Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Nectin1 (nectin cell adhesion molecule 1) Rattus norvegicus
Symbol: Nectin1
Name: nectin cell adhesion molecule 1
Description: Exhibits carbohydrate binding activity and virion binding activity. Involved in axon guidance; regulation of synapse assembly; and viral entry into host cell. Localizes to several cellular components, including dendrite; growth cone membrane; and synapse. Human ortholog(s) of this gene implicated in cleft lip; cleft lip-palate-ectodermal dysplasia syndrome; cleft palate; and ectodermal dysplasia. Orthologous to human NECTIN1 (nectin cell adhesion molecule 1); INTERACTS WITH 1,2-dimethylhydrazine; 17alpha-ethynylestradiol; 17beta-estradiol.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: HveC; nectin; nectin); nectin-1; poliovirus receptor-related 1 (herpesvirus entry mediator C; poliovirus receptor-related 1 (herpesvirus entry mediator C, nectin); poliovirus receptor-related protein 1; Pvrl1
Homo sapiens (human) : NECTIN1 (nectin cell adhesion molecule 1)  HGNC  Alliance
Mus musculus (house mouse) : Nectin1 (nectin cell adhesion molecule 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Nectin1 (nectin cell adhesion molecule 1)
Pan paniscus (bonobo/pygmy chimpanzee) : NECTIN1 (nectin cell adhesion molecule 1)
Canis lupus familiaris (dog) : NECTIN1 (nectin cell adhesion molecule 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Nectin1 (nectin cell adhesion molecule 1)
Sus scrofa (pig) : NECTIN1 (nectin cell adhesion molecule 1)
Chlorocebus sabaeus (African green monkey) : NECTIN1 (nectin cell adhesion molecule 1)
Heterocephalus glaber (naked mole-rat) : Nectin1 (nectin cell adhesion molecule 1)
more info ...
Allele / Splice: Nectin1Tn(sb-T2/Bart3)2.284Mcwi  
Genetic Models: F344-Nectin1Tn(sb-T2/Bart3)2.284Mcwi
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Rat AssemblyChrPosition (strand)SourceGenome Browsers
Rnor_6.0848,094,233 - 48,198,499 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl848,094,673 - 48,157,305 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0846,714,981 - 46,777,484 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4846,739,657 - 46,799,051 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1846,807,104 - 46,807,754 (+)NCBI
Celera843,690,971 - 43,754,034 (+)NCBICelera
Cytogenetic Map8q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)

Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated


Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
Genetic Models
miRNA Target Status


RNA-SEQ Expression


Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
More on Nectin1
Alliance Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 620791
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.