Cm77 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL: Cm77 (Cardiac mass QTL 77) Rattus norvegicus

Symbol: Cm77
Name: Cardiac mass QTL 77
RGD ID: 6893340
Trait: heart mass   (VT:0007028)    
Measurement Type: heart weight to body weight ratio   (CMO:0000074)    
LOD Score: 0.26
P Value: 0.57
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2633,309,549 - 81,132,889RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0636,260,288 - 84,763,275RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0646,021,394 - 94,275,468RGDRnor5.0
RGSC_v3.4634,039,461 - 84,287,190RGDRGSC3.4
Cross Type: Not Available
Strains Crossed: WKY/Tkyo SHR/Tkyo 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait
heart mass  (IDA)

Rat Strain
SHR/Tkyo  (IEA)
WKY/Tkyo  (IEA)

References

References - curated
# Reference Title Reference Citation
1. Identification of quantitative trait loci for cardiac hypertrophy in two different strains of the spontaneously hypertensive rat. Inomata H, etal., Hypertens Res 2005 Mar;28(3):273-81.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
41370558LOC120103512uncharacterized LOC12010351263325562533325526Rat
41281285LOC120103513uncharacterized LOC12010351363344774633451185Rat
6494941Parl-ps7presenilin associated, rhomboid-like, pseudogene 763377856133782700Rat
621527Kcns3potassium voltage-gated channel, modifier subfamily S, member 363380831433865018Rat
1587516Msgn1mesogenin 163391278733913427Rat
1559792Gen1GEN1 Holliday junction 5' flap endonuclease63394759933978461Rat
7591084LOC102547959uncharacterized LOC10254795963395953233962509Rat
1311214Smc6structural maintenance of chromosomes 663397873034033201Rat
3966Vsnl1visinin-like 163403864134159479Rat
1583700Mrps10-ps1mitochondrial ribosomal protein S10, pseudogene 163417823034178737Rat
2322652Rad51ap2RAD51 associated protein 263418217734189129Rat
1586345Hspa8-ps25heat shock protein family A (Hsp70) member 8, pseudogene 2563462402634626138Rat
41331744LOC120093456small nucleolar RNA SNORA1763476947034769595Rat
1586329Hat1-ps1histone acetyltransferase 1, pseudogene 163484247134843593Rat
1586335Rpl27l8ribosomal protein L27 like 863486773334868179Rat
1305961CyriaCYFIP related Rac1 interactor A63504520835150669Rat
2322296Cox7cl1cytochrome c oxidase subunit 7C like 163532699535327273Rat
1565679Rpl27a-ps14ribosomal protein L27a, pseudogene 1463550127535501755Rat
11364133Trnav-uac3transfer RNA valine (anticodon UAC) 363558021135580283Rat
41335282LOC120093419small nucleolar RNA SNORA1563559727935597405Rat
1584995MycnMYCN proto-oncogene, bHLH transcription factor63571776435723590Rat
9410455Rps16-ps1ribosomal protein S16, pseudogene 163573100135731699Rat
619903Ddx1DEAD-box helicase 163599646936027340Rat
1585140NbasNBAS subunit of NRZ tethering complex63604835736353206Rat
11488723LOC108351202ferritin light chain 1 pseudogene63614641136147701Rat
41070163LOC120103514uncharacterized LOC12010351463621250936215589Rat
41388044LOC120103515uncharacterized LOC12010351563638231536391016Rat
1585125Morf4l1-ps9mortality factor 4 like 1, pseudogene 963658836636589355Rat
11498460LOC108351358uncharacterized LOC10835135863666987836810264Rat
1305779Lratd1LRAT domain containing 163691696936922143Rat
2319366Fbxw2-ps2F-box and WD repeat domain containing 2, pseudogene 263721253737214363Rat
7715436LOC102555226uncharacterized LOC10255522663741567537435927Rat
11498435LOC108351205uncharacterized LOC10835120563750642637610011Rat
41258020LOC120103517uncharacterized LOC12010351763761035837694325Rat
11377656LOC108351206uncharacterized LOC10835120663764487437720487Rat
1584006Eif3b-ps1eukaryotic translation initiation factor 3, subunit B, pseudogene 163785599437858259Rat
41075541Trnaa-ggc4transfer RNA alanine (anticodon GGC) 463795137037951450Rat
1583858Tdg-ps2thymine-DNA glycosylase, pseudogene 263805055838051737Rat
7515781LOC102556604uncharacterized LOC10255660463823057338279335Rat
7557098LOC102555705uncharacterized LOC10255570563832785338348255Rat
41343564LOC120103518uncharacterized LOC12010351863851558538519218Rat
1564451Trib2tribbles pseudokinase 263854597138570349Rat
7657676LOC102555864uncharacterized LOC10255586463872202838728847Rat
7500641LOC102555927uncharacterized LOC10255592763877891638822800Rat
2321713Rpl11-ps2ribosomal protein L11, pseudogene 263892067338921200Rat
40932412LOC120093236uncharacterized LOC12009323663918573239186930Rat
7501955LOC102550954uncharacterized LOC10255095463925363339290633Rat
1307646Lpin1lipin 163930919839417034Rat
70962Ntsr2neurotensin receptor 263942429739431015Rat
1564091Greb1growth regulating estrogen receptor binding 163944052239562364Rat
631412E2f6E2F transcription factor 663959222439608685Rat
3590Rock2Rho-associated coiled-coil containing protein kinase 263967911639774033Rat
1306818Slc66a3solute carrier family 66 member 363977480139786554Rat
1582838Cimip5ciliary microtubule inner protein 563979241639797072Rat
631414Kcnf1potassium voltage-gated channel modifier subfamily F member 163996230139964979Rat
628688Pdia6protein disulfide isomerase family A, member 664006298040080223Rat
1359430Atp6v1c2ATPase H+ transporting V1 subunit C264008054540144199Rat
1359447Nol10nucleolar protein 1064014421740225353Rat
1561890Cfdp1l1craniofacial development protein 1 like 164025471740255884Rat
1597342Psme3-ps2proteasome activator subunit 3, pseudogene 264027018740271205Rat
3227Odc1ornithine decarboxylase 164032983140336444Rat
41218949Snora80bsmall nucleolar RNA, H/ACA box 80B64033114340331276Rat
41299246Trnav-aac13transfer RNA valine (anticodon AAC) 1364041593840416018Rat
41314300Ptma-ps3prothymosin alpha, pseudogene 364042091940423313Rat
40979901LOC12009323860S ribosomal protein L35-like64042359440425165Rat
708375Hpcal1hippocalcin-like 164047820640584721Rat
1305263Asap2ArfGAP with SH3 domain, ankyrin repeat and PH domain 264065820140821017Rat
41082662LOC120093281U6 spliceosomal RNA64072761140727717Rat
1307810Itgb1bp1integrin subunit beta 1 binding protein 164082069340836074Rat
1305767Cpsf3cleavage and polyadenylation specific factor 364083612140864129Rat
41210651LOC120093425small nucleolar RNA SNORA2164083772240837850Rat
727866Iah1isoamyl acetate hydrolyzing esterase 164086553040872747Rat
620404Adam17ADAM metallopeptidase domain 1764087293640920700Rat
41040147LOC120093315U6 spliceosomal RNA64090153440901635Rat
41197514LOC1200932755S ribosomal RNA64092292240923040Rat
3979Ywhaqtyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta64093571440966240Rat
1596058Taf1bTATA-box binding protein associated factor, RNA polymerase I subunit B64111698041194593Rat
7731406Rbm34-ps1RNA binding motif protein 34, pseudogene 164115112341153682Rat
1305735Grhl1grainyhead-like transcription factor 164120732541257516Rat
1306646Klf11KLF transcription factor 1164128569941297548Rat
1596023Cys1cystin 164130083641318071Rat
1598310Rrm2ribonucleotide reductase regulatory subunit M264133985841346774Rat
41153839LOC120093240uncharacterized LOC12009324064137743241380036Rat
1305798Mboat2membrane bound O-acyltransferase domain containing 264147113541597599Rat
619949Kidins220kinase D-interacting substrate 22064161820741706990Rat
41007282LOC120093241ubiquinol-cytochrome-c reductase complex assembly factor 3-like64172531141725677Rat
2859Id2inhibitor of DNA binding 264174055641742393Rat
7526561LOC102553989uncharacterized LOC10255398964182949241855070Rat
9103871LOC103692605uncharacterized LOC10369260564190566341914487Rat
9329158Ndufa5-ps2NADH:ubiquinone oxidoreductase subunit A5, pseudogene 264193110841931448Rat
7629645LOC102554202uncharacterized LOC10255420264194571541969352Rat
7536096LOC102557053uncharacterized LOC10255705364204746342118475Rat
41346264LOC120093242uncharacterized LOC12009324264226566942283040Rat
41088761LOC120093243uncharacterized LOC12009324364240591042411124Rat
1583774Phgdh-ps6phosphoglycerate dehydrogenase, pseudogene 664273609142737499Rat
1561737Rnf144aring finger protein 144A64289976743019769Rat
620495Rsad2radical S-adenosyl methionine domain containing 264304651443059737Rat
1305881Cmpk2cytidine/uridine monophosphate kinase 264307370643085183Rat
11370295LOC108351213uncharacterized LOC10835121364322425643252067Rat
6501114Pgam1-ps2phosphoglycerate mutase 1, pseudogene 264346571843466451Rat
11384778LOC108351214uncharacterized LOC10835121464368784743709249Rat
2318102Silc1sciatic injury induced lincRNA upregulator of SOX1164380570943825284Rat
69351Sox11SRY-box transcription factor 1164400833344010354Rat
2324519Ube2e1-ps1ubiquitin-conjugating enzyme E2E 1, pseudogene 164412500944125650Rat
41387415LOC120093459small nucleolar RNA SNORA1764430255644302686Rat
9422695LOC103692606uncharacterized LOC10369260664449376444498160Rat
11407553LOC108351362uncharacterized LOC10835136264456576444570039Rat
41264357LOC120093466small nucleolar RNA SNORA1764468879444688925Rat
41262445LOC120093439small nucleolar RNA SNORA1764494854344948677Rat
41119779LOC120093290U6 spliceosomal RNA64499053644990642Rat
2322612Npm1-ps19nucleophosmin 1, pseudogene 1964507348145074670Rat
1564913Akr1b1-ps1aldo-keto reductase family 1, member B1 (aldose reductase), pseudogene 164508971745090928Rat
1559651Dcdc2cdoublecortin domain containing 2C64510383845179040Rat
621804Allcallantoicase64517918145214275Rat
41178284LOC120093293U6 spliceosomal RNA64520744745207550Rat
1309678Colec11collectin sub-family member 1164522397445256640Rat
61907Rps7ribosomal protein S764526620045271064Rat
1309012Rnaseh1ribonuclease H164528284945292258Rat
727828Adi1acireductone dioxygenase 164530688545313847Rat
1566054Trappc12trafficking protein particle complex subunit 1264532149645386967Rat
1305817Eipr1EARP complex and GARP complex interacting protein 164538845145502089Rat
7747059LOC102555103uncharacterized LOC10255510364580665345830237Rat
7502861LOC102555048uncharacterized LOC10255504864583490845923094Rat
7690279LOC102554981uncharacterized LOC10255498164609135246111068Rat
620550Myt1lmyelin transcription factor 1-like64616474246564234Rat
1560694Pxdnperoxidasin64658074946658345Rat
3900Tpothyroid peroxidase64669840246768199Rat
1311276Sntg2syntrophin, gamma 264680189347003390Rat
1596936Prdx1-ps5peroxiredoxin 1, pseudogene 564706871847072828Rat
41273085LOC120103519uncharacterized LOC12010351964718482147207414Rat
1359389Tmem18transmembrane protein 1864720684547214294Rat
1587117Alkal2ALK and LTK ligand 264749564547505235Rat
2020Acp1acid phosphatase 164750638047522021Rat
1306440Sh3yl1SH3 and SYLF domain containing 164752209847565858Rat
1585983Hirip3-ps1HIRA interacting protein 3, pseudogene 164757559047578182Rat
40977559LOC120093438small nucleolar RNA SNORA1764762512447625256Rat
1564713Fam110cfamily with sequence similarity 110, member C64763846647644723Rat
41147221Lamb2-ps1laminin subunit beta 2, pseudogene 164769733747811453Rat
9288946LOC103692609serine palmitoyltransferase small subunit A pseudogene64781087547812735Rat
1306311Lamb1laminin subunit beta 164783549247902585Rat
735073Dlddihydrolipoamide dehydrogenase64790415347924814Rat
620623Slc26a3solute carrier family 26 member 364802389248064829Rat
1310703Cbll1Cbl proto-oncogene like 164807119048086174Rat
7499548LOC102555378uncharacterized LOC10255537864808541548115642Rat
3293Slc26a4solute carrier family 26 member 464810757548153762Rat
11492151LOC108351220uncharacterized LOC10835122064816873748174227Rat
1359431Bcap29B-cell receptor-associated protein 2964818270248222698Rat
1311445Dus4ldihydrouridine synthase 4-like64822811148242553Rat
1563296Cog5component of oligomeric golgi complex 564824247048545185Rat
1310848Gpr22G protein-coupled receptor 2264830961948317864Rat
620444Hbp1HMG-box transcription factor 164852963348555775Rat
3394Prkar2bprotein kinase cAMP-dependent type II regulatory subunit beta64856365948653933Rat
41021534LOC120093368U1 spliceosomal RNA64866660248666749Rat
1306468Pik3cgphosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit gamma64876677848802098Rat
41158901LOC120103521uncharacterized LOC12010352164878218648787040Rat
2320310Calm2-ps3calmodulin 2, pseudogene 364887518648877852Rat
41344174LOC120093495U4 spliceosomal RNA64895729148957480Rat
1560812Ccdc71lcoiled-coil domain containing 71-like64896002048964112Rat
2321896Nxt2-ps1nuclear transport factor 2-like export factor 2, pseudogene 164901409149014679Rat
1598099Car13-ps2carbonic anhydrase 13, pseudogene 264939618149396963Rat
40944820LOC120093433small nucleolar RNA SNORA4864941353149413674Rat
631365Namptnicotinamide phosphoribosyltransferase64942531649462109Rat
41143542Metrnl-ps1meteorin-like, glial cell differentiation regulator, pseudogene 164954253649543619Rat
41201218Ccdc69-ps1coiled-coil domain containing 69, pseudogene 164954363749544171Rat
41060377Hexim2-ps1HEXIM P-TEFb complex subunit 2, pseudogene 164954466449545948Rat
7542438LOC102547473uncharacterized LOC10254747364955278549565067Rat
1359569Sypl1synaptophysin-like 164956511149585205Rat
41266620LOC120093480U6atac minor spliceosomal RNA64960520949605327Rat
1591286Cdhr3cadherin-related family member 364964183349702016Rat
7719070LOC102547703uncharacterized LOC10254770364972940349759830Rat
1305730Atxn7l1ataxin 7-like 164975987649982323Rat
7563724LOC102549100uncharacterized LOC10254910064990353049911102Rat
1307943Efcab10EF-hand calcium binding domain 1065000447950011398Rat
11378331LOC108351223uncharacterized LOC10835122365001440650029376Rat
1307824Polr1fRNA polymerase I subunit F65005328950070514Rat
41186807LOC120093447small nucleolar RNA SNORA1765009137850091506Rat
1595482Tomm70-ps1translocase of outer mitochondrial membrane 70, pseudogene 165012491150127154Rat
6486238Rpsa-ps12ribosomal protein SA, pseudogene 1265014805050149675Rat
41134593LOC120093452small nucleolar RNA SNORA1765017897850179105Rat
1595449Rps20-ps6ribosomal protein S20, pseudogene 665063628350636717Rat
1311812Ferd3lFer3-like bHLH transcription factor65064537950646268Rat
41169746Pin4-ps3peptidylprolyl cis/trans isomerase, NIMA-interacting 4, pseudogene 365064794850648344Rat
621455Twist1twist family bHLH transcription factor 165067491050676904Rat
41104462LOC120093244uncharacterized LOC12009324465074508650754911Rat
1594139Dppa4-ps4developmental pluripotency-associated 4, pseudogene 465074524350745986Rat
1310748Hdac9histone deacetylase 965076207451624311Rat
40966473LOC120093437small nucleolar RNA SNORA1765161246051612591Rat
1306328Prps1l1phosphoribosyl pyrophosphate synthetase 1-like 165168496051686650Rat
1309778Snx13sorting nexin 1365175825851862260Rat
1592964Hsp90b1-ps2heat shock protein 90 beta family member 1, pseudogene 265201194452016665Rat
2074Ahraryl hydrocarbon receptor65223408952271568Rat
7734313LOC102554773uncharacterized LOC10255477365227207752308265Rat
1598279Gapdh-ps5Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 565235656352357905Rat
1565406Agr3anterior gradient 3, protein disulphide isomerase family member65264339152666638Rat
1304606Agr2anterior gradient 2, protein disulphide isomerase family member65270860252729378Rat
1311788Tspan13tetraspanin 1365273874852765503Rat
621507Bzw2basic leucine zipper and W2 domains 265282806952888599Rat
1306017Ankmy2ankyrin repeat and MYND domain containing 265288895952930343Rat
7502513Nono-ps3non-POU domain containing, octamer-binding, pseudogene 365290116152904787Rat
1560395Lrrc72leucine rich repeat containing 7265293538752995552Rat
41110432Max-ps2MYC associated factor X, pseudogene 265294876252950726Rat
11382383Rps26-ps5ribosomal protein S26, pseudogene 565298065552996561Rat
628877Sostdc1sclerostin domain containing 165305133653055510Rat
41059523LOC120093435small nucleolar RNA SNORA4865307013453070273Rat
40986010LOC120093463small nucleolar RNA SNORA1765311671453116830Rat
1359368CrppaCDP-L-ribitol pyrophosphorylase A65312026453397030Rat
9299213Chchd2l2-ps4coiled-coil-helix-coiled-coil-helix domain containing protein 2-like 2, pseudogene 465330935553311115Rat
40964578Hnrnpa1-ps2heterogeneous nuclear ribonucleoprotein A1, pseudogene 265369794153700119Rat
41195695LOC120093493small nucleolar RNA U365380824353808325Rat
3079Meox2mesenchyme homeobox 265385676053917467Rat
2319740Exosc-ps1exosome component 4, pseudogene 165395086753951745Rat
1312038Agmoalkylglycerol monooxygenase65398623654317838Rat
41165480LOC120093298U6 spliceosomal RNA65422698154227085Rat
11398630LOC108351227uncharacterized LOC10835122765434308154383179Rat
11518989LOC108351363uncharacterized LOC10835136365438326654384851Rat
1563613Rps25l2ribosomal protein S25 like 265452133554521746Rat
2488Dgkbdiacylglycerol kinase, beta65464094855397210Rat
7669283Actg1-ps1actin, gamma 1, pseudogene 165472120154722310Rat
9263034LOC103692620thyroid hormone receptor-associated protein 3 pseudogene65483121154835676Rat
2323883Pebp1-ps2phosphatidylethanolamine binding protein 1, pseudogene 265554026455540821Rat
1312007Etv1ETS variant transcription factor 165559014955681784Rat
41312804Rplp0-ps9ribosomal protein lateral stalk subunit P0, pseudogene 965568605455686977Rat
41157524LOC120103524uncharacterized LOC12010352465595678756049486Rat
41034983LOC120093442small nucleolar RNA SNORA1765639963256399763Rat
2323695St13-ps2ST13, Hsp70 interacting protein, pseudogene 265643522256436810Rat
1305611Smarce1-ps10SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, pseudogene 1065650441056505749Rat
41392365LOC120093451small nucleolar RNA SNORA1765658492756585050Rat
41025079LOC120093443U2 spliceosomal RNA65660011356600288Rat
41263556LOC120093490U2 spliceosomal RNA65662950456629658Rat
1560073Rps10-ps21ribosomal protein S10, pseudogene 2165666905856669628Rat
40972876LOC12009324760S ribosomal protein L29-like65688837256888994Rat
1588211Phb2-ps3prohibitin 2, pseudogene 365698154956986759Rat
2152Arl4aARF like GTPase 4A65707949657084156Rat
735034Scinscinderin65710950057188123Rat
1587073Lsmem1leucine-rich single-pass membrane protein 165725172057261590Rat
2867Ifrd1interferon-related developmental regulator 165726939557317833Rat
1583856Zfp277zinc finger protein 27765738345457512785Rat
41008057LOC120093202uncharacterized LOC12009320265750914557509600Rat
1561724Dock4dedicator of cytokinesis 465751292957902597Rat
2323665Immp2linner mitochondrial membrane peptidase subunit 265807003558970165Rat
2323872H3f3l1H3.3 histone like 165809993058101667Rat
7500279LOC102552766uncharacterized LOC10255276665815077658186306Rat
41339141LOC120093204uncharacterized LOC12009320465819694858227730Rat
40934694LOC120093461small nucleolar RNA SNORA1765839618358396315Rat
41334056LOC120093203uncharacterized LOC12009320365841472558430740Rat
71066Lrrn3leucine rich repeat neuronal 365848906058520322Rat
41268906LOC120103525uncharacterized LOC12010352565940358259425212Rat
1589745Ndufa10l1NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 10-like 165987981959881252Rat
9072809LOC103692621oligosaccharyltransferase complex subunit OSTC pseudogene66043133660453277Rat
41279995LOC120093283U6 spliceosomal RNA66060760760607713Rat
3070Dnajb9DnaJ heat shock protein family (Hsp40) member B966127038561276795Rat
41003040LOC120103526uncharacterized LOC12010352666127517661282214Rat
1583553Dnajb6-ps4DnaJ heat shock protein family (Hsp40) member B6, pseudogene 466129754961299049Rat
1311444Pnpla8patatin-like phospholipase domain containing 866132981061391736Rat
3209Nrcamneuronal cell adhesion molecule66140281361698536Rat
41173563LOC120093276U6 spliceosomal RNA66175955261759658Rat
1598017Gpatch4-ps1G patch domain-containing protein 4, pseudogene 166180238961803939Rat
11407073LOC108351229transformer-2 protein homolog alpha pseudogene66184100361841697Rat
1598278Eno1-ps32enolase 1, pseudogene 3266184662961847912Rat
1583855Gapdh-ps92Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 9266186594961866939Rat
1306117Stxbp6syntaxin binding protein 666192075662157405Rat
41192509LOC120093462small nucleolar RNA SNORA1766219361062193737Rat
40950765LOC120093319U7 small nuclear RNA66238648762386545Rat
41372374LOC120093491U2 spliceosomal RNA66251956662519704Rat
7593102LOC102555380uncharacterized LOC10255538066252587262555470Rat
7652149LOC102555435uncharacterized LOC10255543566257374162579908Rat
9317184LOC103692627uncharacterized LOC10369262766260211862606902Rat
11450428LOC108351230uncharacterized LOC10835123066260524662616196Rat
41268372LOC120093449small nucleolar RNA SNORA1766285928762859414Rat
41195602LOC120093317small nucleolar RNA SNORA73 family66305535063055553Rat
621345Nova1NOVA alternative splicing regulator 166378010563905567Rat
41200290LOC120093485U2 spliceosomal RNA66451313164513345Rat
41328288LOC120093502U4 spliceosomal RNA66469570864695834Rat
40947446LOC120093250uncharacterized LOC12009325066474904964779502Rat
40951447LOC120103529uncharacterized LOC12010352966495868964973053Rat
7725900LOC102556158uncharacterized LOC10255615866503448965134280Rat
1598277Kpna1-ps3karyopherin subunit alpha 1, pseudogene 366542390965426151Rat
41004139LOC120093468small nucleolar RNA SNORA1766583512565835255Rat
1334065Or5ak28-ps1olfactory receptor family 5 subfamily AK member 28, pseudogene 166621392966214582Rat
2320031LOC100364934Leydig cell tumor 10 kDa protein-like66633698966337899Rat
2323500Phgdh-ps1phosphoglycerate dehydrogenase, pseudogene 166664132866642516Rat
1559629Atp5mc1l2ATP synthase membrane subunit c locus 1 like 266665418766654763Rat
2619Foxg1forkhead box G166667479766677611Rat
41172264LOC120103531uncharacterized LOC12010353166668467466685883Rat
7619249LOC102546421uncharacterized LOC10254642166668963566699336Rat
40997044LOC120093455small nucleolar RNA SNORA1766684549766845624Rat
41135267LOC120093458small nucleolar RNA SNORA1766688136966881496Rat
7627887LOC102546496uncharacterized LOC10254649666690249166930836Rat
9219694LOC103692628uncharacterized LOC10369262866696117167055411Rat
41302933Gapdh-ps90Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 9066739692267441051Rat
620964Prkd1protein kinase D166772519368039002Rat
41257709LOC120103532uncharacterized LOC12010353266779498267868731Rat
7728058LOC102557478uncharacterized LOC10255747866844343768505774Rat
41010064LOC120093251uncharacterized LOC12009325166856912168571922Rat
41350299LOC120093284U6 spliceosomal RNA66862788368627990Rat
1310263G2e3G2/M-phase specific E3 ubiquitin protein ligase66876384768795305Rat
619828Scfd1sec1 family domain containing 166879581068874076Rat
1587060Ube2i-ps3ubiquitin-conjugating enzyme E2I, pseudogene 366880406168805440Rat
2323296Snrnp48-ps2small nuclear ribonucleoprotein U11/U12 subunit 48, pseudogene 266893614068948448Rat
41281687Arl1-ps1ADP-ribosylation factor like GTPase 1, pseudogene 166895551168962169Rat
1308536Cochcochlin66903113969045124Rat
621827Strn3striatin 366904777669134102Rat
1311990Ap4s1adaptor related protein complex 4 subunit sigma 166913340369174488Rat
1561653Hectd1HECT domain E3 ubiquitin protein ligase 166918142969268045Rat
41293354LOC120103536uncharacterized LOC12010353666919891369201280Rat
1561116Heatr5aHEAT repeat containing 5A66932186969419861Rat
1309138Dtd2D-aminoacyl-tRNA deacylase 266945014669456430Rat
1306830Gpr33-ps1G protein-coupled receptor 33, pseudogene 166947443569475440Rat
1307232NubplNUBP iron-sulfur cluster assembly factor like66955927869781254Rat
11440663LOC108351235tensin-2 pseudogene66959456869601783Rat
1595110Cers5-ps1ceramide synthase 5, pseudogene 166982385169830063Rat
1308507Arhgap5Rho GTPase activating protein 566997590470039299Rat
41103385LOC120093278U6 spliceosomal RNA67006837370068479Rat
40945147LOC120093279U6 spliceosomal RNA67006906070069166Rat
69412Akap6A-kinase anchoring protein 667018410170624369Rat
1307181Npas3neuronal PAS domain protein 367070277371527928Rat
41254020LOC120093508U6 spliceosomal RNA67081389370813999Rat
7629096LOC102547735uncharacterized LOC10254773567087483070899484Rat
41384656LOC120093424small nucleolar RNA SNORA2/SNORA34 family67109002471090159Rat
71019Egln3egl-9 family hypoxia-inducible factor 367165029771675766Rat
41293789Trnaa-agc62transfer RNA alanine (anticodon AGC) 6267169429071694370Rat
41212191LOC120093497U4 spliceosomal RNA67169935171699530Rat
41343341LOC120093379U1 spliceosomal RNA67170661771706776Rat
7578757LOC102547890uncharacterized LOC10254789067182556671832386Rat
1559672Timm23btranslocase of inner mitochondrial membrane 23B67184524471846339Rat
2322683Nkapd1-ps1NKAP domain containing 1, pseudogene 167189601971898777Rat
9129693LOC103692636uncharacterized LOC10369263667190298071916408Rat
2323006Rps10l1ribosomal protein S10-like 167203087672031430Rat
1559724Rps19-ps18ribosomal protein S19, pseudogene 1867206650372072009Rat
41227971LOC120093434small nucleolar RNA SNORA4867210130272101443Rat
1565821Sptssaserine palmitoyltransferase, small subunit A67214471472156130Rat
1309624EappE2F-associated phosphoprotein67216648672194357Rat
41195836LOC120093301U6 spliceosomal RNA67217547672175575Rat
7646071Cetn4-ps1centrin 4, pseudogene 167217718272181768Rat
41029885LOC120093291U1 spliceosomal RNA67219467172194834Rat
41303109LOC120093206uncharacterized LOC12009320667220087072202818Rat
41114950LOC120093357U1 spliceosomal RNA67220306672203228Rat
41074541LOC120093346U1 spliceosomal RNA67220576072205923Rat
41245801LOC120093302U1 spliceosomal RNA67221144572211608Rat
41140941LOC120093313U1 spliceosomal RNA67221868472218847Rat
41319468LOC120093324U1 spliceosomal RNA67222436972224532Rat
41367672LOC120093335U1 spliceosomal RNA67222704472227207Rat
7561334LOC102548522uncharacterized LOC10254852267222721772231374Rat
1304647Snx6sorting nexin 667223095072274157Rat
7646365LOC102548461uncharacterized LOC10254846167227414272290681Rat
40971021LOC120093210uncharacterized LOC12009321067230649372316083Rat
9167354LOC103695296glyceraldehyde-3-phosphate dehydrogenase pseudogene67232884872329825Rat
1306982Cfl2cofilin 267235566472359709Rat
1306199Baz1abromodomain adjacent to zinc finger domain, 1A67238970172512516Rat
11491526LOC108351236uncharacterized LOC10835123667249434372522266Rat
41278108LOC120093303U6 spliceosomal RNA67249442772494534Rat
13046242700097O09RiklRIKEN cDNA 2700097009 gene like67254216672587511Rat
621390Srp54asignal recognition particle 54A67258758472626878Rat
2323636Fam177a1family with sequence similarity 177, member A167263262872647553Rat
1309207Ppp2r3cprotein phosphatase 2, regulatory subunit B'', gamma67264702572670885Rat
1305089Prorpprotein only RNase P catalytic subunit67266965972762419Rat
61849Psma6proteasome 20S subunit alpha 667276553472796554Rat
3171NfkbiaNFKB inhibitor alpha67285871372861941Rat
1359133Aldoart2aldolase 1 A retrogene 267293982172941511Rat
1306949Insm2INSM transcriptional repressor 267297386172976453Rat
620642Ralgapa1Ral GTPase activating protein catalytic subunit alpha 167297743273252378Rat
2325062Ftl1l2ferritin light chain 1 like 267324261273243527Rat
4888535Mir3593microRNA 359367325264773252737Rat
7744426LOC102546497uncharacterized LOC10254649767326553073266513Rat
1306006Brms1lBRMS1 like transcriptional repressor67326667373300630Rat
40967547LOC120093292U6 spliceosomal RNA67335971173359813Rat
1598274Gapdh-ps103Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 10367348811273489095Rat
1598273Ldha-ps5lactate dehydrogenase A, pseudogene 567351843473519312Rat
41331265Ldha-ps26lactate dehydrogenase A, pseudogene 2667352805573528933Rat
41086662Ldha-ps27lactate dehydrogenase A, pseudogene 2767353767673538554Rat
11370304LOC108351238uncharacterized LOC10835123867371889173725872Rat
41335350LOC120093450small nucleolar RNA SNORA1767371998573720115Rat
41075203LOC120103538uncharacterized LOC12010353867376066973766166Rat
1306310MbipMAP3K12 binding inhibitory protein 167380813373825394Rat
7751922LOC102551688uncharacterized LOC10255168867388432173909296Rat
6489654LOC100911923uncharacterized LOC10091192367395425873994337Rat
3866Nkx2-1NK2 homeobox 167399660174001483Rat
7748644LOC102552092uncharacterized LOC10255209267399997874011751Rat
41393512LOC120093467small nucleolar RNA SNORA1767401621574016333Rat
1598272Pmpcb-ps2peptidase, mitochondrial processing subunit beta, pseudogene 267402462074043020Rat
1310629Nkx2-8NK2 homeobox 867408627474087977Rat
2321461Rpl15-ps2ribosomal protein L15, pseudogene 267411817574118794Rat
1560838Pax9paired box 967418674974203508Rat
621444Slc25a21solute carrier family 25 member 2167420343974702902Rat
7624969Alg11-ps2ALG11, alpha-1,2-mannosyltransferase, pseudogene 267425915874260776Rat
11452082LOC108351240uncharacterized LOC10835124067432347874333662Rat
41044899LOC120103539uncharacterized LOC12010353967465429674666802Rat
41305281Trnav-aac44transfer RNA valine (anticodon AAC) 4467469405574694135Rat
6504372Mipol1mirror-image polydactyly 167475529375090403Rat
1359636Prps1l3phosphoribosyl pyrophosphate synthetase 1-like 367475533174763493Rat
40963012LOC120093310U6 spliceosomal RNA67480579574805882Rat
2807Foxa1forkhead box A167509990775136534Rat
1560556Ttc6tetratricopeptide repeat domain 667513682775368176Rat
41155391LOC120093489U2 spliceosomal RNA67521655975216724Rat
1598271Rps6-ps8ribosomal protein S6, pseudogene 867529572875296526Rat
41033385LOC120093510U6 spliceosomal RNA67563707175637177Rat
1587663Ldha-ps17lactate dehydrogenase A, pseudogene 1767572705975728506Rat
3762Sstr1somatostatin receptor 167583229275836806Rat
1306232Clec14aC-type lectin domain containing 14A67588147075884612Rat
1586499G3bp1-ps7G3BP stress granule assembly factor 1, pseudogene 767629770776301640Rat
1586488Ddx21-ps10DExD-box helicase 21, pseudogene 1067639943576400992Rat
41050981LOC120093454U2 spliceosomal RNA67649533176495501Rat
1586460Mrto4-ps8mRNA turnover 4, ribosome maturation factor, pseudogene 867660827276609088Rat
41067375Prelid1-ps3PRELI domain containing 1, pseudogene 367661641576617250Rat
1586428Eif4a1-ps8eukaryotic translation initiation factor 4A1, pseudogene 867662386676625179Rat
1309103Sec23aSec23 homolog A, COPII coat complex component67665879376706125Rat
620842Gemin2gem (nuclear organelle) associated protein 267670642476721154Rat
1588546Cyp51a1-ps1cytochrome P450, family 51, subfamily a, polypeptide 1, pseudogene 167672542176727572Rat
41148093U2l3U2 spliceosomal RNA like 367673093876731128Rat
1309325Trappc6btrafficking protein particle complex subunit 6B67674089876752035Rat
1597086Pnnpinin, desmosome associated protein67675813876766451Rat
6488546Mia2MIA SH3 domain ER export factor 267678750876885246Rat
41035462Snora26l1small nucleolar RNA, H/ACA box 26 like 167682355176823672Rat
1307543Fbxo33F-box protein 3367690061976934232Rat
9159722LOC103695309glyceraldehyde-3-phosphate dehydrogenase pseudogene67706861277069628Rat
41087372LOC120093280U6 spliceosomal RNA67723686577236971Rat
41111149LOC120093440small nucleolar RNA SNORA1767746342877463557Rat
41209044Hsp90ab1-ps16heat shock protein 90 alpha family class B member 1, pseudogene 1667750202177511120Rat
1563850Akr1b8-ps2aldo-keto reductase family 1, member B8, pseudogene 267756972077571967Rat
41271388LOC120093314U6 spliceosomal RNA67757123077571335Rat
1598269Paics-ps4phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase, pseudogene 467768566177687084Rat
40978870LOC120093300U6 spliceosomal RNA67775521977755326Rat
1598344Pcna-ps1proliferating cell nuclear antigen, pseudogene 167779210877793917Rat
1598268Nt5c2-ps45'-nucleotidase, cytosolic II, pseudogene 467787813777879911Rat
11455066LOC108351364uncharacterized LOC10835136467812468678134031Rat
1582962Apoo-ps1apolipoprotein O, pseudogene 167885871878859404Rat
1582948Sec13-ps3SEC13 homolog, nuclear pore and COPII coat complex component, pseudogene 367890155878903012Rat
1582931Pcbp2-ps9poly(rC) binding protein 2, pseudogene 967916269279163639Rat
2322884Entr1l1endosome associated trafficking regulator 1 like 167933121079332658Rat
1309357Lrfn5leucine rich repeat and fibronectin type III domain containing 567946640379822821Rat
1560665Timm17al1translocase of inner mitochondrial membrane 17a-like 167963705479637877Rat
41016925U3l1small nucleolar RNA U3 like 167965620179656389Rat
41370298Ppa2-ps1inorganic pyrophosphatase 2, pseudogene67985657179860348Rat
40998590LOC120093311U6 spliceosomal RNA67990149179901594Rat
40957535LOC120093486U2 spliceosomal RNA68021546380215666Rat
1597397Cct6a-ps11chaperonin containing Tcp1, subunit 6A (zeta 1), pseudogene 1168044267280487379Rat
2319091Gemin8-ps1gem (nuclear organelle) associated protein 8, pseudogene 168056394380564624Rat
2322517Fam167b-ps1family with sequence similarity 167, member B, pseudogene 168062965380630098Rat
2322466Trim13-ps1tripartite motif-containing 13, pseudogene 168069387880695270Rat
41194368LOC120093500U4 spliceosomal RNA68086314280863276Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
11141D6Arb1230364865776548658068Ratregion
11241D6Mit311767220263272202749Ratregion
11241D6Mit311767222752472227641Ratregion
11242D6Arb1738967220263372203021Ratregion
11242D6Arb1738967222725172227640Ratregion
33828D6Mit918663330939133309549Ratregion
33977D6Mit424065773029457730540Ratregion
33993D6Mit215768113288981133036Ratregion
34072D6Mgh717764579008845790265Ratregion
34306D6Mgh510467346336373463459Ratregion
11347D6Wox1824267583645575836697Ratregion
11488D6Arb721763403955034039769Ratregion
37222D6Rat8221964298481642985033Ratregion
37392D6Rat9323064343264943432879Ratregion
35235D6Rat2913063813689338137023Ratregion
35338D6Rat3116264234207842342232Ratregion
35390D6Rat3614063509870935098849Ratregion
35396D6Rat3517063443413734434305Ratregion
35531D6Rat3814963403951834039669Ratregion
36813D6Rat2017667877764178777799Ratregion
36856D6Rat4914067450824774508389Ratregion
37046D6Rat5212163541471835414835Ratregion
37662D6Rat9224563967147639671747Ratregion
37704D6Rat5817865778652357786723Ratregion
37704D6Rat5817865778652357786753Ratregion
37746D6Rat9619963855205338552278Ratregion
36534D6Rat3217264164972641649891Ratregion
36560D6Rat3415063971455039714722Ratregion
36586D6Rat2614065464100154641141Ratregion
36648D7Rat3817465907619559076366Ratregion
36729D6Rat2313967163626671636405Ratregion
36787D6Rat3716763569161835691785Ratregion
35036D6Rat2412566148089561481017Ratregion
35140D6Rat2210867259359672593685Ratregion
35583D6Rat5015066128390461284075Ratregion
35603D6Rat2117567462775574627930Ratregion
35727D6Rat1916067862976478629902Ratregion
35943D6Rat3013264737056447370696Ratregion
39848D6Rat14315863686871236868865Ratregion
39924D6Rat14120163875148238751689Ratregion
39972D6Rat13222165081844550818672Ratregion
38080D6Rat9513165289524052895390Ratregion
38220D6Rat6721364255907842559313Ratregion
38392D6Rat8524567519593275196177Ratregion
38608D6Rat10614266553155565531697Ratregion
38758D6Rat8313664025737440257518Ratregion
40044D6Rat15414866261353562613667Ratregion
40240D6Rat13313764887386348873992Ratregion
38930D6Rat6124564257507842575327Ratregion
38978D6Rat9820167692266376922872Ratregion
39022D6Rat6022565197672351976936Ratregion
39132D6Rat7023967911773079117991Ratregion
39232D6Rat9914065652904456529174Ratregion
39340D6Rat7320066944906769449277Ratregion
39450D6Rat13824964054393340544194Ratregion
42202D6Arb516063411286734113027Ratregion
42779D6Rat22824563512897435129218Ratregion
42781D6Rat20720964156247541562698Ratregion
42782D6Rat20620564747401347474227Ratregion
42783D6Rat20514965391391853914055Ratregion
42784D6Rat20124366435743064357671Ratregion
42785D6Rat16816965617434056174415Ratregion
42786D6Rat16920266304036063040562Ratregion
42787D6Rat20211765901136759011478Ratregion
42788D6Rat20423866136247361362692Ratregion
42791D6Rat19810366725990067259987Ratregion
42792D6Rat19922366977486069775071Ratregion
42793D6Rat16724967877760178777825Ratregion
41244D6Rat13515164780750247807653Ratregion
41416D6Rat12615767710214877102317Ratregion
42325D6Rat22123266522321465223444Ratregion
42326D6Rat22024767253822172538452Ratregion
40770D6Rat13923163963395539634300Ratregion
40770D6Rat13923163963405339634300Ratregion
40872D6Rat12820567369199973692206Ratregion
41052D6Rat12920067346328573463477Ratregion
41064D6Rat13419964770999047710185Ratregion
41068D6Rat12724667435695874357208Ratregion
41548D6Rat13016066911642069116571Ratregion
41606D6Rat14416763521491435215081Ratregion
41606D6Rat14416763521491435215248Ratregion
41608D6Rat14227364191223241912500Ratregion
41668D6Rat17022864554687545547114Ratregion
44074D6Got5413764236768142367818Ratregion
44075D6Got5822064343660243436822Ratregion
44076D6Got5517364513215845132331Ratregion
44077D6Got6029664905541549055711Ratregion
44078D6Got6619664982631849826514Ratregion
44079D6Got6423765019586850196103Ratregion
44080D6Got618664931999349320076Ratregion
44081D6Got6318165065626050656438Ratregion
44082D6Got6513565081852050818655Ratregion
44083D6Got6825965133459251334851Ratregion
44084D6Got6217565271828052718455Ratregion
44086D6Got6917665209418652094362Ratregion
44087D6Got6713365212784352127976Ratregion
44089D6Got7011665522499255225108Ratregion
44090D6Got7212665681194256812068Ratregion
44091D6Got7412165813703458137155Ratregion
44092D6Got7324165775583657756077Ratregion
44094D6Got7627166370286263703133Ratregion
44095D6Got7718266226831862268500Ratregion
44096D6Got8019666618874866188944Ratregion
44097D6Got7926866803086568031133Ratregion
44097D6Got7926866803086568031246Ratregion
44098D6Got8212466838305268383176Ratregion
44099D6Got8116266856820268568366Ratregion
44100D6Got9022767027725770277484Ratregion
44102D6Got8620667228099372281199Ratregion
44103D6Got9122267033069070330909Ratregion
44105D6Got8810767068487670684985Ratregion
44106D6Got8715467156001271560166Ratregion
44108D6Got8515167275125872751411Ratregion
44109D6Wox319767332477173324942Ratregion
44110D6Got9620067489842074898620Ratregion
44111D6Got9724867452093474521182Ratregion
44113D6Got9317067564335975643529Ratregion
44116D6Got9215767564336975643524Ratregion
44054D6Got3113763358620133586338Ratregion
44059D6Got3825763562070035620954Ratregion
44061D6Got3924763747429237474539Ratregion
44063D6Got3421863537535635375576Ratregion
44064D6Got3313863562072635620864Ratregion
44065D6Got4215063869622538696375Ratregion
44066D6Got4822663999081339991039Ratregion
44067D6Got4911864058269140582809Ratregion
44068D6Got5016164083215440832315Ratregion
44069D6Got5220864098285640983064Ratregion
44070D6Got19923264107509741075329Ratregion
44073D6Got5729464413207044132364Ratregion
60535D6Got3513263407368034073812Ratregion
60536D6Got3712963688572536885854Ratregion
60539D6Got4320163850625738506458Ratregion
60540D6Got4423763952980639530031Ratregion
60542D6Got4620463957175439571957Ratregion
60544D6Got5124264174835841748602Ratregion
60545D6Got5624064229693942297179Ratregion
60546D6Got5919964234734642347545Ratregion
60552D6Got9416467540545775405621Ratregion
60429D4Got14714664995905149959119Ratregion
69535D6Uwm314565669615656696289Ratregion
625778D6Got8918666994475369944939Ratregion
62501D6Uia335064485714644857495Ratregion
67223D6Arb1111265485613254856244Ratregion
67226D6Arb1667399734773997655Ratregion
67229D6Arb2124263594302235943264Ratregion
67277D6Arb836064033503740335394Ratregion
1631403D6Got31618364456250144562684Ratregion
1627862D6Got31212067188538371885503Ratregion
1628178D6Got31811865371753653717654Ratregion
1628556D6Got31018067951600179516176Ratregion
1629633D6Got30911064236533342365443Ratregion
1639193D6Wox247564033516540335238Ratregion
1639610D6Got30325764337873943378996Ratregion
1633389D6Got31122867260463272604860Ratregion
1639852D6Wox3121567400004474000263Ratregion
1635082D6Wox2667399740873997656Ratregion
1635844D6Wox198967583695975837048Ratregion
1637121D6Wox2815967400010074000263Ratregion
1638211D6Wox3618767061943170619618Ratregion
7205820fc03d10.x1067877241378773424Ratregion
7205820fc03d10.x1067877245378773424Ratregion
7193004Etv149165559124855591739Ratregion
7193005Foxg139666667626366676659Ratregion
8693214rs10751130064207823442078234Ratregion
7206372Nkx2-1101667399847973999495Ratregion
7206482Nkx2-143467399778573998219Ratregion
5036137D10Bir5067418796774188043Ratregion
5036187RH12584224565012497850125223Ratregion
5038836RH12736018664008066640081020Ratregion
7206578UniSTS:5471496064400887344008933Ratregion
5039158RH12754520665539685255397058Ratregion
5036454Prkcm20666772579967726005Ratregion
5036498Smstr113667583418975834325Ratregion
5036504Sox1173464400754844008282Ratregion
5037143RH7069815164087406240874213Ratregion
5035522NFKBIA17267285973472859906Ratregion
5035552MYCN72463571780735718531Ratregion
5035677HSCZSD08220864656401446564222Ratregion
5033937RH14068019565223574352235938Ratregion
7206238Mbip7467381683873816912Ratregion
7206240Nkx2-1132467399976074001088Ratregion
5031372PMC152658P184867285974472860592Ratregion
5034043RH141145064289992542900140Ratregion
5034067RH14123518167399594273996123Ratregion
5034161RH14160018466938647869386662Ratregion
5028883RH14268818866668877666688964Ratregion
5026278RH13159921567141037671410591Ratregion
5028937RH14289010063691697036917070Ratregion
5028985RH14307530064082545940825759Ratregion
5029041RH14329010167263265572632756Ratregion
5031698AU04744818367030784470308027Ratregion
5031748AU04728215767308387773084032Ratregion
5034379STS-N3438912164807132948071450Ratregion
5029079RH14343720567475416874754373Ratregion
5029197RH14388517864129711441297292Ratregion
5026690RH13316321864039080040391018Ratregion
5026716RH13326021667674114376741359Ratregion
5029341RH14442715766885837068858527Ratregion
5029395RH14462817164532284645323017Ratregion
5032054AU04682410163910106339101164Ratregion
5026882RH13389018967672095976721149Ratregion
5029427Twist34065067541550675755Ratregion
5032229Y1257712465708225357082377Ratregion
5032327Etv178765567654255677329Ratregion
5029581BE10124617264308375943083931Ratregion
5029649BI27753818365294773952948041Ratregion
5029669BF38684316465095367250953836Ratregion
5032463D12Ertd137e20363380861633808819Ratregion
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5085050UniSTS:25660864867672627876726909Ratregion
5081547AW43383311063560949135609601Ratregion
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5503595UniSTS:46469211665305446053054576Ratregion
5503607Titf1105767399843573999492Ratregion
5502943Tomm70a90765012542850126335Ratregion
5503500Cyp5131767672702176727338Ratregion
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5504965Tpo148464673948946740973Ratregion
5505169Trib228163854610638546387Ratregion
5505412Ndufa1090065988017459881074Ratregion
5505674UniSTS:488924163465168497151686605Ratregion
5505885UniSTS:4959999167583418075834271Ratregion
5506086Myt1l064656094346561525Ratregion
5506409Nova154066378595563786495Ratregion
5507307fc03e11.x191767142896371429882Ratregion
5507199UniSTS:22524316966667682966676998Ratregion
5507201UniSTS:22521814967400063674000785Ratregion
5506925G5409314367676591676766059Ratregion
5507095UniSTS:22454415667372162573721781Ratregion
5500105UniSTS:23680523863380986533810103Ratregion
5499627MARC_4117-4118:991938388:111164854418148544292Ratregion
5499671MARC_7327-7328:992008337:162265559120955591831Ratregion
5500113UniSTS:23682813764789941447899551Ratregion
5500196SHGC-15229793767832263278323569Ratregion
5502186MARC_7649-7650:996688053:1066960056669600797Ratregion
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5500442fc63b12.x1064067797040678279Ratregion
5500689RH8004618863403893334039121Ratregion
5503380S0226065534932255349902Ratregion
5503538NOVA1__606561366378348363784096Ratregion
5503778UniSTS:47067645764707231447072784Ratregion
5501191PMC152810P120967399833673998545Ratregion
5501295D11S260514566684375066843900Ratregion
5501608RH44636066184121561841338Ratregion
5501580RH6999213164854419848544329Ratregion
5501786MARC_12189-12190:1004712897:113263484325334843385Ratregion
5505540D2S171152764769210747693634Ratregion
5501820MARC_13945-13946:1007583817:174764975993649760683Ratregion
5502909Nkx2-143267399778773998219Ratregion
5507147UniSTS:22484115466772574767725901Ratregion
5502871Foxa192267513108875132010Ratregion
Position Markers

Flank 1: (D6Mit2)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2681,132,889 - 81,133,036 (+)MAPPER
Rnor_6.0684,763,275 - 84,763,421NCBI
Rnor_5.0694,275,468 - 94,275,614UniSTS
RGSC_v3.4684,287,190 - 84,287,337RGD
RGSC_v3.4684,287,191 - 84,287,337UniSTS
RGSC_v3.1684,290,646 - 84,290,793RGD
Celera679,755,506 - 79,755,652UniSTS
RH 3.4 Map6554.0UniSTS
RH 3.4 Map6554.0RGD
RH 2.0 Map6798.9RGD
SHRSP x BN Map652.2299RGD
Cytogenetic Map6 RGD
Peak: (D6Mit4)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2657,730,294 - 57,730,540 (+)MAPPER
Rnor_6.0660,606,186 - 60,606,431NCBI
Rnor_5.0670,193,933 - 70,194,178UniSTS
RGSC_v3.4659,946,628 - 59,946,874RGD
RGSC_v3.4659,946,629 - 59,946,874UniSTS
RGSC_v3.1659,949,755 - 59,950,000RGD
RH 3.4 Map6406.6UniSTS
RH 3.4 Map6406.6RGD
RH 2.0 Map6589.2RGD
Cytogenetic Map6q21UniSTS
Flank 2: (D6Mit9)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2633,309,391 - 33,309,549 (+)MAPPER
Rnor_6.0636,260,131 - 36,260,288NCBI
Rnor_5.0646,021,237 - 46,021,394UniSTS
RGSC_v3.4634,039,303 - 34,039,461RGD
RGSC_v3.4634,039,304 - 34,039,461UniSTS
RGSC_v3.1634,042,257 - 34,042,414RGD
Celera632,744,086 - 32,744,243UniSTS
RH 3.4 Map6123.2UniSTS
RH 3.4 Map6123.2RGD
RH 2.0 Map6277.3RGD
SHRSP x BN Map628.5599RGD
Cytogenetic Map6 RGD


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
9590290Uminl2Urine mineral level QTL 23.960.001urine mineral amount (VT:0015086)urine electrolyte level (CMO:0000593)63878398983783989Rat
8552962Pigfal16Plasma insulin-like growth factor 1 level QTL 169.4blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)6141223769Rat
8693632Alc27Alcohol consumption QTL 272.20.791drinking behavior trait (VT:0001422)calculated ethanol drink intake rate (CMO:0001615)63432335751121479Rat
10401812Kidm54Kidney mass QTL 54kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)61436878859368788Rat
1331743Uae28Urinary albumin excretion QTL 284.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)6134235784Rat
10401800Kidm49Kidney mass QTL 49kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)61436878859368788Rat
9589129Insul24Insulin level QTL 2419.060.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)6141223769Rat
1354632Scl29Serum cholesterol level QTL 293.74blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)63509870971636405Rat
1578758Tcas9Tongue tumor susceptibility QTL 93.29tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)6137618905Rat
70176Mcsm1Mammary carcinoma susceptibility modifier QTL 1mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)658632962103632962Rat
724524Uae2Urinary albumin excretion QTL 22.70.0005urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)673463459109394713Rat
7411542Bw127Body weight QTL 1275.50.001body mass (VT:0001259)body weight gain (CMO:0000420)6141223769Rat
1641904Alcrsp4Alcohol response QTL 4response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)667262953112262953Rat
9589048Scfw3Subcutaneous fat weight QTL 34.570.001subcutaneous adipose mass (VT:1000472)abdominal subcutaneous fat pad weight (CMO:0002069)6141223769Rat
731173Uae22Urinary albumin excretion QTL 2210.1urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)665531555140994061Rat
2301964Bp323Blood pressure QTL 3234.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)67222764181132889Rat
2293650Bss31Bone structure and strength QTL 315.050.0001femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)6142487980Rat
9590306Scort18Serum corticosterone level QTL 182.880.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)63878398983783989Rat
1578665Bss16Bone structure and strength QTL 164.4femur morphology trait (VT:0000559)bone trabecular cross-sectional area (CMO:0002311)61173566972593685Rat
4889848Pur25Proteinuria QTL 25140.003urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)65672856290198260Rat
724536Uae7Urinary albumin excretion QTL 73.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)672202632130729475Rat
1641898Colcr4Colorectal carcinoma resistance QTL43.710.0007intestine integrity trait (VT:0010554)well differentiated malignant colorectal tumor surface area measurement (CMO:0002077)62033877762613667Rat
1300128Rf16Renal function QTL 163.89renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)6507449734434305Rat
1578668Bmd14Bone mineral density QTL 143.8femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)61173566972593685Rat
70196BpQTLcluster7Blood pressure QTL cluster 76.82arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)672202632117202632Rat
70199Coreg1Compensatory renal growth QTL 111.8kidney mass (VT:0002707)compensatory renal growth score (CMO:0001894)63569161857730540Rat
2301972Bp325Blood pressure QTL 3254.8arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)6172227641Rat
2293656Bss28Bone structure and strength QTL 286.790.0001femur morphology trait (VT:0000559)femur midshaft cortical cross-sectional area (CMO:0001663)6142487980Rat
1300143Rf14Renal function QTL 142.92renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)63443413777102317Rat
1354664Slep2Serum leptin concentration QTL 24.49blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)61653614071636405Rat
2293088Iddm28Insulin dependent diabetes mellitus QTL 285.21blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)66304056271636266Rat
1331799Bp211Blood pressure QTL 2113.66407arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)672202632130919985Rat
634318Bw118Body weight QTL 1183.55abdominal fat pad mass (VT:1000711)abdominal fat pad weight (CMO:0000088)63330954957730294Rat
634307Bp141Blood pressure QTL 1414arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)63523041780230417Rat
2292589Emca10Estrogen-induced mammary cancer QTL 100.048mammary gland integrity trait (VT:0010552)post-insult time to mammary tumor formation (CMO:0000345)61653614061536140Rat
634330Pia16Pristane induced arthritis QTL 163.9joint integrity trait (VT:0010548)arthritic paw count (CMO:0001460)645790088104200226Rat
1331779Rf38Renal function QTL 382.876kidney blood vessel physiology trait (VT:0100012)absolute change in renal vascular resistance (CMO:0001900)63207442872227641Rat
1300164Rf15Renal function QTL 153.12renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)6507449754641141Rat
1331789Rf37Renal function QTL 373.224kidney blood vessel physiology trait (VT:0100012)absolute change in renal vascular resistance (CMO:0001900)672202632115200186Rat
4145119Mcs25Mammary carcinoma susceptibility QTL 250.0001mammary gland integrity trait (VT:0010552)ratio of deaths to total study population during a period of time (CMO:0001023)610894415110548006Rat
7411603Foco13Food consumption QTL 135.50.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)6141223769Rat
738024Sach5Saccharine consumption QTL 53.90.00039consumption behavior trait (VT:0002069)saccharin intake volume to total fluid intake volume ratio (CMO:0001601)6143394190Rat
1581563Uae33Urinary albumin excretion QTL 33urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)672227641130729205Rat
1598843Cm63Cardiac mass QTL 632.6heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)6139036266Rat
1558641Cm47Cardiac mass QTL 472.90.001heart mass (VT:0007028)heart wet weight (CMO:0000069)657730540104085867Rat
2293839Kiddil2Kidney dilation QTL 24.8kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)62086642281133036Rat
1576309Emca7Estrogen-induced mammary cancer QTL 74mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)615107216107351382Rat
2293837Kiddil1Kidney dilation QTL 13.7kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)681132889104393926Rat
9590140Scort4Serum corticosterone level QTL 414.490.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)63878398983783989Rat
2293709Bss23Bone structure and strength QTL 235.180.0001femur morphology trait (VT:0000559)femur cross-sectional area (CMO:0001661)6142487980Rat
2293842Kiddil3Kidney dilation QTL 34.3kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)681132889104393926Rat
7411584Foco4Food consumption QTL 44.30.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)6142838846Rat
2293841Kiddil4Kidney dilation QTL 44.4kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)62086642281133036Rat
6893340Cm77Cardiac mass QTL 770.260.57heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)63330954981132889Rat
1581550Pur8Proteinuria QTL 8urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)672227641130729205Rat
1300075Glom7Glomerulus QTL 75.60.0000002kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)671201409116201409Rat
2290393Uae37Urinary albumin excretion QTL 370.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)665531555140994061Rat
12801471Schws9Schwannoma susceptibility QTL 9nervous system integrity trait (VT:0010566)percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)661747639106747639Rat
6893332Cm74Cardiac mass QTL 740.40.64heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)657730540104085867Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_general software used: MAPMAKER/QTL 1.1 1554311
qtl_general number of animals used: 151 F2 males 1554311