Epha10 (EPH receptor A10) - Rat Genome Database

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Gene: Epha10 (EPH receptor A10) Rattus norvegicus
Analyze
Symbol: Epha10
Name: EPH receptor A10
RGD ID: 1562679
Description: Predicted to enable transmembrane-ephrin receptor activity. Predicted to be involved in axon guidance; ephrin receptor signaling pathway; and protein phosphorylation. Predicted to be located in plasma membrane. Predicted to be active in dendrite. Orthologous to human EPHA10 (EPH receptor A10); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran; acetamide.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: ephrin type-A receptor 10; LOC298528; RGD1562679; similar to Ephrin type-A receptor 10
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.25137,139,588 - 137,175,637 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl5137,140,735 - 137,174,157 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx5139,844,289 - 139,878,891 (+)NCBIRnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.05141,614,303 - 141,648,896 (+)NCBIRnor_SHRSP
UTH_Rnor_WKY_Bbb_1.05141,621,479 - 141,656,077 (+)NCBIRnor_WKY
Rnor_6.05142,875,171 - 142,910,537 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5142,875,773 - 142,908,395 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.05146,645,808 - 146,680,199 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45144,228,301 - 144,248,902 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera5135,661,767 - 135,694,928 (+)NCBICelera
Cytogenetic Map5q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. GOA pipeline RGD automated data pipeline
3. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:15777695   PMID:23376485  


Genomics

Comparative Map Data
Epha10
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.25137,139,588 - 137,175,637 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl5137,140,735 - 137,174,157 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx5139,844,289 - 139,878,891 (+)NCBIRnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.05141,614,303 - 141,648,896 (+)NCBIRnor_SHRSP
UTH_Rnor_WKY_Bbb_1.05141,621,479 - 141,656,077 (+)NCBIRnor_WKY
Rnor_6.05142,875,171 - 142,910,537 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5142,875,773 - 142,908,395 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.05146,645,808 - 146,680,199 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45144,228,301 - 144,248,902 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera5135,661,767 - 135,694,928 (+)NCBICelera
Cytogenetic Map5q36NCBI
EPHA10
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38137,713,880 - 37,765,120 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl137,713,880 - 37,765,133 (-)EnsemblGRCh38hg38GRCh38
GRCh37138,181,648 - 38,230,792 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36137,954,233 - 38,003,411 (-)NCBINCBI36Build 36hg18NCBI36
Build 34137,895,050 - 37,899,882NCBI
Celera136,459,675 - 36,508,664 (-)NCBICelera
Cytogenetic Map1p34.3NCBI
HuRef136,298,901 - 36,347,866 (-)NCBIHuRef
CHM1_1138,297,768 - 38,346,680 (-)NCBICHM1_1
T2T-CHM13v2.0137,578,599 - 37,629,649 (-)NCBIT2T-CHM13v2.0
Epha10
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm394124,775,408 - 124,811,594 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl4124,774,692 - 124,811,593 (+)EnsemblGRCm39 Ensembl
GRCm384124,881,530 - 124,917,801 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl4124,880,899 - 124,917,800 (+)EnsemblGRCm38mm10GRCm38
MGSCv374124,559,029 - 124,563,752 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv364124,384,128 - 124,388,812 (+)NCBIMGSCv36mm8
Celera4123,204,101 - 123,208,828 (+)NCBICelera
Cytogenetic Map4D2.2NCBI
Epha10
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495545215,510,054 - 15,547,769 (-)NCBIChiLan1.0ChiLan1.0
EPHA10
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan11188,202,754 - 188,254,402 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0136,987,683 - 37,038,611 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1138,335,783 - 38,375,186 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl138,337,871 - 38,386,946 (-)Ensemblpanpan1.1panPan2
EPHA10
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1154,756,136 - 4,789,494 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha154,998,036 - 5,039,458 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0154,884,835 - 4,926,444 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl154,884,877 - 4,926,453 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1154,744,492 - 4,785,852 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0154,810,975 - 4,852,222 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0154,827,371 - 4,868,788 (+)NCBIUU_Cfam_GSD_1.0
Epha10
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505854,091,884 - 54,128,201 (-)NCBIHiC_Itri_2
SpeTri2.0NW_00493647419,916,666 - 19,935,958 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
EPHA10
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl693,765,128 - 93,803,894 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1693,764,732 - 93,804,069 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
EPHA10
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12095,094,971 - 95,145,264 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2095,098,283 - 95,142,863 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603321,664,826 - 21,712,734 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Epha10
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462476420,441,465 - 20,480,421 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Epha10
150 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:117
Count of miRNA genes:86
Interacting mature miRNAs:102
Transcripts:ENSRNOT00000056496, ENSRNOT00000075431
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1576314Eutr1Estrogen induced uterine response QTL 1uterus integrity trait (VT:0010575)pyometritis severity score (CMO:0002009)52138965166875058Rat
1641912Alcrsp18Alcohol response QTL 18response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)535189153141643988Rat
1549845Scl44Serum cholesterol level QTL 446blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)540128307148607290Rat
1578766Tcas11Tongue tumor susceptibility QTL 114.12tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)546711509161317411Rat
1576312Emca8Estrogen-induced mammary cancer QTL 84.1mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)550328551141643988Rat
61426Scl2Serum cholesterol level QTL 27.30.001blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)559793399143070159Rat
61393Bp7Blood pressure QTL 74.50.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)560293434161481680Rat
1354598Srn6Serum renin concentration QTL 63.8blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)569540295151018848Rat
1302790Scl20Serum cholesterol level QTL 206.40.0001blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)582394392166664054Rat
61452Ciaa5CIA Autoantibody QTL 53.5blood autoantibody amount (VT:0003725)calculated serum anti-rat type 2 collagen autoantibody titer (CMO:0001281)594858972143070159Rat
1331796Thshl2Thyroid stimulating hormone level QTL 22.3blood thyroid-stimulating hormone amount (VT:0005119)serum thyroid stimulating hormone level (CMO:0001248)597059760147465714Rat
1358187Emca1Estrogen-induced mammary cancer QTL 14.4mammary gland integrity trait (VT:0010552)post-insult time to mammary tumor formation (CMO:0000345)599216724148607142Rat
1578673Bmd13Bone mineral density QTL 134.9femur mineral mass (VT:0010011)trabecular volumetric bone mineral density (CMO:0001729)5103689353148689353Rat
2317056Wbc3White blood cell count QTL 32.510.01leukocyte quantity (VT:0000217)white blood cell count (CMO:0000027)5105999803150999803Rat
7207488Bss110Bone structure and strength QTL 18.4femur strength trait (VT:0010010)femur stiffness (CMO:0001674)5106906205151906205Rat
7207491Bss112Bone structure and strength QTL 1127femur morphology trait (VT:0000559)femur midshaft cortical cross-sectional area (CMO:0001663)5106906205151906205Rat
7207481Bss106Bone structure and strength QTL 1067.9femur strength trait (VT:0010010)femur ultimate force (CMO:0001675)5106906205151906205Rat
7207486Bss109Bone structure and strength QTL 109femur strength trait (VT:0010010)femur total energy absorbed before break (CMO:0001677)5106906205151906205Rat
1549838Bss4Bone structure and strength QTL 49.2femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)5106906205151906205Rat
1298089Scl14Serum cholesterol level QTL 145.80.0004blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)5108845856153845856Rat
1598847Cm62Cardiac mass QTL 623.4heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)5108845856153845856Rat
8657050Bw146Body weight QTL 14619.840.001body mass (VT:0001259)body weight gain (CMO:0000420)5108938288153938288Rat
8694441Bw169Body weight QTL 16917.610.001retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)5111416838156416838Rat
8694198Abfw3Abdominal fat weight QTL 316.130.001visceral adipose mass (VT:0010063)abdominal fat pad weight to body weight ratio (CMO:0000095)5111416838156416838Rat
8694389Bw160Body weight QTL 1606.170.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)5111416838156416838Rat
8552960Pigfal15Plasma insulin-like growth factor 1 level QTL 15blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)5111416838156416838Rat
1581510Cm54Cardiac mass QTL 543.40.05heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)5120740824143608494Rat
2293642Bss37Bone structure and strength QTL 374.640.0001femur strength trait (VT:0010010)femur ultimate force (CMO:0001675)5120740824151018848Rat
1641920Colcs1Colorectal carcinoma susceptibility QTL 12.990.0055intestine integrity trait (VT:0010554)benign colorectal tumor surface area measurement (CMO:0001799)5121846814166846814Rat
10053720Scort26Serum corticosterone level QTL 262.060.0147blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)5124965598166875058Rat
1300122Wbc1White blood cell count QTL 12.75leukocyte quantity (VT:0000217)total white blood cell count (CMO:0000365)5125392826139989768Rat
724525Bp147Blood pressure QTL 1474.30.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5126424772166875058Rat
1598819Bp292Blood pressure QTL 2924.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5127798274166875058Rat
1598861Cm64Cardiac mass QTL 642.9heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)5127798274166875058Rat
8552908Pigfal4Plasma insulin-like growth factor 1 level QTL 46.6blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)5128506074166875058Rat
8694169Bw148Body weight QTL 14850.001body mass (VT:0001259)body weight gain (CMO:0000420)5128506074166875058Rat
634349Bp139Blood pressure QTL 1390.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5128924607166875058Rat
1331803Rf32Renal function QTL 322.798kidney blood vessel physiology trait (VT:0100012)absolute change in renal vascular resistance (CMO:0001900)5129132428143070159Rat
70156Niddm30Non-insulin dependent diabetes mellitus QTL 303.98blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)5129132447151006154Rat
738018Anxrr4Anxiety related response QTL 45.1exploratory behavior trait (VT:0010471)percentage of entries into a discrete space in an experimental apparatus (CMO:0000961)5130130159166875058Rat
7794791Mcs33Mammary carcinoma susceptibility QTL 331.93mammary gland integrity trait (VT:0010552)mammary tumor incidence/prevalence measurement (CMO:0000946)5131345754166875058Rat
631505Bp103Blood pressure QTL 1033.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5132717196165560427Rat
7411722Strs6Sensitivity to stroke QTL 63.9cerebrum integrity trait (VT:0010549)percentage of study population developing cerebrovascular lesions during a period of time (CMO:0000932)5134972980138113556Rat
631562Apr2Acute phase response QTL 23.7blood murinoglobulin 1 amount (VT:0010597)plasma murinoglobulin 1 level (CMO:0001931)5135927956166875058Rat
61444Strs2Sensitivity to stroke QTL 24.7cerebrum integrity trait (VT:0010549)post-insult time to onset of cerebrovascular lesion (CMO:0002343)5135929696166875058Rat

Markers in Region
34.MMHAP10FRD10.seq  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.25137,140,800 - 137,140,908 (+)MAPPERmRatBN7.2
Rnor_6.05142,875,827 - 142,875,934NCBIRnor6.0
Rnor_5.05146,646,447 - 146,646,554UniSTSRnor5.0
Celera5135,661,911 - 135,662,018UniSTS
Cytogenetic Map5q36UniSTS
RH137663  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.25137,144,350 - 137,144,512 (+)MAPPERmRatBN7.2
Rnor_6.05142,879,376 - 142,879,537NCBIRnor6.0
Rnor_5.05146,649,996 - 146,650,157UniSTSRnor5.0
Celera5135,665,448 - 135,665,609UniSTS
RH 3.4 Map5890.7UniSTS
Cytogenetic Map5q36UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system appendage
High
Medium 21 1
Low 49 8
Below cutoff 2 7 1 10 1 3 3 4 20 1 3

Sequence


Reference Sequences
RefSeq Acc Id: ENSRNOT00000056496   ⟹   ENSRNOP00000053334
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl5137,140,735 - 137,174,157 (+)Ensembl
Rnor_6.0 Ensembl5142,875,773 - 142,908,395 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000082120   ⟹   ENSRNOP00000068718
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl5142,875,773 - 142,880,212 (+)Ensembl
RefSeq Acc Id: NM_001135709   ⟹   NP_001129181
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.25137,140,657 - 137,174,157 (+)NCBI
Rnor_6.05142,875,683 - 142,909,057 (+)NCBI
Rnor_5.05146,645,808 - 146,680,199 (+)NCBI
RGSC_v3.45144,228,301 - 144,248,902 (+)RGD
Celera5135,661,767 - 135,694,928 (+)RGD
Sequence:
RefSeq Acc Id: XM_006238858   ⟹   XP_006238920
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.25137,139,629 - 137,175,637 (+)NCBI
Rnor_6.05142,875,188 - 142,910,537 (+)NCBI
Rnor_5.05146,645,808 - 146,680,199 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017593293   ⟹   XP_017448782
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.25137,139,588 - 137,159,303 (+)NCBI
Rnor_6.05142,875,171 - 142,894,220 (+)NCBI
Sequence:
RefSeq Acc Id: XM_039109629   ⟹   XP_038965557
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.25137,139,625 - 137,175,637 (+)NCBI
RefSeq Acc Id: XM_039109630   ⟹   XP_038965558
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.25137,139,597 - 137,170,957 (+)NCBI
RefSeq Acc Id: XR_005504407
RefSeq Status:
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.25137,139,604 - 137,171,779 (+)NCBI
RefSeq Acc Id: XR_005504408
RefSeq Status:
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.25137,139,589 - 137,159,529 (+)NCBI
Reference Sequences
RefSeq Acc Id: NP_001129181   ⟸   NM_001135709
- Peptide Label: precursor
- Sequence:
RefSeq Acc Id: XP_006238920   ⟸   XM_006238858
- Peptide Label: isoform X2
- UniProtKB: F1LX55 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017448782   ⟸   XM_017593293
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: ENSRNOP00000068718   ⟸   ENSRNOT00000082120
RefSeq Acc Id: ENSRNOP00000053334   ⟸   ENSRNOT00000056496
RefSeq Acc Id: XP_038965558   ⟸   XM_039109630
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038965557   ⟸   XM_039109629
- Peptide Label: isoform X1
Protein Domains
Eph LBD   Fibronectin type-III   Protein kinase   SAM

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-F1LX55-F1-model_v2 AlphaFold F1LX55 1-1007 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1562679 AgrOrtholog
BioCyc Gene G2FUF-39945 BioCyc
Ensembl Genes ENSRNOG00000037340 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSRNOP00000053334.5 UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000056496.5 UniProtKB/TrEMBL
Gene3D-CATH 1.10.150.50 UniProtKB/TrEMBL
  2.60.40.10 UniProtKB/TrEMBL
  ephrin a2 ectodomain UniProtKB/TrEMBL
  Galactose-binding domain-like UniProtKB/TrEMBL
  Transferase(Phosphotransferase) domain 1 UniProtKB/TrEMBL
  Tumor Necrosis Factor Receptor, subunit A, domain 2 UniProtKB/TrEMBL
InterPro Eph_TM UniProtKB/TrEMBL
  Ephrin_rcpt_lig-bd_dom UniProtKB/TrEMBL
  Fibronectin_type3 UniProtKB/TrEMBL
  FN3_sf UniProtKB/TrEMBL
  Galactose-bd-like UniProtKB/TrEMBL
  Ig-like_fold UniProtKB/TrEMBL
  Kinase-like_dom UniProtKB/TrEMBL
  Prot_kinase_cat_dom UniProtKB/TrEMBL
  SAM UniProtKB/TrEMBL
  SAM_type UniProtKB/TrEMBL
  Ser-Thr/Tyr_kinase UniProtKB/TrEMBL
  Tyr_kinase_ephrin_rcpt UniProtKB/TrEMBL
  Tyr_kinase_rcpt_V_CS UniProtKB/TrEMBL
KEGG Report rno:298528 UniProtKB/TrEMBL
NCBI Gene 298528 ENTREZGENE
PANTHER EPH RECEPTOR A5 UniProtKB/TrEMBL
  EPHRIN TYPE-A RECEPTOR 10 UniProtKB/TrEMBL
Pfam EphA2_TM UniProtKB/TrEMBL
  Ephrin_lbd UniProtKB/TrEMBL
  fn3 UniProtKB/TrEMBL
  Pkinase_Tyr UniProtKB/TrEMBL
  SAM_2 UniProtKB/TrEMBL
PhenoGen Epha10 PhenoGen
PIRSF TyrPK_ephrin_receptor UniProtKB/TrEMBL
PRINTS TYRKINASE UniProtKB/TrEMBL
PROSITE EPH_LBD UniProtKB/TrEMBL
  FN3 UniProtKB/TrEMBL
  PROTEIN_KINASE_DOM UniProtKB/TrEMBL
  RECEPTOR_TYR_KIN_V_1 UniProtKB/TrEMBL
  RECEPTOR_TYR_KIN_V_2 UniProtKB/TrEMBL
  SAM_DOMAIN UniProtKB/TrEMBL
SMART EPH_lbd UniProtKB/TrEMBL
  Ephrin_rec_like UniProtKB/TrEMBL
  FN3 UniProtKB/TrEMBL
  SAM UniProtKB/TrEMBL
Superfamily-SCOP FN_III-like UniProtKB/TrEMBL
  Gal_bind_like UniProtKB/TrEMBL
  Kinase_like UniProtKB/TrEMBL
  SAM_homology UniProtKB/TrEMBL
UniProt F1LX55 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-12-01 Epha10  EPH receptor A10  RGD1562679  similar to Ephrin type-A receptor 10   Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 RGD1562679  similar to Ephrin type-A receptor 10   RGD1562679_predicted  similar to Ephrin type-A receptor 10 (predicted)  'predicted' is removed 2292626 APPROVED
2006-03-07 RGD1562679_predicted  similar to Ephrin type-A receptor 10 (predicted)  LOC298528  similar to Ephrin type-A receptor 10  Symbol and Name status set to approved 1299863 APPROVED
2006-02-09 LOC298528  similar to Ephrin type-A receptor 10      Symbol and Name status set to provisional 70820 PROVISIONAL