Gene: Etv1 (ets variant 1) Rattus norvegicus
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Symbol: Etv1
Name: ets variant 1
Description: ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II proximal promoter sequence-specific DNA binding (ortholog); INVOLVED IN axon guidance (ortholog); mechanosensory behavior (ortholog); muscle organ development (ortholog); ASSOCIATED WITH Colorectal Neoplasms (ortholog); Neoplastic Processes (ortholog); pleomorphic xanthoastrocytoma (ortholog); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 17beta-estradiol; 6-propyl-2-thiouracil
AGR Description: Predicted to have DNA-binding transcription activator activity, RNA polymerase II-specific and RNA polymerase II proximal promoter sequence-specific DNA binding activity; predicted to be involved in several processes, including axon guidance, mechanosensory behavior, and muscle organ development; predicted to localize to the nucleus; orthologous to human ETV1 (ETS variant 1).
Merged Description: Predicted to have DNA-binding transcription activator activity, RNA polymerase II-specific and RNA polymerase II proximal promoter sequence-specific DNA binding activity; predicted to be involved in several processes, including axon guidance, mechanosensory behavior, and muscle organ development; predicted to localize to the nucleus; orthologous to human ETV1 (ETS variant 1); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 17beta-estradiol; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: ETS translocation variant 1; ets variant gene 1; LOC362733
Orthologs:
Homo sapiens (human) : ETV1 (ETS variant 1)  HGNC  Alliance
Mus musculus (house mouse) : Etv1 (ets variant 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Etv1 (ETS variant 1)
Pan paniscus (bonobo/pygmy chimpanzee) : ETV1 (ETS variant 1)
Canis lupus familiaris (dog) : ETV1 (ETS variant 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Etv1 (ETS variant 1)
Sus scrofa (pig) : ETV1 (ETS variant 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0658,467,215 - 58,558,640 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0668,061,085 - 68,152,530 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4657,674,561 - 57,766,401 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1657,679,250 - 57,764,378 (+)NCBI
Celera654,687,578 - 54,778,854 (+)NCBICelera
Cytogenetic Map6q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Etv1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1312007
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-12
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.