Gene: Nectin1 (nectin cell adhesion molecule 1) Rattus norvegicus
Analyze
Symbol: Nectin1
Name: nectin cell adhesion molecule 1
Description: ENCODES a protein that exhibits carbohydrate binding; protein heterodimerization activity; virion binding; INVOLVED IN axon guidance; regulation of synapse assembly; viral entry into host cell; ASSOCIATED WITH cleft lip (ortholog); cleft lip-palate-ectodermal dysplasia syndrome (ortholog); cleft palate (ortholog); FOUND IN axon; dendrite; growth cone membrane; INTERACTS WITH 1,2-dimethylhydrazine; 17alpha-ethynylestradiol; 17beta-estradiol
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: HveC; nectin; nectin); nectin-1; poliovirus receptor-related 1 (herpesvirus entry mediator C; poliovirus receptor-related 1 (herpesvirus entry mediator C, nectin); poliovirus receptor-related protein 1; Pvrl1
Orthologs:
Homo sapiens (human) : NECTIN1 (nectin cell adhesion molecule 1)  HGNC  Alliance
Mus musculus (house mouse) : Nectin1 (nectin cell adhesion molecule 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Nectin1 (nectin cell adhesion molecule 1)
Pan paniscus (bonobo/pygmy chimpanzee) : NECTIN1 (nectin cell adhesion molecule 1)
Canis lupus familiaris (dog) : NECTIN1 (nectin cell adhesion molecule 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Nectin1 (nectin cell adhesion molecule 1)
Sus scrofa (pig) : NECTIN1 (nectin cell adhesion molecule 1)
more info ...
Allele / Splice: Nectin1Tn(sb-T2/Bart3)2.284Mcwi  
Genetic Models: F344-Nectin1Tn(sb-T2/Bart3)2.284Mcwi
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0848,094,233 - 48,198,499 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0846,714,981 - 46,777,484 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4846,739,657 - 46,799,051 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1846,807,104 - 46,807,754 (+)NCBI
Celera843,690,971 - 43,754,034 (+)NCBICelera
Cytogenetic Map8q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model

Annotation    (Toggle Annotation Detail/Summary View)

Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
Genetic Models
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
  
More on Nectin1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 620791
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-01-30
Status: ACTIVE



Contact Us |  About Us |  Jobs at RGD