CSPG5 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 13 | 30,387,224 - 30,411,850 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 13 | 30,387,225 - 30,404,181 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 13 | 33,636,335 - 33,642,435 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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CSPG5 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 3 | 47,562,238 - 47,580,240 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 3 | 47,562,238 - 47,580,792 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 3 | 47,603,728 - 47,621,730 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 3 | 47,578,732 - 47,595,363 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 3 | 47,578,732 - 47,595,193 | NCBI | | | | | Celera | 3 | 47,545,497 - 47,562,148 (-) | NCBI | | Celera | | | Cytogenetic Map | 3 | p21.31 | NCBI | | | | | HuRef | 3 | 47,649,609 - 47,667,613 (-) | NCBI | | HuRef | | | CHM1_1 | 3 | 47,553,635 - 47,571,723 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 3 | 47,581,316 - 47,599,318 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Cspg5 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 9 | 110,072,851 - 110,091,644 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 9 | 110,072,851 - 110,091,644 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 9 | 110,243,783 - 110,262,576 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 9 | 110,243,783 - 110,262,576 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 9 | 110,146,287 - 110,165,080 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 9 | 110,090,627 - 110,107,752 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 9 | 109,972,242 - 109,991,159 (+) | NCBI | | Celera | | | Cytogenetic Map | 9 | F2 | NCBI | | | | | cM Map | 9 | 59.89 | NCBI | | | | |
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Cspg5 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 8 | 119,098,932 - 119,113,191 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 8 | 110,220,506 - 110,234,766 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 8 | 110,220,653 - 110,234,758 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 8 | 115,836,168 - 115,850,256 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 8 | 114,035,357 - 114,049,445 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 8 | 111,878,144 - 111,892,232 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 8 | 118,333,695 - 118,348,040 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 8 | 118,333,706 - 118,347,582 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 8 | 117,686,012 - 117,699,639 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 8 | 114,621,534 - 114,635,336 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 8 | 114,640,987 - 114,654,786 (+) | NCBI | | | | | Celera | 8 | 109,507,895 - 109,521,130 (+) | NCBI | | Celera | | | Cytogenetic Map | 8 | q32 | NCBI | | | | |
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Cspg5 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955420 | 24,734,561 - 24,747,414 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955420 | 24,735,155 - 24,746,580 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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CSPG5 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 2 | 47,520,542 - 47,537,132 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 3 | 47,525,309 - 47,541,900 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 3 | 47,464,341 - 47,482,910 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 3 | 48,563,837 - 48,579,593 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 3 | 48,564,199 - 48,580,048 (-) | Ensembl | panpan1.1 | | panPan2 | |
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CSPG5 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 20 | 41,344,098 - 41,356,810 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 20 | 41,344,093 - 41,356,800 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 20 | 41,259,864 - 41,288,755 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 20 | 41,826,723 - 41,855,158 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 20 | 41,826,723 - 41,839,797 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 20 | 41,068,831 - 41,097,249 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 20 | 41,469,308 - 41,498,069 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 20 | 41,750,035 - 41,778,891 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Cspg5 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024405118 | 201,686,474 - 201,700,710 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936596 | 1,235,545 - 1,251,166 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936596 | 1,235,550 - 1,251,100 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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CSPG5 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 22 | 8,963,493 - 8,982,308 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 22 | 8,963,676 - 8,980,225 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666041 | 158,141,489 - 158,160,497 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Cspg5 (Heterocephalus glaber - naked mole-rat) |
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