Bw118 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Bw118 (Body weight QTL 118) Rattus norvegicus

Symbol: Bw118
Name: Body weight QTL 118
RGD ID: 634318
Previously known as: Dmo6p; Niddm47; Non-insulin dependent diabetes mellitus QTL 47
Trait: abdominal fat pad mass   (VT:1000711)    
Measurement Type: abdominal fat pad weight   (CMO:0000088)    
LOD Score: 3.55
P Value: Not Available
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2633,309,549 - 57,730,294RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0636,260,288 - 60,606,186RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0646,021,394 - 70,193,933RGDRnor5.0
RGSC_v3.4634,039,461 - 59,946,628RGDRGSC3.4
RGSC_v3.1634,042,414 - 59,949,755RGD
Cross Type: intercross
Strains Crossed: BN OLETF 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View
obesity  (IAGP)

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain
BN  (IEA)
OLETF  (IEA)

References

References - curated
# Reference Title Reference Citation
1. Genetic dissection of "OLETF," a rat model for non-insulin-dependent diabetes mellitus: quantitative trait locus analysis of (OLETF x BN) x OLETF. Watanabe TK, etal., Genomics 1999 Jun 15;58(3):233-9.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
41370558LOC120103512uncharacterized LOC12010351263325562533325526Rat
41281285LOC120103513uncharacterized LOC12010351363344774633451185Rat
6494941Parl-ps7presenilin associated, rhomboid-like, pseudogene 763377856133782700Rat
621527Kcns3potassium voltage-gated channel, modifier subfamily S, member 363380831433865018Rat
1587516Msgn1mesogenin 163391278733913427Rat
1559792Gen1GEN1 Holliday junction 5' flap endonuclease63394759933978461Rat
7591084LOC102547959uncharacterized LOC10254795963395953233962509Rat
1311214Smc6structural maintenance of chromosomes 663397873034033201Rat
3966Vsnl1visinin-like 163403864134159479Rat
1583700Mrps10-ps1mitochondrial ribosomal protein S10, pseudogene 163417823034178737Rat
2322652Rad51ap2RAD51 associated protein 263418217734189129Rat
1586345Hspa8-ps25heat shock protein family A (Hsp70) member 8, pseudogene 2563462402634626138Rat
41331744LOC120093456small nucleolar RNA SNORA1763476947034769595Rat
1586329Hat1-ps1histone acetyltransferase 1, pseudogene 163484247134843593Rat
1586335Rpl27l8ribosomal protein L27 like 863486773334868179Rat
1305961CyriaCYFIP related Rac1 interactor A63504520835150669Rat
2322296Cox7cl1cytochrome c oxidase subunit 7C like 163532699535327273Rat
1565679Rpl27a-ps14ribosomal protein L27a, pseudogene 1463550127535501755Rat
11364133Trnav-uac3transfer RNA valine (anticodon UAC) 363558021135580283Rat
41335282LOC120093419small nucleolar RNA SNORA1563559727935597405Rat
1584995MycnMYCN proto-oncogene, bHLH transcription factor63571776435723590Rat
9410455Rps16-ps1ribosomal protein S16, pseudogene 163573100135731699Rat
619903Ddx1DEAD-box helicase 163599646936027340Rat
1585140NbasNBAS subunit of NRZ tethering complex63604835736353206Rat
11488723LOC108351202ferritin light chain 1 pseudogene63614641136147701Rat
41070163LOC120103514uncharacterized LOC12010351463621250936215589Rat
41388044LOC120103515uncharacterized LOC12010351563638231536391016Rat
1585125Morf4l1-ps9mortality factor 4 like 1, pseudogene 963658836636589355Rat
11498460LOC108351358uncharacterized LOC10835135863666987836810264Rat
1305779Lratd1LRAT domain containing 163691696936922143Rat
2319366Fbxw2-ps2F-box and WD repeat domain containing 2, pseudogene 263721253737214363Rat
7715436LOC102555226uncharacterized LOC10255522663741567537435927Rat
11498435LOC108351205uncharacterized LOC10835120563750642637610011Rat
41258020LOC120103517uncharacterized LOC12010351763761035837694325Rat
11377656LOC108351206uncharacterized LOC10835120663764487437720487Rat
1584006Eif3b-ps1eukaryotic translation initiation factor 3, subunit B, pseudogene 163785599437858259Rat
41075541Trnaa-ggc4transfer RNA alanine (anticodon GGC) 463795137037951450Rat
1583858Tdg-ps2thymine-DNA glycosylase, pseudogene 263805055838051737Rat
7515781LOC102556604uncharacterized LOC10255660463823057338279335Rat
7557098LOC102555705uncharacterized LOC10255570563832785338348255Rat
41343564LOC120103518uncharacterized LOC12010351863851558538519218Rat
1564451Trib2tribbles pseudokinase 263854597138570349Rat
7657676LOC102555864uncharacterized LOC10255586463872202838728847Rat
7500641LOC102555927uncharacterized LOC10255592763877891638822800Rat
2321713Rpl11-ps2ribosomal protein L11, pseudogene 263892067338921200Rat
40932412LOC120093236uncharacterized LOC12009323663918573239186930Rat
7501955LOC102550954uncharacterized LOC10255095463925363339290633Rat
1307646Lpin1lipin 163930919839417034Rat
70962Ntsr2neurotensin receptor 263942429739431015Rat
1564091Greb1growth regulating estrogen receptor binding 163944052239562364Rat
631412E2f6E2F transcription factor 663959222439608685Rat
3590Rock2Rho-associated coiled-coil containing protein kinase 263967911639774033Rat
1306818Slc66a3solute carrier family 66 member 363977480139786554Rat
1582838C6h2orf50similar to human chromosome 2 open reading frame 5063979241639797072Rat
631414Kcnf1potassium voltage-gated channel modifier subfamily F member 163996230139964979Rat
628688Pdia6protein disulfide isomerase family A, member 664006298040080223Rat
1359430Atp6v1c2ATPase H+ transporting V1 subunit C264008054540144199Rat
1359447Nol10nucleolar protein 1064014421740225353Rat
1561890Cfdp1l1craniofacial development protein 1 like 164025471740255884Rat
1597342Psme3-ps2proteasome activator subunit 3, pseudogene 264027018740271205Rat
3227Odc1ornithine decarboxylase 164032983140336444Rat
41218949Snora80bsmall nucleolar RNA, H/ACA box 80B64033114340331276Rat
41299246Trnav-aac13transfer RNA valine (anticodon AAC) 1364041593840416018Rat
41314300Ptma-ps3prothymosin alpha, pseudogene 364042091940423313Rat
40979901LOC12009323860S ribosomal protein L35-like64042359440425165Rat
708375Hpcal1hippocalcin-like 164047820640584721Rat
1305263Asap2ArfGAP with SH3 domain, ankyrin repeat and PH domain 264065820140821017Rat
41082662LOC120093281U6 spliceosomal RNA64072761140727717Rat
1307810Itgb1bp1integrin subunit beta 1 binding protein 164082069340836074Rat
1305767Cpsf3cleavage and polyadenylation specific factor 364083612140864129Rat
41210651LOC120093425small nucleolar RNA SNORA2164083772240837850Rat
727866Iah1isoamyl acetate hydrolyzing esterase 164086553040872747Rat
620404Adam17ADAM metallopeptidase domain 1764087293640920700Rat
41040147LOC120093315U6 spliceosomal RNA64090153440901635Rat
41197514LOC1200932755S ribosomal RNA64092292240923040Rat
3979Ywhaqtyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta64093571440966240Rat
1596058Taf1bTATA-box binding protein associated factor, RNA polymerase I subunit B64111698041194593Rat
7731406Rbm34-ps1RNA binding motif protein 34, pseudogene 164115112341153682Rat
1305735Grhl1grainyhead-like transcription factor 164120732541257516Rat
1306646Klf11KLF transcription factor 1164128569941297548Rat
1596023Cys1cystin 164130083641318071Rat
1598310Rrm2ribonucleotide reductase regulatory subunit M264133985841346774Rat
41153839LOC120093240uncharacterized LOC12009324064137743241380036Rat
1305798Mboat2membrane bound O-acyltransferase domain containing 264147113541597599Rat
619949Kidins220kinase D-interacting substrate 22064161820741706990Rat
41007282LOC120093241ubiquinol-cytochrome-c reductase complex assembly factor 3-like64172531141725677Rat
2859Id2inhibitor of DNA binding 264174055641742393Rat
7526561LOC102553989uncharacterized LOC10255398964182949241855070Rat
9103871LOC103692605uncharacterized LOC10369260564190566341914487Rat
9329158Ndufa5-ps2NADH:ubiquinone oxidoreductase subunit A5, pseudogene 264193110841931448Rat
7629645LOC102554202uncharacterized LOC10255420264194571541969352Rat
7536096LOC102557053uncharacterized LOC10255705364204746342118475Rat
41346264LOC120093242uncharacterized LOC12009324264226566942283040Rat
41088761LOC120093243uncharacterized LOC12009324364240591042411124Rat
1583774Phgdh-ps6phosphoglycerate dehydrogenase, pseudogene 664273609142737499Rat
1561737Rnf144aring finger protein 144A64289976743019769Rat
620495Rsad2radical S-adenosyl methionine domain containing 264304651443059737Rat
1305881Cmpk2cytidine/uridine monophosphate kinase 264307370643085183Rat
11370295LOC108351213uncharacterized LOC10835121364322425643252067Rat
6501114Pgam1-ps2phosphoglycerate mutase 1, pseudogene 264346571843466451Rat
11384778LOC108351214uncharacterized LOC10835121464368784743709249Rat
2318102Silc1sciatic injury induced lincRNA upregulator of SOX1164380570943825284Rat
69351Sox11SRY-box transcription factor 1164400833344010354Rat
2324519Ube2e1-ps1ubiquitin-conjugating enzyme E2E 1, pseudogene 164412500944125650Rat
41387415LOC120093459small nucleolar RNA SNORA1764430255644302686Rat
9422695LOC103692606uncharacterized LOC10369260664449376444498160Rat
11407553LOC108351362uncharacterized LOC10835136264456576444570039Rat
41264357LOC120093466small nucleolar RNA SNORA1764468879444688925Rat
41262445LOC120093439small nucleolar RNA SNORA1764494854344948677Rat
41119779LOC120093290U6 spliceosomal RNA64499053644990642Rat
2322612Npm1-ps19nucleophosmin 1, pseudogene 1964507348145074670Rat
1564913Akr1b1-ps1aldo-keto reductase family 1, member B1 (aldose reductase), pseudogene 164508971745090928Rat
1559651Dcdc2cdoublecortin domain containing 2C64510383845179040Rat
621804Allcallantoicase64517918145214275Rat
41178284LOC120093293U6 spliceosomal RNA64520744745207550Rat
1309678Colec11collectin sub-family member 1164522397445256640Rat
61907Rps7ribosomal protein S764526620045271064Rat
1309012Rnaseh1ribonuclease H164528284945292258Rat
727828Adi1acireductone dioxygenase 164530688545313847Rat
1566054Trappc12trafficking protein particle complex subunit 1264532149645386967Rat
1305817Eipr1EARP complex and GARP complex interacting protein 164538845145502089Rat
7747059LOC102555103uncharacterized LOC10255510364580665345830237Rat
7502861LOC102555048uncharacterized LOC10255504864583490845923094Rat
7690279LOC102554981uncharacterized LOC10255498164609135246111068Rat
620550Myt1lmyelin transcription factor 1-like64616474246564234Rat
1560694Pxdnperoxidasin64658074946658345Rat
3900Tpothyroid peroxidase64669840246768199Rat
1311276Sntg2syntrophin, gamma 264680189347003390Rat
1596936Prdx1-ps5peroxiredoxin 1, pseudogene 564706871847072828Rat
41273085LOC120103519uncharacterized LOC12010351964718482147207414Rat
1359389Tmem18transmembrane protein 1864720684547214294Rat
1587117Alkal2ALK and LTK ligand 264749564547505235Rat
2020Acp1acid phosphatase 164750638047522021Rat
1306440Sh3yl1SH3 and SYLF domain containing 164752209847565858Rat
1585983Hirip3-ps1HIRA interacting protein 3, pseudogene 164757559047578182Rat
40977559LOC120093438small nucleolar RNA SNORA1764762512447625256Rat
1564713Fam110cfamily with sequence similarity 110, member C64763846647644723Rat
41147221Lamb2-ps1laminin subunit beta 2, pseudogene 164769733747811453Rat
9288946LOC103692609serine palmitoyltransferase small subunit A pseudogene64781087547812735Rat
1306311Lamb1laminin subunit beta 164783549247902585Rat
735073Dlddihydrolipoamide dehydrogenase64790415347924814Rat
620623Slc26a3solute carrier family 26 member 364802389248064829Rat
1310703Cbll1Cbl proto-oncogene like 164807119048086174Rat
7499548LOC102555378uncharacterized LOC10255537864808541548115642Rat
3293Slc26a4solute carrier family 26 member 464810757548153762Rat
11492151LOC108351220uncharacterized LOC10835122064816873748174227Rat
1359431Bcap29B-cell receptor-associated protein 2964818270248222698Rat
1311445Dus4ldihydrouridine synthase 4-like64822811148242553Rat
1563296Cog5component of oligomeric golgi complex 564824247048545185Rat
1310848Gpr22G protein-coupled receptor 2264830961948317864Rat
620444Hbp1HMG-box transcription factor 164852963348555775Rat
3394Prkar2bprotein kinase cAMP-dependent type II regulatory subunit beta64856365948653933Rat
41021534LOC120093368U1 spliceosomal RNA64866660248666749Rat
1306468Pik3cgphosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit gamma64876677848802098Rat
41158901LOC120103521uncharacterized LOC12010352164878218648787040Rat
2320310Calm2-ps3calmodulin 2, pseudogene 364887518648877852Rat
41344174LOC120093495U4 spliceosomal RNA64895729148957480Rat
1560812Ccdc71lcoiled-coil domain containing 71-like64896002048964112Rat
2321896Nxt2-ps1nuclear transport factor 2-like export factor 2, pseudogene 164901409149014679Rat
1598099Car13-ps2carbonic anhydrase 13, pseudogene 264939618149396963Rat
40944820LOC120093433small nucleolar RNA SNORA4864941353149413674Rat
631365Namptnicotinamide phosphoribosyltransferase64942531649462109Rat
41143542Metrnl-ps1meteorin-like, glial cell differentiation regulator, pseudogene 164954253649543619Rat
41201218Ccdc69-ps1coiled-coil domain containing 69, pseudogene 164954363749544171Rat
41060377Hexim2-ps1HEXIM P-TEFb complex subunit 2, pseudogene 164954466449545948Rat
7542438LOC102547473uncharacterized LOC10254747364955278549565067Rat
1359569Sypl1synaptophysin-like 164956511149585205Rat
41266620LOC120093480U6atac minor spliceosomal RNA64960520949605327Rat
1591286Cdhr3cadherin-related family member 364964183349702016Rat
7719070LOC102547703uncharacterized LOC10254770364972940349759830Rat
1305730Atxn7l1ataxin 7-like 164975987649982323Rat
7563724LOC102549100uncharacterized LOC10254910064990353049911102Rat
1307943Efcab10EF-hand calcium binding domain 1065000447950011398Rat
11378331LOC108351223uncharacterized LOC10835122365001440650029376Rat
1307824Polr1fRNA polymerase I subunit F65005328950070514Rat
41186807LOC120093447small nucleolar RNA SNORA1765009137850091506Rat
1595482Tomm70-ps1translocase of outer mitochondrial membrane 70, pseudogene 165012491150127154Rat
6486238Rpsa-ps12ribosomal protein SA, pseudogene 1265014805050149675Rat
41134593LOC120093452small nucleolar RNA SNORA1765017897850179105Rat
1595449Rps20-ps6ribosomal protein S20, pseudogene 665063628350636717Rat
1311812Ferd3lFer3-like bHLH transcription factor65064537950646268Rat
41169746Pin4-ps3peptidylprolyl cis/trans isomerase, NIMA-interacting 4, pseudogene 365064794850648344Rat
621455Twist1twist family bHLH transcription factor 165067491050676904Rat
41104462LOC120093244uncharacterized LOC12009324465074508650754911Rat
1594139Dppa4-ps4developmental pluripotency-associated 4, pseudogene 465074524350745986Rat
1310748Hdac9histone deacetylase 965076207451624311Rat
40966473LOC120093437small nucleolar RNA SNORA1765161246051612591Rat
1306328Prps1l1phosphoribosyl pyrophosphate synthetase 1-like 165168496051686650Rat
1309778Snx13sorting nexin 1365175825851862260Rat
1592964Hsp90b1-ps2heat shock protein 90 beta family member 1, pseudogene 265201194452016665Rat
2074Ahraryl hydrocarbon receptor65223408952271568Rat
7734313LOC102554773uncharacterized LOC10255477365227207752308265Rat
1598279Gapdh-ps5Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 565235656352357905Rat
1565406Agr3anterior gradient 3, protein disulphide isomerase family member65264339152666638Rat
1304606Agr2anterior gradient 2, protein disulphide isomerase family member65270860252729378Rat
1311788Tspan13tetraspanin 1365273874852765503Rat
621507Bzw2basic leucine zipper and W2 domains 265282806952888599Rat
1306017Ankmy2ankyrin repeat and MYND domain containing 265288895952930343Rat
7502513Nono-ps3non-POU domain containing, octamer-binding, pseudogene 365290116152904787Rat
1560395Lrrc72leucine rich repeat containing 7265293538752995552Rat
41110432Max-ps2MYC associated factor X, pseudogene 265294876252950726Rat
11382383Rps26-ps5ribosomal protein S26, pseudogene 565298065552996561Rat
628877Sostdc1sclerostin domain containing 165305133653055510Rat
41059523LOC120093435small nucleolar RNA SNORA4865307013453070273Rat
40986010LOC120093463small nucleolar RNA SNORA1765311671453116830Rat
1359368CrppaCDP-L-ribitol pyrophosphorylase A65312026453397030Rat
9299213Chchd2l2-ps4coiled-coil-helix-coiled-coil-helix domain containing protein 2-like 2, pseudogene 465330935553311115Rat
40964578Hnrnpa1-ps2heterogeneous nuclear ribonucleoprotein A1, pseudogene 265369794153700119Rat
41195695LOC120093493small nucleolar RNA U365380824353808325Rat
3079Meox2mesenchyme homeobox 265385676053917467Rat
2319740Exosc-ps1exosome component 4, pseudogene 165395086753951745Rat
1312038Agmoalkylglycerol monooxygenase65398623654317838Rat
41165480LOC120093298U6 spliceosomal RNA65422698154227085Rat
11398630LOC108351227uncharacterized LOC10835122765434308154383179Rat
11518989LOC108351363uncharacterized LOC10835136365438326654384851Rat
1563613Rps25l2ribosomal protein S25 like 265452133554521746Rat
2488Dgkbdiacylglycerol kinase, beta65464094855397210Rat
7669283Actg1-ps1actin, gamma 1, pseudogene 165472120154722310Rat
9263034LOC103692620thyroid hormone receptor-associated protein 3 pseudogene65483121154835676Rat
2323883Pebp1-ps2phosphatidylethanolamine binding protein 1, pseudogene 265554026455540821Rat
1312007Etv1ETS variant transcription factor 165559014955681784Rat
41312804Rplp0-ps9ribosomal protein lateral stalk subunit P0, pseudogene 965568605455686977Rat
41157524LOC120103524uncharacterized LOC12010352465595678756049486Rat
41034983LOC120093442small nucleolar RNA SNORA1765639963256399763Rat
2323695St13-ps2ST13, Hsp70 interacting protein, pseudogene 265643522256436810Rat
1305611Smarce1-ps10SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, pseudogene 1065650441056505749Rat
41392365LOC120093451small nucleolar RNA SNORA1765658492756585050Rat
41025079LOC120093443U2 spliceosomal RNA65660011356600288Rat
41263556LOC120093490U2 spliceosomal RNA65662950456629658Rat
1560073Rps10-ps21ribosomal protein S10, pseudogene 2165666905856669628Rat
40972876LOC12009324760S ribosomal protein L29-like65688837256888994Rat
1588211Phb2-ps3prohibitin 2, pseudogene 365698154956986759Rat
2152Arl4aADP-ribosylation factor like GTPase 4A65707949657084156Rat
735034Scinscinderin65710950057188123Rat
1587073Lsmem1leucine-rich single-pass membrane protein 165725172057261590Rat
2867Ifrd1interferon-related developmental regulator 165726939557317833Rat
1583856Zfp277zinc finger protein 27765738345457512785Rat
41008057LOC120093202uncharacterized LOC12009320265750914557509600Rat
1561724Dock4dedicator of cytokinesis 465751292957902597Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
11141D6Arb1230364865776548658068Ratregion
33828D6Mit918663330939133309549Ratregion
33977D6Mit424065773029457730540Ratregion
34072D6Mgh717764579008845790265Ratregion
11488D6Arb721763403955034039769Ratregion
37222D6Rat8221964298481642985033Ratregion
37392D6Rat9323064343264943432879Ratregion
35235D6Rat2913063813689338137023Ratregion
35338D6Rat3116264234207842342232Ratregion
35390D6Rat3614063509870935098849Ratregion
35396D6Rat3517063443413734434305Ratregion
35531D6Rat3814963403951834039669Ratregion
37046D6Rat5212163541471835414835Ratregion
37662D6Rat9224563967147639671747Ratregion
37746D6Rat9619963855205338552278Ratregion
36534D6Rat3217264164972641649891Ratregion
36560D6Rat3415063971455039714722Ratregion
36586D6Rat2614065464100154641141Ratregion
36787D6Rat3716763569161835691785Ratregion
35943D6Rat3013264737056447370696Ratregion
39848D6Rat14315863686871236868865Ratregion
39924D6Rat14120163875148238751689Ratregion
39972D6Rat13222165081844550818672Ratregion
38080D6Rat9513165289524052895390Ratregion
38220D6Rat6721364255907842559313Ratregion
38758D6Rat8313664025737440257518Ratregion
40240D6Rat13313764887386348873992Ratregion
38930D6Rat6124564257507842575327Ratregion
39022D6Rat6022565197672351976936Ratregion
39232D6Rat9914065652904456529174Ratregion
39450D6Rat13824964054393340544194Ratregion
42202D6Arb516063411286734113027Ratregion
42779D6Rat22824563512897435129218Ratregion
42781D6Rat20720964156247541562698Ratregion
42782D6Rat20620564747401347474227Ratregion
42783D6Rat20514965391391853914055Ratregion
42785D6Rat16816965617434056174415Ratregion
41244D6Rat13515164780750247807653Ratregion
40770D6Rat13923163963395539634300Ratregion
40770D6Rat13923163963405339634300Ratregion
41064D6Rat13419964770999047710185Ratregion
41606D6Rat14416763521491435215081Ratregion
41606D6Rat14416763521491435215248Ratregion
41608D6Rat14227364191223241912500Ratregion
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5086783BM38673118464125125141251435Ratregion
5085932BM38374917364125223941252412Ratregion
5503595UniSTS:46469211665305446053054576Ratregion
5502943Tomm70a90765012542850126335Ratregion
5503847Sostdc119865305429353054491Ratregion
5504776PMC99801P125564033232740332582Ratregion
5504901ha3186140665131026251311668Ratregion
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5505448Id212364174494041745063Ratregion
5504965Tpo148464673948946740973Ratregion
5505169Trib228163854610638546387Ratregion
5505674UniSTS:488924163465168497151686605Ratregion
5506086Myt1l064656094346561525Ratregion
5500105UniSTS:23680523863380986533810103Ratregion
5499627MARC_4117-4118:991938388:111164854418148544292Ratregion
5499671MARC_7327-7328:992008337:162265559120955591831Ratregion
5500113UniSTS:23682813764789941447899551Ratregion
5502573RH12541010964007523040076005Ratregion
5500442fc63b12.x1064067795040678279Ratregion
5500442fc63b12.x1064067797040678279Ratregion
5500689RH8004618863403893334039121Ratregion
5503380S0226065534932255349902Ratregion
5503778UniSTS:47067645764707231447072784Ratregion
5501580RH6999213164854419848544329Ratregion
5501786MARC_12189-12190:1004712897:113263484325334843385Ratregion
5505540D2S171152764769210747693634Ratregion
5501820MARC_13945-13946:1007583817:174764975993649760683Ratregion
Position Markers

Flank 1: (D6Mit4)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2657,730,294 - 57,730,540 (+)MAPPER
Rnor_6.0660,606,186 - 60,606,431NCBI
Rnor_5.0670,193,933 - 70,194,178UniSTS
RGSC_v3.4659,946,628 - 59,946,874RGD
RGSC_v3.4659,946,629 - 59,946,874UniSTS
RGSC_v3.1659,949,755 - 59,950,000RGD
RH 3.4 Map6406.6UniSTS
RH 3.4 Map6406.6RGD
RH 2.0 Map6589.2RGD
Cytogenetic Map6q21UniSTS
Flank 2: (D6Mit9)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2633,309,391 - 33,309,549 (+)MAPPER
Rnor_6.0636,260,131 - 36,260,288NCBI
Rnor_5.0646,021,237 - 46,021,394UniSTS
RGSC_v3.4634,039,303 - 34,039,461RGD
RGSC_v3.4634,039,304 - 34,039,461UniSTS
RGSC_v3.1634,042,257 - 34,042,414RGD
Celera632,744,086 - 32,744,243UniSTS
RH 3.4 Map6123.2UniSTS
RH 3.4 Map6123.2RGD
RH 2.0 Map6277.3RGD
SHRSP x BN Map628.5599RGD
Cytogenetic Map6 RGD


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
8552962Pigfal16Plasma insulin-like growth factor 1 level QTL 169.4blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)6141223769Rat
9590290Uminl2Urine mineral level QTL 23.960.001urine mineral amount (VT:0015086)urine electrolyte level (CMO:0000593)63878398983783989Rat
634318Bw118Body weight QTL 1183.55abdominal fat pad mass (VT:1000711)abdominal fat pad weight (CMO:0000088)63330954957730294Rat
10401812Kidm54Kidney mass QTL 54kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)61436878859368788Rat
634307Bp141Blood pressure QTL 1414arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)63523041780230417Rat
1331743Uae28Urinary albumin excretion QTL 284.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)6134235784Rat
2292589Emca10Estrogen-induced mammary cancer QTL 100.048mammary gland integrity trait (VT:0010552)post-insult time to mammary tumor formation (CMO:0000345)61653614061536140Rat
634330Pia16Pristane induced arthritis QTL 163.9joint integrity trait (VT:0010548)arthritic paw count (CMO:0001460)645790088104200226Rat
10401800Kidm49Kidney mass QTL 49kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)61436878859368788Rat
1300164Rf15Renal function QTL 153.12renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)6507449754641141Rat
1331779Rf38Renal function QTL 382.876kidney blood vessel physiology trait (VT:0100012)absolute change in renal vascular resistance (CMO:0001900)63207442872227641Rat
9589129Insul24Insulin level QTL 2419.060.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)6141223769Rat
1354632Scl29Serum cholesterol level QTL 293.74blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)63509870971636405Rat
1578758Tcas9Tongue tumor susceptibility QTL 93.29tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)6137618905Rat
4145119Mcs25Mammary carcinoma susceptibility QTL 250.0001mammary gland integrity trait (VT:0010552)ratio of deaths to total study population during a period of time (CMO:0001023)610894415110548006Rat
7411603Foco13Food consumption QTL 135.50.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)6141223769Rat
1598843Cm63Cardiac mass QTL 632.6heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)6139036266Rat
738024Sach5Saccharine consumption QTL 53.90.00039consumption behavior trait (VT:0002069)saccharin intake volume to total fluid intake volume ratio (CMO:0001601)6143394190Rat
7411542Bw127Body weight QTL 1275.50.001body mass (VT:0001259)body weight gain (CMO:0000420)6141223769Rat
9589048Scfw3Subcutaneous fat weight QTL 34.570.001subcutaneous adipose mass (VT:1000472)abdominal subcutaneous fat pad weight (CMO:0002069)6141223769Rat
2293839Kiddil2Kidney dilation QTL 24.8kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)62086642281133036Rat
1576309Emca7Estrogen-induced mammary cancer QTL 74mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)615107216107351382Rat
9590140Scort4Serum corticosterone level QTL 414.490.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)63878398983783989Rat
2293709Bss23Bone structure and strength QTL 235.180.0001femur morphology trait (VT:0000559)femur cross-sectional area (CMO:0001661)6142487980Rat
2293650Bss31Bone structure and strength QTL 315.050.0001femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)6142487980Rat
9590306Scort18Serum corticosterone level QTL 182.880.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)63878398983783989Rat
7411584Foco4Food consumption QTL 44.30.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)6142838846Rat
1578665Bss16Bone structure and strength QTL 164.4femur morphology trait (VT:0000559)bone trabecular cross-sectional area (CMO:0002311)61173566972593685Rat
2293841Kiddil4Kidney dilation QTL 44.4kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)62086642281133036Rat
4889848Pur25Proteinuria QTL 25140.003urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)65672856290198260Rat
1300128Rf16Renal function QTL 163.89renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)6507449734434305Rat
1641898Colcr4Colorectal carcinoma resistance QTL43.710.0007intestine integrity trait (VT:0010554)well differentiated malignant colorectal tumor surface area measurement (CMO:0002077)62033877762613667Rat
1578668Bmd14Bone mineral density QTL 143.8femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)61173566972593685Rat
6893340Cm77Cardiac mass QTL 770.260.57heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)63330954981132889Rat
70199Coreg1Compensatory renal growth QTL 111.8kidney mass (VT:0002707)compensatory renal growth score (CMO:0001894)63569161857730540Rat
2301972Bp325Blood pressure QTL 3254.8arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)6172227641Rat
2293656Bss28Bone structure and strength QTL 286.790.0001femur morphology trait (VT:0000559)femur midshaft cortical cross-sectional area (CMO:0001663)6142487980Rat
1354664Slep2Serum leptin concentration QTL 24.49blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)61653614071636405Rat
1300143Rf14Renal function QTL 142.92renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)63443413777102317Rat


Additional Information

Database Acc Id Source(s)
NCBI Gene Niddm47


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2013-03-21 Bw118  Body weight QTL 118  Niddm47  Non-insulin dependent diabetes mellitus QTL 47  Name updated 68913 APPROVED
2013-03-21 Bw118  Body weight QTL 118  Niddm47  Non-insulin dependent diabetes mellitus QTL 47  Symbol updated 68687 APPROVED

RGD Curation Notes
Note Type Note Reference
qtl_cross_type intercross  
qtl_general linked to reduced fat weight 619678
qtl_statistics_details QTL is also significant for adiposity index (LOD = 3.54) 619678