Gene: Gpm6b (glycoprotein m6b) Rattus norvegicus
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Symbol: Gpm6b
Name: glycoprotein m6b
Description: INVOLVED IN extracellular matrix assembly (ortholog); negative regulation of protein localization to cell surface (ortholog); negative regulation of serotonin uptake (ortholog); ASSOCIATED WITH autistic disorder (ortholog); FOUND IN membrane raft (ortholog); plasma membrane (ortholog); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 3,3',4,4',5-pentachlorobiphenyl; ammonium chloride
AGR Description: Predicted to be involved in several processes, including extracellular matrix assembly, negative regulation of protein localization to cell surface, and negative regulation of serotonin uptake; predicted to localize to the membrane raft and plasma membrane; orthologous to human GPM6B (glycoprotein M6B).
Merged Description: Predicted to be involved in several processes, including extracellular matrix assembly, negative regulation of protein localization to cell surface, and negative regulation of serotonin uptake; predicted to localize to the membrane raft and plasma membrane; orthologous to human GPM6B (glycoprotein M6B); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 3,3',4,4',5-pentachlorobiphenyl; ammonium chloride.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: M6b; neuronal membrane glycoprotein M6-b; rhombencephalic expression protein-29 kDa; Rhombex-29
Orthologs:
Homo sapiens (human) : GPM6B (glycoprotein M6B)  HGNC  Alliance
Mus musculus (house mouse) : Gpm6b (glycoprotein m6b)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Gpm6b (glycoprotein M6B)
Pan paniscus (bonobo/pygmy chimpanzee) : GPM6B (glycoprotein M6B)
Canis lupus familiaris (dog) : GPM6B (glycoprotein M6B)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Gpm6b (glycoprotein M6B)
Sus scrofa (pig) : GPM6B (glycoprotein M6B)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0X29,604,607 - 29,751,174 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0X29,997,897 - 30,145,125 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X48,746,584 - 48,788,414 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1X48,800,052 - 48,841,883 (-)NCBI
CeleraX28,432,966 - 28,474,260 (-)NCBICelera
Cytogenetic MapXq13-q14NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Gpm6b
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 620580
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-04-12
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.