Bw118 QTL Report (Rattus norvegicus) - Rat Genome Database
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QTL Registration

QTL: Bw118 (Body weight QTL 118) Rattus norvegicus

Symbol: Bw118
Name: Body weight QTL 118
RGD ID: 634318
Also known as: Dmo6p; Niddm47; Non-insulin dependent diabetes mellitus QTL 47
Trait: abdominal fat pad mass   (VT:1000711)    
Measurement Type: abdominal fat pad weight   (CMO:0000088)    
LOD Score: 3.55
P Value: Not Available
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_6.0636,260,288 - 60,606,186RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0646,021,394 - 70,193,933RGDRnor5.0
RGSC_v3.4634,039,461 - 59,946,628RGDRGSC3.4
RGSC_v3.1634,042,414 - 59,949,755RGD
Cross Type: intercross
Strains Crossed: BN OLETF 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View
obesity  (IAGP)

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain
BN  (IEA)
OLETF  (IEA)

References

References - curated
1. Watanabe TK, etal., Genomics 1999 Jun 15;58(3):233-9.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
6494941LOC100911076presenilins-associated rhomboid-like protein, mitochondrial-like63673733736738464Rat
621527Kcns3potassium voltage-gated channel, modifier subfamily S, member 363676404036819810Rat
1587516Msgn1mesogenin 163687616536876805Rat
1559792Gen1GEN1 Holliday junction 5' flap endonuclease63691006436940868Rat
7591084LOC102547959uncharacterized LOC10254795963691238836928310Rat
1311214Smc6structural maintenance of chromosomes 663694123336995920Rat
3966Vsnl1visinin-like 163700136037121969Rat
1583700LOC503019similar to mitochondrial ribosomal protein S1063714073237141423Rat
2322652Rad51ap2RAD51 associated protein 263714474737151642Rat
9458081LOC103690076RAD51-associated protein 2-like63715673837206070Rat
1586329LOC689971similar to histone aminotransferase 163734037237352990Rat
1586335LOC689965similar to ribosomal protein L2763736404537364495Rat
9160282LOC103692598uncharacterized LOC10369259863747540137479631Rat
1305961CyriaCYFIP related Rac1 interactor A63755516737661196Rat
9261210LOC103692599uncharacterized LOC10369259963757201437576630Rat
2322296LOC100360357cytochrome c oxidase, subunit VIIc-like63783258837832866Rat
1565679RGD1565679similar to 60S ribosomal protein L27a (L29)63800657138052841Rat
11423259LOC10835120140S ribosomal protein S15a pseudogene63804160638042043Rat
11364133Trnav-uac3transfer RNA valine (anticodon UAC) 363808503738085109Rat
1584995MycnMYCN proto-oncogene, bHLH transcription factor63822255438228419Rat
9410455LOC10369261140S ribosomal protein S16-like63823578738236283Rat
619903Ddx1DEAD-box helicase 163842289238453762Rat
1585140NbasNBAS subunit of NRZ tethering complex63847477338777146Rat
11488723LOC108351202ferritin light chain 1 pseudogene63857150438572788Rat
7549521LOC102548773uncharacterized LOC10254877363882286138849103Rat
11372635LOC108351203uncharacterized LOC10835120363884873638856028Rat
1585125LOC690088similar to mortality factor 4 like 163903455439035520Rat
11498460LOC108351358uncharacterized LOC10835135863911489339134890Rat
1305779Lratd1LRAT domain containing 163935828539363458Rat
9446459LOC103692600glyceraldehyde-3-phosphate dehydrogenase pseudogene63940274639403825Rat
11372644LOC108351204uncharacterized LOC10835120463950409739516217Rat
2319366LOC100361808F-box and WD repeat domain containing 2-like63965582239657209Rat
7715436LOC102555226uncharacterized LOC10255522663986161339880583Rat
11498435LOC108351205uncharacterized LOC10835120563997894040056684Rat
11377656LOC108351206uncharacterized LOC10835120664009299340159129Rat
1584006LOC690166similar to Eukaryotic translation initiation factor 3 subunit 9 (eIF-3 eta) (eIF3 p116) (eIF3 p110) (eIF3b) (Prt1 homolog) (hPrt1)64029892140301186Rat
1583858LOC298902similar to thymine DNA glycosylase isoform 264051781940518998Rat
7515781LOC102556604uncharacterized LOC10255660464069432440713350Rat
7557098LOC102555705uncharacterized LOC10255570564080505840828898Rat
1564451Trib2tribbles pseudokinase 264101672241040972Rat
11402704LOC108351208uncharacterized LOC10835120864102456341034056Rat
11396519LOC108351207uncharacterized LOC10835120764105744441069494Rat
9412502LOC103692601uncharacterized LOC10369260164115838341186736Rat
7657676LOC102555864uncharacterized LOC10255586464118620641193574Rat
7500641LOC102555927uncharacterized LOC10255592764124337141263351Rat
9269822LOC103692602uncharacterized LOC10369260264126697441277657Rat
2321713LOC100360644ribosomal protein L11-like64138586641386410Rat
7501955LOC102550954uncharacterized LOC10255095464173769941777065Rat
1307646Lpin1lipin 164179621441905149Rat
70962Ntsr2neurotensin receptor 264191706541923780Rat
1564091Greb1growth regulating estrogen receptor binding 164193294142002770Rat
631412E2f6E2F transcription factor 664209251342108692Rat
3590Rock2Rho-associated coiled-coil containing protein kinase 264218086442289910Rat
1306818Slc66a3solute carrier family 66 member 364229067842302451Rat
1582838LOC690276hypothetical protein LOC69027664230678842313322Rat
631414Kcnf1potassium voltage-gated channel modifier subfamily F member 164247106042473738Rat
11520175LOC108351359uncharacterized LOC10835135964255139442555294Rat
628688Pdia6protein disulfide isomerase family A, member 664256826942585654Rat
1359430Atp6v1c2ATPase H+ transporting V1 subunit C264258545242632289Rat
1359447Nol10nucleolar protein 1064265666142745099Rat
1561890RGD1561890similar to craniofacial development protein 164277746942778374Rat
1597342LOC690346hypothetical protein LOC69034664279285642793963Rat
3227Odc1ornithine decarboxylase 164285252942859142Rat
7505429LOC102551312uncharacterized LOC10255131264286757742872756Rat
11410519LOC108351209uncharacterized LOC10835120964291222542913538Rat
6503469LOC100909414prothymosin alpha-like64294642242946911Rat
1563157RGD1563157similar to 60S ribosomal protein L3564294733442947705Rat
708375Hpcal1hippocalcin-like 164300192043109083Rat
11466675LOC108351210uncharacterized LOC10835121064309926743102006Rat
1305263Asap2ArfGAP with SH3 domain, ankyrin repeat and PH domain 264323117843348606Rat
9303238LOC103692603uncharacterized LOC10369260364327109543275538Rat
7683736LOC102555735arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2-like64334370243348606Rat
1307810Itgb1bp1integrin subunit beta 1 binding protein 164334892743363633Rat
1305767Cpsf3cleavage and polyadenylation specific factor 364336379243391712Rat
727866Iah1isoamyl acetate hydrolyzing esterase 164339311343400330Rat
620404Adam17ADAM metallopeptidase domain 1764340052543448280Rat
3979Ywhaqtyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta64346329443493816Rat
1596058Taf1bTATA-box binding protein associated factor, RNA polymerase I subunit B64364493143722124Rat
7731406LOC102555986RNA-binding protein 34-like64367698443682162Rat
1305735Grhl1grainyhead-like transcription factor 164373483743795757Rat
11410754LOC108351211uncharacterized LOC10835121164379874043817002Rat
1306646Klf11Kruppel-like factor 1164382981243841649Rat
1596023Cys1cystin 164384493743862131Rat
1598310Rrm2ribonucleotide reductase regulatory subunit M264388462743890818Rat
9129113LOC103692612skin secretory protein xP2-like64400720844010249Rat
1305798Mboat2membrane bound O-acyltransferase domain containing 264400987244135501Rat
9236291LOC103692604serine palmitoyltransferase small subunit A pseudogene64414972844150964Rat
619949Kidins220kinase D-interacting substrate 22064422514244322938Rat
2322644LOC100363605hypothetical protein LOC10036360564434076344345208Rat
2859Id2inhibitor of DNA binding 264436007744361908Rat
7750909LOC102553891uncharacterized LOC10255389164437698444380923Rat
7526561LOC102553989uncharacterized LOC10255398964445231544479415Rat
9103871LOC103692605uncharacterized LOC10369260564450822844534604Rat
9329158LOC103692613NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5-like64455036444550731Rat
7629645LOC102554202uncharacterized LOC10255420264457953944590271Rat
7536096LOC102557053uncharacterized LOC10255705364466270144733569Rat
1583774LOC366583similar to D-3-phosphoglycerate dehydrogenase (3-PGDH)64534576145347209Rat
11494199LOC108351360uncharacterized LOC10835136064548393145489525Rat
1561737Rnf144aring finger protein 144A64550989545629233Rat
11391632LOC108351212uncharacterized LOC10835121264562938845660787Rat
620495Rsad2radical S-adenosyl methionine domain containing 264565594745669083Rat
1305881Cmpk2cytidine/uridine monophosphate kinase 264568324245694824Rat
2318155LOC100362433glutathione peroxidase 864575972445783681Rat
7619289LOC102554354uncharacterized LOC10255435464585435645861949Rat
11370295LOC108351213uncharacterized LOC10835121364587996645885026Rat
6501114LOC100909845phosphoglycerate mutase 1-like64609891446099789Rat
11384778LOC108351214uncharacterized LOC10835121464632698746347420Rat
2318102LOC100362486small nuclear ribonucleoprotein D364643330246451961Rat
11367627LOC108351215uncharacterized LOC10835121564644001946445035Rat
11415852LOC108351361uncharacterized LOC10835136164645782246465954Rat
11401899LOC108351216uncharacterized LOC10835121664660699946610980Rat
69351Sox11SRY-box transcription factor 1164662996746631988Rat
2324519LOC100362535ubiquitin-conjugating enzyme E2E 164674572346746364Rat
11387835LOC108351217uncharacterized LOC10835121764686622246906567Rat
9422695LOC103692606uncharacterized LOC10369260664712867847133057Rat
11407553LOC108351362uncharacterized LOC10835136264720085547203480Rat
2322612LOC100363637nucleophosmin 1-like64770545747706646Rat
1564913Akr1b1-ps1aldo-keto reductase family 1, member B1 (aldose reductase), pseudogene 164772399747725275Rat
1559651Dcdc2cdoublecortin domain containing 2C64773781447812219Rat
7730533LOC102549609ferritin light chain 1-like64778577047786982Rat
621804Allcallantoicase64781298947848068Rat
1309678Colec11collectin sub-family member 1164785776747889961Rat
61907Rps7ribosomal protein S764789952547904389Rat
1309012Rnaseh1ribonuclease H164791618847925582Rat
7678865LOC102547240uncharacterized LOC10254724064792927447936339Rat
727828Adi1acireductone dioxygenase 164794021147947173Rat
1566054Trappc12trafficking protein particle complex 1264795482248020280Rat
1305817Eipr1EARP complex and GARP complex interacting protein 164802177148135241Rat
620550Myt1lmyelin transcription factor 1-like64845238548843443Rat
9217337LOC103692607uncharacterized LOC10369260764856564848568127Rat
11364655LOC108351218uncharacterized LOC10835121864860858748745720Rat
1560694Pxdnperoxidasin64886649648982368Rat
3900Tpothyroid peroxidase64902091849089855Rat
1311276Sntg2syntrophin, gamma 264912308449324530Rat
9305061LOC103692608uncharacterized LOC10369260864935129249355077Rat
1596936LOC678748similar to peroxiredoxin 164938971649393857Rat
1359389Tmem18transmembrane protein 1864952922849534960Rat
1587117Alkal2ALK and LTK ligand 264982472549834921Rat
2020Acp1acid phosphatase 164983606449851714Rat
7574537LOC102551379uncharacterized LOC10255137964983854049841368Rat
1306440Sh3yl1SH3 and SYLF domain containing 164985177849895502Rat
1585983LOC679605similar to HIRA interacting protein 364990492149910229Rat
1564713Fam110cfamily with sequence similarity 110, member C64996847349974730Rat
7690279LOC102554981uncharacterized LOC10255498165009753950204592Rat
7502861LOC102555048uncharacterized LOC10255504865028086050370748Rat
7747059LOC102555103uncharacterized LOC10255510365037810650388066Rat
9288946LOC103692609serine palmitoyltransferase small subunit A pseudogene65050212050505751Rat
1306311Lamb1laminin subunit beta 165052879650596593Rat
735073Dlddihydrolipoamide dehydrogenase65059767750618694Rat
620623Slc26a3solute carrier family 26 member 365072508550766306Rat
1310703Cbll1Cbl proto-oncogene like 165077271850786861Rat
7499548LOC102555378uncharacterized LOC10255537865078699350811371Rat
3293Slc26a4solute carrier family 26 member 465080910350848443Rat
11449637LOC108351219uncharacterized LOC10835121965086432650869489Rat
11492151LOC108351220uncharacterized LOC10835122065087336050875303Rat
1359431Bcap29B-cell receptor-associated protein 2965088375850923743Rat
1311445Dus4ldihydrouridine synthase 4-like65092598750943546Rat
1563296Cog5component of oligomeric golgi complex 565095386851230860Rat
1310848Gpr22G protein-coupled receptor 2265101242151021253Rat
620444Hbp1HMG-box transcription factor 165123147951257699Rat
7663848LOC10255564560S ribosomal protein L18a-like65124572551246824Rat
3394Prkar2bprotein kinase cAMP-dependent type II regulatory subunit beta65126550951356383Rat
1306468Pik3cgphosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit gamma65146569651501234Rat
2320310LOC100361355hypothetical LOC10036135565157757451580670Rat
1560812Ccdc71lcoiled-coil domain containing 71-like65165949851666145Rat
11468726LOC108351221uncharacterized LOC10835122165171501351738361Rat
2321896LOC100360561Nxt2 protein-like65171594751716704Rat
11404619LOC108351222uncharacterized LOC10835122265198749751994096Rat
1598099LOC679971similar to carbonic anhydrase 1365209256452093817Rat
631365Namptnicotinamide phosphoribosyltransferase65212208552156473Rat
7745718LOC102547378meteorin-like protein-like65224161652244902Rat
7542438LOC102547473uncharacterized LOC10254747365225275852265855Rat
1359569Sypl1synaptophysin-like 165226592052286037Rat
1591286Cdhr3cadherin-related family member 365234463552402144Rat
7719070LOC102547703uncharacterized LOC10254770365244437752459882Rat
1305730Atxn7l1ataxin 7-like 165245993052680552Rat
7563724LOC102549100uncharacterized LOC10254910065260144352602613Rat
1307943Efcab10EF-hand calcium binding domain 1065270230452709223Rat
11378331LOC108351223uncharacterized LOC10835122365271288352715369Rat
2319872LOC100361597hypothetical LOC10036159765272915052729584Rat
1307824Polr1fRNA polymerase I subunit F65275110652768574Rat
1595482LOC680142similar to translocase of outer mitochondrial membrane 70 homolog A65282226652824509Rat
6486238LOC10091255640S ribosomal protein SA-like65284478952846565Rat
11406804LOC10835133160S ribosomal protein L24 pseudogene65297266652978414Rat
11468431LOC108351224uncharacterized LOC10835122465316157753183865Rat
7578807LOC102552384histone deacetylase 9-like65326971753292537Rat
1595449LOC680175similar to 40S ribosomal protein S2065336254153362956Rat
1311812Ferd3lFer3-like bHLH transcription factor65337170653372596Rat
621455Twist1twist family bHLH transcription factor 165340124153403235Rat
1594139LOC680293similar to developmental pluripotency associated 4 isoform 165346964753470889Rat
1310748Hdac9histone deacetylase 965348736754358694Rat
11367774LOC108351350uncharacterized LOC10835135065433690854341237Rat
11502303LOC108351225uncharacterized LOC10835122565436366554394640Rat
1306328Prps1l1phosphoribosyl pyrophosphate synthetase 1-like 165441790354419593Rat
1309778Snx13sorting nexin 1365448762654591716Rat
1592964LOC680365similar to tumor rejection antigen gp9665474530154750022Rat
2074Ahraryl hydrocarbon receptor65496399055001806Rat
7734313LOC102554773uncharacterized LOC10255477365500192655104972Rat
1598279LOC366601similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)65508415355085871Rat
1565406Agr3anterior gradient 3, protein disulphide isomerase family member65537173855424233Rat
2319740LOC100361632hypothetical LOC10036163265538828655389250Rat
1583857LOC298960similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)65543998955441053Rat
1304606Agr2anterior gradient 2, protein disulphide isomerase family member65546578255487087Rat
1311788Tspan13tetraspanin 1365549765955524415Rat
621507Bzw2basic leucine zipper and W2 domains 265558675455647650Rat
7741315LOC102546420uncharacterized LOC10254642065560596755606620Rat
1306017Ankmy2ankyrin repeat and MYND domain containing 265564690555689223Rat
7502513LOC102556505non-POU domain-containing octamer-binding protein-like65566074955662526Rat
7645608LOC102547138non-POU domain-containing octamer-binding protein-like65566155855662806Rat
1560395Lrrc72leucine rich repeat containing 7265569426955757234Rat
7517562LOC102546494protein max-like65570681455708395Rat
11382383LOC10835133240S ribosomal protein S26-like65575792355758270Rat
628877Sostdc1sclerostin domain containing 165581282055816994Rat
1359368CrppaCDP-L-ribitol pyrophosphorylase A65588013656159466Rat
9299213LOC103692610coiled-coil-helix-coiled-coil-helix domain-containing protein 2, mitochondrial pseudogene65606878456071595Rat
7693349LOC102546794uncharacterized LOC10254679465621627656219734Rat
11479069LOC108351226uncharacterized LOC10835122665640039556411242Rat
2324155LOC100362703heterogeneous nuclear ribonucleoprotein A1-like65646981356504273Rat
3079Meox2mesenchyme homeobox 265662576856689195Rat
1589986Vom2r49vomeronasal 2 receptor, 4965673289156775529Rat
1312038Agmoalkylglycerol monooxygenase65684685957193918Rat
11398630LOC108351227uncharacterized LOC10835122765721938057257946Rat
11518989LOC108351363uncharacterized LOC10835136365725896757263048Rat
1563613RGD1563613similar to 40S ribosomal protein S2565739617857396594Rat
2488Dgkbdiacylglycerol kinase, beta65751635158277385Rat
7669283LOC102549779actin, cytoplasmic 2-like65759695257598103Rat
9263034LOC103692620thyroid hormone receptor-associated protein 3 pseudogene65770752757711961Rat
1589430LOC680646similar to 40S ribosomal protein S265838770358389016Rat
2323883LOC100362896prostatic binding protein-like65841915658419713Rat
1312007Etv1ETS variant transcription factor 165846721558558640Rat
2323695LOC100362999hsc70-interacting protein-like65929989659301508Rat
1305611Smarce1lSWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1-like65936683259368178Rat
7629082LOC102548656igE-binding protein-like65950501359506572Rat
1560073RGD1560073similar to ribosomal protein S1065953104259531582Rat
1588231LOC680735similar to 60S ribosomal protein L17 (L23) (Amino acid starvation-induced protein) (ASI)65966234959662893Rat
1588211LOC680755similar to B-cell receptor-associated protein 3765985009959852546Rat
2152Arl4aADP-ribosylation factor like GTPase 4A65994592659950586Rat
7630539LOC102551566uncharacterized LOC10255156665995078759958981Rat
735034Scinscinderin65997537560055075Rat
9259024LOC103692615uncharacterized LOC10369261566005446960065855Rat
1587073Lsmem1leucine-rich single-pass membrane protein 166011407760124297Rat
2867Ifrd1interferon-related developmental regulator 166013202560151354Rat
7633421LOC102551830uncharacterized LOC10255183066017887060180424Rat
1583856Zfp277zinc finger protein 27766024620960374388Rat
1561724Dock4dedicator of cytokinesis 466037483960782648Rat
9385702LOC103692616uncharacterized LOC10369261666042650560438016Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
11141D6Arb1230365136021551360517Ratregion
33828D6Mit918663626013136260288Ratregion
33977D6Mit424066060618660606431Ratregion
34072D6Mgh717764843275848432934Ratregion
11488D6Arb721763700227037002488Ratregion
37222D6Rat8221964559431945594535Ratregion
37392D6Rat9323064606586946066098Ratregion
35235D6Rat2913064060278240602911Ratregion
35338D6Rat3116264495702744957178Ratregion
35390D6Rat3614063760898037609119Ratregion
35447D6Rat5117064642734746427450Ratregion
35531D6Rat3814963700223837002388Ratregion
37046D6Rat5212163792016937920285Ratregion
37662D6Rat9224564217299942173267Ratregion
37746D6Rat9619964102280541023027Ratregion
36534D6Rat3217264425600544256169Ratregion
36560D6Rat3415064223043642230607Ratregion
36586D6Rat2614065751640057516539Ratregion
36787D6Rat3716763819641238196578Ratregion
35911D6Rat3315664191778641917988Ratregion
35943D6Rat3013264969526449695395Ratregion
39848D6Rat14315863931003139310183Ratregion
39924D6Rat14120164121618941216395Ratregion
39972D6Rat13222165355389253554118Ratregion
38080D6Rat9513165565392355654072Ratregion
38220D6Rat6721364517109045171324Ratregion
38758D6Rat8313664278006242780205Ratregion
40240D6Rat13313765157626251576390Ratregion
38930D6Rat6124564518709145187339Ratregion
39022D6Rat6022565471008254710294Ratregion
39232D6Rat9914065939141359391540Ratregion
39450D6Rat13824964306950243069762Ratregion
39572D6Rat14011464295443542954552Ratregion
42202D6Arb516063707445437074613Ratregion
42779D6Rat22824563763921737639458Ratregion
42781D6Rat20720964410037944100601Ratregion
42782D6Rat20620564980278449802997Ratregion
42783D6Rat20514965668564756685783Ratregion
42785D6Rat16816965904154859042432Ratregion
41244D6Rat13515165050063450500784Ratregion
41444D6Rat13117065664147656641768Ratregion
40770D6Rat13923164213464042134884Ratregion
40770D6Rat13923164213452442134884Ratregion
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5080830RH14180719763687600836876204Ratregion
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5080860RH14182518363935927839359460Ratregion
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5082731AI57910710564274489942745003Ratregion
5086195BQ19991416966006011260060280Ratregion
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5085292AI59852416965668873756688905Ratregion
5083639BE10098615165255818352558333Ratregion
5086783BM38673118464379536043795543Ratregion
5085932BM38374917364379634843796520Ratregion
5503595UniSTS:46469211665581594555816060Ratregion
5502943Tomm70a90765282278452823690Ratregion
5503847Sostdc119865581577855815975Ratregion
5504776PMC99801P125564285502642855280Ratregion
5504901ha3186140665404421054045615Ratregion
5505357Slc26a415465083689450837047Ratregion
5505448Id212364436445644364578Ratregion
5504965Tpo148464906114749062630Ratregion
5505169Trib228164101685841017138Ratregion
5505674UniSTS:488924163465441791554419548Ratregion
5506086Myt1l064884271648843297Ratregion
5500105UniSTS:23680523863676559236765829Ratregion
5499627MARC_4117-4118:991938388:111165124602751246137Ratregion
5499671MARC_7327-7328:992008337:162265846823058468851Ratregion
5500113UniSTS:23682813765059292750593063Ratregion
5502573RH12541010964258066242581436Ratregion
5500442fc63b12.x1064319725443197562Ratregion
5500442fc63b12.x1064319723443197562Ratregion
5500689RH8004618863700165337001840Ratregion
5503380S0226065822923458229814Ratregion
5503778UniSTS:47067645764939331549393784Ratregion
5501580RH6999213165124604451246174Ratregion
5501786MARC_12189-12190:1004712897:113263734115537341286Ratregion
5505540D2S171152765002204050023566Ratregion
5501820MARC_13945-13946:1007583817:174765246000252460748Ratregion
Position Markers

Flank 1: (D6Mit4)
Rat AssemblyChrPosition (strand)Source
Rnor_6.0660,606,186 - 60,606,431NCBI
Rnor_5.0670,193,933 - 70,194,178UniSTS
RGSC_v3.4659,946,628 - 59,946,874RGD
RGSC_v3.4659,946,629 - 59,946,874UniSTS
RGSC_v3.1659,949,755 - 59,950,000RGD
Cytogenetic Map6q21UniSTS
RH 3.4 Map6406.6UniSTS
RH 3.4 Map6406.6RGD
RH 2.0 Map6589.2RGD
Flank 2: (D6Mit9)
Rat AssemblyChrPosition (strand)Source
Rnor_6.0636,260,131 - 36,260,288NCBI
Rnor_5.0646,021,237 - 46,021,394UniSTS
RGSC_v3.4634,039,303 - 34,039,461RGD
RGSC_v3.4634,039,304 - 34,039,461UniSTS
RGSC_v3.1634,042,257 - 34,042,414RGD
Celera632,744,086 - 32,744,243UniSTS
Cytogenetic Map6 RGD
RH 3.4 Map6123.2UniSTS
RH 3.4 Map6123.2RGD
RH 2.0 Map6277.3RGD
SHRSP x BN Map628.5599RGD


QTLs in Region (Rnor_6.0)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1331743Uae28Urinary albumin excretion QTL 284.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)6141917988Rat
9589048Scfw3Subcutaneous fat weight QTL 34.570.001subcutaneous adipose mass (VT:1000472)abdominal subcutaneous fat pad weight (CMO:0002069)6142388212Rat
9589129Insul24Insulin level QTL 2419.060.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)6142388212Rat
7411603Foco13Food consumption QTL 135.50.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)6142388212Rat
7411542Bw127Body weight QTL 1275.50.001body mass (VT:0001259)body weight gain (CMO:0000420)6142388212Rat
8552962Pigfal16Plasma insulin-like growth factor 1 level QTL 169.4blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)6142388212Rat
2293709Bss23Bone structure and strength QTL 235.180.0001femur morphology trait (VT:0000559)femur cross-sectional area (CMO:0001661)6143665660Rat
2293650Bss31Bone structure and strength QTL 315.050.0001femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)6143665660Rat
2293656Bss28Bone structure and strength QTL 286.790.0001femur morphology trait (VT:0000559)femur midshaft cortical cross-sectional area (CMO:0001663)6143665660Rat
7411584Foco4Food consumption QTL 44.30.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)6144015370Rat
738024Sach5Saccharine consumption QTL 53.90.00039consumption behavior trait (VT:0002069)saccharin intake volume to total fluid intake volume ratio (CMO:0001601)6144570292Rat
2301972Bp325Blood pressure QTL 3254.8arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)6175623393Rat
2292589Emca10Estrogen-induced mammary cancer QTL 100.048mammary gland integrity trait (VT:0010552)post-insult time to mammary tumor formation (CMO:0000345)6112039346120393Rat
1354664Slep2Serum leptin concentration QTL 24.49blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)6112039375023446Rat
1576309Emca7Estrogen-induced mammary cancer QTL 74mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)62537030111715717Rat
1578665Bss16Bone structure and strength QTL 164.4femur morphology trait (VT:0000559)bone trabecular cross-sectional area (CMO:0002311)6616172276002731Rat
1578668Bmd14Bone mineral density QTL 143.8femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)6616172276002731Rat
4145119Mcs25Mammary carcinoma susceptibility QTL 250.0001mammary gland integrity trait (VT:0010552)ratio of deaths to total study population during a period of time (CMO:0001023)67009971115379601Rat
634322Bw12Body weight QTL 120body mass (VT:0001259)body weight (CMO:0000012)71017386255173862Rat
1300164Rf15Renal function QTL 153.12renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)61312295857516539Rat
10401812Kidm54Kidney mass QTL 54kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)61681010761810107Rat
10401800Kidm49Kidney mass QTL 49kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)61681010761810107Rat
8552910Pigfal5Plasma insulin-like growth factor 1 level QTL 54.3blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)61941788764417887Rat
1641898Colcr4Colorectal carcinoma resistance QTL43.710.0007intestine integrity trait (VT:0010554)well differentiated malignant colorectal tumor surface area measurement (CMO:0002077)62151530265784818Rat
2293839Kiddil2Kidney dilation QTL 24.8kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)62204285484763421Rat
2293841Kiddil4Kidney dilation QTL 44.4kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)62204285484763421Rat
8693632Alc27Alcohol consumption QTL 272.20.791drinking behavior trait (VT:0001422)calculated ethanol drink intake rate (CMO:0001615)63425776653855198Rat
1300143Rf14Renal function QTL 142.92renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)63436743680490628Rat
1331779Rf38Renal function QTL 382.876kidney blood vessel physiology trait (VT:0100012)absolute change in renal vascular resistance (CMO:0001900)63499565675623393Rat
634318Bw118Body weight QTL 1183.55abdominal fat pad mass (VT:1000711)abdominal fat pad weight (CMO:0000088)63626028860606186Rat
6893340Cm77Cardiac mass QTL 770.260.57heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)63626028884763275Rat
1354632Scl29Serum cholesterol level QTL 293.74blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)63760898075023446Rat
634307Bp141Blood pressure QTL 1414arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)63810630883106308Rat
70199Coreg1Compensatory renal growth QTL 111.8kidney mass (VT:0002707)compensatory renal growth score (CMO:0001894)63819641260606431Rat
9590290Uminl2Urine mineral level QTL 23.960.001urine mineral amount (VT:0015086)urine electrolyte level (CMO:0000593)64167904686679046Rat
9590306Scort18Serum corticosterone level QTL 182.880.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)64167904686679046Rat
9590140Scort4Serum corticosterone level QTL 414.490.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)64167904686679046Rat
634330Pia16Pristane induced arthritis QTL 163.9joint integrity trait (VT:0010548)arthritic paw count (CMO:0001460)648432758108268790Rat
4889848Pur25Proteinuria QTL 25140.003total urine protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)65980306594001333Rat


Additional Information

Database Acc Id Source(s)
NCBI Gene Niddm47


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2013-03-21 Bw118  Body weight QTL 118  Niddm47  Non-insulin dependent diabetes mellitus QTL 47  Name updated 68913 APPROVED
2013-03-21 Bw118  Body weight QTL 118  Niddm47  Non-insulin dependent diabetes mellitus QTL 47  Symbol updated 68687 APPROVED

RGD Curation Notes
Note Type Note Reference
qtl_cross_type intercross  
qtl_general linked to reduced fat weight 619678
qtl_statistics_details QTL is also significant for adiposity index (LOD = 3.54) 619678