G
Fkbp1b
FKBP prolyl isomerase 1B
IDA
RGD
PMID:9512405
RGD:7205517
NCBI chr 6:27,832,128...27,850,600
Ensembl chr 6:27,838,802...27,848,653
G
Flna
filamin A
involved_in
ISO
(PMID:26157139)
RGD
PMID:26157139
NCBI chr X:152,007,758...152,034,266
Ensembl chr X:152,007,758...152,031,052
G
Grn
granulin precursor
involved_in
ISS ISO
GO_REF:0000024 (PMID:28453791)
UniProt RGD
PMID:28453791
GO_REF:0000024
NCBI chr10:87,387,672...87,393,777
Ensembl chr10:87,387,638...87,393,775
G
Igf1r
insulin-like growth factor 1 receptor
IMP
RGD
PMID:23349896
RGD:10046026
NCBI chr 1:121,549,831...121,838,548
Ensembl chr 1:121,550,743...121,831,777
G
Mif
macrophage migration inhibitory factor
IMP
RGD
PMID:12456989
RGD:1642004
NCBI chr20:12,790,919...12,791,784
Ensembl chr20:12,790,902...12,799,504
G
Ndel1
nudE neurodevelopment protein 1-like 1
IMP
RGD
PMID:18431495
RGD:2306515
NCBI chr10:53,505,628...53,582,025
Ensembl chr10:53,516,491...53,570,907
G
Nrg1
neuregulin 1
IDA
RGD
PMID:20957456
RGD:10449012
NCBI chr16:59,250,658...60,304,519
Ensembl chr16:59,250,854...60,296,884
G
Ptn
pleiotrophin
involved_in
IDA
PMID:27671118
UniProt
PMID:27671118
RGD:14397577
NCBI chr 4:65,293,731...65,375,572
Ensembl chr 4:65,293,734...65,375,456
G
Scarf1
scavenger receptor class F, member 1
involved_in
ISO
(PMID:18160648)
RGD
PMID:18160648
NCBI chr10:60,359,213...60,371,516
Ensembl chr10:60,359,197...60,371,516
G
Stk24
serine/threonine kinase 24
IMP
RGD
PMID:19855390
RGD:2317003
NCBI chr15:98,363,707...98,458,940
Ensembl chr15:98,365,791...98,460,553
G
Ache
acetylcholinesterase
IMP
RGD
PMID:12799140
RGD:1299197
NCBI chr12:19,406,133...19,413,713
Ensembl chr12:19,407,360...19,413,651
G
Amigo1
adhesion molecule with Ig like domain 1
involved_in
IDA
PMID:12629050
UniProt
PMID:12629050
RGD:634626
NCBI chr 2:195,823,138...195,828,593
Ensembl chr 2:195,823,042...195,829,585
G
Braf
B-Raf proto-oncogene, serine/threonine kinase
acts_upstream_of_or_within
ISO
MGI:1346866|MGI:1346867 (PMID:24733831)
RGD
PMID:24733831
NCBI chr 4:68,375,484...68,510,652
Ensembl chr 4:68,384,649...68,510,463
G
Chodl
chondrolectin
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr11:17,654,137...17,676,450
Ensembl chr11:17,654,206...17,676,441
G
Cyfip1
cytoplasmic FMR1 interacting protein 1
IMP
RGD
PMID:16260607
RGD:11557987
NCBI chr 1:106,710,924...106,799,393
Ensembl chr 1:106,711,016...106,799,386
G
Dixdc1
DIX domain containing 1
IMP
RGD
PMID:19339625
RGD:2308917
NCBI chr 8:51,007,835...51,081,191
Ensembl chr 8:51,007,838...51,081,090
G
Golga2
golgin A2
acts_upstream_of_or_within
ISO
(PMID:21111240)
RGD
PMID:21111240
NCBI chr 3:15,583,862...15,604,279
Ensembl chr 3:15,584,039...15,604,279
G
Ilk
integrin-linked kinase
IMP
more cells without axons following Ilk inhibition or knock-down
RGD
PMID:17490631
RGD:2301744
NCBI chr 1:160,088,839...160,095,140
Ensembl chr 1:160,088,897...160,095,140
G
Map2k1
mitogen activated protein kinase kinase 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1346867|MGI:88190 (PMID:24733831)
Ensembl RGD
PMID:24733831
GO_REF:0000107
NCBI chr 8:64,683,449...64,754,900
Ensembl chr 8:64,683,449...64,755,147
G
Map2k2
mitogen activated protein kinase kinase 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1346866|MGI:88190 (PMID:24733831)
Ensembl RGD
PMID:24733831
GO_REF:0000107
NCBI chr 7:8,590,729...8,610,279
Ensembl chr 7:8,580,905...8,610,243
G
Map6
microtubule-associated protein 6
involved_in
IMP IBA
PMID:28521134 GO_REF:0000033
GO_Central
PMID:28521134
GO_REF:0000033, RGD:13441203
NCBI chr 1:153,568,020...153,634,415
Ensembl chr 1:153,568,368...153,634,414
G
Metrn
meteorin, glial cell differentiation regulator
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 (PMID:15085178)
GO_Central RGD
PMID:15085178
GO_REF:0000033
NCBI chr10:14,816,684...14,818,702
Ensembl chr10:14,816,572...14,818,701
G
Nefl
neurofilament light chain
acts_upstream_of_or_within
ISO
(PMID:7946341)
RGD
PMID:7946341
NCBI chr15:42,301,920...42,305,793
Ensembl chr15:42,301,916...42,305,793
G
Nin
ninein
acts_upstream_of_or_within
ISO
MGI:1344407 (PMID:25741725)
RGD
PMID:25741725
NCBI chr 6:88,525,405...88,627,710
Ensembl chr 6:88,525,742...88,627,639
G
Nrdc
nardilysin convertase
involved_in
ISS ISO
GO_REF:0000024 (PMID:19935654)
UniProt RGD
PMID:19935654
GO_REF:0000024
NCBI chr 5:123,755,807...123,818,910
Ensembl chr 5:123,755,806...123,818,595
G
Ntrk2
neurotrophic receptor tyrosine kinase 2
involved_in
IMP
PMID:10985347
UniProt
PMID:10985347
RGD:8553408
NCBI chr17:5,558,992...5,870,299
Ensembl chr17:5,559,043...5,869,136
G
Picalm
phosphatidylinositol binding clathrin assembly protein
IMP
RGD
PMID:18842885
RGD:8554167
NCBI chr 1:144,056,415...144,138,045
Ensembl chr 1:144,056,721...144,137,557
G
Plxna1
plexin A1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 4:121,737,934...121,782,901
Ensembl chr 4:121,737,945...122,024,196
G
Plxna2
plexin A2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr13:106,163,103...106,358,979
Ensembl chr13:106,163,103...106,358,979
G
Plxna3
plexin A3
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr X:152,115,699...152,131,608
Ensembl chr X:152,115,819...152,131,603
G
Plxna4
plexin A4
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 4:60,720,246...61,162,206
Ensembl chr 4:60,720,255...61,162,206
G
Plxnb1
plexin B1
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 MGI:109244 (PMID:15330859)
GO_Central RGD
PMID:15330859
GO_REF:0000033
NCBI chr 8:109,743,470...109,769,153
Ensembl chr 8:109,744,697...109,769,027
G
Plxnb2
plexin B2
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 MGI:109244 (PMID:15330859)
GO_Central RGD
PMID:15330859
GO_REF:0000033
NCBI chr 7:120,232,276...120,258,385
Ensembl chr 7:120,232,331...120,258,330
G
Plxnb3
plexin B3
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr X:151,493,832...151,508,688
Ensembl chr X:151,494,207...151,508,674
G
Plxnc1
plexin C1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 7:29,390,038...29,543,985
Ensembl chr 7:29,390,048...29,543,779
G
Plxnd1
plexin D1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 4:149,002,786...149,043,097
Ensembl chr 4:149,002,784...149,043,244
G
Robo1
roundabout guidance receptor 1
involved_in
ISO
(PMID:12504588)
RGD
PMID:12504588
NCBI chr11:10,580,863...11,621,675
Ensembl chr11:10,580,908...11,620,203
G
Robo2
roundabout guidance receptor 2
involved_in
ISO
(PMID:12504588)
RGD
PMID:12504588
NCBI chr11:12,528,949...14,096,726
Ensembl chr11:12,528,951...13,041,536
G
Rpl4
ribosomal protein L4
IMP
RGD
PMID:10964612
RGD:11039443
NCBI chr 8:64,671,177...64,676,301
Ensembl chr 8:64,671,160...64,676,306
G
Rufy3
RUN and FYVE domain containing 3
acts_upstream_of_or_within
ISO
(PMID:24720729)
RGD
PMID:24720729
NCBI chr14:19,431,530...19,506,476
Ensembl chr14:19,432,524...19,507,004
G
Sema4d
semaphorin 4D
acts_upstream_of_or_within
ISO
MGI:2154238|MGI:2154239|MGI:97321|MGI:97383 (PMID:15330859)
RGD
PMID:15330859
NCBI chr17:13,430,324...13,537,146
Ensembl chr17:13,430,379...13,537,138
G
Shox2
SHOX homeobox 2
involved_in
IEA ISO
GO_REF:0000107 (PMID:21156168)
Ensembl RGD
PMID:21156168
GO_REF:0000107
NCBI chr 2:151,217,049...151,227,180
Ensembl chr 2:151,217,552...151,227,143
G
Skil
SKI-like proto-oncogene
involved_in
IMP ISO
(PMID:16675394)
RGD
PMID:16675394 PMID:19339625
RGD:2308917
NCBI chr 2:112,247,047...112,275,176
Ensembl chr 2:112,247,051...112,275,080
G
Slitrk1
SLIT and NTRK-like family, member 1
involved_in
ISO
(PMID:23990902)
RGD
PMID:23990902
NCBI chr15:85,723,252...85,727,290
Ensembl chr15:85,724,475...85,727,509
G
Snap91
synaptosome associated protein 91
IMP
RGD
PMID:18842885
RGD:8554167
NCBI chr 8:87,738,056...87,852,690
Ensembl chr 8:87,738,824...87,852,367
G
Stk11
serine/threonine kinase 11
acts_upstream_of_or_within
ISO
MGI:1891699 (PMID:21111240)
RGD
PMID:21111240
NCBI chr 7:9,574,553...9,591,315
Ensembl chr 7:9,575,269...9,591,315
G
Stk25
serine/threonine kinase 25
acts_upstream_of_or_within
ISO
MGI:108554|MGI:1341870 (PMID:21111240)
RGD
PMID:21111240
NCBI chr 9:94,161,834...94,174,095
Ensembl chr 9:94,161,836...94,174,244
G
Tiam1
TIAM Rac1 associated GEF 1
acts_upstream_of_or_within involved_in
IMP ISO IBA
(PMID:14988728) GO_REF:0000033
RGD GO_Central
PMID:14988728 PMID:11264310
GO_REF:0000033, RGD:10043321
NCBI chr11:29,031,347...29,380,153
Ensembl chr11:29,031,348...29,159,901
G
Tiam2
TIAM Rac1 associated GEF 2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:43,918,179...44,119,499
Ensembl chr 1:43,918,174...44,119,493
G
Trak1
trafficking kinesin protein 1
IMP
RGD
PMID:23395375
RGD:13208834
NCBI chr 8:120,984,445...121,139,357
Ensembl chr 8:120,984,431...121,139,367
G
Zeb2
zinc finger E-box binding homeobox 2
acts_upstream_of_or_within
ISO
MGI:2387499|MGI:2668659 (PMID:25741725)
RGD
PMID:25741725
NCBI chr 3:29,214,581...29,344,890
Ensembl chr 3:29,218,301...29,345,157
G
Bcl11a
BCL11 transcription factor A
involved_in
ISO
(PMID:19616629)
RGD
PMID:19616629
NCBI chr14:98,029,018...98,124,181
Ensembl chr14:98,030,461...98,124,180
G
Bdnf
brain-derived neurotrophic factor
involved_in acts_upstream_of_or_within
ISO IEA
(PMID:19036963) (PMID:24573299) GO_REF:0000107
RGD Ensembl
PMID:19036963 PMID:24573299
GO_REF:0000107
NCBI chr 3:96,165,042...96,215,621
Ensembl chr 3:96,165,042...96,215,615
G
Crabp2
cellular retinoic acid binding protein 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:18052984)
Ensembl RGD
PMID:18052984
GO_REF:0000107
NCBI chr 2:173,417,004...173,421,352
Ensembl chr 2:173,416,857...173,421,379
G
Dcx
doublecortin
IMP
RGD
PMID:19726658
RGD:12904759
NCBI chr X:107,430,767...107,573,612
Ensembl chr X:107,430,767...107,507,476
G
Efna5
ephrin A5
involved_in
ISO
(PMID:19036963)
RGD
PMID:19036963
NCBI chr 9:102,316,753...102,595,480
Ensembl chr 9:102,320,295...102,597,413
G
Ist1
IST1 factor associated with ESCRT-III
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2139806 (PMID:22619377)
Ensembl RGD
PMID:22619377
GO_REF:0000107
NCBI chr19:37,648,840...37,671,019
Ensembl chr19:37,648,095...37,670,956
G
Lpar3
lysophosphatidic acid receptor 3
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:22465231)
Ensembl RGD
PMID:22465231
GO_REF:0000107
NCBI chr 2:235,125,234...235,193,916
Ensembl chr 2:235,149,065...235,193,357
G
Ngf
nerve growth factor
acts_upstream_of_or_within
ISO
(PMID:18052984)
RGD
PMID:18052984
NCBI chr 2:189,901,058...189,954,452
Ensembl chr 2:189,901,058...189,954,452
G
Rnd2
Rho family GTPase 2
acts_upstream_of_or_within
ISO
(PMID:22465231)
RGD
PMID:22465231
NCBI chr10:86,399,151...86,402,750
Ensembl chr10:86,399,148...86,402,742
G
Sema4d
semaphorin 4D
involved_in
ISO
(PMID:19788569)
RGD
PMID:19788569
NCBI chr17:13,430,324...13,537,146
Ensembl chr17:13,430,379...13,537,138
G
Wnt3
Wnt family member 3
acts_upstream_of_or_within
ISO
(PMID:18716223)
RGD
PMID:18716223
NCBI chr10:88,680,198...88,724,170
Ensembl chr10:88,680,248...88,724,099
G
Wnt3a
Wnt family member 3A
acts_upstream_of_or_within
ISO
(PMID:18716223)
RGD
PMID:18716223
NCBI chr10:44,034,174...44,078,366
Ensembl chr10:44,034,194...44,078,324
G
Lrp1
LDL receptor related protein 1
IDA
RGD
PMID:23867460
RGD:13800520
NCBI chr 7:63,380,325...63,461,029
Ensembl chr 7:63,380,356...63,460,910
G
Atoh7
atonal bHLH transcription factor 7
involved_in
ISO
(PMID:33712461)
RGD
PMID:33712461
NCBI chr20:25,530,826...25,531,275
Ensembl chr20:25,530,826...25,531,275
G
Pum2
pumilio RNA-binding family member 2
IMP
RGD
PMID:31606248
RGD:242905203
NCBI chr 6:31,462,879...31,542,976
Ensembl chr 6:31,462,872...31,542,976
G
Cntn2
contactin 2
acts_upstream_of_or_within involved_in
ISO IEA
MGI:2181052 (PMID:18650339) GO_REF:0000107
RGD Ensembl
PMID:18650339
GO_REF:0000107
NCBI chr13:43,942,868...43,975,973
Ensembl chr13:43,947,265...43,975,887
G
Gla
galactosidase, alpha
IMP
RGD
PMID:34541380
RGD:401976419
NCBI chr X:97,769,227...97,780,646
Ensembl chr X:97,768,996...97,780,664
G
Kel
Kell metallo-endopeptidase (Kell blood group)
acts_upstream_of_or_within
ISO
MGI:103569 (PMID:24405768)
RGD
PMID:24405768
NCBI chr 4:70,568,241...70,585,666
Ensembl chr 4:70,568,243...70,585,631
G
Nefl
neurofilament light chain
acts_upstream_of_or_within
ISO
MGI:2180095 (PMID:11343650), (PMID:9398473)
RGD
PMID:9398473 PMID:11343650
NCBI chr15:42,301,920...42,305,793
Ensembl chr15:42,301,916...42,305,793
G
Nefm
neurofilament medium chain
acts_upstream_of_or_within
ISO
MGI:2180106|MGI:2180135 (PMID:10461886), (PMID:9566972)
RGD
PMID:9566972 PMID:10461886
NCBI chr15:42,360,449...42,365,753
Ensembl chr15:42,360,454...42,365,755
G
Wnt7a
Wnt family member 7A
acts_upstream_of_or_within
ISO
(PMID:9405095)
RGD
PMID:9405095
NCBI chr 4:123,863,108...123,908,981
Ensembl chr 4:123,863,108...123,908,981
G
Xk
X-linked Kx blood group antigen, Kell and VPS13A binding protein
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1346053 (PMID:24405768)
Ensembl RGD
PMID:24405768
GO_REF:0000107
NCBI chr X:13,436,412...13,472,830
Ensembl chr X:13,436,418...13,472,830
G
Abl1
ABL proto-oncogene 1, non-receptor tyrosine kinase
involved_in
ISO
(PMID:24520051)
RGD
PMID:24520051
NCBI chr 3:14,979,853...15,083,065
Ensembl chr 3:14,979,853...15,083,065
G
Barhl2
BarH-like homeobox 2
acts_upstream_of_or_within
ISO
(PMID:12657654)
RGD
PMID:12657654
NCBI chr14:3,340,465...3,345,362
Ensembl chr14:3,340,465...3,345,353
G
Bdnf
brain-derived neurotrophic factor
IMP
RGD
PMID:14697662
RGD:8655852
NCBI chr 3:96,165,042...96,215,621
Ensembl chr 3:96,165,042...96,215,615
G
Clasp2
cytoplasmic linker associated protein 2
involved_in
ISO
(PMID:24520051)
RGD
PMID:24520051
NCBI chr 8:113,677,345...113,859,957
Ensembl chr 8:113,677,284...113,858,731
G
Cttn
cortactin
involved_in
IMP
PMID:21210813
UniProt
PMID:21210813
RGD:10047315
NCBI chr 1:199,599,710...199,635,254
Ensembl chr 1:199,599,710...199,635,164
G
Dnm2
dynamin 2
involved_in
IMP
PMID:21210813
UniProt
PMID:21210813
RGD:10047315
NCBI chr 8:19,978,313...20,060,162
Ensembl chr 8:19,978,400...20,060,157
G
Dpysl2
dihydropyrimidinase-like 2
NAS
RGD
PMID:7472434
RGD:728576
NCBI chr15:41,005,551...41,111,724
Ensembl chr15:41,005,551...41,111,829
G
Gsk3b
glycogen synthase kinase 3 beta
IMP
RGD
PMID:15652487
RGD:10045567
NCBI chr11:62,498,997...62,648,665
Ensembl chr11:62,504,316...62,648,646
G
Mgll
monoglyceride lipase
acts_upstream_of_or_within
ISO
(PMID:20962221)
RGD
PMID:20962221
NCBI chr 4:121,192,186...121,294,187
Ensembl chr 4:121,192,195...121,294,179
G
Nkx6-1
NK6 homeobox 1
acts_upstream_of_or_within
ISO
MGI:2386119 (PMID:19592574)
RGD
PMID:19592574
NCBI chr14:7,969,756...7,976,689
Ensembl chr14:7,969,756...7,976,681
G
Olfm1
olfactomedin 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:22923615)
UniProt RGD
PMID:22923615
GO_REF:0000024
NCBI chr 3:11,520,522...11,558,240
Ensembl chr 3:11,520,729...11,558,239
G
Rab21
RAB21, member RAS oncogene family
involved_in
IDA
PMID:19745841
UniProt
PMID:19745841
RGD:8554110
NCBI chr 7:50,904,050...50,928,890
Ensembl chr 7:50,904,057...50,928,839
G
Sin3a
SIN3 transcription regulator family member A
involved_in
ISO
(PMID:27399968)
RGD
PMID:27399968
NCBI chr 8:57,481,539...57,536,195
Ensembl chr 8:57,481,573...57,536,192
G
Smurf1
SMAD specific E3 ubiquitin protein ligase 1
ISO
RGD
PMID:17728459
RGD:2302549
NCBI chr12:9,635,009...9,726,520
Ensembl chr12:9,635,025...9,726,519
G
Ttl
tubulin tyrosine ligase
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3584264 (PMID:15899979)
Ensembl RGD
PMID:15899979
GO_REF:0000107
NCBI chr 3:116,298,813...116,328,538
Ensembl chr 3:116,298,797...116,328,538
G
Wdr36
WD repeat domain 36
acts_upstream_of_or_within
ISO
(PMID:20631153)
RGD
PMID:20631153
NCBI chr18:24,473,657...24,501,773
Ensembl chr18:24,473,663...24,508,092
G
Nrp1
neuropilin 1
acts_upstream_of_or_within
ISO
(PMID:15814794)
RGD
PMID:15814794
NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
G
Plxna4
plexin A4
acts_upstream_of_or_within
ISO
MGI:3578655 (PMID:15814794)
RGD
PMID:15814794
NCBI chr 4:60,720,246...61,162,206
Ensembl chr 4:60,720,255...61,162,206
G
Sema3a
semaphorin 3A
involved_in
ISO
(PMID:18053124) (PMID:15155748)
RGD
PMID:15155748 PMID:18053124
NCBI chr 4:21,282,398...21,754,834
Ensembl chr 4:21,287,982...21,494,432
G
Agrn
agrin
IDA
RGD
PMID:17870250
RGD:2304008
NCBI chr 5:166,749,306...166,782,212
Ensembl chr 5:166,749,310...166,786,003
G
Fezf2
Fez family zinc finger 2
acts_upstream_of_or_within
ISO
MGI:3046867|MGI:3525887 (PMID:16284245), (PMID:16314561), (PMID:24997765)
RGD
PMID:16284245 PMID:16314561 PMID:24997765
NCBI chr15:12,768,614...12,777,554
Ensembl chr15:12,773,762...12,777,554
G
Kif21a
kinesin family member 21A
involved_in
ISO
(PMID:24120883)
RGD
PMID:24120883
NCBI chr 7:122,062,523...122,179,051
Ensembl chr 7:122,062,537...122,178,999
G
Mycbp2
MYC binding protein 2
involved_in
ISO
(PMID:17901218)
RGD
PMID:17901218
NCBI chr15:79,937,354...80,175,432
Ensembl chr15:79,937,354...80,175,498
G
Nova2
NOVA alternative splicing regulator 2
involved_in
ISO
(PMID:27223325)
RGD
PMID:27223325
NCBI chr 1:78,572,253...78,613,703
Ensembl chr 1:78,572,279...78,608,021
G
Tbr1
T-box brain transcription factor 1
acts_upstream_of_or_within
ISO
MGI:2179766 (PMID:11967891), (PMID:24441682)
RGD
PMID:11967891 PMID:24441682
NCBI chr 3:46,350,237...46,368,397
Ensembl chr 3:46,351,213...46,361,041
G
Ythdf1
YTH N6-methyladenosine RNA binding protein F1
involved_in
ISO
(PMID:30843071)
RGD
PMID:30843071
NCBI chr 3:168,024,660...168,040,172
Ensembl chr 3:168,024,663...168,040,172
G
Adam17
ADAM metallopeptidase domain 17
acts_upstream_of_or_within
ISO
MGI:2443718 (PMID:26651291)
RGD
PMID:26651291
NCBI chr 6:40,872,936...40,920,700
Ensembl chr 6:40,872,856...40,920,639
G
Braf
B-Raf proto-oncogene, serine/threonine kinase
acts_upstream_of_or_within
ISO
MGI:1346866|MGI:1346867 (PMID:24733831)
RGD
PMID:24733831
NCBI chr 4:68,375,484...68,510,652
Ensembl chr 4:68,384,649...68,510,463
G
Klf4
KLF transcription factor 4
acts_upstream_of_or_within
ISO
MGI:103038 (PMID:24129709)
RGD
PMID:24129709
NCBI chr 5:70,278,843...70,283,751
Ensembl chr 5:70,278,972...70,283,602
G
Lrig2
leucine-rich repeats and immunoglobulin-like domains 2
acts_upstream_of_or_within
ISO
MGI:1096335|MGI:1097159 (PMID:26651291)
RGD
PMID:26651291
NCBI chr 2:191,947,322...192,012,996
Ensembl chr 2:191,949,819...192,012,579
G
Map2k1
mitogen activated protein kinase kinase 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1346867|MGI:88190 (PMID:24733831)
Ensembl RGD
PMID:24733831
GO_REF:0000107
NCBI chr 8:64,683,449...64,754,900
Ensembl chr 8:64,683,449...64,755,147
G
Map2k2
mitogen activated protein kinase kinase 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1346866|MGI:88190 (PMID:24733831)
Ensembl RGD
PMID:24733831
GO_REF:0000107
NCBI chr 7:8,590,729...8,610,279
Ensembl chr 7:8,580,905...8,610,243
G
Neo1
neogenin 1
acts_upstream_of_or_within
ISO
MGI:2443718 (PMID:26651291)
RGD
PMID:26651291
NCBI chr 8:59,273,860...59,426,486
Ensembl chr 8:59,275,569...59,430,348
G
Pten
phosphatase and tensin homolog
acts_upstream_of_or_within
ISO
MGI:88190 (PMID:24733831)
RGD
PMID:24733831
NCBI chr 1:230,630,443...230,697,070
Ensembl chr 1:230,630,338...230,696,838
G
Ptprf
protein tyrosine phosphatase, receptor type, F
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:21976490)
Ensembl RGD
PMID:21976490
GO_REF:0000107
NCBI chr 5:131,741,959...131,824,000
Ensembl chr 5:131,742,754...131,810,023
G
Stk24
serine/threonine kinase 24
involved_in
ISO
(PMID:19855390)
RGD
PMID:19855390
NCBI chr15:98,363,707...98,458,940
Ensembl chr15:98,365,791...98,460,553
G
Arhgap35
Rho GTPase activating protein 35
involved_in
ISS ISO IBA
GO_REF:0000024 (PMID:11283609) GO_REF:0000033
UniProt RGD GO_Central
PMID:11283609
GO_REF:0000024 GO_REF:0000033
NCBI chr 1:77,202,436...77,319,298
Ensembl chr 1:77,202,436...77,319,298
G
Brsk1
BR serine/threonine kinase 1
involved_in
ISO
UniProtKB:Q69Z98 (PMID:18268107)
RGD
PMID:18268107
NCBI chr 1:69,134,166...69,159,947
Ensembl chr 1:69,134,565...69,160,365
G
Brsk2
BR serine/threonine kinase 2
involved_in
IEA ISO
GO_REF:0000107 UniProtKB:Q5RJI5 (PMID:18268107)
Ensembl RGD
PMID:18268107
GO_REF:0000107
NCBI chr 1:197,035,505...197,088,624
Ensembl chr 1:197,035,633...197,088,092
G
Cacna1a
calcium voltage-gated channel subunit alpha1 A
acts_upstream_of_or_within
ISO
MGI:1856209 (PMID:572084)
RGD
PMID:572084
NCBI chr19:23,520,741...23,819,971
Ensembl chr19:23,520,741...23,823,225
G
Cdh2
cadherin 2
IMP
RGD
PMID:12657688
RGD:1299191
NCBI chr18:7,776,704...7,990,934
Ensembl chr18:7,776,704...7,990,167
G
Chn1
chimerin 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:17719550) (PMID:17785183)
UniProt RGD
PMID:17719550 PMID:17785183
GO_REF:0000024
NCBI chr 3:58,509,822...58,676,462
Ensembl chr 3:58,510,536...58,676,490
G
Efna1
ephrin A1
acts_upstream_of_or_within
ISO
(PMID:14988728)
RGD
PMID:14988728
NCBI chr 2:174,681,676...174,689,061
Ensembl chr 2:174,681,682...174,690,866
G
Epha4
Eph receptor A4
involved_in
ISS ISO
GO_REF:0000024 (PMID:15537875)
UniProt RGD
PMID:15537875
GO_REF:0000024
NCBI chr 9:78,815,460...78,958,139
Ensembl chr 9:78,815,460...78,958,139
G
Ephb2
Eph receptor B2
acts_upstream_of_or_within
ISO
(PMID:14988728)
RGD
PMID:14988728
NCBI chr 5:148,889,574...149,077,027
Ensembl chr 5:148,897,246...149,077,059
G
Ephb3
Eph receptor B3
involved_in
ISO
(PMID:17719550)
RGD
PMID:17719550
NCBI chr11:79,840,668...79,859,345
Ensembl chr11:79,840,668...79,859,370
G
Grin1
glutamate ionotropic receptor NMDA type subunit 1
acts_upstream_of_or_within
ISO
MGI:1928270 (PMID:15745956)
RGD
PMID:15745956
NCBI chr 3:8,103,680...8,130,603
Ensembl chr 3:8,103,680...8,130,603
G
Gsk3b
glycogen synthase kinase 3 beta
IMP
RGD
PMID:15652487
RGD:10045567
NCBI chr11:62,498,997...62,648,665
Ensembl chr11:62,504,316...62,648,646
G
Kif13b
kinesin family member 13B
involved_in
ISO
(PMID:20194617)
RGD
PMID:20194617
NCBI chr15:38,908,257...39,066,021
Ensembl chr15:38,924,624...39,084,879
G
Lrrc4c
leucine rich repeat containing 4C
involved_in
ISO IBA
(PMID:14595443) GO_REF:0000033
RGD GO_Central
PMID:14595443
GO_REF:0000033
NCBI chr 3:82,305,495...83,684,039
Ensembl chr 3:83,483,851...83,687,774
G
Mark2
microtubule affinity regulating kinase 2
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:20194617)
UniProt Ensembl RGD
PMID:20194617
GO_REF:0000024 GO_REF:0000107
NCBI chr 1:204,461,029...204,526,247
Ensembl chr 1:204,461,030...204,525,652
G
Pak1
p21 (RAC1) activated kinase 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:152,111,172...152,226,390
Ensembl chr 1:152,111,188...152,226,383
G
Pak2
p21 (RAC1) activated kinase 2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr11:68,707,940...68,768,816
Ensembl chr11:68,707,969...68,768,816
G
Pak3
p21 (RAC1) activated kinase 3
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr X:107,116,308...107,374,342
Ensembl chr X:107,260,898...107,368,314
G
Pou3f2
POU class 3 homeobox 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1857996 (PMID:8543156)
Ensembl RGD
PMID:8543156
GO_REF:0000107
NCBI chr 5:36,077,930...36,083,838
Ensembl chr 5:36,077,930...36,083,838
G
Ret
ret proto-oncogene
acts_upstream_of_or_within
ISO
MGI:2386570|MGI:4413350 (PMID:17553423)
RGD
PMID:17553423
NCBI chr 4:151,325,969...151,368,176
Ensembl chr 4:151,326,431...151,368,176
G
Rufy3
RUN and FYVE domain containing 3
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 (PMID:24720729)
GO_Central RGD
PMID:24720729
GO_REF:0000033
NCBI chr14:19,431,530...19,506,476
Ensembl chr14:19,432,524...19,507,004
G
Sipa1l1
signal-induced proliferation-associated 1 like 1
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:18094260) GO_REF:0000107
UniProt RGD Ensembl
PMID:18094260
GO_REF:0000024 GO_REF:0000107
NCBI chr 6:101,839,351...102,118,408
Ensembl chr 6:101,839,404...102,116,950
G
Ust
uronyl-2-sulfotransferase
acts_upstream_of_or_within
ISO
(PMID:20600662)
RGD
PMID:20600662
NCBI chr 1:2,666,983...2,962,276
Ensembl chr 1:2,669,592...2,962,044
G
Vim
vimentin
IDA
RGD
PMID:22371530
RGD:6480474
NCBI chr17:76,668,701...76,677,186
Ensembl chr17:76,668,647...76,677,187
G
Wnt3a
Wnt family member 3A
acts_upstream_of_or_within
ISO
MGI:88039 (PMID:18716223)
RGD
PMID:18716223
NCBI chr10:44,034,174...44,078,366
Ensembl chr10:44,034,194...44,078,324
G
Wnt7a
Wnt family member 7A
acts_upstream_of_or_within
ISO
(PMID:9405095)
RGD
PMID:9405095
NCBI chr 4:123,863,108...123,908,981
Ensembl chr 4:123,863,108...123,908,981
G
Bdnf
brain-derived neurotrophic factor
acts_upstream_of_or_within
ISO
MGI:2443199 (PMID:24573299)
RGD
PMID:24573299
NCBI chr 3:96,165,042...96,215,621
Ensembl chr 3:96,165,042...96,215,615
G
Fstl4
follistatin-like 4
acts_upstream_of_or_within
ISO
MGI:88145 (PMID:24573299)
RGD
PMID:24573299
NCBI chr10:36,911,422...37,344,545
Ensembl chr10:36,911,420...37,338,588
G
Omg
oligodendrocyte-myelin glycoprotein
acts_upstream_of_or_within
ISO
MGI:3821628 (PMID:18692574)
RGD
PMID:18692574
NCBI chr10:64,461,350...64,464,084
Ensembl chr10:64,461,350...64,464,084
G
Pou4f2
POU class 4 homeobox 2
involved_in
ISS ISO
GO_REF:0000024 (PMID:11163266)
UniProt RGD
PMID:11163266
GO_REF:0000024
NCBI chr19:29,486,686...29,490,327
Ensembl chr19:29,486,686...29,490,327
G
Alcam
activated leukocyte cell adhesion molecule
involved_in
ISS
GO_REF:0000024
UniProt
GO_REF:0000024
NCBI chr11:48,336,123...48,536,296
Ensembl chr11:48,336,169...48,537,954
G
Bmpr1b
bone morphogenetic protein receptor type 1B
acts_upstream_of_or_within
ISO
MGI:2158497 (PMID:12654290)
RGD
PMID:12654290
NCBI chr 2:230,538,252...230,871,077
Ensembl chr 2:230,541,558...230,871,368
G
Efna5
ephrin A5
acts_upstream_of_or_within
ISO
(PMID:15996548)
RGD
PMID:15996548
NCBI chr 9:102,316,753...102,595,480
Ensembl chr 9:102,320,295...102,597,413
G
Epha7
Eph receptor A7
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3583808 (PMID:15996548)
Ensembl RGD
PMID:15996548
GO_REF:0000107
NCBI chr 5:42,975,353...43,128,703
Ensembl chr 5:42,975,405...43,127,112
G
Ephb1
Eph receptor B1
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 (PMID:12971893)
UniProt RGD
PMID:12971893
GO_REF:0000024
NCBI chr 8:102,507,549...102,944,839
Ensembl chr 8:102,507,549...102,944,839
G
Ephb2
Eph receptor B2
acts_upstream_of_or_within
ISO
(PMID:12971893)
RGD
PMID:12971893
NCBI chr 5:148,889,574...149,077,027
Ensembl chr 5:148,897,246...149,077,059
G
Ephb3
Eph receptor B3
acts_upstream_of_or_within
ISO
(PMID:12971893)
RGD
PMID:12971893
NCBI chr11:79,840,668...79,859,345
Ensembl chr11:79,840,668...79,859,370
G
Isl1
ISL LIM homeobox 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3790243 (PMID:18434421)
Ensembl RGD
PMID:18434421
GO_REF:0000107
NCBI chr 2:48,079,412...48,090,704
Ensembl chr 2:48,080,522...48,095,584
G
Isl2
ISL LIM homeobox 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3046260 (PMID:15537545)
Ensembl RGD
PMID:15537545
GO_REF:0000107
NCBI chr 8:55,923,805...55,928,790
Ensembl chr 8:55,923,805...55,928,790
G
Ndp
norrin cystine knot growth factor NDP
acts_upstream_of_or_within
ISO
(PMID:29079753)
RGD
PMID:29079753
NCBI chr X:5,796,487...5,820,934
Ensembl chr X:5,796,487...5,820,934
G
Nrcam
neuronal cell adhesion molecule
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2387976 (PMID:16701205)
Ensembl RGD
PMID:16701205
GO_REF:0000107
NCBI chr 6:61,402,813...61,698,536
Ensembl chr 6:61,329,863...61,702,992
G
Nrp1
neuropilin 1
involved_in
ISO
(PMID:21658587)
RGD
PMID:21658587
NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
G
Pou4f2
POU class 4 homeobox 2
acts_upstream_of_or_within
ISO
MGI:102523|MGI:2429634 (PMID:11807038), (PMID:18434421)
RGD
PMID:11807038 PMID:18434421
NCBI chr19:29,486,686...29,490,327
Ensembl chr19:29,486,686...29,490,327
G
Pou4f3
POU class 4 homeobox 3
acts_upstream_of_or_within
ISO
MGI:102524 (PMID:11807038)
RGD
PMID:11807038
NCBI chr18:34,390,205...34,392,797
Ensembl chr18:34,390,205...34,392,797
G
Ptprm
protein tyrosine phosphatase, receptor type, M
involved_in
ISO ISS
(PMID:15080886) GO_REF:0000024
RGD UniProt
PMID:15080886
GO_REF:0000024
NCBI chr 9:106,639,573...107,343,698
Ensembl chr 9:106,639,573...107,343,698
G
Robo2
roundabout guidance receptor 2
involved_in
ISO
(PMID:19782674)
RGD
PMID:19782674
NCBI chr11:12,528,949...14,096,726
Ensembl chr11:12,528,951...13,041,536
G
Rpl24
ribosomal protein L24
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1856685 (PMID:9331275)
Ensembl RGD
PMID:9331275
GO_REF:0000107
NCBI chr11:44,653,937...44,659,346
Ensembl chr11:44,653,937...44,659,370
G
Sema4f
ssemaphorin 4F
acts_upstream_of_or_within
IDA
PMID:10051670
MGI
PMID:10051670
RGD:69991
NCBI chr 4:115,411,411...115,437,721
Ensembl chr 4:115,411,417...115,437,721
G
Slit1
slit guidance ligand 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1315205|MGI:2179459 (PMID:11804570), (PMID:16828733), (PMID:16885222)
Ensembl RGD
PMID:11804570 PMID:16828733 PMID:16885222
GO_REF:0000107
NCBI chr 1:240,409,559...240,558,127
Ensembl chr 1:240,409,561...240,558,127
G
Slit2
slit guidance ligand 2
involved_in acts_upstream_of_or_within
ISO IEA
(PMID:10864954), (PMID:19498462) MGI:1315203|MGI:2179460 (PMID:11804570), (PMID:16828733), (PMID:16885222) GO_REF:0000107
RGD Ensembl
PMID:10864954 PMID:11804570 PMID:16828733 PMID:16885222 PMID:19498462
GO_REF:0000107
NCBI chr14:62,616,337...62,955,934
Ensembl chr14:62,617,067...62,955,948
G
Vegfa
vascular endothelial growth factor A
involved_in NOT|involved_in
ISO
(PMID:21658587)
RGD
PMID:21658587
NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641
G
Zic2
Zic family member 2
involved_in
ISO
(PMID:13678579)
RGD
PMID:13678579
NCBI chr15:99,576,697...99,581,522
Ensembl chr15:99,576,697...99,581,522
G
Ece1
endothelin converting enzyme 1
involved_in
IEA ISO
GO_REF:0000107 MGI:1857637|MGI:2158947|MGI:2687362 (PMID:30735130)
Ensembl RGD
PMID:30735130
GO_REF:0000107
NCBI chr 5:150,077,679...150,179,375
Ensembl chr 5:150,077,644...150,179,371
G
Edn1
endothelin 1
involved_in
ISO
MGI:1857637|MGI:2158947|MGI:2687362 (PMID:30735130)
RGD
PMID:30735130
NCBI chr17:22,454,924...22,460,812
Ensembl chr17:22,454,420...22,460,885
G
Ednra
endothelin receptor type A
involved_in
IEA ISO
GO_REF:0000107 MGI:1857637|MGI:2158947|MGI:2687362 (PMID:30735130)
Ensembl RGD
PMID:30735130
GO_REF:0000107
NCBI chr19:30,233,540...30,303,727
Ensembl chr19:30,233,571...30,297,049
G
Mef2c
myocyte enhancer factor 2C
involved_in
ISO
MGI:1857637|MGI:2158947|MGI:2687362 (PMID:30735130)
RGD
PMID:30735130
NCBI chr 2:13,973,299...14,136,065
Ensembl chr 2:13,993,438...14,132,880
G
Gbx1
gastrulation brain homeobox 1
acts_upstream_of_or_within
ISO
(PMID:23418536)
RGD
PMID:23418536
NCBI chr 4:10,645,957...10,672,486
Ensembl chr 4:10,645,957...10,672,486
G
Nrp1
neuropilin 1
involved_in
ISO
(PMID:18356247)
RGD
PMID:18356247
NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
G
Nrp2
neuropilin 2
involved_in
IEA ISO
GO_REF:0000107 (PMID:18356247)
Ensembl RGD
PMID:18356247
GO_REF:0000107
NCBI chr 9:64,122,815...64,238,007
Ensembl chr 9:64,123,132...64,237,958
G
Celsr3
cadherin, EGF LAG seven-pass G-type receptor 3
involved_in
ISO
(PMID:21106844)
RGD
PMID:21106844
NCBI chr 8:109,530,597...109,558,360
Ensembl chr 8:109,530,641...109,558,354
G
Fzd3
frizzled class receptor 3
involved_in
ISO
(PMID:21106844)
RGD
PMID:21106844
NCBI chr15:39,421,366...39,488,369
Ensembl chr15:39,421,355...39,488,369
G
Pcdhac2
protocadherin alpha subfamily C, 2
acts_upstream_of_or_within
ISO
(PMID:29162883)
RGD
PMID:29162883
Ensembl chr18:28,581,225...28,846,211
G
Vangl2
VANGL planar cell polarity protein 2
involved_in
ISO
(PMID:21106844)
RGD
PMID:21106844
NCBI chr13:84,462,731...84,489,404
Ensembl chr13:84,465,527...84,489,378
G
Evx1
even-skipped homeobox 1
acts_upstream_of_or_within
ISO
MGI:2182858 (PMID:11239430)
RGD
PMID:11239430
NCBI chr 4:81,416,590...81,420,967
Ensembl chr 4:81,416,590...81,420,967
G
Adarb1
adenosine deaminase, RNA-specific, B1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:4840554 (PMID:20826656)
Ensembl RGD
PMID:20826656
GO_REF:0000107
NCBI chr20:11,222,569...11,350,854
Ensembl chr20:11,222,583...11,350,852
G
Dcc
DCC netrin 1 receptor
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1934924 (PMID:9126737)
Ensembl RGD
PMID:9126737
GO_REF:0000107
NCBI chr18:64,868,987...65,972,783
Ensembl chr18:64,873,898...65,972,740
G
Gli2
GLI family zinc finger 2
acts_upstream_of_or_within
ISO
MGI:1857509 (PMID:10409510)
RGD
PMID:10409510
NCBI chr13:29,946,882...30,163,589
Ensembl chr13:29,946,809...30,163,574
G
Ece1
endothelin converting enzyme 1
involved_in
IEA ISO
GO_REF:0000107 MGI:1857637|MGI:2158947|MGI:2687362|MGI:3718323 (PMID:30735130)
Ensembl RGD
PMID:30735130
GO_REF:0000107
NCBI chr 5:150,077,679...150,179,375
Ensembl chr 5:150,077,644...150,179,371
G
Edn1
endothelin 1
involved_in
ISO
MGI:1857637|MGI:2158947|MGI:2687362|MGI:3718323 (PMID:30735130)
RGD
PMID:30735130
NCBI chr17:22,454,924...22,460,812
Ensembl chr17:22,454,420...22,460,885
G
Ednra
endothelin receptor type A
involved_in
IEA ISO
GO_REF:0000107 MGI:2179061 (PMID:30735130)
Ensembl RGD
PMID:30735130
GO_REF:0000107
NCBI chr19:30,233,540...30,303,727
Ensembl chr19:30,233,571...30,297,049
G
Mef2c
myocyte enhancer factor 2C
involved_in
ISO
MGI:1857637|MGI:2158947|MGI:2687362|MGI:3718323 (PMID:30735130)
RGD
PMID:30735130
NCBI chr 2:13,973,299...14,136,065
Ensembl chr 2:13,993,438...14,132,880
G
Plxna4
plexin A4
involved_in
ISO
MGI:105923 (PMID:30735130)
RGD
PMID:30735130
NCBI chr 4:60,720,246...61,162,206
Ensembl chr 4:60,720,255...61,162,206
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all