Emca10 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL: Emca10 (Estrogen-induced mammary cancer QTL 10) Rattus norvegicus

Symbol: Emca10
Name: Estrogen-induced mammary cancer QTL 10
RGD ID: 2292589
Trait: mammary gland integrity trait   (VT:0010552)    
Measurement Type: post-insult time to mammary tumor formation   (CMO:0000345)    
LOD Score: Not Available
P Value: 0.048
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2616,536,140 - 61,536,140RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.061,120,393 - 46,120,393RGD_MAPPER_PIPELINERnor6.0
Rnor_5.061,111,498 - 46,111,498RGDRnor5.0
RGSC_v3.461,301,952 - 46,301,952RGDRGSC3.4
Cross Type: Not Available
Strains Crossed: ACI.COP-(D6Rat80-D6Rat146)/Shul 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain

References

References - curated
1. Kurz SG, etal., Endocrinology. 2008 Apr 17;.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
1564128Vitvitrin61644596616565644Rat
619709Fez2fasciculation and elongation protein zeta 261665457216694628Rat
40956779LOC120093475U2 spliceosomal RNA61667808216678256Rat
1308710Crim1cysteine rich transmembrane BMP regulator 161669586416870264Rat
41357253LOC120103478uncharacterized LOC12010347861681892116820617Rat
2323142LOC100359902hypothetical LOC10035990261688941016892523Rat
1587169LOC679514similar to H3 histone, family 3B61697392316974753Rat
7711568LOC102553200uncharacterized LOC10255320061759201217596460Rat
1592088LOC299524similar to heat shock protein 1, beta61782661217828822Rat
41384706LOC120093228NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12-like61816135018161849Rat
11495481LOC108351326peptidyl-prolyl cis-trans isomerase D pseudogene61881549218816893Rat
41222005LOC120093295U6 spliceosomal RNA61904531919045424Rat
1583780Hspd1-ps11heat shock protein 1, pseudogene 1161927385119276050Rat
41200534LOC120093234uncharacterized LOC12009323461959860619614675Rat
1583779LOC366558similar to suppression of tumorigenicity 1361973853019740177Rat
1583702LOC503015similar to L-lactate dehydrogenase A chain (LDH-A) (LDH muscle subunit) (LDH-M)61977230219773267Rat
1305486Fam98afamily with sequence similarity 98, member A61987408219888744Rat
1304612Rasgrp3RAS guanyl releasing protein 361989536619993945Rat
7676249LOC10254928060S ribosomal protein L32-like61994876019958584Rat
68379Ltbp1latent transforming growth factor beta binding protein 162002962920425339Rat
41098799LOC120103479uncharacterized LOC12010347962008854420109208Rat
11470604LOC10835135640S ribosomal protein S18 pseudogene62045050520450948Rat
41211263LOC120093429small nucleolar RNA SNORA4862053064520530788Rat
1305264Ttc27tetratricopeptide repeat domain 2762055875620702126Rat
11419109LOC108351178uncharacterized LOC10835117862061936220624156Rat
41392415LOC120093282U6 spliceosomal RNA62063098220631088Rat
1307247Birc6baculoviral IAP repeat-containing 662072292220916396Rat
1310157Yipf4Yip1 domain family, member 462095077420962195Rat
1309831Nlrc4NLR family, CARD domain containing 462099178521018254Rat
1309250Slc30a6solute carrier family 30 member 662102093121050785Rat
9086644LOC103692563uncharacterized LOC10369256362105087021070583Rat
1308494Spastspastin62105534921106586Rat
1591362LOC685651similar to ribosomal protein L18a62110843121109299Rat
41372126LOC120103480uncharacterized LOC12010348062111770921120267Rat
708575Dpy30dpy-30 histone methyltransferase complex regulatory subunit62112094721141720Rat
1309929Memo1mediator of cell motility 162114452521234363Rat
41121830LOC120103481small nuclear ribonucleoprotein Sm D2-like62128164221285693Rat
41157183LOC120093229high mobility group protein B2-like62135447221356273Rat
1586183LOC298789hypothetical LOC29878962139209421394047Rat
621480Srd5a2steroid 5 alpha-reductase 262142622521465727Rat
41120104LOC120093428small nucleolar RNA SNORA4862148057021480717Rat
2323407LOC100363233splicing factor 3b, subunit 4-like62151423021515489Rat
62043Xdhxanthine dehydrogenase62153046321592172Rat
41054882LOC120103482uncharacterized LOC12010348262163784821640510Rat
621762Ehd3EH-domain containing 362164086121665601Rat
40933028LOC120103483uncharacterized LOC12010348362167718321701385Rat
1310068Galnt14polypeptide N-acetylgalactosaminyltransferase 1462175603921977533Rat
1562682Capn13calpain 1362207184522166864Rat
1589005LOC685881hypothetical protein LOC68588162218317022183947Rat
7531265LOC102547438uncharacterized LOC10254743862221412822219472Rat
1565906Lclat1lysocardiolipin acyltransferase 162222893322373246Rat
41195560LOC120093473small nucleolar RNA SNORA1762229186222291977Rat
6488952LOC100912066uncharacterized LOC10091206662237331622421143Rat
11440644LOC108351184uncharacterized LOC10835118462253829522551745Rat
1584525LbhLBH regulator of WNT signaling pathway62256923822593056Rat
1309657Ypel5yippee-like 562265628422671741Rat
9094701LOC103692567uncharacterized LOC10369256762278448722840562Rat
628622AlkALK receptor tyrosine kinase62287965323599636Rat
11422410LOC108351183uncharacterized LOC10835118362289723523002084Rat
1359510LOC298795similar to 14-3-3 protein sigma62296515122966436Rat
11394189LOC108351180uncharacterized LOC10835118062338229823394542Rat
41090021LOC120093199uncharacterized LOC12009319962359772923601000Rat
1311049Clip4CAP-GLY domain containing linker protein family, member 462361628023697625Rat
41214795LOC120103484uncharacterized LOC12010348462371858023729231Rat
1304963Pcarephotoreceptor cilium actin regulator62374970023758419Rat
1310677Togaram2TOG array regulator of axonemal microtubules 262377097923828884Rat
1565005Wdr43WD repeat domain 4362384549923884846Rat
41351625LOC120093417small nucleolar RNA SNORD53/SNORD9262386066023860735Rat
40956032LOC120093416small nucleolar RNA SNORD53/SNORD9262386137723861454Rat
41332489LOC120093418small nucleolar RNA SNORD53/SNORD9262387062723870715Rat
11359993Trnac-gca30transfer RNA cysteine (anticodon GCA) 3062389874323898814Rat
621730Spdyaspeedy/RINGO cell cycle regulator family member A62390557423954926Rat
3376Ppp1cbprotein phosphatase 1 catalytic subunit beta62395881323992841Rat
621565Plb1phospholipase B162408705124227167Rat
41338793LOC120103485uncharacterized LOC12010348562409263424098070Rat
41370147LOC120103486uncharacterized LOC12010348662422990424234680Rat
1597860LOC683819hypothetical protein LOC68381962426322324276159Rat
2628Fosl2FOS like 2, AP-1 transcription factor subunit62429789824319157Rat
735111Babam2BRISC and BRCA1 A complex member 262436902124833335Rat
1310064Rbksribokinase62474765124824290Rat
2322809Mrpl33mitochondrial ribosomal protein L3362482580424834061Rat
7699142LOC102548914uncharacterized LOC10254891462489341324897027Rat
1307080Slc4a1apsolute carrier family 4 member 1 adaptor protein62490594124933651Rat
1562206Supt7lSPT7 like, STAGA complex subunit gamma62493394124944656Rat
1589985Gpn1GPN-loop GTPase 162494735024965025Rat
1560110RGD1560110similar to RIKEN cDNA 4930548H2462497062824974554Rat
1561526Zfp512zinc finger protein 51262497690325007913Rat
40973887C6H2orf16chromosome 6 C2orf16 homolog62501036925021155Rat
7513610LOC102556504titin-like62502371825040928Rat
2671Gckrglucokinase regulator62504459225075834Rat
6496095Fndc4fibronectin type III domain containing 462507715525080812Rat
620744Ift172intraflagellar transport 17262508193325121271Rat
1596516Krtcap3keratinocyte associated protein 362512093825122522Rat
1589575Nrbp1nuclear receptor binding protein 162512263525133209Rat
628676Ppm1gprotein phosphatase, Mg2+/Mn2+ dependent, 1G62515355625173763Rat
1310456Zfp513zinc finger protein 51362517417825177442Rat
1306424Snx17sorting nexin 1762517752825183001Rat
620208Eif2b4eukaryotic translation initiation factor 2B subunit delta62518317725188832Rat
1560392Gtf3c2general transcription factor IIIC subunit 262519643925221338Rat
1310512Mpv17mitochondrial inner membrane protein MPV1762522166825236241Rat
3929Ucnurocortin62523812025238950Rat
1306453Trim54tripartite motif-containing 5462523934025258511Rat
1307426Dnajc5gDnaJ heat shock protein family (Hsp40) member C5 gamma62526008725264251Rat
1359689Slc30a3solute carrier family 30 member 362526431025284720Rat
1588606Cadcarbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase62529213325315176Rat
1311605Atraidall-trans retinoic acid-induced differentiation factor62531523625319804Rat
69648Slc5a6solute carrier family 5 member 662531918725331713Rat
1586500Tcf23transcription factor 2362539788925406639Rat
2315526Prr30proline rich 3062541506925417582Rat
61929Prebprolactin regulatory element binding62541880525422594Rat
1310988Abhd1abhydrolase domain containing 162542252625427514Rat
620801Cgref1cell growth regulator with EF hand domain 162543184625443853Rat
2966Khkketohexokinase62544529825455834Rat
1311209Emilin1elastin microfibril interfacer 162545597425463736Rat
2300150Ost4oligosaccharyltransferase complex subunit 4, non-catalytic62547125425472478Rat
1598311Agbl5AGBL carboxypeptidase 562547233325492173Rat
41271759LOC120103487uncharacterized LOC12010348762548093725484921Rat
11476312Trnay-gua3transfer RNA tyrosine (anticodon GUA) 362549153925491627Rat
1311324Tmem214transmembrane protein 21462550157525510444Rat
1359297Mapre3microtubule-associated protein, RP/EB family, member 362551380025558876Rat
11517696LOC108351190uncharacterized LOC10835119062552514825527188Rat
11363564LOC108351187uncharacterized LOC10835118762555868925575141Rat
11489826LOC10835118660S ribosomal protein L37 pseudogene62556729625572674Rat
620467Dpysl5dihydropyrimidinase-like 562557510425659422Rat
40940627LOC120103488uncharacterized LOC12010348862559277325597636Rat
41105934LOC120093431small nucleolar RNA SNORA4862569824225698386Rat
1563607Cenpacentromere protein A62570014225711767Rat
1309228Slc35f6solute carrier family 35, member F662572582225737720Rat
61997Kcnk3potassium two pore domain channel subfamily K member 362576148725799153Rat
1584147Cib4calcium and integrin binding family member 462584260525903509Rat
1559683Fam166cfamily with sequence similarity 166 member C62590529425923615Rat
620646Otofotoferlin62592801826024631Rat
1359318Drc1dynein regulatory complex subunit 162602500426059438Rat
1560938Selenoiselenoprotein I62607312726111326Rat
41352920LOC120103489uncharacterized LOC12010348962611151226117344Rat
1305868Adgrf3adhesion G protein-coupled receptor F362613309726144656Rat
620513Hadhbhydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta62615357226187668Rat
620512Hadhahydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha62618796926227605Rat
1597138Garem2GRB2 associated regulator of MAPK1 subtype 262622896526255576Rat
40992611LOC120103490histone-binding protein RBBP4-like62624756526254076Rat
620879Rab10RAB10, member RAS oncogene family62626708126319739Rat
41285196LOC120103491uncharacterized LOC12010349162635020226357723Rat
621538Kif3ckinesin family member 3C62636709226406033Rat
41378379LOC120103492uncharacterized LOC12010349262640656226425702Rat
1304710Asxl2ASXL transcriptional regulator 262642501726514899Rat
9083598LOC103692577RNA pseudouridylate synthase domain-containing protein 4 pseudogene62646679426470463Rat
1309579Dtnbdystrobrevin, beta62656641826763467Rat
41082100LOC120103493transcription factor BTF3-like62661607626616536Rat
1303336Dnmt3aDNA methyltransferase 3 alpha62679151726902161Rat
41024468LOC120103494uncharacterized LOC12010349462683790626842773Rat
1565766RGD1565766hypothetical gene supported by BC088468; NM_00100971262692360526924789Rat
3366Pomcproopiomelanocortin62693984426945666Rat
1310845Efr3bEFR3 homolog B62694743627021113Rat
41181501LOC120103495uncharacterized LOC12010349562697743626981215Rat
1564414Dnajc27DnaJ heat shock protein family (Hsp40) member C2762706871327098449Rat
41044806LOC120103496cytochrome c oxidase subunit 7B, mitochondrial-like62709286427093103Rat
71009Adcy3adenylate cyclase 362710008927203686Rat
41355253LOC120103497general transcription factor IIH subunit 5-like62710920927114478Rat
1590328Cenpocentromere protein O62720364227218394Rat
1561792Ptrhd1peptidyl-tRNA hydrolase domain containing 162721841727221805Rat
1309046Ncoa1nuclear receptor coactivator 162723260927507992Rat
41192041NEWGENE_40938314transfer RNA serine (anticodon AGA)62736179227361866Rat
41130274LOC120103499uncharacterized LOC12010349962759826827610933Rat
1590890Itsn2intersectin 262761664527727373Rat
41314820LOC12010349860S ribosomal protein L29-like62767264127673318Rat
1359275Fam228afamily with sequence similarity 228, member A62772798227750140Rat
2324744Fam228bfamily with sequence similarity 228, member B62775450527786578Rat
1359707Pfn4profilin family, member 462778661927796710Rat
41235940LOC120093231tumor protein p53 inducible protein 362781832727827030Rat
2318878Sf3b6splicing factor 3B, subunit 662782604427835086Rat
61835Fkbp1bFKBP prolyl isomerase 1B62783212827850600Rat
1563701WdcpWD repeat and coiled coil containing62785068227865540Rat
41010483LOC120093289U6 spliceosomal RNA62785483627854942Rat
1561716Mfsd2bmajor facilitator superfamily domain containing 2B62787018227883768Rat
1589027Ubxn2aUBX domain protein 2A62788425327912709Rat
1566199Atad2bATPase family, AAA domain containing 2B62791454628070103Rat
1311076Klhl29kelch-like family member 2962808648928390647Rat
41117001LOC120103500uncharacterized LOC12010350062818620528199533Rat
9118293LOC103692581uncharacterized LOC10369258162839075528432893Rat
41399269LOC120103501uncharacterized LOC12010350162840401628424608Rat
41035754LOC120103502uncharacterized LOC12010350262847496128502949Rat
41256725LOC120093235uncharacterized LOC12009323562877305628774724Rat
40962240LOC120103503uncharacterized LOC12010350362890901828932289Rat
1587970LOC684602similar to vaccinia related kinase 362925091229252250Rat
41242608LOC120103504uncharacterized LOC12010350462997897729993828Rat
41318895LOC120103506uncharacterized LOC12010350663002077530152258Rat
41142915LOC120103505snurportin-1-like63004191030045502Rat
1590889LOC313946similar to 60S ribosomal protein L1363024526430245810Rat
7630115LOC102556100uncharacterized LOC10255610063025983130279176Rat
11391888LOC108351199uncharacterized LOC10835119963038318130394782Rat
7683264LOC102556187uncharacterized LOC10255618763057492930643987Rat
7716193Tdrd15tudor domain containing 1563074195630818500Rat
2129Apobapolipoprotein B63084438630883983Rat
6500147LOC100910118cyclin-F-like63089074330894066Rat
9474178LOC103692595uncharacterized LOC10369259563093947530978475Rat
1311648Ldahlipid droplet associated hydrolase63108204531166625Rat
620105Gdf7growth differentiation factor 763117149531182447Rat
1311331Hs1bp3HCLS1 binding protein 363119251931222835Rat
41376624LOC120103507uncharacterized LOC12010350763122348331237342Rat
7724923LOC102550373uncharacterized LOC10255037363123585431257835Rat
7709376LOC102550498uncharacterized LOC10255049863130220831315038Rat
41247007LOC120103508uncharacterized LOC12010350863133071531352097Rat
621309Rhobras homolog family member B63136375231365926Rat
11426161LOC108351200uncharacterized LOC10835120063137405231393357Rat
1560726Slc7a15solute carrier family 7 (cationic amino acid transporter, y+ system), member 1563140374731415231Rat
1311024Pum2pumilio RNA-binding family member 263146287931542976Rat
3648Sdc1syndecan 163156279931585267Rat
2322698LOC100360151ribosomal protein S21-like63169314731693780Rat
735179Laptm4alysosomal protein transmembrane 4 alpha63171937831737007Rat
1305085Matn3matrilin 363174838331768101Rat
40959945LOC120103509uncharacterized LOC12010350963177090431771377Rat
1564116Wdr35WD repeat domain 3563177131531831450Rat
1585566Ttc32tetratricopeptide repeat domain 3263183439631841293Rat
1588772LOC689716hypothetical protein LOC68971663187550231877647Rat
41365188LOC120103510uncharacterized LOC12010351063217672032193316Rat
1311807Osr1odd-skipped related transcription factor 163236956132380822Rat
11455275LOC108351357uncharacterized LOC10835135763250607332514115Rat
41135996LOC120103511uncharacterized LOC12010351163284009332845749Rat
7581350LOC10254750460S ribosomal protein L38-like63312857633138078Rat
1309705Nt5c1b5'-nucleotidase, cytosolic IB63313905333156489Rat
1565196Rdh14retinol dehydrogenase 1463315656933161712Rat
41370558LOC120103512uncharacterized LOC12010351263325562533325526Rat
41281285LOC120103513uncharacterized LOC12010351363344774633451185Rat
6494941LOC100911076presenilins-associated rhomboid-like protein, mitochondrial-like63377856133782700Rat
621527Kcns3potassium voltage-gated channel, modifier subfamily S, member 363380831433865018Rat
1587516Msgn1mesogenin 163391278733913427Rat
1559792Gen1GEN1 Holliday junction 5' flap endonuclease63394759933978461Rat
7591084LOC102547959uncharacterized LOC10254795963395953233962509Rat
1311214Smc6structural maintenance of chromosomes 663397873034033201Rat
3966Vsnl1visinin-like 163403864134159479Rat
1583700LOC503019similar to mitochondrial ribosomal protein S1063417823034178737Rat
2322652Rad51ap2RAD51 associated protein 263418131534190682Rat
1586345LOC689955similar to heat shock protein 863462402634626138Rat
41331744LOC120093456small nucleolar RNA SNORA1763476947034769595Rat
1586329LOC689971similar to histone aminotransferase 163484247134843593Rat
1586335LOC689965similar to ribosomal protein L2763486773334868179Rat
1305961CyriaCYFIP related Rac1 interactor A63504520835150669Rat
2322296LOC100360357cytochrome c oxidase, subunit VIIc-like63532699535327273Rat
1565679RGD1565679similar to 60S ribosomal protein L27a (L29)63550130035501734Rat
11423259LOC10835120140S ribosomal protein S15a pseudogene63553599935536604Rat
11364133Trnav-uac3transfer RNA valine (anticodon UAC) 363558021135580283Rat
41335282LOC120093419small nucleolar RNA SNORA1563559727935597405Rat
1584995MycnMYCN proto-oncogene, bHLH transcription factor63571776435723590Rat
9410455LOC10369261140S ribosomal protein S16-like63573100135731699Rat
619903Ddx1DEAD-box helicase 163599646936027340Rat
1585140NbasNBAS subunit of NRZ tethering complex63604835736353206Rat
11488723LOC108351202ferritin light chain 1 pseudogene63614641136147701Rat
41070163LOC120103514uncharacterized LOC12010351463621250936215589Rat
41388044LOC120103515uncharacterized LOC12010351563638231536391016Rat
7549521LOC102548773uncharacterized LOC10254877363639124136425346Rat
1585125LOC690088similar to mortality factor 4 like 163658836636589355Rat
11498460LOC108351358uncharacterized LOC10835135863666987836810264Rat
1305779Lratd1LRAT domain containing 163691696936922143Rat
41193422LOC120103516glyceraldehyde-3-phosphate dehydrogenase-like63695656836962185Rat
2319366LOC100361808F-box and WD repeat domain containing 2-like63721253737214363Rat
7715436LOC102555226uncharacterized LOC10255522663741567537435927Rat
11498435LOC108351205uncharacterized LOC10835120563750642637610011Rat
41258020LOC120103517uncharacterized LOC12010351763761035837694325Rat
11377656LOC108351206uncharacterized LOC10835120663764487437720487Rat
1584006LOC690166similar to Eukaryotic translation initiation factor 3 subunit 9 (eIF-3 eta) (eIF3 p116) (eIF3 p110) (eIF3b) (Prt1 homolog) (hPrt1)63785599437858259Rat
41075541NEWGENE_40964986transfer RNA alanine (anticodon GGC)63795137037951450Rat
1583858LOC298902similar to thymine DNA glycosylase isoform 263805055838051737Rat
7515781LOC102556604uncharacterized LOC10255660463823057338279335Rat
7557098LOC102555705uncharacterized LOC10255570563832785338348255Rat
41343564LOC120103518uncharacterized LOC12010351863851558538519218Rat
1564451Trib2tribbles pseudokinase 263854597138570349Rat
7657676LOC102555864uncharacterized LOC10255586463872202838728847Rat
7500641LOC102555927uncharacterized LOC10255592763877891638822800Rat
2321713LOC100360644ribosomal protein L11-like63892067338921200Rat
40932412LOC120093236uncharacterized LOC12009323663918573239186930Rat
7501955LOC102550954uncharacterized LOC10255095463925363339290633Rat
1307646Lpin1lipin 163930919839417034Rat
70962Ntsr2neurotensin receptor 263942429739431015Rat
1564091Greb1growth regulating estrogen receptor binding 163944052239562364Rat
631412E2f6E2F transcription factor 663959222439608685Rat
3590Rock2Rho-associated coiled-coil containing protein kinase 263967911639774033Rat
1306818Slc66a3solute carrier family 66 member 363977480139786554Rat
1582838LOC690276hypothetical protein LOC69027663979091339797066Rat
631414Kcnf1potassium voltage-gated channel modifier subfamily F member 163996230139964979Rat
628688Pdia6protein disulfide isomerase family A, member 664006298040080223Rat
1359430Atp6v1c2ATPase H+ transporting V1 subunit C264008054540144199Rat
1359447Nol10nucleolar protein 1064014421740225353Rat
1561890RGD1561890similar to craniofacial development protein 164025471740255884Rat
1597342LOC690346hypothetical protein LOC69034664027018740271205Rat
3227Odc1ornithine decarboxylase 164032983140336444Rat
41218949LOC120093421small nucleolar RNA SNORA42/SNORA80 family64033114340331276Rat
7505429LOC102551312uncharacterized LOC10255131264034487840350097Rat
41299246NEWGENE_40933816transfer RNA valine (anticodon AAC)64041593840416018Rat
41314300LOC120093237prothymosin alpha-like64042091940423313Rat
40979901LOC12009323860S ribosomal protein L35-like64042359440425165Rat
708375Hpcal1hippocalcin-like 164047818240584721Rat
1305263Asap2ArfGAP with SH3 domain, ankyrin repeat and PH domain 264065820140821017Rat
41082662LOC120093281U6 spliceosomal RNA64072761140727717Rat
1307810Itgb1bp1integrin subunit beta 1 binding protein 164082069340836074Rat
1305767Cpsf3cleavage and polyadenylation specific factor 364083612140864129Rat
41210651LOC120093425small nucleolar RNA SNORA2164083772240837850Rat
727866Iah1isoamyl acetate hydrolyzing esterase 164086553040872747Rat
620404Adam17ADAM metallopeptidase domain 1764087293640920700Rat
41040147LOC120093315U6 spliceosomal RNA64090153440901635Rat
41197514LOC1200932755S ribosomal RNA64092292240923040Rat
3979Ywhaqtyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta64093571440966240Rat
41212235LOC120093176ragulator complex protein LAMTOR4-like64094746740956705Rat
41194156LOC120093239high mobility group protein B3-like64104322541044515Rat
1596058Taf1bTATA-box binding protein associated factor, RNA polymerase I subunit B64111698041194593Rat
7731406LOC102555986RNA-binding protein 34-like64115112341153682Rat
1305735Grhl1grainyhead-like transcription factor 164120732541257516Rat
1306646Klf11Kruppel-like factor 1164128569941297548Rat
1596023Cys1cystin 164130083641318071Rat
1598310Rrm2ribonucleotide reductase regulatory subunit M264133985841346774Rat
41153839LOC120093240uncharacterized LOC12009324064137743241380036Rat
1305798Mboat2membrane bound O-acyltransferase domain containing 264147113541597599Rat
619949Kidins220kinase D-interacting substrate 22064161820741706990Rat
41007282LOC120093241ubiquinol-cytochrome-c reductase complex assembly factor 3-like64172531141725677Rat
2859Id2inhibitor of DNA binding 264174055641742393Rat
7526561LOC102553989uncharacterized LOC10255398964182949241855070Rat
9103871LOC103692605uncharacterized LOC10369260564190566341914487Rat
9329158LOC103692613NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5-like64193110841931448Rat
7629645LOC102554202uncharacterized LOC10255420264194571541969352Rat
7536096LOC102557053uncharacterized LOC10255705364204746342118475Rat
41346264LOC120093242uncharacterized LOC12009324264226566942283040Rat
41088761LOC120093243uncharacterized LOC12009324364240591042411124Rat
1583774LOC366583similar to D-3-phosphoglycerate dehydrogenase (3-PGDH)64273609142737499Rat
1561737Rnf144aring finger protein 144A64289976743019769Rat
620495Rsad2radical S-adenosyl methionine domain containing 264304651443059737Rat
1305881Cmpk2cytidine/uridine monophosphate kinase 264307370643085183Rat
11370295LOC108351213uncharacterized LOC10835121364322425643252067Rat
6501114LOC100909845phosphoglycerate mutase 1-like64346571843466451Rat
11384778LOC108351214uncharacterized LOC10835121464368784743709249Rat
2318102LOC100362486small nuclear ribonucleoprotein D364380570943825284Rat
69351Sox11SRY-box transcription factor 1164400833344010354Rat
2324519LOC100362535ubiquitin-conjugating enzyme E2E 164412500944125650Rat
41387415LOC120093459small nucleolar RNA SNORA1764430255644302686Rat
9422695LOC103692606uncharacterized LOC10369260664449376444498160Rat
11407553LOC108351362uncharacterized LOC10835136264456576444570039Rat
41264357LOC120093466small nucleolar RNA SNORA1764468879444688925Rat
41262445LOC120093439small nucleolar RNA SNORA1764494854344948677Rat
41119779LOC120093290U6 spliceosomal RNA64499053644990642Rat
2322612LOC100363637nucleophosmin 1-like64507348145074670Rat
1564913Akr1b1-ps1aldo-keto reductase family 1, member B1 (aldose reductase), pseudogene 164508971745090928Rat
1559651Dcdc2cdoublecortin domain containing 2C64510383845179040Rat
621804Allcallantoicase64517918145214275Rat
41178284LOC120093293U6 spliceosomal RNA64520744745207550Rat
1309678Colec11collectin sub-family member 1164522397445256640Rat
61907Rps7ribosomal protein S764526620045271064Rat
1309012Rnaseh1ribonuclease H164528284945292258Rat
727828Adi1acireductone dioxygenase 164530688545313847Rat
1566054Trappc12trafficking protein particle complex subunit 1264532149645386967Rat
1305817Eipr1EARP complex and GARP complex interacting protein 164538845145502089Rat
7747059LOC102555103uncharacterized LOC10255510364580665345830237Rat
7502861LOC102555048uncharacterized LOC10255504864583490845923094Rat
7690279LOC102554981uncharacterized LOC10255498164609135246111068Rat
620550Myt1lmyelin transcription factor 1-like64616474246564234Rat
1560694Pxdnperoxidasin64658074946658345Rat
3900Tpothyroid peroxidase64669840246768199Rat
1311276Sntg2syntrophin, gamma 264680137747003424Rat
1596936LOC678748similar to peroxiredoxin 164706871847072828Rat
41273085LOC120103519uncharacterized LOC12010351964718482147207414Rat
1359389Tmem18transmembrane protein 1864720684547214294Rat
1587117Alkal2ALK and LTK ligand 264749564547505235Rat
2020Acp1acid phosphatase 164750638047522021Rat
1306440Sh3yl1SH3 and SYLF domain containing 164752209847565858Rat
1585983LOC679605similar to HIRA interacting protein 364757559047578182Rat
40977559LOC120093438small nucleolar RNA SNORA1764762512447625256Rat
1564713Fam110cfamily with sequence similarity 110, member C64763846647644723Rat
41147221LOC120093246laminin subunit beta-4-like64769733747811453Rat
9288946LOC103692609serine palmitoyltransferase small subunit A pseudogene64781087547812735Rat
1306311Lamb1laminin subunit beta 164783549247902585Rat
735073Dlddihydrolipoamide dehydrogenase64790415347924814Rat
620623Slc26a3solute carrier family 26 member 364802389248064829Rat
1310703Cbll1Cbl proto-oncogene like 164807119048086174Rat
7499548LOC102555378uncharacterized LOC10255537864808541548115642Rat
3293Slc26a4solute carrier family 26 member 464810757548153762Rat
41012694LOC120103520uncharacterized LOC12010352064813883748147092Rat
11449637LOC108351219uncharacterized LOC10835121964815399448168408Rat
11492151LOC108351220uncharacterized LOC10835122064816873748174227Rat
1359431Bcap29B-cell receptor-associated protein 2964818270248222698Rat
41144586LOC120093200uncharacterized LOC12009320064822301948238183Rat
1311445Dus4ldihydrouridine synthase 4-like64822811148242553Rat
1563296Cog5component of oligomeric golgi complex 564824247048545185Rat
1310848Gpr22G protein-coupled receptor 2264830961948317864Rat
620444Hbp1HMG-box transcription factor 164852963348555775Rat
7663848LOC10255564560S ribosomal protein L18a-like64854389348544447Rat
3394Prkar2bprotein kinase cAMP-dependent type II regulatory subunit beta64856365948653933Rat
41021534LOC120093368U1 spliceosomal RNA64866660248666749Rat
1306468Pik3cgphosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit gamma64876677848802098Rat
41158901LOC120103521uncharacterized LOC12010352164878218648787040Rat
2320310LOC100361355hypothetical LOC10036135564887518648877852Rat
41344174LOC120093495U4 spliceosomal RNA64895729148957480Rat
1560812Ccdc71lcoiled-coil domain containing 71-like64895991348964112Rat
2321896LOC100360561Nxt2 protein-like64901409149014679Rat
11468726LOC108351221uncharacterized LOC10835122164903314549287627Rat
1598099LOC679971similar to carbonic anhydrase 1364939618149396963Rat
40944820LOC120093433small nucleolar RNA SNORA4864941353149413674Rat
631365Namptnicotinamide phosphoribosyltransferase64942531649462109Rat
41143542LOC120093248meteorin-like protein64954253649543619Rat
41201218LOC120093249coiled-coil domain-containing protein 69-like64954363749544171Rat
41060377LOC120103415protein HEXIM2-like64954466449545948Rat
7542438LOC102547473uncharacterized LOC10254747364955278549565067Rat
1359569Sypl1synaptophysin-like 164956511149585205Rat
41266620LOC120093480U6atac minor spliceosomal RNA64960520949605327Rat
1591286Cdhr3cadherin-related family member 364964183349702016Rat
7719070LOC102547703uncharacterized LOC10254770364972940349759830Rat
1305730Atxn7l1ataxin 7-like 164975987649982323Rat
7563724LOC102549100uncharacterized LOC10254910064990353049911102Rat
1307943Efcab10EF-hand calcium binding domain 1065000447950011398Rat
11378331LOC108351223uncharacterized LOC10835122365001440650029376Rat
41216074LOC12010341660S ribosomal protein L22-like 165002995150032039Rat
1307824Polr1fRNA polymerase I subunit F65005328950070514Rat
41186807LOC120093447small nucleolar RNA SNORA1765009137850091506Rat
1595482LOC680142similar to translocase of outer mitochondrial membrane 70 homolog A65012491150127154Rat
6486238LOC10091255640S ribosomal protein SA-like65014805050149675Rat
41134593LOC120093452small nucleolar RNA SNORA1765017897850179105Rat
11406804LOC10835133160S ribosomal protein L24 pseudogene65027803950283600Rat
1595449LOC680175similar to 40S ribosomal protein S2065063628350636717Rat
1311812Ferd3lFer3-like bHLH transcription factor65064537950646268Rat
41169746LOC120103417peptidyl-prolyl cis-trans isomerase NIMA-interacting 4-like65064794850648344Rat
621455Twist1twist family bHLH transcription factor 165067491050676904Rat
41104462LOC120093244uncharacterized LOC12009324465074508650754911Rat
1594139LOC680293similar to developmental pluripotency associated 4 isoform 165074524350745986Rat
1310748Hdac9histone deacetylase 965076207451624311Rat
40966473LOC120093437small nucleolar RNA SNORA1765161246051612591Rat
1306328Prps1l1phosphoribosyl pyrophosphate synthetase 1-like 165168496051686650Rat
1309778Snx13sorting nexin 1365175825851862260Rat
1592964LOC680365similar to tumor rejection antigen gp9665201194452016665Rat
41220337LOC120093245uncharacterized LOC12009324565202036452038707Rat
2074Ahraryl hydrocarbon receptor65223408952271568Rat
7734313LOC102554773uncharacterized LOC10255477365227207752308265Rat
1598279LOC366601similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)65235656352357905Rat
1565406Agr3anterior gradient 3, protein disulphide isomerase family member65264339152666638Rat
41101643LOC120103522glyceraldehyde-3-phosphate dehydrogenase-like65268183352686334Rat
1304606Agr2anterior gradient 2, protein disulphide isomerase family member65270860252729378Rat
1311788Tspan13tetraspanin 1365273874852765503Rat
41071680LOC120103523uncharacterized LOC12010352365274945052765273Rat
621507Bzw2basic leucine zipper and W2 domains 265282806952888599Rat
1306017Ankmy2ankyrin repeat and MYND domain containing 265288896352930341Rat
7502513LOC102556505non-POU domain-containing octamer-binding protein-like65290116152904787Rat
1560395Lrrc72leucine rich repeat containing 7265293538752995552Rat
41110432LOC120093177protein max-like65294876252950726Rat
11382383LOC10835133240S ribosomal protein S26-like65298065552996561Rat
628877Sostdc1sclerostin domain containing 165305133653055510Rat
41059523LOC120093435small nucleolar RNA SNORA4865307013453070273Rat
40986010LOC120093463small nucleolar RNA SNORA1765311671453116830Rat
1359368CrppaCDP-L-ribitol pyrophosphorylase A65312026453397030Rat
9299213LOC103692610coiled-coil-helix-coiled-coil-helix domain-containing protein 2, mitochondrial pseudogene65330935553311115Rat
11479069LOC108351226uncharacterized LOC10835122665362952753640141Rat
40964578LOC120093123heterogeneous nuclear ribonucleoprotein A1-like65369794153700119Rat
2324155LOC100362703heterogeneous nuclear ribonucleoprotein A1-like65372363653732973Rat
41195695LOC120093493small nucleolar RNA U365380824353808325Rat
3079Meox2mesenchyme homeobox 265385676053917467Rat
2319740LOC100361632hypothetical LOC10036163265395086753951745Rat
1312038Agmoalkylglycerol monooxygenase65398623654317838Rat
41165480LOC120093298U6 spliceosomal RNA65422698154227085Rat
11398630LOC108351227uncharacterized LOC10835122765434308154383179Rat
11518989LOC108351363uncharacterized LOC10835136365438326654384851Rat
1563613RGD1563613similar to 40S ribosomal protein S2565452133554521746Rat
2488Dgkbdiacylglycerol kinase, beta65464094855397210Rat
7669283LOC102549779actin, cytoplasmic 2-like65472120154722310Rat
9263034LOC103692620thyroid hormone receptor-associated protein 3 pseudogene65483121154835676Rat
2323883LOC100362896prostatic binding protein-like65554026455540821Rat
1312007Etv1ETS variant transcription factor 165559014955681784Rat
41312804LOC12010341860S acidic ribosomal protein P0-like65568605455686977Rat
41157524LOC120103524uncharacterized LOC12010352465595678756049486Rat
41034983LOC120093442small nucleolar RNA SNORA1765639963256399763Rat
2323695LOC100362999hsc70-interacting protein-like65643522256436810Rat
1305611Smarce1lSWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1-like65650447856505695Rat
41392365LOC120093451small nucleolar RNA SNORA1765658492756585050Rat
41025079LOC120093443U2 spliceosomal RNA65660011356600288Rat
41252109LOC120103419uncharacterized LOC12010341965662851656640670Rat
41263556LOC120093490U2 spliceosomal RNA65662950456629658Rat
1560073RGD1560073similar to ribosomal protein S1065666910356669605Rat
40972876LOC12009324760S ribosomal protein L29-like65688837256888994Rat
1588211LOC680755similar to B-cell receptor-associated protein 3765698154956986759Rat
2152Arl4aADP-ribosylation factor like GTPase 4A65707949657084156Rat
7630539LOC102551566uncharacterized LOC10255156665708443557089606Rat
735034Scinscinderin65711012857188059Rat
1587073Lsmem1leucine-rich single-pass membrane protein 165725022157262240Rat
2867Ifrd1interferon-related developmental regulator 165726939557317833Rat
1583856Zfp277zinc finger protein 27765738394457512785Rat
41008057LOC120093202uncharacterized LOC12009320265750914557509600Rat
1561724Dock4dedicator of cytokinesis 465751292957902597Rat
40999746LOC120093201uncharacterized LOC12009320165753973457559955Rat
9392136LOC103692617transcription elongation factor B polypeptide 1 pseudogene65793654257936849Rat
2323665Immp2linner mitochondrial membrane peptidase subunit 265807003558970165Rat
2323872LOC100359421histone H3.3B-like65809993058101667Rat
7500279LOC102552766uncharacterized LOC10255276665815077658186306Rat
41339141LOC120093204uncharacterized LOC12009320465819694858227730Rat
40934694LOC120093461small nucleolar RNA SNORA1765839618358396315Rat
41334056LOC120093203uncharacterized LOC12009320365841472558430740Rat
71066Lrrn3leucine rich repeat neuronal 365848906058520322Rat
41268906LOC120103525uncharacterized LOC12010352565940358259425212Rat
1589745Ndufa10l1NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 10-like 165987981959881252Rat
9072809LOC103692621oligosaccharyltransferase complex subunit OSTC pseudogene66043133660453277Rat
11403672LOC108351228uncharacterized LOC10835122866052476360536010Rat
41279995LOC120093283U6 spliceosomal RNA66060760760607713Rat
3070Dnajb9DnaJ heat shock protein family (Hsp40) member B966127038561276795Rat
41003040LOC120103526uncharacterized LOC12010352666127517661282214Rat
9352471LOC103692619uncharacterized LOC10369261966128222161329753Rat
1583553LOC681138similar to DnaJ (Hsp40) homolog, subfamily B, member 666129754961299049Rat
1311444Pnpla8patatin-like phospholipase domain containing 866132981061391736Rat
3209Nrcamneuronal cell adhesion molecule66140281361698536Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
11141D6Arb1230364865776548658068Ratregion
33828D6Mit918663330939133309549Ratregion
33977D6Mit424065773029457730540Ratregion
34072D6Mgh717764579008845790265Ratregion
34138D6Mgh812563207442832074553Ratregion
11488D6Arb721763403955034039769Ratregion
37222D6Rat8221964298481642985033Ratregion
37298D6Rat10521561872366018723879Ratregion
37392D6Rat9323064343264943432879Ratregion
37410D6Rat10717961952217919522352Ratregion
37562D6Rat7714862266434522664497Ratregion
35235D6Rat2913063813689338137023Ratregion
35338D6Rat3116264234207842342232Ratregion
35390D6Rat3614063509870935098849Ratregion
35396D6Rat3517063443413734434305Ratregion
35507D6Rat4317261995589919956076Ratregion
35531D6Rat3814963403951834039669Ratregion
37000D6Rat18015561749359817493753Ratregion
37046D6Rat5212163541471835414835Ratregion
37142D6Rat8024461653614016536392Ratregion
37662D6Rat9224563967147639671747Ratregion
37704D6Rat5817865778652357786753Ratregion
37704D6Rat5817865778652357786723Ratregion
37746D6Rat9619963855205338552278Ratregion
36534D6Rat3217264164972641649891Ratregion
36560D6Rat3415063971455039714722Ratregion
36586D6Rat2614065464100154641141Ratregion
36648D7Rat3817465907619559076366Ratregion
36787D6Rat3716763569161835691785Ratregion
34843D6Rat4014161653624316536392Ratregion
35036D6Rat2412566148089561481017Ratregion
35134D6Rat4121062086642220866681Ratregion
35579D6Rat5415562295900922959164Ratregion
35583D6Rat5015066128390461284075Ratregion
35653D6Rat4214561998791119988050Ratregion
35683D6Rat3913862033877720338915Ratregion
35943D6Rat3013264737056447370696Ratregion
35979D6Rat5316862958440029584568Ratregion
39848D6Rat14315863686871236868865Ratregion
39924D6Rat14120163875148238751689Ratregion
39972D6Rat13222165081844550818672Ratregion
38080D6Rat9513165289524052895390Ratregion
38220D6Rat6721364255907842559313Ratregion
40412D6Rat17615862791705027917198Ratregion
40624D6Rat14824662089406520894315Ratregion
38562D6Rat8924262739266627392902Ratregion
38724D6Rat8622461952513319525367Ratregion
38758D6Rat8313664025737440257518Ratregion
40004D6Rat15719962437076624370973Ratregion
40220D6Rat15617462694691626947057Ratregion
40240D6Rat13313764887386348873992Ratregion
38930D6Rat6124564257507842575327Ratregion
39022D6Rat6022565197672351976936Ratregion
39232D6Rat9914065652904456529174Ratregion
39342D6Rat7423962142019621420428Ratregion
39342D6Rat7423962142019621420428Ratregion
39450D6Rat13824964054393340544194Ratregion
42202D6Arb516063411286734113027Ratregion
42776D6Rat20914962091964020919815Ratregion
42777D6Rat17246562095268420953163Ratregion
42778D6Rat17113862726160927261739Ratregion
42779D6Rat22824563512897435129218Ratregion
42781D6Rat20720964156247541562698Ratregion
42782D6Rat20620564747401347474227Ratregion
42783D6Rat20514965391391853914055Ratregion
42785D6Rat16816965617434056174415Ratregion
42787D6Rat20211765901136759011478Ratregion
42788D6Rat20423866136247361362692Ratregion
41244D6Rat13515164780750247807653Ratregion
42324D6Rat22324662834493128345175Ratregion
40770D6Rat13923163963405339634300Ratregion
40770D6Rat13923163963395539634300Ratregion
41064D6Rat13419964770999047710185Ratregion
41606D6Rat14416763521491435215248Ratregion
41606D6Rat14416763521491435215081Ratregion
41608D6Rat14227364191223241912500Ratregion
41668D6Rat17022864554687545547114Ratregion
41702D6Rat17924561667266516672914Ratregion
41726D6Rat17824962473073724730980Ratregion
41820D6Rat22213562988655129886690Ratregion
44074D6Got5413764236768142367818Ratregion
44075D6Got5822064343660243436822Ratregion
44076D6Got5517364513215845132331Ratregion
44077D6Got6029664905541549055711Ratregion
44078D6Got6619664982631849826514Ratregion
44079D6Got6423765019586850196103Ratregion
44080D6Got618664931999349320076Ratregion
44081D6Got6318165065626050656438Ratregion
44082D6Got6513565081852050818655Ratregion
44083D6Got6825965133459251334851Ratregion
44084D6Got6217565271828052718455Ratregion
44086D6Got6917665209418652094362Ratregion
44087D6Got6713365212784352127976Ratregion
44089D6Got7011665522499255225108Ratregion
44090D6Got7212665681194256812068Ratregion
44091D6Got7412165813703458137155Ratregion
44092D6Got7324165775583657756077Ratregion
44024D6Got715961700986017010021Ratregion
44025D6Got20418862092140320921591Ratregion
44027D6Got918561998301119983196Ratregion
44029D6Got1516362368006023680221Ratregion
44030D6Got1428362355769923557984Ratregion
44031D6Got1215362315328223153430Ratregion
44032D6Got139062379738623797474Ratregion
44035D6Got1720862587351625873721Ratregion
44038D6Got2129562737592027376215Ratregion
44039D6Got2217362730693527307104Ratregion
44040D6Got1815762747173227471889Ratregion
44040D6Got1815762747173227471889Ratregion
44041D6Got1915562598850625988661Ratregion
44043D6Got19712662765329527653421Ratregion
44044D6Got2321562842296628423183Ratregion
44045D6Got2430062875966028759960Ratregion
44050D6Got4016762898582228985989Ratregion
44054D6Got3113763358620133586338Ratregion
44056D6Got2815562912292329123078Ratregion
44058D6Got2627563330926133309536Ratregion
44059D6Got3825763562070035620954Ratregion
44061D6Got3924763747429237474539Ratregion
44063D6Got3421863537535635375576Ratregion
44064D6Got3313863562072635620864Ratregion
44065D6Got4215063869622538696375Ratregion
44066D6Got4822663999081339991039Ratregion
44067D6Got4911864058269140582809Ratregion
44068D6Got5016164083215440832315Ratregion
44069D6Got5220864098285640983064Ratregion
44070D6Got19923264107509741075329Ratregion
44073D6Got5729464413207044132364Ratregion
60525D6Got2025962618228926182548Ratregion
60530D6Got2515462712070527120860Ratregion
60531D6Got2728963153978931540074Ratregion
60532D6Got2925363270431432704567Ratregion
60535D6Got3513263407368034073812Ratregion
60536D6Got3712963688572536885854Ratregion
60539D6Got4320163850625738506458Ratregion
60540D6Got4423763952980639530031Ratregion
60542D6Got4620463957175439571957Ratregion
60544D6Got5124264174835841748602Ratregion
60545D6Got5624064229693942297179Ratregion
60546D6Got5919964234734642347545Ratregion
60516D6Got1613762671126926711406Ratregion
60429D4Got14714664995905149959119Ratregion
69535D6Uwm314565669615656696289Ratregion
62493D6Uia216362674166526741829Ratregion
62501D6Uia335064485714644857495Ratregion
67223D6Arb1111265485613254856244Ratregion
67229D6Arb2124263594302235943264Ratregion
67277D6Arb836064033503740335394Ratregion
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5080954RH14187915062640746826407618Ratregion
5080980RH14189419863622163736221835Ratregion
5081044RH14193221264087299740873209Ratregion
5085153AW53328119865006777150067969Ratregion
5090569AU04983019964581178945811988Ratregion
5085756BQ19873120362542596425426167Ratregion
5090063AU04952817665630194656302122Ratregion
5090213AU04961718664912277549122961Ratregion
5089223AU04902821765501281955013036Ratregion
5081390AI45455820366133102461331227Ratregion
5082563BE11971015062494387324944023Ratregion
5086040Cgr1119262544348025443672Ratregion
5080860RH14182518363691796136918144Ratregion
5080936RH14186919864308408143084279Ratregion
5081014RH14191421363166297931663192Ratregion
5084436AA8498299565186150951861604Ratregion
5084694AI22904412263185602631856148Ratregion
5082731AI57910710564022515240225257Ratregion
5082789BF39011520262359939823599600Ratregion
5082823BI28112015362787789527878048Ratregion
5082985BF39057416962700469127004860Ratregion
5086195BQ19991416965719399857194167Ratregion
5081214RH14203019762408926124089458Ratregion
5084922AI17177513163931183239311963Ratregion
5086671AI41257815962436339324363552Ratregion
5081547AW43383311063560949135609601Ratregion
5085131BQ19557417464119986641200040Ratregion
5085292AI59852416965391700853917177Ratregion
5083639BE10098615164985943149859582Ratregion
5086703BE11529515362755683127556984Ratregion
5086783BM38673118464125125141251435Ratregion
5085932BM38374917364125223941252412Ratregion
5503595UniSTS:46469211665305446053054576Ratregion
5502943Tomm70a90765012542850126335Ratregion
5503274UniSTS:23769822561988832719888552Ratregion
5503835PPM1G_785753362517319725173730Ratregion
5503847Sostdc119865305429353054491Ratregion
5504244AL03371112362767308127673204Ratregion
5504776PMC99801P125564033232740332582Ratregion
5504312D12S1229E12362622417626224299Ratregion
5504901ha3186140665131026251311668Ratregion
5505357Slc26a415464813580648135960Ratregion
5505448Id212364174494041745063Ratregion
5504965Tpo148464673948946740973Ratregion
5505169Trib228163854610638546387Ratregion
5505412Ndufa1090065988017459881074Ratregion
5505674UniSTS:488924163465168497151686605Ratregion
5505492PCU64649100661791096217911968Ratregion
5505905UniSTS:49603872162718620427186925Ratregion
5505907UniSTS:4960359162517209725172188Ratregion
5506086Myt1l064656094346561525Ratregion
5506336MARC_49992-49993:1124119588:2062542128425421642Ratregion
5506344UniSTS:47890414262566010825660250Ratregion
5506519ADCY3_103481962720279627203615Ratregion
5506927G5411416462517343825173602Ratregion
5506569RAB10_104588262626683826267720Ratregion
5507249AI6395808362709809327098176Ratregion
5507285fb52c09.x187763068607530686952Ratregion
5499565AI327407139463330667033308064Ratregion
5500105UniSTS:23680523863380986533810103Ratregion
5499627MARC_4117-4118:991938388:111164854418148544292Ratregion
5499671MARC_7327-7328:992008337:162265559120955591831Ratregion
5500113UniSTS:23682813764789941447899551Ratregion
5502573RH12541010964007523040076005Ratregion
5500505RH12659020162128221821282416Ratregion
5500695RH8059223162723462727234858Ratregion
5500442fc63b12.x1064067797040678279Ratregion
5500442fc63b12.x1064067795040678279Ratregion
5500459MARC4015-4016062529339225293827Ratregion
5500509RH12691424962114139521141644Ratregion
5500689RH8004618863403893334039121Ratregion
5503380S0226065534932255349902Ratregion
5503778UniSTS:47067645764707231447072784Ratregion
5500959MARC_9961-9962:996688712:139763175324531753642Ratregion
5501580RH6999213164854419848544329Ratregion
5501736MARC_10279-10280:998924900:1100462675511826756122Ratregion
5501786MARC_12189-12190:1004712897:113263484325334843385Ratregion
5501878MARC_16687-16688:1017861800:124862523163725232402Ratregion
5505540D2S171152764769210747693634Ratregion
5501820MARC_13945-13946:1007583817:174764975993649760683Ratregion
5502002MARC_23457-23458:1027109061:146862547283525473303Ratregion
5502026MARC_24055-24056:1030023107:114762512425125124609Ratregion
5502694Emilin1131262546011125461423Ratregion
Position Markers

Flank 1: (D6Rat80)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2616,536,140 - 16,536,392 (-)MAPPER
Rnor_6.061,120,393 - 1,120,644NCBI
Rnor_5.061,111,498 - 1,111,749UniSTS
RGSC_v3.461,301,952 - 1,302,204RGD
RGSC_v3.461,301,953 - 1,302,204UniSTS
RGSC_v3.161,301,953 - 1,302,204RGD
Celera616,183,547 - 16,183,798UniSTS
RH 3.4 Map623.9RGD
RH 3.4 Map623.9UniSTS
RH 2.0 Map6122.3RGD
SHRSP x BN Map618.3999RGD
Cytogenetic Map6q11UniSTS
Cytogenetic Map6q14UniSTS
Flank 2: (D6Rat146)
Rat AssemblyChrPosition (strand)Source
RH 2.0 Map6180.1RGD
SHRSP x BN Map622.8698RGD


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
738023Alc17Alcohol consumption QTL 173.10.003consumption behavior trait (VT:0002069)ethanol drink intake rate to body weight ratio (CMO:0001616)6127574569Rat
1354616Despr12Despair related QTL 120.0012locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)6127574569Rat
1549905Stresp10Stress response QTL 106.830.0066stress-related behavior trait (VT:0010451)number of approaches toward negative stimulus before onset of defensive burying response (CMO:0001960)6127574569Rat
2300176Bmd51Bone mineral density QTL 5111.70.0001femur mineral mass (VT:0010011)bone mineral density (CMO:0001226)6127574569Rat
2300190Bmd52Bone mineral density QTL 5211.20.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)6127574569Rat
1331743Uae28Urinary albumin excretion QTL 284.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)6134235784Rat
1578758Tcas9Tongue tumor susceptibility QTL 93.29tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)6137618905Rat
1598843Cm63Cardiac mass QTL 632.6heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)6139036266Rat
7411603Foco13Food consumption QTL 135.50.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)6141223769Rat
8552962Pigfal16Plasma insulin-like growth factor 1 level QTL 169.4blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)6141223769Rat
7411542Bw127Body weight QTL 1275.50.001body mass (VT:0001259)body weight gain (CMO:0000420)6141223769Rat
9589129Insul24Insulin level QTL 2419.060.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)6141223769Rat
9589048Scfw3Subcutaneous fat weight QTL 34.570.001subcutaneous adipose mass (VT:1000472)abdominal subcutaneous fat pad weight (CMO:0002069)6141223769Rat
2293709Bss23Bone structure and strength QTL 235.180.0001femur morphology trait (VT:0000559)femur cross-sectional area (CMO:0001661)6142487980Rat
2293650Bss31Bone structure and strength QTL 315.050.0001femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)6142487980Rat
2293656Bss28Bone structure and strength QTL 286.790.0001femur morphology trait (VT:0000559)femur midshaft cortical cross-sectional area (CMO:0001663)6142487980Rat
7411584Foco4Food consumption QTL 44.30.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)6142838846Rat
738024Sach5Saccharine consumption QTL 53.90.00039consumption behavior trait (VT:0002069)saccharin intake volume to total fluid intake volume ratio (CMO:0001601)6143394190Rat
2301972Bp325Blood pressure QTL 3254.8arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)6172227641Rat
2293706Bmd20Bone mineral density QTL 204.30.0002femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)6507449719988050Rat
1300128Rf16Renal function QTL 163.89renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)6507449734434305Rat
1300164Rf15Renal function QTL 153.12renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)6507449754641141Rat
1358190Ept1Estrogen-induced pituitary tumorigenesis QTL 14.4pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)6984331220338915Rat
2292616Ept15Estrogen-induced pituitary tumorigenesis QTL 154.4pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)6984331220338915Rat
4145119Mcs25Mammary carcinoma susceptibility QTL 250.0001mammary gland integrity trait (VT:0010552)ratio of deaths to total study population during a period of time (CMO:0001023)610894415110548006Rat
1578665Bss16Bone structure and strength QTL 164.4femur morphology trait (VT:0000559)bone trabecular cross-sectional area (CMO:0002311)61173566972593685Rat
1578668Bmd14Bone mineral density QTL 143.8femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)61173566972593685Rat
10401812Kidm54Kidney mass QTL 54kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)61436878859368788Rat
10401800Kidm49Kidney mass QTL 49kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)61436878859368788Rat
1576309Emca7Estrogen-induced mammary cancer QTL 74mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)615107216107351382Rat
1359023Bp272Blood pressure QTL 2722.5arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)61653614027261739Rat
2292589Emca10Estrogen-induced mammary cancer QTL 100.048mammary gland integrity trait (VT:0010552)post-insult time to mammary tumor formation (CMO:0000345)61653614061536140Rat
1354664Slep2Serum leptin concentration QTL 24.49blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)61653614071636405Rat
1641898Colcr4Colorectal carcinoma resistance QTL43.710.0007intestine integrity trait (VT:0010554)well differentiated malignant colorectal tumor surface area measurement (CMO:0002077)62033877762613667Rat
2293839Kiddil2Kidney dilation QTL 24.8kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)62086642281133036Rat
2293841Kiddil4Kidney dilation QTL 44.4kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)62086642281133036Rat
1331779Rf38Renal function QTL 382.876kidney blood vessel physiology trait (VT:0100012)absolute change in renal vascular resistance (CMO:0001900)63207442872227641Rat
634318Bw118Body weight QTL 1183.55abdominal fat pad mass (VT:1000711)abdominal fat pad weight (CMO:0000088)63330954957730294Rat
6893340Cm77Cardiac mass QTL 770.260.57heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)63330954981132889Rat
1300143Rf14Renal function QTL 142.92renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)63443413777102317Rat
1354632Scl29Serum cholesterol level QTL 293.74blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)63509870971636405Rat
634307Bp141Blood pressure QTL 1414arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)63523041780230417Rat
70199Coreg1Compensatory renal growth QTL 111.8kidney mass (VT:0002707)compensatory renal growth score (CMO:0001894)63569161857730540Rat
9590290Uminl2Urine mineral level QTL 23.960.001urine mineral amount (VT:0015086)urine electrolyte level (CMO:0000593)63878398983783989Rat
9590306Scort18Serum corticosterone level QTL 182.880.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)63878398983783989Rat
9590140Scort4Serum corticosterone level QTL 414.490.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)63878398983783989Rat
634330Pia16Pristane induced arthritis QTL 163.9joint integrity trait (VT:0010548)arthritic paw count (CMO:0001460)645790088104200226Rat
4889848Pur25Proteinuria QTL 25140.003total urine protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)65672856290198260Rat
6893332Cm74Cardiac mass QTL 740.40.64heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)657730540104085867Rat
1558641Cm47Cardiac mass QTL 472.90.001heart mass (VT:0007028)heart wet weight (CMO:0000069)657730540104085867Rat
70176Mcsm1Mammary carcinoma susceptibility modifier QTL 1mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)658632962103632962Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_general software used: ANOVA 2292503
qtl_general inducing agent: 17beta-estradiol (E2) for 28 weeks 2292503
qtl_general measurement method: once or twice per week animals were examined by palpation to detect mammary tumors; median latency=165 days 2292503