Gene: Cspg5 (chondroitin sulfate proteoglycan 5) Rattus norvegicus
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Symbol: Cspg5
Name: chondroitin sulfate proteoglycan 5
Description: Involved in axon regeneration; predicted to localize to several cellular components, including the GABA-ergic synapse, cytoplasm, and glutamatergic synapse; orthologous to human CSPG5 (chondroitin sulfate proteoglycan 5); INTERACTS WITH 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine; acrylamide.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: acidic leucine-rich EGF-like domain-containing brain protein; Caleb; chondroitin sulfate proteoglycan 5 (neuroglycan C); neuroglycan C; Ngc
Orthologs:
Homo sapiens (human) : CSPG5 (chondroitin sulfate proteoglycan 5)  HGNC  Alliance
Mus musculus (house mouse) : Cspg5 (chondroitin sulfate proteoglycan 5)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Cspg5 (chondroitin sulfate proteoglycan 5)
Pan paniscus (bonobo/pygmy chimpanzee) : CSPG5 (chondroitin sulfate proteoglycan 5)
Canis lupus familiaris (dog) : CSPG5 (chondroitin sulfate proteoglycan 5)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Cspg5 (chondroitin sulfate proteoglycan 5)
Sus scrofa (pig) : CSPG5 (chondroitin sulfate proteoglycan 5)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.08118,333,695 - 118,348,040 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.08117,686,012 - 117,699,639 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.48114,621,534 - 114,635,336 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.18114,640,987 - 114,654,786 (+)NCBI
Celera8109,507,895 - 109,521,130 (+)NCBICelera
Cytogenetic Map8q32NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Cspg5
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 2431
Created: 2000-05-25
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.