Gen1 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 6 | 39,666,675 - 39,697,480 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 6 | 33,947,599 - 33,978,461 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 6 | 33,948,206 - 33,978,401 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 6 | 34,241,173 - 34,270,971 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 6 | 34,557,114 - 34,586,912 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 6 | 34,027,879 - 34,057,691 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 6 | 36,910,064 - 36,940,868 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 6 | 36,910,675 - 36,940,868 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 6 | 46,660,177 - 46,690,981 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 6 | 34,679,618 - 34,709,812 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | Celera | 6 | 33,348,660 - 33,378,853 (-) | NCBI | | Celera | | | Cytogenetic Map | 6 | q15 | NCBI | | | | |
|
GEN1 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 2 | 17,753,278 - 17,788,946 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 2 | 17,753,858 - 17,788,946 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 2 | 17,935,136 - 17,970,213 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 2 | 17,798,658 - 17,826,911 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Celera | 2 | 17,815,464 - 17,846,898 (+) | NCBI | | Celera | | | Cytogenetic Map | 2 | p24.2 | NCBI | | | | | HuRef | 2 | 17,710,243 - 17,741,677 (+) | NCBI | | HuRef | | | CHM1_1 | 2 | 17,864,556 - 17,895,909 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 2 | 17,785,078 - 17,820,679 (+) | NCBI | | T2T-CHM13v2.0 | | |
|
Gen1 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 12 | 11,288,929 - 11,316,030 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 12 | 11,288,921 - 11,315,802 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 12 | 11,238,928 - 11,266,029 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 12 | 11,238,920 - 11,265,801 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 12 | 11,247,732 - 11,272,593 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 12 | 11,266,084 - 11,292,109 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 12 | 11,585,054 - 11,610,024 (-) | NCBI | | Celera | | | Cytogenetic Map | 12 | A1.1 | NCBI | | | | | cM Map | 12 | 5.58 | NCBI | | | | |
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Gen1 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955469 | 552,677 - 592,137 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955469 | 552,850 - 590,792 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
|
GEN1 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 12 | 108,744,371 - 108,775,128 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 2A | 108,750,934 - 108,779,084 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 2A | 17,735,953 - 17,766,018 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 2A | 17,861,948 - 17,892,048 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 2A | 17,862,070 - 17,892,048 (+) | Ensembl | panpan1.1 | | panPan2 | |
|
GEN1 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 17 | 13,201,540 - 13,233,028 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 17 | 13,201,777 - 13,232,120 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 17 | 13,153,314 - 13,184,106 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 17 | 13,338,011 - 13,368,882 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 17 | 13,338,028 - 13,370,672 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 17 | 13,196,289 - 13,227,013 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 17 | 13,207,483 - 13,238,260 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 17 | 13,233,389 - 13,264,461 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
|
Gen1 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024406292 | 57,656,411 - 57,682,518 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936493 | 13,157,119 - 13,177,525 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936493 | 13,157,114 - 13,182,797 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
|
GEN1 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 3 | 120,065,973 - 120,097,056 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 3 | 120,067,792 - 120,097,305 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 3 | 128,215,665 - 128,244,806 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
|
GEN1 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 14 | 89,886,102 - 89,917,485 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 14 | 89,888,853 - 89,911,293 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666045 | 22,296,831 - 22,332,300 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Gen1 (Heterocephalus glaber - naked mole-rat) |
|