Adam17 (ADAM metallopeptidase domain 17) - Rat Genome Database

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Gene: Adam17 (ADAM metallopeptidase domain 17) Rattus norvegicus
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Symbol: Adam17
Name: ADAM metallopeptidase domain 17
RGD ID: 620404
Description: Predicted to enable several functions, including PDZ domain binding activity; metallopeptidase activity; and signaling receptor binding activity. Involved in several processes, including cellular response to mechanical stimulus; positive regulation of ERK1 and ERK2 cascade; and regulation of apoptotic process. Located in apical part of cell and cell surface. Biomarker of Alzheimer's disease; congestive heart failure; and thoracic aortic aneurysm. Human ortholog(s) of this gene implicated in Alzheimer's disease; inflammatory bowel disease; and type 2 diabetes mellitus. Orthologous to human ADAM17 (ADAM metallopeptidase domain 17); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; interleukin-6 signaling pathway; Notch signaling pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,6-dinitrotoluene; 2-amino-2-deoxy-D-glucopyranose.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: a disintegrin and metallopeptidase domain 17; a disintegrin and metalloprotease domain 17; a disintegrin and metalloproteinase domain 17; a disintegrin and metalloproteinase domain 17 (tumor necrosis factor, alpha, converting enzyme); ADAM 17; disintegrin and metalloproteinase domain-containing protein 17; TACE; TNF-alpha convertase; TNF-alpha converting enzyme; TNF-alpha-converting enzyme
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8646,601,583 - 46,663,690 (-)NCBIGRCr8
mRatBN7.2640,872,936 - 40,920,700 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl640,872,856 - 40,920,639 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx641,195,035 - 41,242,751 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0641,509,725 - 41,557,442 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0640,942,985 - 40,990,706 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0643,400,525 - 43,448,280 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl643,400,528 - 43,448,280 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0660,268,228 - 60,315,989 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4641,882,432 - 41,930,755 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1641,885,557 - 41,933,881 (-)NCBI
Celera640,160,004 - 40,207,760 (-)NCBICelera
Cytogenetic Map6q16NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


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Original Reference(s)
Adam17RatAlzheimer's disease  IEP 13703037protein:decreased expression:cerebral cortex and hippocampusRGD 
Adam17RatAlzheimer's disease onsetISOADAM17 (Homo sapiens)13782143DNA:missense mutation: :p.R215I (rs142946965) (human)RGD 
Adam17RatBrain Hypoxia  IEP 13703065 RGD 
Adam17Ratcongestive heart failure treatmentIEP 13703064associated with pulmonary hypertensionRGD 
Adam17RatExperimental Arthritis  IEP 13703039 RGD 
Adam17RatExperimental Autoimmune Encephalomyelitis  IEP 1559178 RGD 
Adam17RatExperimental Colitis treatmentIEP 632022 RGD 
Adam17RatKidney Reperfusion Injury treatmentIEP 13703100 RGD 
Adam17RatLeft Ventricular Hypertrophy  IEP 13703040associated with hypertensionRGD 
Adam17RatPneumococcal Meningitis treatmentIMP 13703038 RGD 
Adam17Ratrenal fibrosis  ISOADAM17 (Homo sapiens)13703100 RGD 
Adam17Ratthoracic aortic aneurysm  IEP 5129489protein:increased expression:aortaRGD 
Adam17Rattype 2 diabetes mellitus  ISOADAM17 (Homo sapiens)2313250protein:increased activity:artery smooth muscleRGD 
Adam17Rattype 2 diabetes mellitus  ISOADAM17 (Homo sapiens)2312470protein:increased activity:skeletal muscle tissueRGD 
Adam17Ratureteral obstruction  ISOAdam17 (Mus musculus)13703030 RGD 
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Adam17Ratgenetic disease  ISOADAM17 (Homo sapiens)8554872ClinVar Annotator: match by term: Inborn genetic diseasesClinVarPMID:25741868 and PMID:28492532
Adam17RatNeonatal Inflammatory Skin and Bowel Disease 1  ISOADAM17 (Homo sapiens)8554872ClinVar Annotator: match by term: Inflammatory skin and bowel disease more ...ClinVarPMID:16199547 more ...
Adam17RatNEURODEVELOPMENTAL DISORDER WITH MICROCEPHALY, HYPOTONIA, NYSTAGMUS, AND SEIZURES  ISOADAM17 (Homo sapiens)8554872ClinVar Annotator: match by term: Neurodevelopmental disorder with microcephaly more ...ClinVar 
Adam17Ratsyndromic microphthalmia 5  ISOADAM17 (Homo sapiens)8554872ClinVar Annotator: match by term: Anophthalmia-microphthalmia syndromeClinVarPMID:26639818 and PMID:26893459
Adam17Rattuberculosis  ISOADAM17 (Homo sapiens)8554872ClinVar Annotator: match by term: Mycobacterium tuberculosis and susceptibility toClinVarPMID:25741868
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Adam17RatBlister  ISOADAM17 (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:19167455
Adam17Ratcolitis  ISOADAM17 (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:24548422
Adam17RatExperimental Liver Cirrhosis  ISOADAM17 (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:25380136
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Adam17Ratatopic dermatitis  ISSAdam17 (Mus musculus)13592920OMIM:603165MouseDO 
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Adam17RatNeonatal Inflammatory Skin and Bowel Disease 1  ISOADAM17 (Homo sapiens)7240710 OMIM 

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Adam17Rat1,2-dimethylhydrazine increases expressionISOAdam17 (Mus musculus)64804641 and 2-Dimethylhydrazine results in increased expression of ADAM17 mRNACTDPMID:22206623
Adam17Rat17alpha-ethynylestradiol affects expressionISOAdam17 (Mus musculus)6480464Ethinyl Estradiol affects the expression of ADAM17 mRNACTDPMID:17555576
Adam17Rat17alpha-ethynylestradiol multiple interactionsISOAdam17 (Mus musculus)6480464[Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of ADAM17 mRNACTDPMID:17942748
Adam17Rat17alpha-ethynylestradiol increases expressionISOAdam17 (Mus musculus)6480464Ethinyl Estradiol results in increased expression of ADAM17 mRNACTDPMID:17942748
Adam17Rat17beta-estradiol multiple interactionsISOADAM17 (Homo sapiens)6480464[Progesterone co-treated with Estradiol] results in decreased expression of ADAM17 mRNACTDPMID:18692832
Adam17Rat2,3,7,8-tetrachlorodibenzodioxine multiple interactionsISOAdam17 (Mus musculus)6480464[Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of ADAM17 mRNACTDPMID:17942748
Adam17Rat2,3,7,8-tetrachlorodibenzodioxine affects expressionEXP 6480464Tetrachlorodibenzodioxin affects the expression of ADAM17 mRNACTDPMID:34747641
Adam17Rat2,3,7,8-tetrachlorodibenzodioxine affects expressionISOAdam17 (Mus musculus)6480464Tetrachlorodibenzodioxin affects the expression of ADAM17 mRNACTDPMID:21570461
Adam17Rat2,3,7,8-tetrachlorodibenzodioxine increases expressionISOAdam17 (Mus musculus)6480464Tetrachlorodibenzodioxin results in increased expression of ADAM17 mRNACTDPMID:17942748
Adam17Rat2,6-dinitrotoluene affects expressionEXP 64804642 and 6-dinitrotoluene affects the expression of ADAM17 mRNACTDPMID:21346803
Adam17Rat2-amino-2-deoxy-D-glucopyranose multiple interactionsEXP 6480464Glucosamine inhibits the reaction [IL1B results in increased expression of ADAM17 mRNA] and IL1B affects the reaction [Glucosamine results in increased expression of ADAM17 mRNA]CTDPMID:17109745
Adam17Rat2-amino-2-deoxy-D-glucopyranose increases expressionEXP 6480464Glucosamine results in increased expression of ADAM17 mRNACTDPMID:17109745
Adam17Rat2-hydroxypropanoic acid decreases expressionISOADAM17 (Homo sapiens)6480464Lactic Acid results in decreased expression of ADAM17 mRNACTDPMID:30851411
Adam17Rat3,3',4,4',5-pentachlorobiphenyl decreases expressionEXP 64804643 more ...CTDPMID:23196670
Adam17Rat3,4-methylenedioxymethamphetamine increases expressionISOAdam17 (Mus musculus)6480464N-Methyl-3 and 4-methylenedioxyamphetamine results in increased expression of ADAM17 mRNACTDPMID:20188158
Adam17Rat3-isobutyl-1-methyl-7H-xanthine multiple interactionsISOADAM17 (Homo sapiens)6480464[INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol F] results in increased expression of ADAM17 mRNACTDPMID:28628672
Adam17Rat4,4'-diaminodiphenylmethane increases expressionISOAdam17 (Mus musculus)64804644 and 4'-diaminodiphenylmethane results in increased expression of ADAM17 mRNACTDPMID:18648102
Adam17Rat4,4'-sulfonyldiphenol affects expressionISOAdam17 (Mus musculus)6480464bisphenol S affects the expression of ADAM17 mRNACTDPMID:39298647
Adam17Rat4-nonylphenol affects response to substanceISOAdam17 (Mus musculus)6480464ADAM17 protein affects the susceptibility to 4-nonylphenolCTDPMID:28703301
Adam17Rat4-nonylphenol multiple interactionsISOAdam17 (Mus musculus)6480464[ADAM17 protein affects the susceptibility to 4-nonylphenol] which affects the secretion of BTC protein more ...CTDPMID:28703301

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Biological Process
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Adam17Ratamyloid precursor protein catabolic process involved_inIEAUniProtKB:P78536 and ensembl:ENSP000003099681600115GO_REF:0000107EnsemblGO_REF:0000107
Adam17Ratamyloid precursor protein catabolic process involved_inISOADAM17 (Homo sapiens)1624291 PMID:9774383RGDPMID:9774383
Adam17RatB cell differentiation involved_inISOAdam17 (Mus musculus)1624291 PMID:17371977RGDPMID:17371977
Adam17RatB cell differentiation involved_inIEAUniProtKB:Q9Z0F8 and ensembl:ENSMUSP000000679531600115GO_REF:0000107EnsemblGO_REF:0000107
Adam17Ratcell adhesion involved_inISOADAM17 (Homo sapiens)1624291 PMID:14970227RGDPMID:14970227
Adam17Ratcell adhesion involved_inIEAUniProtKB:P78536 and ensembl:ENSP000003099681600115GO_REF:0000107EnsemblGO_REF:0000107
Adam17Ratcell adhesion mediated by integrin involved_inIEAUniProtKB:P78536 and ensembl:ENSP000003099681600115GO_REF:0000107EnsemblGO_REF:0000107
Adam17Ratcell adhesion mediated by integrin involved_inISOADAM17 (Homo sapiens)1624291 PMID:14970227RGDPMID:14970227
Adam17Ratcell motility involved_inISOAdam17 (Mus musculus)1624291 PMID:18625725RGDPMID:18625725
Adam17Ratcell motility involved_inIEAUniProtKB:Q9Z0F8 and ensembl:ENSMUSP000000679531600115GO_REF:0000107EnsemblGO_REF:0000107
Adam17Ratcellular response to high density lipoprotein particle stimulus involved_inIEAUniProtKB:P78536 and ensembl:ENSP000003099681600115GO_REF:0000107EnsemblGO_REF:0000107
Adam17Ratcellular response to high density lipoprotein particle stimulus involved_inISOADAM17 (Homo sapiens)1624291 PMID:17786981RGDPMID:17786981
Adam17Ratcellular response to mechanical stimulus  IEP 11054152 RGD 
Adam17Ratcommissural neuron axon guidance involved_inIEAUniProtKB:P78536 and ensembl:ENSP000003099681600115GO_REF:0000107EnsemblGO_REF:0000107
Adam17Ratcommissural neuron axon guidance involved_inISOADAM17 (Homo sapiens)1624291 PMID:36476876RGDPMID:36476876
Adam17Ratcytokine precursor processing involved_inISOADAM17 (Homo sapiens)1624291 PMID:24813629RGDPMID:24813629
Adam17Ratdefense response to Gram-positive bacterium involved_inIEAUniProtKB:P78536 and ensembl:ENSP000003099681600115GO_REF:0000107EnsemblGO_REF:0000107
Adam17Ratdefense response to Gram-positive bacterium involved_inISOADAM17 (Homo sapiens)1624291 PMID:16034137RGDPMID:16034137
Adam17Ratepidermal growth factor receptor signaling pathway acts_upstream_of_or_withinISOAdam17 (Mus musculus)1624291MGI:95294 PMID:11278323 more ...RGDPMID:11278323 more ...
Adam17Ratepidermal growth factor receptor signaling pathway involved_inIEAUniProtKB:P78536 and ensembl:ENSP000003099681600115GO_REF:0000107EnsemblGO_REF:0000107
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Cellular Component
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Adam17Ratactin cytoskeleton located_inIEAUniProtKB:P78536 and ensembl:ENSP000003099681600115GO_REF:0000107EnsemblGO_REF:0000107
Adam17Ratactin cytoskeleton located_inISOADAM17 (Homo sapiens)1624291 PMID:17010968RGDPMID:17010968
Adam17Ratapical part of cell  IDA 13703036 RGD 
Adam17Ratapical plasma membrane located_inIEAUniProtKB:P78536 and ensembl:ENSP000003099681600115GO_REF:0000107EnsemblGO_REF:0000107
Adam17Ratapical plasma membrane located_inISOADAM17 (Homo sapiens)1624291 PMID:16034137RGDPMID:16034137
Adam17Ratcell surface  IDA 5686904 RGD 
Adam17Ratcell surface located_inIEAUniProtKB:P78536 and ensembl:ENSP000003099681600115GO_REF:0000107EnsemblGO_REF:0000107
Adam17Ratcell surface located_inISOADAM17 (Homo sapiens)1624291 PMID:18383040 more ...RGDPMID:18383040 more ...
Adam17Ratcell-cell junction located_inIEAUniProtKB:P78536 and ensembl:ENSP000003099681600115GO_REF:0000107EnsemblGO_REF:0000107
Adam17Ratcell-cell junction located_inISOADAM17 (Homo sapiens)1624291 PMID:14970227RGDPMID:14970227
Adam17Ratcytoplasm located_inIEAUniProtKB:Q9Z0F8 and ensembl:ENSMUSP000000679531600115GO_REF:0000107EnsemblGO_REF:0000107
Adam17Ratcytoplasm located_inIEAUniProtKB:P78536 and ensembl:ENSP000003099681600115GO_REF:0000107EnsemblGO_REF:0000107
Adam17Ratcytoplasm located_inISOAdam17 (Mus musculus)1624291 PMID:15739225RGDPMID:15739225
Adam17Ratcytoplasm located_inISOADAM17 (Homo sapiens)1624291 PMID:25468996RGDPMID:25468996
Adam17Ratcytosol located_inIEAUniProtKB:B2RNB2 and ensembl:ENSP000003099681600115GO_REF:0000107EnsemblGO_REF:0000107
Adam17Ratcytosol located_inISOADAM17 (Homo sapiens) and UniProtKB:P78536-11624291 RGDGO_REF:0000052
Adam17Ratcytosol located_inIEAUniProtKB:P78536 and ensembl:ENSP000003099681600115GO_REF:0000107EnsemblGO_REF:0000107
Adam17Ratfocal adhesion located_inIEAUniProtKB:P78536 and ensembl:ENSP000003099681600115GO_REF:0000107EnsemblGO_REF:0000107
Adam17Ratfocal adhesion located_inISOADAM17 (Homo sapiens)1624291 PMID:14970227RGDPMID:14970227
Adam17Ratmembrane located_inIEAUniProtKB-SubCell:SL-01621600115GO_REF:0000044UniProtGO_REF:0000044
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Molecular Function
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Adam17Ratcytokine binding enablesISOADAM17 (Homo sapiens)1624291UniProtKB:P01375 and PMID:12777399RGDPMID:12777399
Adam17Ratcytokine binding enablesIEAUniProtKB:P78536 and ensembl:ENSP000003099681600115GO_REF:0000107EnsemblGO_REF:0000107
Adam17Ratendopeptidase activity enablesISOAdam17 (Mus musculus)1624291 PMID:17245433RGDPMID:17245433
Adam17Ratendopeptidase activity enablesIEAUniProtKB:P78536 and ensembl:ENSP000003099681600115GO_REF:0000107EnsemblGO_REF:0000107
Adam17Ratendopeptidase activity enablesISSUniProtKB:Q9Z0F81600115GO_REF:0000024UniProtGO_REF:0000024
Adam17Ratendopeptidase activity enablesIEAUniProtKB:Q9Z0F8 and ensembl:ENSMUSP000000679531600115GO_REF:0000107EnsemblGO_REF:0000107
Adam17Ratendopeptidase activity enablesISOADAM17 (Homo sapiens)1624291 PMID:24990881 and PMID:25049354RGDPMID:24990881 and PMID:25049354
Adam17Rathydrolase activity enablesIEAUniProtKB-KW:KW-03781600115GO_REF:0000043UniProtGO_REF:0000043
Adam17Ratintegrin binding enablesIEAUniProtKB:P78536 and ensembl:ENSP000003099681600115GO_REF:0000107EnsemblGO_REF:0000107
Adam17Ratintegrin binding enablesISOADAM17 (Homo sapiens)1624291UniProtKB:P05556 more ...RGDPMID:14970227
Adam17Ratinterleukin-6 receptor binding enablesISOADAM17 (Homo sapiens)1624291UniProtKB:P08887 and PMID:16034137RGDPMID:16034137
Adam17Ratinterleukin-6 receptor binding enablesIEAUniProtKB:P78536 and ensembl:ENSP000003099681600115GO_REF:0000107EnsemblGO_REF:0000107
Adam17Ratmetal ion binding enablesIEAUniProtKB-KW:KW-04791600115GO_REF:0000043UniProtGO_REF:0000043
Adam17Ratmetallodipeptidase activity enablesISOAdam17 (Mus musculus)1624291 PMID:14993236RGDPMID:14993236
Adam17Ratmetallodipeptidase activity enablesIEAUniProtKB:Q9Z0F8 and ensembl:ENSMUSP000000679531600115GO_REF:0000107EnsemblGO_REF:0000107
Adam17Ratmetalloendopeptidase activity enablesISSUniProtKB:P785361600115GO_REF:0000024UniProtGO_REF:0000024
Adam17Ratmetalloendopeptidase activity enablesIEAUniProtKB:P78536 and ensembl:ENSP000003099681600115GO_REF:0000107EnsemblGO_REF:0000107
Adam17Ratmetalloendopeptidase activity enablesISOAdam17 (Mus musculus)1624291 PMID:14993236RGDPMID:14993236
Adam17Ratmetalloendopeptidase activity enablesIBAFB:FBgn0039688 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Adam17Ratmetalloendopeptidase activity enablesISOADAM17 (Homo sapiens)1624291 PMID:14625290 more ...RGDPMID:14625290 more ...
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RGD Manual Annotations


  

Imported Annotations - KEGG (archival)

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Adam17RatAlzheimer's disease pathway   IEA 6907045 KEGGrno:05010
Adam17RatNotch signaling pathway   IEA 6907045 KEGGrno:04330

Imported Annotations - PID (archival)

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Adam17Rattumor necrosis factor mediated signaling pathway   ISOADAM17 (Homo sapiens)6484113 PIDPID:200102

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#
Reference Title
Reference Citation
1. Integrin alpha5beta1 and ADAM-17 interact in vitro and co-localize in migrating HeLa cells. Bax DV, etal., J Biol Chem. 2004 May 21;279(21):22377-86. Epub 2004 Feb 16.
2. ADAMs: key components in EGFR signalling and development. Blobel CP Nat Rev Mol Cell Biol. 2005 Jan;6(1):32-43.
3. TIMP3 is reduced in atherosclerotic plaques from subjects with type 2 diabetes and increased by SirT1. Cardellini M, etal., Diabetes. 2009 Jul 6.
4. The soluble Interleukin 6 receptor: generation and role in inflammation and cancer. Chalaris A, etal., Eur J Cell Biol. 2011 Jun-Jul;90(6-7):484-94. Epub 2010 Dec 8.
5. Implication of TNF-alpha convertase (TACE/ADAM17) in inducible nitric oxide synthase expression and inflammation in an experimental model of colitis. Colon AL, etal., Cytokine 2001 Dec 21;16(6):220-6.
6. ADAM17 silencing by adenovirus encoding miRNA-embedded siRNA revealed essential signal transduction by angiotensin II in vascular smooth muscle cells. Elliott KJ, etal., J Mol Cell Cardiol. 2013 Sep;62:1-7. doi: 10.1016/j.yjmcc.2013.05.005. Epub 2013 May 17.
7. Exercise training and return to a well-balanced diet activate the neuregulin 1/ErbB pathway in skeletal muscle of obese rats. Ennequin G, etal., J Physiol. 2015 Jun 15;593(12):2665-77. doi: 10.1113/JP270026. Epub 2015 May 14.
8. Cell and molecular biology of Notch. Fiuza UM and Arias AM, J Endocrinol. 2007 Sep;194(3):459-74.
9. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
10. Deficiency of TNFalpha converting enzyme (TACE/ADAM17) causes a lean, hypermetabolic phenotype in mice. Gelling RW, etal., Endocrinology. 2008 Dec;149(12):6053-64. doi: 10.1210/en.2008-0775. Epub 2008 Aug 7.
11. Elevation of ADAM10, ADAM17, MMP-2 and MMP-9 expression with media degeneration features CaCl2-induced thoracic aortic aneurysm in a rat model. Geng L, etal., Exp Mol Pathol. 2010 Aug;89(1):72-81. Epub 2010 May 26.
12. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
13. A rare loss-of-function variant of ADAM17 is associated with late-onset familial Alzheimer disease. Hartl D, etal., Mol Psychiatry. 2018 Jul 9. pii: 10.1038/s41380-018-0091-8. doi: 10.1038/s41380-018-0091-8.
14. TACE/ADAM17-TNF-alpha pathway in rat cortical cultures after exposure to oxygen-glucose deprivation or glutamate. Hurtado O, etal., J Cereb Blood Flow Metab 2002 May;22(5):576-85.
15. Role of ADAM-17, p38 MAPK, cathepsins, and the proteasome pathway in the synthesis and shedding of fractalkine/CX3 CL1 in rheumatoid arthritis. Jones BA, etal., Arthritis Rheum. 2013 Nov;65(11):2814-25. doi: 10.1002/art.38095.
16. Matrix metalloproteinase inhibition lowers mortality and brain injury in experimental pneumococcal meningitis. Liechti FD, etal., Infect Immun. 2014 Apr;82(4):1710-8. doi: 10.1128/IAI.00073-14. Epub 2014 Feb 3.
17. Involvement of TACE/ADAM17 and ADAM10 in etoposide-induced apoptosis of germ cells in rat spermatogenesis. Lizama C, etal., J Cell Physiol. 2012 Feb;227(2):829-38. doi: 10.1002/jcp.22795.
18. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
19. IL-6/IL-6 receptor system and its role in physiological and pathological conditions. Mihara M, etal., Clin Sci (Lond). 2012 Feb;122(4):143-59. doi: 10.1042/CS20110340.
20. Impaired regulation of the TNF-alpha converting enzyme/tissue inhibitor of metalloproteinase 3 proteolytic system in skeletal muscle of obese type 2 diabetic patients: a new mechanism of insulin resistance in humans. Monroy A, etal., Diabetologia. 2009 Jul 25.
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PMID:9034190   PMID:9034191   PMID:9574564   PMID:9920899   PMID:12207026   PMID:12535668   PMID:12743035   PMID:12777399   PMID:12849708   PMID:14625290   PMID:14761956   PMID:14960606  
PMID:15337756   PMID:15691827   PMID:15739225   PMID:16034137   PMID:16179345   PMID:16399672   PMID:16737974   PMID:17010968   PMID:17245433   PMID:17371977   PMID:17655843   PMID:17786981  
PMID:17884817   PMID:18276953   PMID:18322947   PMID:18373975   PMID:18383040   PMID:18423996   PMID:18483258   PMID:18625725   PMID:18676862   PMID:18713734   PMID:18772236   PMID:19581512  
PMID:19717015   PMID:19796498   PMID:19946888   PMID:20087163   PMID:20359533   PMID:20501791   PMID:20610799   PMID:21170088   PMID:21357274   PMID:21411748   PMID:22413019   PMID:23389627  
PMID:23834487   PMID:24006456   PMID:24226769   PMID:24227843   PMID:24813629   PMID:24871629   PMID:24990881   PMID:25049354   PMID:25468996   PMID:26175156   PMID:26598506   PMID:26651291  
PMID:26944439   PMID:30046277   PMID:30551445   PMID:30953402   PMID:32170604   PMID:33275250   PMID:33492555   PMID:33660945   PMID:35909160   PMID:36586043  



Adam17
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8646,601,583 - 46,663,690 (-)NCBIGRCr8
mRatBN7.2640,872,936 - 40,920,700 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl640,872,856 - 40,920,639 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx641,195,035 - 41,242,751 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0641,509,725 - 41,557,442 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0640,942,985 - 40,990,706 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0643,400,525 - 43,448,280 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl643,400,528 - 43,448,280 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0660,268,228 - 60,315,989 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4641,882,432 - 41,930,755 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1641,885,557 - 41,933,881 (-)NCBI
Celera640,160,004 - 40,207,760 (-)NCBICelera
Cytogenetic Map6q16NCBI
ADAM17
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3829,488,486 - 9,555,830 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl29,488,486 - 9,556,732 (-)EnsemblGRCh38hg38GRCh38
GRCh3729,628,615 - 9,695,959 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3629,546,843 - 9,613,368 (-)NCBINCBI36Build 36hg18NCBI36
Build 3429,580,010 - 9,646,496NCBI
Celera29,541,264 - 9,607,791 (-)NCBICelera
Cytogenetic Map2p25.1NCBI
HuRef29,474,897 - 9,541,735 (-)NCBIHuRef
CHM1_129,558,781 - 9,625,197 (-)NCBICHM1_1
T2T-CHM13v2.029,513,510 - 9,580,869 (-)NCBIT2T-CHM13v2.0
Adam17
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391221,373,510 - 21,423,633 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1221,373,510 - 21,423,633 (-)EnsemblGRCm39 Ensembl
GRCm381221,323,509 - 21,373,632 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1221,323,509 - 21,373,632 (-)EnsemblGRCm38mm10GRCm38
MGSCv371221,329,370 - 21,379,452 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361221,570,005 - 21,620,083 (-)NCBIMGSCv36mm8
Celera1219,527,967 - 19,579,463 (+)NCBICelera
Cytogenetic Map12A1.3NCBI
cM Map128.3NCBI
Adam17
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554875,180,252 - 5,218,216 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554875,180,241 - 5,218,298 (-)NCBIChiLan1.0ChiLan1.0
ADAM17
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v212116,969,633 - 117,037,769 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12A116,974,220 - 117,041,742 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02A9,478,080 - 9,545,363 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12A9,641,194 - 9,708,091 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A9,641,201 - 9,708,054 (-)Ensemblpanpan1.1panPan2
ADAM17
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1176,589,874 - 6,638,788 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl176,589,878 - 6,638,731 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha176,517,667 - 6,566,403 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0176,687,702 - 6,737,271 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl176,687,697 - 6,737,197 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1176,580,977 - 6,629,669 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0176,583,178 - 6,631,850 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0176,597,002 - 6,645,753 (-)NCBIUU_Cfam_GSD_1.0
Adam17
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440629251,109,736 - 51,148,960 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365325,864,867 - 5,904,003 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365325,864,851 - 5,904,005 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ADAM17
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl3126,795,426 - 126,853,995 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.13126,795,513 - 126,853,995 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.23135,176,533 - 135,222,632 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ADAM17
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11498,092,093 - 98,157,657 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1498,092,044 - 98,157,217 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604514,163,022 - 14,230,392 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Adam17
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624969212,321 - 253,328 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624969212,089 - 254,532 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Variants in Adam17
131 total Variants

Predicted Target Of
Summary Value
Count of predictions:395
Count of miRNA genes:223
Interacting mature miRNAs:266
Transcripts:ENSRNOT00000010648
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 34 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
8552962Pigfal16Plasma insulin-like growth factor 1 level QTL 169.4blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)6141223769Rat
9590290Uminl2Urine mineral level QTL 23.960.001urine mineral amount (VT:0015086)urine electrolyte level (CMO:0000593)63878398983783989Rat
8693632Alc27Alcohol consumption QTL 272.20.791drinking behavior trait (VT:0001422)calculated ethanol drink intake rate (CMO:0001615)63432335751121479Rat
634318Bw118Body weight QTL 1183.55abdominal fat pad mass (VT:1000711)abdominal fat pad weight (CMO:0000088)63330954957730294Rat
10401812Kidm54Kidney mass QTL 54kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)61436878859368788Rat
634307Bp141Blood pressure QTL 1414arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)63523041780230417Rat
2292589Emca10Estrogen-induced mammary cancer QTL 100.048mammary gland integrity trait (VT:0010552)post-insult time to mammary tumor formation (CMO:0000345)61653614061536140Rat
10401800Kidm49Kidney mass QTL 49kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)61436878859368788Rat
1300164Rf15Renal function QTL 153.12renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)6507449754641141Rat
1331779Rf38Renal function QTL 382.876kidney blood vessel physiology trait (VT:0100012)absolute change in renal vascular resistance (CMO:0001900)63207442872227641Rat

1 to 10 of 34 rows
RH128637  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2640,872,490 - 40,872,671 (+)MAPPERmRatBN7.2
Rnor_6.0643,400,074 - 43,400,254NCBIRnor6.0
Rnor_5.0660,267,783 - 60,267,963UniSTSRnor5.0
RGSC_v3.4641,881,981 - 41,882,161UniSTSRGSC3.4
Celera640,159,553 - 40,159,733UniSTS
RH 3.4 Map6226.2UniSTS
Cytogenetic Map6q16UniSTS
RH70698  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2640,874,062 - 40,874,213 (+)MAPPERmRatBN7.2
Rnor_6.0643,401,646 - 43,401,796NCBIRnor6.0
Rnor_5.0660,269,355 - 60,269,505UniSTSRnor5.0
RGSC_v3.4641,883,553 - 41,883,703UniSTSRGSC3.4
Celera640,161,125 - 40,161,275UniSTS
Cytogenetic Map6q16UniSTS
RH141932  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2640,872,997 - 40,873,209 (+)MAPPERmRatBN7.2
Rnor_6.0643,400,581 - 43,400,792NCBIRnor6.0
Rnor_5.0660,268,290 - 60,268,501UniSTSRnor5.0
RGSC_v3.4641,882,488 - 41,882,699UniSTSRGSC3.4
Celera640,160,060 - 40,160,271UniSTS
RH 3.4 Map6227.5UniSTS
Cytogenetic Map6q16UniSTS




alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31



Ensembl Acc Id: ENSRNOT00000081110   ⟹   ENSRNOP00000073012
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl640,873,110 - 40,901,932 (-)Ensembl
Rnor_6.0 Ensembl643,400,528 - 43,448,280 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000105140   ⟹   ENSRNOP00000089788
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl640,872,856 - 40,920,639 (-)Ensembl
RefSeq Acc Id: NM_020306   ⟹   NP_064702
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8646,601,583 - 46,649,344 (-)NCBI
mRatBN7.2640,872,936 - 40,920,700 (-)NCBI
Rnor_6.0643,400,525 - 43,448,280 (-)NCBI
Rnor_5.0660,268,228 - 60,315,989 (-)NCBI
RGSC_v3.4641,882,432 - 41,930,755 (-)RGD
Celera640,160,004 - 40,207,760 (-)RGD
Sequence:
RefSeq Acc Id: XM_039112795   ⟹   XP_038968723
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8646,601,583 - 46,621,980 (-)NCBI
mRatBN7.2640,872,936 - 40,893,345 (-)NCBI
RefSeq Acc Id: XM_063262376   ⟹   XP_063118446
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8646,601,583 - 46,663,690 (-)NCBI
Protein RefSeqs NP_064702 (Get FASTA)   NCBI Sequence Viewer  
  XP_038968723 (Get FASTA)   NCBI Sequence Viewer  
  XP_063118446 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein CAA10072 (Get FASTA)   NCBI Sequence Viewer  
  EDM03171 (Get FASTA)   NCBI Sequence Viewer  
  EDM03172 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000073012
GenBank Protein Q9Z1K9 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_064702   ⟸   NM_020306
- Peptide Label: precursor
- UniProtKB: Q9Z1K9 (UniProtKB/Swiss-Prot),   A6HAW7 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000073012   ⟸   ENSRNOT00000081110
RefSeq Acc Id: XP_038968723   ⟸   XM_039112795
- Peptide Label: isoform X2
Ensembl Acc Id: ENSRNOP00000089788   ⟸   ENSRNOT00000105140
RefSeq Acc Id: XP_063118446   ⟸   XM_063262376
- Peptide Label: isoform X1
- UniProtKB: Q9Z1K9 (UniProtKB/Swiss-Prot),   A6HAW7 (UniProtKB/TrEMBL)
Disintegrin   Peptidase M12B

Name Modeler Protein Id AA Range Protein Structure
AF-Q9Z1K9-F1-model_v2 AlphaFold Q9Z1K9 1-827 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

RGD ID:13694517
Promoter ID:EPDNEW_R5040
Type:initiation region
Name:Adam17_1
Description:ADAM metallopeptidase domain 17
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0643,448,175 - 43,448,235EPDNEW


1 to 34 of 34 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-38036 BioCyc
Ensembl Genes ENSRNOG00000060694 Ensembl, ENTREZGENE
Ensembl Transcript ENSRNOT00000081110 ENTREZGENE
Gene3D-CATH 3.40.390.10 UniProtKB/Swiss-Prot
  4.10.70.10 UniProtKB/Swiss-Prot
  4.10.70.30 UniProtKB/Swiss-Prot
InterPro ADAM10_ADAM17 UniProtKB/Swiss-Prot
  ADAM17_MPD UniProtKB/Swiss-Prot
  ADAM_Metalloproteinase UniProtKB/Swiss-Prot
  Disintegrin_dom UniProtKB/Swiss-Prot
  Disintegrin_dom_sf UniProtKB/Swiss-Prot
  MetalloPept_cat_dom_sf UniProtKB/Swiss-Prot
  Peptidase_M12B UniProtKB/Swiss-Prot
KEGG Report rno:57027 UniProtKB/Swiss-Prot
NCBI Gene 57027 ENTREZGENE
PANTHER ADAM10/ADAM17 METALLOPEPTIDASE FAMILY MEMBER UniProtKB/Swiss-Prot
  DISINTEGRIN AND METALLOPROTEINASE DOMAIN-CONTAINING PROTEIN 17 UniProtKB/Swiss-Prot
Pfam ADAM17_MPD UniProtKB/Swiss-Prot
  Disintegrin UniProtKB/Swiss-Prot
  Reprolysin_5 UniProtKB/Swiss-Prot
PhenoGen Adam17 PhenoGen
PROSITE ADAM_MEPRO UniProtKB/Swiss-Prot
  DISINTEGRIN_2 UniProtKB/Swiss-Prot
  ZINC_PROTEASE UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000060694 RatGTEx
SMART DISIN UniProtKB/Swiss-Prot
Superfamily-SCOP Metalloproteases ('zincins'), catalytic domain UniProtKB/Swiss-Prot
  SSF57552 UniProtKB/Swiss-Prot
UniProt A0A8I6A811_RAT UniProtKB/TrEMBL
  A6HAW6_RAT UniProtKB/TrEMBL
  A6HAW7 ENTREZGENE, UniProtKB/TrEMBL
  ADA17_RAT UniProtKB/Swiss-Prot
  G3V711_RAT UniProtKB/TrEMBL
  Q9Z1K9 ENTREZGENE
1 to 34 of 34 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-09-18 Adam17  ADAM metallopeptidase domain 17  Adam17  a disintegrin and metallopeptidase domain 17  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-02-25 Adam17  a disintegrin and metallopeptidase domain 17  Adam17  a disintegrin and metalloproteinase domain 17 (tumor necrosis factor, alpha, converting enzyme)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2004-09-10 Adam17  a disintegrin and metalloproteinase domain 17 (tumor necrosis factor, alpha, converting enzyme)    a disintegrin and metalloproteinase domain 17  Name updated 1299863 APPROVED
2002-08-07 Adam17  a disintegrin and metalloproteinase domain 17      Symbol and Name status set to provisional 70820 PROVISIONAL

Note Type Note Reference
gene_mutations_overexpression increased expression induced by oxygen-glucose deprivation induces release of TNF-alpha, which inhibits apoptosis via activation of NFkappaB 632021
gene_process release of TNF-alpha promotes apoptosis inhibition 632021
gene_regulation upregulated in response to oxygen glucose deprivation 632021