Anxrr25 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL: Anxrr25 (Anxiety related response QTL 25) Rattus norvegicus

Symbol: Anxrr25
Name: Anxiety related response QTL 25
RGD ID: 2313400
Also known as: Tame 2
Trait: aggression-related behavior trait   (VT:0015014)    
Measurement Type: tameness/aggressiveness composite score   (CMO:0002136)    
LOD Score: Not Available
P Value: Not Available
Variance: 2.3
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2889,265,192 - 114,019,816RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0895,963,141 - 122,354,314RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0895,458,335 - 121,667,168RGDRnor5.0
RGSC_v3.4893,585,899 - 118,725,315RGDRGSC3.4
Cross Type: intercross
Strains Crossed: Wild/Nov 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Vertebrate Trait

Rat Strain
Wild/Nov  (IEA)

References

References - curated
1. Albert FW, etal., Genetics. 2009 Jun;182(2):541-54. Epub 2009 Apr 10.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
61956Nt5e5' nucleotidase, ecto88927104689314918Rat
1310921Snx14sorting nexin 1488928367389390597Rat
40975236LOC120094311myosin light polypeptide 6-like88934159489343144Rat
1305683Syncripsynaptotagmin binding, cytoplasmic RNA interacting protein88940248789435517Rat
6500498LOC100910069uncharacterized LOC10091006988946979889496534Rat
41182834LOC120094450small nucleolar RNA SNORD5088947028589470356Rat
2302581Zfp949zinc finger protein 94988952298189548015Rat
1561074Trim43atripartite motif-containing 43A88956256889568716Rat
41365500LOC120094222uncharacterized LOC12009422288957341989578383Rat
41224969LOC120094451small nucleolar RNA SNORD5088957595789576028Rat
1560775RGD1560775similar to RIKEN cDNA 4930579C12 gene88960339389716767Rat
620621Bcl2a1BCL2-related protein A188971691489724998Rat
1306876Mthfsmethenyltetrahydrofolate synthetase88972949889801998Rat
7752226LOC10254643840S ribosomal protein S16-like88973512489735589Rat
41399050LOC120094223uncharacterized LOC12009422388984564389877107Rat
41218560LOC120094478small nucleolar RNA SNORA4889002075390020894Rat
41382728NEWGENE_40926764transfer RNA proline (anticodon AGG)89003406090034140Rat
11358086LOC108351761uncharacterized LOC10835176189003474090038456Rat
1591930Minar1membrane integral NOTCH2 associated receptor 189013737490169152Rat
1303327Tmed3transmembrane p24 trafficking protein 389024151690249429Rat
1305403Ankrd34cankyrin repeat domain 34C89027126490281759Rat
2325559Mir184microRNA 18489034313490343210Rat
620395Rasgrf1RAS protein-specific guanine nucleotide-releasing factor 189044515490574274Rat
41095375LOC120094224uncharacterized LOC12009422489057670990583532Rat
11504777LOC108351762inositol polyphosphate multikinase pseudogene89058569790587110Rat
7644553LOC10254703740S ribosomal protein S24-like89059280290593237Rat
41175925LOC120094225uncharacterized LOC12009422589060277390606208Rat
2447Ctshcathepsin H89060894190627824Rat
1307938Morf4l1mortality factor 4 like 189064298890664518Rat
41210805NEWGENE_6576126transfer RNA lysine (anticodon CUU)89067387490673946Rat
1306713Adamts7ADAM metallopeptidase with thrombospondin type 1 motif, 789070472790744331Rat
1307436Tbc1d2bTBC1 domain family, member 2B89074622090814867Rat
620110Zic1Zic family member 189190854891918020Rat
1307298Zic4Zic family member 489192973591935368Rat
41196387NEWGENE_40934091transfer RNA alanine (anticodon AGC)89201907692019150Rat
1584689LOC681055similar to transcriptional adaptor 3-like89228788992291715Rat
1564500Plscr5phospholipid scramblase family, member 589271747992741436Rat
620521Plscr1phospholipid scramblase 189278427992804698Rat
41193674LOC120094226uncharacterized LOC12009422689278450392788684Rat
1359107Plscr2phospholipid scramblase 289280942292845947Rat
7575278LOC102551265phospholipid scramblase 1-like89286046592903695Rat
41344451LOC120094227uncharacterized LOC12009422789298639493017829Rat
1311693Plscr4phospholipid scramblase 489298729093026056Rat
41403003LOC120094505small nucleolar RNA SNORA1789306119193061321Rat
41295749LOC12009422860S ribosomal protein L39-like89307587493077017Rat
3353Plod2procollagen lysine, 2-oxoglutarate 5-dioxygenase 289308454893167255Rat
1591998LOC367140similar to Heterogeneous nuclear ribonucleoprotein A1 (Helix-destabilizing protein) (Single-strand RNA-binding protein) (hnRNP core protein A1) (HDP)89320837693214852Rat
41308155LOC120094229uncharacterized LOC12009422989324345093250949Rat
1598029LOC681243similar to Aldose reductase-related protein 2 (AR) (Aldehyde reductase) (Fibroblast growth factor regulated protein) (FR-1 protein)89327745793311293Rat
1591997LOC367141similar to 40S ribosomal protein SA (p40) (34/67 kDa laminin receptor)89331143993316261Rat
11471749LOC108351854glyceraldehyde-3-phosphate dehydrogenase pseudogene89336940193370460Rat
11434961LOC108351767uncharacterized LOC10835176789342899693472926Rat
41266392LOC12009439640S ribosomal protein S24-like89372844393732999Rat
1597977LOC681297similar to VNACHT, leucine rich repeat and PYD containing 4C89385776593859240Rat
41120561LOC120094230uncharacterized LOC12009423089467964294691218Rat
41253589LOC120094438U1 spliceosomal RNA89485466394854822Rat
1309079Dipk2adivergent protein kinase domain 2A89507069595089815Rat
41074420LOC120094425U6 spliceosomal RNA89520675995206858Rat
41335409LOC120094347uncharacterized LOC12009434789521056495212960Rat
1560736Slc9a9solute carrier family 9 member A989523288995797262Rat
41376448LOC120094348uncharacterized LOC12009434889575658695787645Rat
7636607LOC102553663uncharacterized LOC10255366389580993895864911Rat
7591571LOC102553774uncharacterized LOC10255377489590977095926319Rat
1306988Chst2carbohydrate sulfotransferase 289596006795965803Rat
9120336LOC103690451rRNA-processing protein FCF1 homolog pseudogene89597941995980001Rat
1307882U2surpU2 snRNP-associated SURP domain containing89601893296075795Rat
41137774LOC120094231uncharacterized LOC12009423189610152196102430Rat
1311515Paqr9progestin and adipoQ receptor family member 989611424996116546Rat
1560610LOC501038Ab2-06089611947896128734Rat
1595195PCOLCE2procollagen C-endopeptidase enhancer 289619346196251116Rat
41343926LOC120094312inosine triphosphate pyrophosphatase-like89623120296231933Rat
619783Trpc1transient receptor potential cation channel, subfamily C, member 189626332296314197Rat
1307142Pls1plastin 189631670396426592Rat
41150068LOC120094233uncharacterized LOC12009423389631837696320168Rat
41319771LOC120094232uncharacterized LOC12009423289639074396394821Rat
1305796AtrATR serine/threonine kinase89642670496524152Rat
41015759LOC120094234uncharacterized LOC12009423489650656296511534Rat
1309713Xrn15'-3' exoribonuclease 189652787196637385Rat
1311223Gk5glycerol kinase 589668246996751407Rat
1305814Tfdp2transcription factor Dp-289676045996901466Rat
41189447LOC120094235uncharacterized LOC12009423589678980796826801Rat
41108117LOC120094461small nucleolar RNA SNORA4489678999796790110Rat
7748306LOC10255073460S ribosomal protein L31-like89687558996876088Rat
2172Atp1b3ATPase Na+/K+ transporting subunit beta 389691026596941592Rat
1597741LOC685141similar to ubiquitin-conjugating enzyme E2 variant 189697720796977880Rat
1311048Rnf7ring finger protein 789703884597048080Rat
7718778LOC102551788uncharacterized LOC10255178889705363797097529Rat
41163910LOC120094236uncharacterized LOC12009423689706750797073580Rat
41270716LOC120094237uncharacterized LOC12009423789709657797097660Rat
3538Rasa2RAS p21 protein activator 289711998397236687Rat
1310136Zbtb38zinc finger and BTB domain containing 3889728461797288518Rat
6502759LOC100909637uncharacterized LOC10090963789729606897308537Rat
41034512LOC120094238uncharacterized LOC12009423889737133497393721Rat
1359617Pxylp12-phosphoxylose phosphatase 189741976697485163Rat
41163201LOC120094379uncharacterized LOC12009437989749130997494993Rat
1562307Spsb4splA/ryanodine receptor domain and SOCS box containing 489753651997609757Rat
1561847RGD1561847similar to BAX protein, cytoplasmic isoform delta89764651097647102Rat
1591928Slc25a36solute carrier family 25 member 3689765984897693735Rat
2318277LOC10036581040S ribosomal protein S17-like89778529097785768Rat
1359699Trim42tripartite motif-containing 4289790234997923268Rat
41055522LOC120094487small nucleolar RNA SNORA1789801567098015799Rat
621151Clstn2calsyntenin 289802040698637232Rat
41216811LOC120094406U6 spliceosomal RNA89819226898192358Rat
1309140Nmnat3nicotinamide nucleotide adenylyltransferase 389889216899003912Rat
3543Rbp1retinol binding protein 189902521899046740Rat
3544Rbp2retinol binding protein 289907929399104489Rat
1565403RGD1565403similar to Nucleoside diphosphate kinase B (NDK B) (NDP kinase B) (P18)89912333299123801Rat
628746Copb2COPI coat complex subunit beta 289916132499183452Rat
1585674Mrps22mitochondrial ribosomal protein S2289918411099197278Rat
1591440Prr23aproline rich 23A89942037199425655Rat
1591431Prr23d2proline rich 23 domain containing 289943846299439491Rat
1591417LOC684395hypothetical protein LOC68439589944646199447356Rat
1592646Prr23d1proline rich 23 domain containing 189947146299476735Rat
7499445LOC102547261uncharacterized LOC10254726189950782299512467Rat
1310041Foxl2forkhead box L289951297199514500Rat
620572FaimFas apoptotic inhibitory molecule89954387799569499Rat
735201Cxadrl1coxsackie virus and adenovirus receptor-like 189956541799592658Rat
620917Pik3cbphosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit beta89959460099699772Rat
2319586LOC100365188hypothetical LOC10036518889978179699784781Rat
1590301LOC684466similar to Fas apoptotic inhibitory molecule 1 (rFAIM)89979184999810206Rat
1561486Cep70centrosomal protein 7089981027099863279Rat
41103848LOC120094313dnaJ homolog subfamily C member 8-like89983022999831087Rat
41117766LOC120094239uncharacterized LOC12009423989983746299839020Rat
1561304Esyt3extended synaptotagmin 389987041899917298Rat
3111Mrasmuscle RAS oncogene homolog899944036100006771Rat
1564871Nme9NME/NM23 family member 98100013190100034511Rat
1310477Armc8armadillo repeat containing 88100036946100131544Rat
41067249LOC120094240uncharacterized LOC1200942408100133210100138944Rat
1598038Dbr1debranching RNA lariats 18100139039100150768Rat
1590210A4gntalpha-1,4-N-acetylglucosaminyltransferase8100172038100179218Rat
1311430Dzip1lDAZ interacting zinc finger protein 1-like8100188414100229077Rat
1359696Cldn18claudin 188100246499100265797Rat
41110049LOC120094486small nucleolar RNA SNORA178100298555100298686Rat
1309654Sox14SRY-box transcription factor 148100421982100423918Rat
40991928LOC120094517small nucleolar RNA SNORA178100473463100473596Rat
1564597RGD1564597similar to 40S ribosomal protein S258100574838100576990Rat
1591996LOC367154similar to proteasome beta 4 subunit8100922809100923699Rat
41187373LOC120094241uncharacterized LOC1200942418100974094100974966Rat
1566151Il20rbinterleukin 20 receptor subunit beta8100979085101010829Rat
1310688Nck1NCK adaptor protein 18101018610101079237Rat
1306109Slc35g2solute carrier family 35, member G28101085576101113366Rat
41313684LOC120094380uncharacterized LOC1200943808101141510101144662Rat
1310744Stag1stromal antigen 18101179039101564684Rat
41317709LOC12009424360S ribosomal protein L19-like8101584172101590537Rat
3265Pccbpropionyl-CoA carboxylase subunit beta8101591218101641213Rat
1310355Msl2MSL complex subunit 28101676605101702818Rat
1306958Ppp2r3aprotein phosphatase 2, regulatory subunit B'', alpha8101703512101841530Rat
7686411LOC102548692uncharacterized LOC1025486928101719779101787868Rat
41380325LOC120094496small nucleolar RNA SNORA178101976979101977111Rat
11361279LOC108351773uncharacterized LOC1083517738101986234102002203Rat
2556Ephb1Eph receptor B18102507549102944839Rat
1305407Kykyphoscoliosis peptidase8103086630103126305Rat
41111708LOC12009438160S ribosomal protein L27-like8103138302103138924Rat
1561183Cep63centrosomal protein 638103162639103214177Rat
1583270Anapc13anaphase promoting complex subunit 138103205520103213936Rat
70977Amotl2angiomotin like 28103303368103319161Rat
620549Rykreceptor-like tyrosine kinase8103419348103492083Rat
41362050LOC120094244uncharacterized LOC1200942448103527454103543751Rat
3051Slco2a1solute carrier organic anion transporter family, member 2a18103588916103672546Rat
41348082LOC120094519small nucleolar RNA SNORA178103607316103607440Rat
41347624LOC120094245uncharacterized LOC1200942458103683046103691110Rat
1309958Rab6bRAB6B, member RAS oncogene family8103695328103764023Rat
1304698SrprbSRP receptor subunit beta8103768685103782632Rat
3845Tftransferrin8103789780103816487Rat
41075259LOC120094246uncharacterized LOC1200942468103793542103795438Rat
41361285LOC120094247uncharacterized LOC1200942478103826885103829663Rat
1310507RGD1310507similar to RIKEN cDNA 1300017J028103836846103874980Rat
1562949Topbp1DNA topoisomerase II binding protein 18103887805103931662Rat
1359113Cdv3CDV3 homolog8103934006103947173Rat
7715370LOC102550105uncharacterized LOC1025501058103953302103967686Rat
1591927Bfsp2beaded filament structural protein 28104006226104063399Rat
1311530Tmem108transmembrane protein 1088104066081104360172Rat
41062204LOC120094248SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-like8104258115104259349Rat
7512575LOC102550471uncharacterized LOC1025504718104397919104405607Rat
1591994Rpl27-ps1ribosomal protein L27, pseudogene 18104497134104497579Rat
41111408LOC120094250uncharacterized LOC1200942508104557812104583967Rat
1563856Nphp3nephrocystin 38104621908104662383Rat
1311702Uba5ubiquitin-like modifier activating enzyme 58104665241104680850Rat
1306270Acad11acyl-CoA dehydrogenase family, member 118104681346104746559Rat
1596453Ackr4atypical chemokine receptor 48104716537104720972Rat
41233547LOC120094252uncharacterized LOC1200942528104757449104772885Rat
1308046Dnajc13DnaJ heat shock protein family (Hsp40) member C138104767785104877317Rat
41172118LOC120094251uncharacterized LOC1200942518104851569104853202Rat
2023Acp3acid phosphatase 38104905570104956146Rat
11503015Trnac-gca31transfer RNA cysteine (anticodon GCA) 318105020043105020114Rat
11519997Trnae-uuc4transfer RNA glutamic acid (anticodon UUC) 48105028879105028950Rat
40980385LOC120094513small nucleolar RNA SNORA178105100538105100654Rat
1591993LOC367159similar to ribosomal protein S118105114531105115646Rat
1308844Cpne4copine 48105177376105653075Rat
1306391Mrpl3mitochondrial ribosomal protein L38105670184105693544Rat
1311387Nudt16nudix hydrolase 168105739927105741982Rat
1584138LOC688828similar to Nucleoside diphosphate-linked moiety X motif 16 (Nudix motif 16)8105754821105756548Rat
1308801Nek11NIMA-related kinase 118105767230106026676Rat
7489031Mir6330microRNA 63308105784904105785042Rat
7577342LOC102551727spermine synthase-like8105964464105968641Rat
1304643Aste1asteroid homolog 18106026570106044694Rat
621311Atp2c1ATPase secretory pathway Ca2+ transporting 18106034777106155854Rat
7604621LOC102551490DNA-(apurinic or apyrimidinic site) lyase 2-like8106072038106074709Rat
1560844RGD1560844similar to 60S ribosomal protein L29 (P23)8106177818106178267Rat
41341470LOC1200944005S ribosomal RNA8106210563106210681Rat
1311809Pik3r4phosphoinositide-3-kinase, regulatory subunit 48106267908106316585Rat
1309172Col6a6collagen type VI alpha 6 chain8106318010106473419Rat
1565804Col6a5collagen type VI alpha 5 chain8106483806106584114Rat
41037238NEWGENE_40940579transfer RNA leucine (anticodon AAG)8106522331106522405Rat
41029309LOC120094253uncharacterized LOC1200942538106577908106586128Rat
1564060Col6a4collagen, type VI, alpha 48106617169106733499Rat
41380564LOC12009438260S ribosomal protein L6-like8106759114106761529Rat
1591498Glyctkglycerate kinase8106795461106802675Rat
1584269Wdr82WD repeat domain 828106814569106834535Rat
9685094Mirlet7gmicroRNA let-7g8106822293106822380Rat
1584266Ppm1mprotein phosphatase, Mg2+/Mn2+ dependent, 1M8106836221106843472Rat
1591460Twf2twinfilin actin-binding protein 28106845253106858298Rat
631352Tlr9toll-like receptor 98106864680106868796Rat
68392Alas15'-aminolevulinate synthase 18106876514106889852Rat
7668152LOC102549759uncharacterized LOC1025497598106889998106896411Rat
1565004Poc1aPOC1 centriolar protein A8106922058106991678Rat
40974940LOC120094254uncharacterized LOC1200942548106952559106969689Rat
735026Dusp7dual specificity phosphatase 78107009369107016404Rat
62069Rpl29ribosomal protein L298107068929107070963Rat
2030Acy1aminoacylase 18107072354107077756Rat
1309721Abhd14aabhydrolase domain containing 14A8107079139107089004Rat
1359649Abhd14babhydrolase domain containing 14b8107087157107092122Rat
1307910Pcbp4poly(rC) binding protein 48107092688107103276Rat
1560166Gpr62G protein-coupled receptor 628107103277107108056Rat
1305189Parp3poly (ADP-ribose) polymerase family, member 38107111010107117073Rat
1307881Rrp9ribosomal RNA processing 9, U3 small nucleolar RNA binding protein8107116411107126123Rat
1565640Iqcf1IQ motif containing F18107129462107133242Rat
1560754Iqcf5IQ motif containing F58107151477107152862Rat
1565277Iqcf3IQ motif containing F38107163067107198028Rat
7631233LOC102550160IQ domain-containing protein F5-like8107206402107208677Rat
1562645Iqcf6IQ motif containing F68107263654107264665Rat
40978404NEWGENE_40938314transfer RNA serine (anticodon AGA)8107275614107275688Rat
2743Grm2glutamate metabotropic receptor 28107280099107293159Rat
1359353Tex264testis expressed 2648107295806107322858Rat
1561889Rad54l2RAD54 like 28107324945107427033Rat
1593469LOC689395hypothetical protein LOC6893958107440411107448210Rat
1305176Dcaf1DDB1 and CUL4 associated factor 18107466229107540633Rat
1307252Manfmesencephalic astrocyte-derived neurotrophic factor8107500856107551595Rat
1305937Rbm15bRNA binding motif protein 15B8107543542107548195Rat
1306677Dock3dedicator of cyto-kinesis 38107552462107903527Rat
41314406LOC120094488small nucleolar RNA SNORA178107838468107838598Rat
7507784LOC102550698bleomycin hydrolase-like8107847016107857956Rat
41160440LOC120094255uncharacterized LOC1200942558107847772107858096Rat
1304980Mapkapk3MAPK activated protein kinase 38107929754107963638Rat
41391883LOC12009425640S ribosomal protein SA-like8107966999107970488Rat
69261Cishcytokine inducible SH2-containing protein8107972306107977254Rat
1308293Hemk1HemK methyltransferase family member 18107999658108010732Rat
1307461RGD1307461similar to RIKEN cDNA 6430571L13 gene; similar to g20 protein8108012638108022050Rat
41121994LOC120094257uncharacterized LOC1200942578108036565108046999Rat
631360Cacna2d2calcium voltage-gated channel auxiliary subunit alpha2delta 28108072208108203516Rat
41184370LOC120094259uncharacterized LOC1200942598108184284108207504Rat
1310540Tmem115transmembrane protein 1158108207463108212327Rat
1359644Cyb561d2cytochrome b561 family, member D28108213201108215778Rat
1308927Nprl2NPR2-like, GATOR1 complex subunit8108215823108218996Rat
1303250Zmynd10zinc finger, MYND-type containing 108108220386108224745Rat
1359383Rassf1Ras association domain family member 18108225023108236164Rat
41301502LOC120094258uncharacterized LOC1200942588108236830108241754Rat
1561664Tusc2tumor suppressor 2, mitochondrial calcium regulator8108236838108240056Rat
620321Hyal2hyaluronidase 28108241895108246853Rat
1303060Hyal1hyaluronidase 18108250654108254526Rat
6496422Naa80N(alpha)-acetyltransferase 80, NatH catalytic subunit8108254314108257564Rat
1303334Hyal3hyaluronidase 38108254385108260020Rat
1310222Ifrd2interferon-related developmental regulator 28108260969108266191Rat
1589957Lsmem2leucine-rich single-pass membrane protein 28108265855108270656Rat
1310079Sema3bsemaphorin 3B8108271663108280326Rat
41293752LOC120094260uncharacterized LOC1200942608108280472108288983Rat
620243Gnai2G protein subunit alpha i28108288401108309009Rat
628620Slc38a3solute carrier family 38, member 38108323889108339959Rat
41004808LOC120094261uncharacterized LOC1200942618108340323108341775Rat
1304683Gnat1G protein subunit alpha transducin 18108350935108355671Rat
1308514Sema3fsemaphorin 3F8108357629108387083Rat
1305059Rbm5RNA binding motif protein 58108420220108449481Rat
1560367Rbm6RNA binding motif protein 68108452687108552783Rat
1588858LOC688430similar to Cofilin-1 (Cofilin, non-muscle isoform)8108489949108491597Rat
40983521NEWGENE_40926764transfer RNA proline (anticodon AGG)8108555963108556043Rat
9083580LOC103690459PCNA-associated factor pseudogene8108560971108561724Rat
1308823Mon1aMON1 homolog A, secretory trafficking associated8108574272108593163Rat
1306465Mst1rmacrophage stimulating 1 receptor8108596100108611389Rat
1310036Actl11actin-like 118108619143108622836Rat
621488CamkvCaM kinase-like vesicle-associated8108626821108641169Rat
1309761TraipTRAF-interacting protein8108641860108661640Rat
1308323Uba7ubiquitin-like modifier activating enzyme 78108665289108674099Rat
1560778Inka1inka box actin regulator 18108674263108675953Rat
1306603Cdhr4cadherin-related family member 48108682594108690358Rat
71025Ip6k1inositol hexakisphosphate kinase 18108693068108737278Rat
1560458GmppbGDP-mannose pyrophosphorylase B8108737429108767286Rat
2301394Rnf123ring finger protein 1238108740176108768177Rat
631413Amigo3adhesion molecule with Ig like domain 38108741899108743425Rat
3114Mst1macrophage stimulating 18108767886108773425Rat
2125Apehacylaminoacyl-peptide hydrolase8108773791108782903Rat
2223Bsnbassoon (presynaptic cytomatrix protein)8108784849108875819Rat
621890Dag1dystroglycan 18108890926108955611Rat
1589574Nicn1nicolin 18108976393108981620Rat
1359408Amtaminomethyltransferase8108981620108988127Rat
1359333TctaT-cell leukemia translocation altered8108988588108992324Rat
619921Rhoaras homolog family member A8108991926109025746Rat
2729Gpx1glutathione peroxidase 18109026905109028031Rat
1587387Usp4ubiquitin specific peptidase 48109035402109080427Rat
1589651LOC498675hypothetical LOC4986758109080032109084650Rat
1596869Iho1interactor of HORMAD1 18109091134109126386Rat
41072813LOC120094445small nucleolar RNA SNORA708109122676109122795Rat
1596842LOC680045hypothetical protein LOC6800458109131138109140784Rat
1359445Klhdc8bkelch domain containing 8B8109141594109146584Rat
1566341Ccdc71coiled-coil domain containing 718109146650109161749Rat
2988Lamb2laminin subunit beta 28109178367109190552Rat
1303276Usp19ubiquitin specific peptidase 198109190727109201761Rat
1359448Qars1glutaminyl-tRNA synthetase 18109207705109215738Rat
1311095Qrich1glutamine-rich 18109216900109256472Rat
735092Impdh2inosine monophosphate dehydrogenase 28109256705109261365Rat
708545Ndufaf3NADH:ubiquinone oxidoreductase complex assembly factor 38109261362109263194Rat
4888532Mir3555microRNA 35558109264082109264201Rat
2325556Mir191microRNA 1918109264098109264188Rat
1359206Dalrd3DALR anticodon binding domain containing 38109264100109268560Rat
2325499Mir425microRNA 4258109264555109264637Rat
1307649Wdr6WD repeat domain 68109268079109274504Rat
1311848P4htmprolyl 4-hydroxylase, transmembrane8109274629109292802Rat
1305839Arih2ariadne RBR E3 ubiquitin protein ligase 28109296738109355909Rat
621443Slc25a20solute carrier family 25 member 208109365056109386512Rat
41078999LOC120094262uncharacterized LOC1200942628109375850109380420Rat
1587097LOC679586similar to ATP synthase, H+ transporting, mitochondrial Fo complex, subunit G8109388024109388720Rat
3393Prkar2aprotein kinase cAMP-dependent type II regulatory subunit alpha8109393189109458832Rat
620529Ip6k2inositol hexakisphosphate kinase 28109483843109510172Rat
41252013LOC120094456small nucleolar RNA SNORA288109498568109498716Rat
1311323NckipsdNCK interacting protein with SH3 domain8109511484109522625Rat
621787Celsr3cadherin, EGF LAG seven-pass G-type receptor 38109530597109558360Rat
1310197Slc26a6solute carrier family 26 member 68109558968109569778Rat
1564575Tmem89transmembrane protein 898109571377109572271Rat
41174088LOC120094532U2 spliceosomal RNA8109572435109572608Rat
1303314Uqcrc1ubiquinol-cytochrome c reductase core protein 18109589735109601481Rat
1311417Col7a1collagen type VII alpha 1 chain8109604877109637252Rat
2325468Mir711microRNA 7118109621975109622042Rat
620765Ucn2urocortin 28109637624109639173Rat
3310Pfkfb46-phosphofructo-2-kinase/fructose-2,6-biphosphatase 48109643558109687006Rat
6491791LOC100911671uncharacterized LOC1009116718109688334109691452Rat
1359661Shisa5shisa family member 58109691476109706409Rat
1311998Trex1three prime repair exonuclease 18109706613109707913Rat
1626390AtripATR interacting protein8109708440109722511Rat
1311466Ccdc51coiled-coil domain containing 518109722595109741478Rat
41374875LOC120094504U2 spliceosomal RNA8109725791109725993Rat
1584795Tma7translation machinery associated 7 homolog8109726213109730902Rat
1310564Plxnb1plexin B18109743470109769153Rat
1307859Fbxw12F-box and WD repeat domain containing 128109782315109802086Rat
1307150Spink8serine peptidase inhibitor, Kazal type 88109814062109828994Rat
61896Nme6NME/NM23 nucleoside diphosphate kinase 68109832085109839301Rat
1559878Campcathelicidin antimicrobial peptide8109841729109843543Rat
621498Cdc25acell division cycle 25A8109864356109882734Rat
1564359Map4microtubule-associated protein 48109925233110064370Rat
1308888Dhx30DExH-box helicase 308110064751110096954Rat
41101567LOC120094467small nucleolar RNA SNORA438110101179110101316Rat
1304850Smarcc1SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 18110111097110214727Rat
2431Cspg5chondroitin sulfate proteoglycan 58110220653110234750Rat
1563705RGD1563705similar to ribosomal protein S238110265306110265813Rat
1305478Elp6elongator acetyltransferase complex subunit 68110280059110295070Rat
1309378ScapSREBF chaperone8110306031110360677Rat
619892Ptpn23protein tyrosine phosphatase, non-receptor type 238110360804110383271Rat
1308994Ngpneutrophilic granule protein8110394173110397571Rat
1310570Klhl18kelch-like family member 188110400679110459442Rat
1565187Kif9kinesin family member 98110459467110504492Rat
41004169LOC120094263uncharacterized LOC1200942638110506998110511552Rat
1305576Setd2SET domain containing 2, histone lysine methyltransferase8110511808110597489Rat
708524Nraddneurotrophin receptor associated death domain8110599667110603068Rat
1306501Nbeal2neurobeachin-like 28110603220110633612Rat
1306081Ccdc12coiled-coil domain containing 128110635276110686417Rat
3442Pth1rparathyroid hormone 1 receptor8110693910110725458Rat
3142Myl3myosin light chain 38110738669110744814Rat
1562548Prss42serine protease 428110772748110777947Rat
1560940Prss44serine protease 448110791657110805303Rat
40957483LOC120094264uncharacterized LOC1200942648110796890110799977Rat
9187567LOC103690462serine protease 44-like8110807500110811975Rat
2321330LOC100360828cAMP-regulated phosphoprotein 19-like8110813563110813983Rat
1303021Prss45serine protease 458110820324110825862Rat
1302970Prss46protease, serine, 468110829266110841066Rat
6499372Prss50serine protease 508110842525110848855Rat
1562523Tmietransmembrane inner ear8110849713110864803Rat
41271941LOC120094265uncharacterized LOC1200942658110857773110860100Rat
1305208Als2clALS2 C-terminal like8110863753110884434Rat
7555836Fam240afamily with sequence similarity 240 member A8110894878110908686Rat
1564138RGD1564138similar to 60S ribosomal protein L29 (P23)8110916113110924626Rat
1594185Tdgf1teratocarcinoma-derived growth factor 18110924774110938545Rat
1311716Lrrc2leucine rich repeat containing 28110936119110969189Rat
1310546Rtp3receptor (chemosensory) transporter protein 38110970154110975000Rat
1565653RGD1565653similar to transcription elongation factor B (SIII), polypeptide 28110990032110995705Rat
1305445Ltflactotransferrin8110999948111022795Rat
41072310LOC120094267uncharacterized LOC1200942678111025653111029674Rat
1311811Ccrl2C-C motif chemokine receptor like 28111034279111036914Rat
40965793LOC120094432U7 small nuclear RNA8111052897111052957Rat
41170133LOC120094383uncharacterized LOC1200943838111063865111065046Rat
7664686LOC102556485uncharacterized LOC1025564858111087634111091439Rat
1306234Lrrfip2LRR binding FLII interacting protein 28111091453111193947Rat
620937Mlh1mutL homolog 18111196468111233721Rat
1310977Epm2aip1EPM2A interacting protein 18111233871111241219Rat
1563130Trank1tetratricopeptide repeat and ankyrin repeat containing 18111275973111355491Rat
41215188LOC120094533U2 spliceosomal RNA8111280620111280798Rat
1309232Dclk3doublecortin-like kinase 38111401544111453999Rat
1305745StacSH3 and cysteine rich domain8111530800111653228Rat
41049209LOC120094268uncharacterized LOC1200942688111809095111816388Rat
1593239Arpp21cAMP regulated phosphoprotein 218112034636112199273Rat
41098352LOC120094270uncharacterized LOC1200942708112068343112079103Rat
7489034Mir128-2microRNA 128-28112085467112085550Rat
41234269LOC120094269uncharacterized LOC1200942698112086567112089724Rat
41357920LOC120094384uncharacterized LOC1200943848112317318112320269Rat
41220769LOC120094385glyceraldehyde-3-phosphate dehydrogenase-like8112339150112340147Rat
41104772LOC120094512small nucleolar RNA SNORA178112478560112478673Rat
9234302LOC103690464uncharacterized LOC1036904648112597040112642805Rat
41100052NEWGENE_40934091transfer RNA alanine (anticodon AGC)8112763890112763974Rat
2320736LOC100361124selection and upkeep of intraepithelial T cells 1-like8112840716112841470Rat
40975319LOC120094386uncharacterized LOC1200943868112976474112977512Rat
7545262LOC102553940uncharacterized LOC1025539408113033104113051792Rat
7610822LOC102554058uncharacterized LOC1025540588113128960113137339Rat
7501656LOC102554003uncharacterized LOC1025540038113170377113194795Rat
41143523LOC120094271uncharacterized LOC1200942718113181946113186562Rat
41388075LOC120094272uncharacterized LOC1200942728113250732113254017Rat
41347543LOC120094273uncharacterized LOC1200942738113375472113393264Rat
40987280LOC120094274uncharacterized LOC1200942748113479098113516776Rat
68357Pdcd6ipprogrammed cell death 6 interacting protein8113590998113646795Rat
6498658LOC100910424uncharacterized LOC1009104248113645861113650490Rat
619789Clasp2cytoplasmic linker associated protein 28113677345113859957Rat
41186188LOC120094275uncharacterized LOC1200942758113858373113862928Rat
41343709LOC120094276uncharacterized LOC1200942768113868982113869740Rat
1564700Ubp1upstream binding protein 18113869771113915625Rat
1562243Fbxl2F-box and leucine-rich repeat protein 28113916660113965137Rat
1561132Susd5sushi domain containing 58113996771114036133Rat
41307598LOC120094403U6 spliceosomal RNA8113999835113999934Rat
7740190LOC102554690COP9 signalosome complex subunit 7b-like8113955342113956371Rat
6485805LOC100912766mitochondrial import receptor subunit TOM7 homolog89088964590890841Rat
7503624LOC102550510uncharacterized LOC10255051089279782992809410Rat
7751313LOC102551814uncharacterized LOC10255181489319373693205500Rat
11364685LOC108351768uncharacterized LOC10835176889381359193839203Rat
7742486LOC102552709uncharacterized LOC10255270989511609195128967Rat
9189460LOC103690449uncharacterized LOC10369044989516298995166157Rat
7608024LOC102552777uncharacterized LOC10255277789521307495231913Rat
7659838LOC102550159BCL2/adenovirus E1B 19 kDa protein-interacting protein 3-like89646485896465381Rat
7579406LOC102550837ATP synthase F(0) complex subunit B1, mitochondrial-like89683640696837758Rat
9420290LOC103690484peptidyl-prolyl cis-trans isomerase D pseudogene89717968997180610Rat
40929302LOC120094534U2 spliceosomal RNA89971027199710431Rat
7555737LOC102547387uncharacterized LOC1025473878100179745100187331Rat
7595944LOC102548160uncharacterized LOC1025481608100802730100813286Rat
41334951LOC120094242uncharacterized LOC1200942428101332200101337752Rat
7621358LOC102549824uncharacterized LOC1025498248103578910103588660Rat
7532272LOC102550226uncharacterized LOC1025502268103967818103978728Rat
41040425LOC120094249uncharacterized LOC1200942498104490550104507483Rat
41393413LOC12009439740S ribosomal protein S6-like8104961099104961924Rat
11439069Trnac-gca32transfer RNA cysteine (anticodon GCA) 328105023468105023539Rat
9338792LOC103693167uncharacterized LOC1036931678106473549106501011Rat
11470505LOC108351809uncharacterized protein C7orf73-like8107741706107742538Rat
7535217LOC102551872alpha-enolase-like8108499236108500742Rat
7571509LOC102552837small nuclear ribonucleoprotein Sm D2-like8108925804108926370Rat
41400735LOC12009434940S ribosomal protein S15a-like8109019200109023267Rat
11368784LOC108351778uncharacterized LOC1083517788109563411109575077Rat
7707515LOC102553911cytochrome c oxidase subunit 6C-2-like8109784464109784977Rat
11374321LOC108351781uncharacterized LOC1083517818110593527110596275Rat
7696038LOC102552504uncharacterized LOC1025525048111077809111086644Rat
11441453LOC108351782uncharacterized LOC1083517828111461637111469093Rat
11500365Trnap-agg10transfer RNA proline (anticodon AGG) 108111820792111820872Rat
7505140LOC102553777uncharacterized LOC1025537778112736867112746739Rat
11412166LOC108351784uncharacterized LOC1083517848113254101113259069Rat
7505909LOC102554279uncharacterized LOC1025542798113279948113338417Rat
40964733LOC120094511small nucleolar RNA SNORA178113714597113714719Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
41518D8Rat13516988926519289265351Ratregion
5063360BF41073410288927245589272557Ratregion
5056883RH14463517088927620689276376Ratregion
5064690BF39957116188930809189308252Ratregion
5088024Nt512788931261089312737Ratregion
5050202RH13392021588931449989314714Ratregion
5049446RH13348621888931550689315724Ratregion
1627539D8Sunn111421188934632889346539Ratregion
5035284AA89127320088939322389393423Ratregion
5054707RH14337920888940346889403676Ratregion
5025564RH12880718988940493389405122Ratregion
5028344SGC3267012288940923089409352Ratregion
5507011fj44g04.x113588940947889409613Ratregion
5501351RH1614614988941465089415308Ratregion
5068900AU04685515288954092489541076Ratregion
5060264AW53102715388972908989729242Ratregion
5505235Mthfs6588977662889776693Ratregion
5048646RH13302318288977671589776897Ratregion
5032221AI11969511188977671789776828Ratregion
5025188RH12735319488977862389778817Ratregion
5059340BG3774269088979887789798967Ratregion
5046884RH13201020188980172689801927Ratregion
1627551D8Sunn118221188984345889843669Ratregion
44489D8Got14120288995860589958807Ratregion
44490D8Got13526388997047689970739Ratregion
44487D8Got13924788998304989983296Ratregion
44494D8Got14425689014762190147875Ratregion
5034428BE11799515689016319890163354Ratregion
40168D8Rat13313389016533390165460Ratregion
5026188RH13125418189024153390241714Ratregion
40364D8Rat13415589030842790308572Ratregion
5071386RH13505219389032370090323893Ratregion
5069378AU04653813489044476190444897Ratregion
5047212RH13219819789045192890452125Ratregion
5089267AU04905420789045622490456426Ratregion
35595D8Rat2015289050844290508589Ratregion
1634088D8Got30910389052960790529705Ratregion
44485D8Got14223589056856290568797Ratregion
5049970RH13378721289057391690574127Ratregion
5025286RH12773720789062665490627524Ratregion
5072276RH13675521089063803990638249Ratregion
5069298AU04659028289068301490683293Ratregion
5064502AA95686311089074410390744213Ratregion
5049100RH13328619189074637290746563Ratregion
5034914AI22849110789075263290752739Ratregion
5029839BF38791420889075595690756164Ratregion
5073512RH13747921289077736790777579Ratregion
5045400RH13115621289078531290785524Ratregion
40760D8Rat13120089086382490864016Ratregion
41372D8Rat13215989086385690864009Ratregion
1629163D8Got33623989134971291349951Ratregion
44498D8Got14720089135434791354562Ratregion
44498D8Got14720089135436291354562Ratregion
5503670UniSTS:46609115989190913891909993Ratregion
5034500BF40965015189192747091927621Ratregion
5060434BE11006015389193041491930567Ratregion
5026114RH13096721589193465991934874Ratregion
5055775RH14399513089193618191936311Ratregion
67241D8Arb1621289255189492552106Ratregion
5066126AA9256719089277483992774929Ratregion
5054643RH14334212589279429892794423Ratregion
5080578RH14166121089280083292801041Ratregion
5034968AI23761718989280257392802762Ratregion
5084488AA94619610789280600992806116Ratregion
5042190RH12929221789284561592845832Ratregion
5084626AI23611815089302552193025671Ratregion
5025876RH13003418089316694893167128Ratregion
34870D8Rat1814689319619093196336Ratregion
5036851AU04941219589328201093282207Ratregion
36488D8Rat1717289335132693351498Ratregion
1637908D8Got32814189350232893502464Ratregion
5089517AU04920212989350233693502465Ratregion
36904D8Rat1915389396514193965294Ratregion
5068016AU04740116189412341194123574Ratregion
35038D8Rat1615389438867194388843Ratregion
40736D8Rat12923589445721394457446Ratregion
5044638RH13071918689507100195071187Ratregion
5077782RH13995619889509182195092019Ratregion
5067462AU04772914089512897395129113Ratregion
5077050RH13953015189529919495299343Ratregion
5078478RH14036612089529920495299322Ratregion
5031151BE11644718389535009695350277Ratregion
5089465AU04917215689547111095471266Ratregion
44499D8Got1499989555329195553387Ratregion
5063352BF40414422389556827595568498Ratregion
44505D8Got15217189560663695606807Ratregion
44501D8Got15126389567126495671527Ratregion
5090191AU04960519989577336695773560Ratregion
5071804RH13529418189584271095842894Ratregion
5076668RH13930918389595187695952058Ratregion
5054383RH14319322489595196895952192Ratregion
5046802RH13196318489596222395962401Ratregion
5505379Chst236889596420695964574Ratregion
37818D8Rat6610689597299595973095Ratregion
5076156RH13901119689601927996019475Ratregion
5077674RH13989220489601974196019945Ratregion
5506280D15S98469589607530996076004Ratregion
5057778BF38619116389607608496076247Ratregion
5083025BF39068815589610240896102563Ratregion
5029353RH14447411789612089096121007Ratregion
5059216BF38768620889612214296122350Ratregion
39656D8Rat12520289615505096155254Ratregion
5086384BQ20483320889617689296177100Ratregion
5065534BE10923316389617954296179705Ratregion
5086630BQ20648015489620916396209317Ratregion
5499751UniSTS:23447116289623156896231731Ratregion
5039356RH12765918089625089896251078Ratregion
5056255RH14427318289626452796264709Ratregion
5500023UniSTS:23622021989626469596264914Ratregion
7205970Trpc111089626504396265153Ratregion
5050850RH13429419589631813296318327Ratregion
5068220AU04727719589642996396430158Ratregion
5049360RH13343619289663234896632540Ratregion
1635664D8Wox3520389674460796744810Ratregion
5049224RH13335718489675087596751059Ratregion
5081292RH14207621389689533596895770Ratregion
5502625RH12590523889691029196910529Ratregion
5042908RH12971621489691063296910846Ratregion
5065710BF40625216789692760596927772Ratregion
60599D8Got15024489701495197015195Ratregion
35715D8Rat9213689702028997020436Ratregion
5050352RH13400715089703891297039062Ratregion
5029545BF41855813689703925397039389Ratregion
5041676RH128994089704916897049378Ratregion
5049814RH13369722089706893997069159Ratregion
5047842RH13256018589707270197072886Ratregion
5047738RH13250021489711734997117563Ratregion
5076536RH13923220589711825397118566Ratregion
5052073RH9482424889712005797120305Ratregion
5054701RH14337614389712010497120247Ratregion
5504205BARC007321989718028497180503Ratregion
5061042BF40173315589724813897248293Ratregion
5061962BI29449016789725932297259489Ratregion
5059452AW53089619089728803997288229Ratregion
5054359RH14317911389730183097301943Ratregion
5026630RH13294418289730815997308341Ratregion
5063068BF41027215989732677297326931Ratregion
5061282BE11144819489732717597327369Ratregion
5067940AU04744513289737271297372841Ratregion
5061708BE10593917689739351597393691Ratregion
5073152RH13726922089741982897420048Ratregion
5071890RH13534418989745798797458180Ratregion
5035164AW53505921389759744397597656Ratregion
5031254PMC114802P147289764655297647024Ratregion
5503902BARC000943089764655997646989Ratregion
5035899PMC30226P141389764662997646985Ratregion
5027975D1791116289764695097647112Ratregion
5053379RH14261410589766231997662424Ratregion
5064620BF39945617689769117697691352Ratregion
5064562BF39936721589769128797691502Ratregion
5032763RH13520918989769167897691867Ratregion
5051477AI44897313489802049498020628Ratregion
5041616RH12895919589802051798020712Ratregion
5059676BE09760515689802457098024726Ratregion
44507D8Got15721989802990998030129Ratregion
41220D8Rat12716089827543798275613Ratregion
40032D8Rat12815889831615698316316Ratregion
5030625BI30136015389845382998453982Ratregion
5064544BF39935518889872729698727484Ratregion
1628558D8Got32219489895186198952055Ratregion
35018D8Rat1514689896861798968765Ratregion
5076566RH13925013489900356399003697Ratregion
5070147RH944998389904661599046698Ratregion
11224D8Arb1728089908329699083788Ratregion
5069975RH9439516989908359699083763Ratregion
11223D8Wox612689908361299083736Ratregion
11222D8Mgh314089910336799103503Ratregion
5089103AU04895624389916304199163284Ratregion
5043354RH12997820389918324099183443Ratregion
5082433BE11939315889918601099186168Ratregion
5030859AW52973915389919453999194692Ratregion
44504D8Got15338389951110099511480Ratregion
5503502Foxl237089951330299513672Ratregion
5051479AU04512826189951542599515686Ratregion
5038684BB5572269589951565699515751Ratregion
5028693UniSTS:46320842389951568999516112Ratregion
5055423RH14379214889951583999515987Ratregion
41212D8Rat12616689952490599525068Ratregion
5062238BE11296915089954981099550237Ratregion
5047590RH13241521089955952799559737Ratregion
5077072RH13954421689959471099594926Ratregion
5078510RH14038413589959479199594926Ratregion
44503D8Got15614189976764299767777Ratregion
44500D8Got15419389976764999767836Ratregion
5061104AW53233018189987044899870629Ratregion
5086533BM38651915589987498499875622Ratregion
44502D8Got15519189993336699933557Ratregion
5026604RH1328451988100078162100078360Ratregion
5061992BF3970951968100150660100150856Ratregion
5085551BM3832341708100178830100179000Ratregion
5077730RH1399241808100218447100218627Ratregion
5072374RH1368121638100218670100218833Ratregion
5046974RH1320621898100247732100247921Ratregion
5041018RH1286161938100248057100248250Ratregion
1632732D8Ulb22878100294966100295253Ratregion
36003D8Rat141668100382367100382532Ratregion
7193047Sox143798100422453100422832Ratregion
5088108Sox141008100423367100423467Ratregion
5502738UMNe5062298100468821100469051Ratregion
5084568AI0139282128100979177100979389Ratregion
44506D8Got1592608101175496101175756Ratregion
5065250BE1212821548101287129101287283Ratregion
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5037151WI-189221468109025491109025637Ratregion
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5502204GDB:5806836938109179290109180909Ratregion
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5500027UniSTS:2362591438110360304110360447Ratregion
5505368Ptpn232758110364962110365237Ratregion
5041526RH1289072118110400755110400966Ratregion
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5070319AJ132889828110504296110504378Ratregion
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5500029UniSTS:2362623288110553979110554307Ratregion
37892D8Rat902338110572032110572221Ratregion
5047978RH1326382068110597144110597350Ratregion
5042210RH1293032208110686144110686364Ratregion
5501099PMC135637P208110697310110697617Ratregion
5085333AW5328741758110697395110697569Ratregion
5506115UniSTS:4984003668110697607110697973Ratregion
5506153UniSTS:498482688110702709110702777Ratregion
67247D8Arb212398110738338110738575Ratregion
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5034878AI1702331478110755927110756074Ratregion
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36781D8Rat111628110921334110921472Ratregion
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5073562RH1375081388111034674111034812Ratregion
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5074118RH1378321328111453393111453525Ratregion
5035278AW5294791508111453853111454003Ratregion
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44525D8Got2091618112029138112029299Ratregion
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42874D8Rat2012418112087746112087983Ratregion
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5033195RH1379351918112185513112185704Ratregion
34180D8Mgh11138112202463112202585Ratregion
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35717D8Rat91438112783689112783834Ratregion
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36267D8Rat83298113310201113310524Ratregion
1636198D8Got3131588113329283113329441Ratregion
5039182RH1275592208113593711113593931Ratregion
5052490C763642178113593843113594060Ratregion
5034273RH1420162008113648822113649022Ratregion
40370D8Rat1221758113698073113698250Ratregion
5063350BF4041402058113767832113768037Ratregion
5082883BF3903221828113767928113768110Ratregion
5062372BF3978261958113789772113789966Ratregion
5082797BF3901261508113859026113859176Ratregion
5056489RH1444081378113859666113859803Ratregion
5044720RH1307652098113911167113911376Ratregion
5025624RH1290341508113915454113915604Ratregion
5065614BF4126112228113922884113923106Ratregion
44526D8Got1781418113974178113974319Ratregion
1630270D8Got3251258114013482114013607Ratregion
38140D8Rat722048114019644114019816Ratregion
Position Markers

Flank 1: (D8Rat135)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2889,265,192 - 89,265,351 (+)MAPPER
Rnor_6.0895,963,141 - 95,963,297NCBI
Rnor_5.0895,458,335 - 95,458,491UniSTS
RGSC_v3.4893,585,900 - 93,586,056UniSTS
RGSC_v3.4893,585,899 - 93,586,055RGD
RGSC_v3.1893,605,354 - 93,605,510RGD
Celera888,835,545 - 88,835,709UniSTS
RH 3.4 Map81011.9RGD
RH 3.4 Map81011.9UniSTS
RH 2.0 Map8794.0RGD
SHRSP x BN Map850.48RGD
Peak: (D8Rat12)
Rat AssemblyChrPosition (strand)Source
mRatBN7.28104,215,934 - 104,216,130 (+)MAPPER
Rnor_6.08112,120,077 - 112,120,272NCBI
Rnor_5.08111,508,677 - 111,508,872UniSTS
RGSC_v3.48108,654,472 - 108,654,668RGD
RGSC_v3.48108,654,473 - 108,654,668UniSTS
RGSC_v3.18108,673,928 - 108,674,123RGD
Celera8103,591,244 - 103,591,439UniSTS
RH 3.4 Map81162.9UniSTS
RH 3.4 Map81162.9RGD
RH 2.0 Map8863.6RGD
SHRSP x BN Map866.31RGD
FHH x ACI Map872.4099RGD
Flank 2: (D8Rat72)
Rat AssemblyChrPosition (strand)Source
mRatBN7.28114,019,644 - 114,019,816 (+)MAPPER
Rnor_6.08122,354,143 - 122,354,314NCBI
Rnor_5.08121,666,997 - 121,667,168UniSTS
RGSC_v3.48118,725,143 - 118,725,315RGD
RGSC_v3.48118,725,144 - 118,725,315UniSTS
RGSC_v3.18118,744,599 - 118,744,770RGD
Celera8113,266,197 - 113,266,368UniSTS
RH 3.4 Map81199.3RGD
RH 3.4 Map81199.3UniSTS
RH 2.0 Map8956.8RGD
SHRSP x BN Map875.25RGD
Cytogenetic Map8q32UniSTS


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2313400Anxrr25Anxiety related response QTL 25aggression-related behavior trait (VT:0015014)tameness/aggressiveness composite score (CMO:0002136)889265192114019816Rat
2316950Scl66Serum cholesterol level QTL 664.1blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)830848259105647037Rat
631650Stl6Serum triglyceride level QTL 640.0019blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)810378157112202585Rat
631653Bp125Blood pressure QTL 1253.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)866142385111142385Rat
631664Hcar3Hepatocarcinoma resistance QTL 32.90.0005liver integrity trait (VT:0010547)volume of individual liver tumorous lesion (CMO:0001078)85423764499103503Rat
731182Uae24Urinary albumin excretion QTL 246.4urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)81933115293965294Rat
738011Anxrr9Anxiety related response QTL 96.1exploratory behavior trait (VT:0010471)number of entries into a discrete space in an experimental apparatus (CMO:0000960)893535351123900184Rat
738014Anxrr15Anxiety related response QTL 153.60.005locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)895718998123900184Rat
8694446Bw170Body weight QTL 17012.070.001retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)871888757116888757Rat
9590292Uminl3Urine mineral level QTL 33.620.001urine mineral amount (VT:0015086)urine electrolyte level (CMO:0000593)871888757116888757Rat
8694200Abfw4Abdominal fat weight QTL 49.070.001visceral adipose mass (VT:0010063)abdominal fat pad weight to body weight ratio (CMO:0000095)871888757116888757Rat
8694392Bw161Body weight QTL 1618.060.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)871888757116888757Rat
8662823Vetf5Vascular elastic tissue fragility QTL 51.9artery integrity trait (VT:0010639)patent ductus arteriosus score (CMO:0002566)82824291299525068Rat
10402857Bp380Blood pressure QTL 3800.95arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)85396876598968765Rat
1331838Niddm61Non-insulin dependent diabetes mellitus QTL 613.530.0004blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)83646953599083736Rat
1300171Bp184Blood pressure QTL 1843.66arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)870513503118219066Rat
1300177Cm2Cardiac mass QTL 23.65heart mass (VT:0007028)heart weight (CMO:0000017)854259986100382532Rat
1549908Neudeg1Neurodegradation QTL 15.50nervous system integrity trait (VT:0010566)logarithm of the ratio of the lesioned side motor neuron count to contralateral side motor neuron count (CMO:0001986)83018886794457446Rat
1549909Stresp11Stress response QTL 116.830.0019stress-related behavior trait (VT:0010451)number of approaches toward negative stimulus before onset of defensive burying response (CMO:0001960)873473045118473045Rat
1554321Bmd3Bone mineral density QTL 37.90.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)840952565123900184Rat
1358893Bp263Blood pressure QTL 2635.01arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)893965141123900184Rat
1358896Bp262Blood pressure QTL 2622.89arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)82720571599103503Rat
1358903Bp252Blood pressure QTL 25270.0001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)893965141123900184Rat
1358906Bp253Blood pressure QTL 25340.0004arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)84071306693965294Rat
1581557Eae16Experimental allergic encephalomyelitis QTL 163.8nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)88462195110921472Rat
1578755Pur5Proteinuria QTL 53.30.0001total urine protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)830848154101699754Rat
1578765Klgr1Kidney lesion grade QTL 13.30.0001kidney morphology trait (VT:0002135)organ lesion measurement (CMO:0000677)830848154101699754Rat
1578769Uae31Urinary albumin excretion QTL 313.30.001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)830848154101699754Rat
1599689Iddm24Insulin dependent diabetes mellitus QTL 244.720.001blood glucose amount (VT:0000188)age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)8112834440118649220Rat
61437Cia6Collagen induced arthritis QTL 6joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)882460758122812818Rat
70197BpQTLcluster8Blood pressure QTL cluster 83.482arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)846531639119088624Rat
70197BpQTLcluster8Blood pressure QTL cluster 83.482arterial blood pressure trait (VT:2000000)pulse pressure (CMO:0000292)846531639119088624Rat
70197BpQTLcluster8Blood pressure QTL cluster 83.482arterial blood pressure trait (VT:2000000)absolute change in systolic blood pressure (CMO:0000607)846531639119088624Rat
70197BpQTLcluster8Blood pressure QTL cluster 83.482arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)846531639119088624Rat
631210Bw3Body weight QTL35.9mesenteric fat pad mass (VT:0010427)mesenteric fat pad weight to body weight ratio (CMO:0000654)869349194112783834Rat
631217Activ1Activity QTL 115.9voluntary movement trait (VT:0003491)number of photobeam interruptions in an experimental apparatus (CMO:0001517)8102370617108923645Rat
70161Bp62Blood pressure QTL 622.90.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)84269268490165460Rat
2303171Bp331Blood pressure QTL 3315.570.005arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)861290298119084929Rat
2303570Gluco48Glucose level QTL 482blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)84980583194805831Rat
2301402Bp316Blood pressure QTL 3160.005arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)85396876598968765Rat
12879882Am8Aortic mass QTL 80.001aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)84329616998968765Rat
2300181Bmd55Bone mineral density QTL 555.70.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)876468691121468691Rat
12879879Cm99Cardiac mass QTL 990.001heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)84329616998968765Rat
1358912Bw51Body weight QTL 512.95body mass (VT:0001259)body weight (CMO:0000012)851351728107062046Rat
12879881Cm101Cardiac mass QTL 1010.001heart right ventricle mass (VT:0007033)heart right ventricle weight to body weight ratio (CMO:0000914)84329616998968765Rat
2293697Bmd39Bone mineral density QTL 39femur strength trait (VT:0010010)femur total energy absorbed before break (CMO:0001677)85404374498968765Rat
1358907Cm40Cardiac mass QTL 401.89heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)82720571599103503Rat
12879883Kidm65Kidney mass QTL 650.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)84329616998968765Rat
1358892Kidm26Kidney mass QTL 263.69kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)82720571599103503Rat
2300182Bmd56Bone mineral density QTL 565.4femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)895718998123900184Rat
12879880Cm100Cardiac mass QTL 1000.001heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)84329616998968765Rat
12879878Bw183Body weight QTL 1830.001body mass (VT:0001259)body weight (CMO:0000012)84329616998968765Rat
1331837Bw23Body weight QTL 234.190.00007body mass (VT:0001259)body weight (CMO:0000012)84653172299083736Rat
724539Cm19Cardiac mass QTL 192.6heart mass (VT:0007028)calculated heart weight (CMO:0000073)8100149864120994388Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_cross_type intercross  
qtl_general lineage: 4 unrelated tame and 4 aggressive rats were mated to get 11 F0 rats, these were mated reciprocally to get F1 rats that were backcrossed to F0 rats to get F2 animals 2313383
qtl_general these alleles are also responsible for increased body weight and decrease in the time spent in the corners of the open field 2313383
qtl_general measurement method: animals were confronted by an approaching gloved human hand attempting to handle them; these trials were videotaped and analyzed by independent observers then principal component analysis (PCA) was done on the individual glove test measures. 2313383
qtl_general number of animals used:47 F1and 733 F2 rats (383 females) 2313383