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Gene: Ankmy2 (ankyrin repeat and MYND domain containing 2) Rattus norvegicus

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Symbol:

Ankmy2

Name:

ankyrin repeat and MYND domain containing 2

RGD ID:

1306017

Description:

Predicted to enable enzyme binding activity. Predicted to be located in cilium. Orthologous to human ANKMY2 (ankyrin repeat and MYND domain containing 2); INTERACTS WITH 2,2',4,4'-Tetrabromodiphenyl ether; 3-chloropropane-1,2-diol; 6-propyl-2-thiouracil.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

ankyrin repeat and MYND domain-containing protein 2; Gna14; guanine nucleotide binding protein, alpha 14; LOC314046

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	6	58,616,251 - 58,657,634 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	6	58,615,243 - 58,657,685 (+)	Ensembl				GRCr8
mRatBN7.2	6	52,888,959 - 52,930,343 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	6	52,888,963 - 52,930,394 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	6	53,181,587 - 53,222,988 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	6	53,496,448 - 53,537,853 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	6	52,960,187 - 53,001,581 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	6	55,646,905 - 55,689,223 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	6	55,648,021 - 55,689,218 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	6	65,261,174 - 65,303,415 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	6	54,881,681 - 54,923,743 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	6	52,031,590 - 52,072,350 (+)	NCBI		Celera
RGSC_v3.1	6	54,883,873 - 54,926,014 (+)	NCBI
Cytogenetic Map	6	q16	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

High Myopia (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(-)-epigallocatechin 3-gallate (ISO)

17beta-estradiol (ISO)

2,2',4,4'-Tetrabromodiphenyl ether (EXP)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

3,4-methylenedioxymethamphetamine (ISO)

3-chloropropane-1,2-diol (EXP)

3-isobutyl-1-methyl-7H-xanthine (ISO)

4,4'-diaminodiphenylmethane (ISO)

5-aza-2'-deoxycytidine (ISO)

6-propyl-2-thiouracil (EXP)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

amitrole (EXP)

antirheumatic drug (ISO)

aristolochic acid A (ISO)

arsane (ISO)

arsenic atom (ISO)

benzo[a]pyrene (ISO)

benzo[a]pyrene diol epoxide I (ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

cadmium dichloride (EXP)

calcitriol (ISO)

CGP 52608 (ISO)

chlorpyrifos (ISO)

cisplatin (ISO)

copper(II) sulfate (ISO)

cyclosporin A (ISO)

dexamethasone (ISO)

Dibutyl phosphate (ISO)

dicrotophos (ISO)

dorsomorphin (ISO)

epoxiconazole (ISO)

flutamide (EXP)

indometacin (ISO)

ivermectin (ISO)

manganese atom (ISO)

manganese(0) (ISO)

manganese(II) chloride (ISO)

niclosamide (ISO)

nitrates (ISO)

oxaliplatin (EXP)

paracetamol (ISO)

phenobarbital (EXP)

potassium chromate (ISO)

quercetin (ISO)

resveratrol (ISO)

SB 431542 (ISO)

sodium arsenite (ISO)

sulfadimethoxine (EXP)

tert-butyl hydroperoxide (ISO)

titanium dioxide (ISO)

topotecan (EXP)

trichostatin A (ISO)

triphenyl phosphate (ISO)

valproic acid (ISO)

vorinostat (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Cellular Component

cilium (IEA)

Molecular Function

enzyme binding (ISO)

metal ion binding (IEA)

protein binding (ISO)

zinc ion binding (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:21124868	PMID:21873635

Genomics

Comparative Map Data

Ankmy2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	6	58,616,251 - 58,657,634 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	6	58,615,243 - 58,657,685 (+)	Ensembl				GRCr8
mRatBN7.2	6	52,888,959 - 52,930,343 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	6	52,888,963 - 52,930,394 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	6	53,181,587 - 53,222,988 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	6	53,496,448 - 53,537,853 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	6	52,960,187 - 53,001,581 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	6	55,646,905 - 55,689,223 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	6	55,648,021 - 55,689,218 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	6	65,261,174 - 65,303,415 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	6	54,881,681 - 54,923,743 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	6	52,031,590 - 52,072,350 (+)	NCBI		Celera
RGSC_v3.1	6	54,883,873 - 54,926,014 (+)	NCBI
Cytogenetic Map	6	q16	NCBI

ANKMY2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	7	16,599,779 - 16,645,754 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	7	16,599,779 - 16,645,831 (-)	Ensembl			hg38	GRCh38
GRCh37	7	16,639,404 - 16,685,379 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	7	16,605,937 - 16,651,923 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	7	16,412,651 - 16,458,638	NCBI
Celera	7	16,619,158 - 16,665,198 (-)	NCBI		Celera
Cytogenetic Map	7	p21.1	NCBI
HuRef	7	16,526,082 - 16,571,911 (-)	NCBI		HuRef
CHM1_1	7	16,639,148 - 16,685,165 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	7	16,729,480 - 16,775,453 (-)	NCBI		T2T-CHM13v2.0
CRA_TCAGchr7v2	7	16,692,527 - 16,738,565 (-)	NCBI

Ankmy2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	12	36,207,123 - 36,247,290 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	12	36,207,113 - 36,247,290 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	12	36,157,124 - 36,197,291 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	12	36,157,114 - 36,197,291 (+)	Ensembl			mm10	GRCm38
MGSCv37	12	36,883,711 - 36,923,878 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	12	36,667,456 - 36,707,557 (+)	NCBI		MGSCv36	mm8
Celera	12	37,611,389 - 37,654,049 (+)	NCBI		Celera
Cytogenetic Map	12	A3	NCBI
cM Map	12	16.54	NCBI

Ankmy2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955410	19,778,736 - 19,813,150 (-)	Ensembl
ChiLan1.0	NW_004955410	19,778,736 - 19,812,731 (-)	NCBI	ChiLan1.0	ChiLan1.0

ANKMY2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	6	21,434,100 - 21,480,642 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	7	69,758,806 - 69,805,376 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	7	17,255,793 - 17,301,997 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	7	16,581,302 - 16,628,359 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	7	16,581,308 - 16,628,359 (-)	Ensembl			panPan2	panpan1.1

ANKMY2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	14	31,117,375 - 31,153,916 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	14	31,118,013 - 31,153,874 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	14	30,638,612 - 30,675,160 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	14	31,037,340 - 31,073,909 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	14	31,037,346 - 31,073,910 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	14	31,139,839 - 31,176,402 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	14	30,852,111 - 30,888,891 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	14	31,164,939 - 31,201,520 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Ankmy2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	75,448,648 - 75,484,619 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936546	3,123,279 - 3,159,793 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936546	3,124,124 - 3,159,701 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ANKMY2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	9	85,848,002 - 85,887,427 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	9	85,850,646 - 85,887,450 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

ANKMY2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	21	41,470,011 - 41,517,172 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	21	41,470,033 - 41,517,608 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666042	62,993,517 - 63,040,700 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Ankmy2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624739	13,580,173 - 13,619,385 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624739	13,580,903 - 13,615,812 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Ankmy2
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	7	49,421,683 - 49,470,458 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Ankmy2
323 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	309
Count of miRNA genes:	187
Interacting mature miRNAs:	224
Transcripts:	ENSRNOT00000064822
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
9590290	Uminl2	Urine mineral level QTL 2	3.96	0.001	urine mineral amount (VT:0015086)	urine electrolyte level (CMO:0000593)	6	44510974	89510974	Rat
634318	Bw118	Body weight QTL 118	3.55		abdominal fat pad mass (VT:1000711)	abdominal fat pad weight (CMO:0000088)	6	39028659	63457441	Rat
4889933	Bss88	Bone structure and strength QTL 88	3.8		tibia size trait (VT:0100001)	tibia total bone volume (CMO:0001724)	6	53684921	98684921	Rat
10401812	Kidm54	Kidney mass QTL 54			kidney mass (VT:0002707)	both kidneys wet weight (CMO:0000085)	6	20097635	65097635	Rat
634307	Bp141	Blood pressure QTL 141	4		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	6	40957564	85957564	Rat
1331743	Uae28	Urinary albumin excretion QTL 28	4.5		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	6	45153786	90153786	Rat
8552910	Pigfal5	Plasma insulin-like growth factor 1 level QTL 5	4.3		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	6	22653889	67653889	Rat
10401800	Kidm49	Kidney mass QTL 49			kidney mass (VT:0002707)	both kidneys wet weight (CMO:0000085)	6	20097635	65097635	Rat
5684992	Bmd83	Bone mineral density QTL 82	4.8		tibia mineral mass (VT:1000283)	bone mineral content (CMO:0001554)	6	53684921	98684921	Rat
1331779	Rf38	Renal function QTL 38	2.876		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal vascular resistance (CMO:0001900)	6	31185002	76185002	Rat
737827	Hcar11	Hepatocarcinoma resistance QTL 11	4.4		liver integrity trait (VT:0010547)	liver tumorous lesion number (CMO:0001068)	6	46050607	116278722	Rat
724513	Uae14	Urinary albumin excretion QTL 14	6.5		urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	6	46047353	91047353	Rat
2293839	Kiddil2	Kidney dilation QTL 2	4.8		kidney pelvis morphology trait (VT:0004194)	hydronephrosis severity score (CMO:0001208)	6	26618314	86868070	Rat
1576309	Emca7	Estrogen-induced mammary cancer QTL 7	4		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	6	20859430	113082285	Rat
9590140	Scort4	Serum corticosterone level QTL 4	14.49	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	6	44510974	89510974	Rat
2301964	Bp323	Blood pressure QTL 323	4.3		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	6	1	86868070	Rat
9590306	Scort18	Serum corticosterone level QTL 18	2.88	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	6	44510974	89510974	Rat
1578665	Bss16	Bone structure and strength QTL 16	4.4		femur morphology trait (VT:0000559)	bone trabecular cross-sectional area (CMO:0002311)	6	33328841	78328841	Rat
2293841	Kiddil4	Kidney dilation QTL 4	4.4		kidney pelvis morphology trait (VT:0004194)	hydronephrosis severity score (CMO:0001208)	6	26618314	86868070	Rat
1641898	Colcr4	Colorectal carcinoma resistance QTL4	3.71	0.0007	intestine integrity trait (VT:0010554)	well differentiated malignant colorectal tumor surface area measurement (CMO:0002077)	6	30937632	75937632	Rat
1578668	Bmd14	Bone mineral density QTL 14	3.8		femur mineral mass (VT:0010011)	total volumetric bone mineral density (CMO:0001728)	6	33328841	78328841	Rat
6893340	Cm77	Cardiac mass QTL 77	0.26	0.57	heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	6	39028659	86867923	Rat
5684963	Bss99	Bone structure and strength QTL 99	3.1		tibia area (VT:1000281)	tibia area measurement (CMO:0001382)	6	53684921	98684921	Rat
70199	Coreg1	Compensatory renal growth QTL 1	11.8		kidney mass (VT:0002707)	compensatory renal growth score (CMO:0001894)	6	14599473	63457687	Rat
2301972	Bp325	Blood pressure QTL 325	4.8		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	6	16089372	61967788	Rat
1354664	Slep2	Serum leptin concentration QTL 2	4.49		blood leptin amount (VT:0005667)	serum leptin level (CMO:0000780)	6	22288257	67288257	Rat
1300143	Rf14	Renal function QTL 14	2.92		renal blood flow trait (VT:2000006)	absolute change in renal blood flow rate (CMO:0001168)	6	40163183	85163183	Rat

Markers in Region

D6Rat95

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	6	52,895,240 - 52,895,390 (+)	MAPPER	mRatBN7.2
Rnor_6.0	6	55,653,923 - 55,654,072	NCBI	Rnor6.0
Rnor_5.0	6	65,268,115 - 65,268,264	UniSTS	Rnor5.0
RGSC_v3.4	6	54,887,958 - 54,888,108	RGD	RGSC3.4
RGSC_v3.4	6	54,887,959 - 54,888,108	UniSTS	RGSC3.4
Celera	6	52,037,868 - 52,038,017	UniSTS
RGSC_v3.1	6	54,891,085 - 54,891,234	RGD
RH 3.4 Map	6	364.59	RGD
RH 3.4 Map	6	364.59	UniSTS
RH 2.0 Map	6	548.1	RGD
SHRSP x BN Map	6	40.9199	RGD
FHH x ACI Map	6	45.9599	RGD
Cytogenetic Map	6	q16	UniSTS

RH130224

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	6	52,916,192 - 52,916,397 (+)	MAPPER	mRatBN7.2
Rnor_6.0	6	55,674,764 - 55,674,968	NCBI	Rnor6.0
Rnor_5.0	6	65,288,956 - 65,289,160	UniSTS	Rnor5.0
RGSC_v3.4	6	54,909,873 - 54,910,077	UniSTS	RGSC3.4
Celera	6	52,058,474 - 52,058,678	UniSTS
RH 3.4 Map	6	364.9	UniSTS
Cytogenetic Map	6	q16	UniSTS

RH130430

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	6	58,656,938 - 58,657,269 (+)	Marker Load Pipeline
mRatBN7.2	6	52,929,647 - 52,929,978 (+)	MAPPER	mRatBN7.2
Rnor_6.0	6	55,688,531 - 55,688,861	NCBI	Rnor6.0
Rnor_5.0	6	65,302,723 - 65,303,053	UniSTS	Rnor5.0
RGSC_v3.4	6	54,923,328 - 54,923,658	UniSTS	RGSC3.4
Celera	6	52,071,935 - 52,072,265	UniSTS
RH 3.4 Map	6	351.8	UniSTS
Cytogenetic Map	6	q16	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	164	91	90	59	92	59	6	356	192	11	143	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001108019	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001399649	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006240042	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017594135	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH473947	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000006	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000064822 ⟹ ENSRNOP00000062801

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	6	58,616,255 - 58,657,354 (+)	Ensembl
mRatBN7.2 Ensembl	6	52,888,963 - 52,930,063 (+)	Ensembl
Rnor_6.0 Ensembl	6	55,648,021 - 55,688,946 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000091488 ⟹ ENSRNOP00000074676

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	6	58,616,248 - 58,657,685 (+)	Ensembl
mRatBN7.2 Ensembl	6	52,888,997 - 52,930,394 (+)	Ensembl
Rnor_6.0 Ensembl	6	55,648,051 - 55,689,218 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000140960 ⟹ ENSRNOP00000108279

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	6	58,615,243 - 58,657,685 (+)	Ensembl

RefSeq Acc Id:

NM_001108019 ⟹ NP_001101489

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	58,616,255 - 58,657,354 (+)	NCBI
mRatBN7.2	6	52,888,963 - 52,930,063 (+)	NCBI
Rnor_6.0	6	55,648,021 - 55,688,946 (+)	NCBI
Rnor_5.0	6	65,261,174 - 65,303,415 (+)	NCBI
RGSC_v3.4	6	54,881,681 - 54,923,743 (+)	RGD
Celera	6	52,031,590 - 52,072,350 (+)	RGD

Sequence:

show sequence

GCCCGGCTCGCTCAAGCTCGCCGCACCCGCCGGCCCCCAGCCGCGAGACCCTGGCGAGTGCCAC
TTCACTGGGCTGCTGCTCCGGCCTCGAGTTTCCTTGCTCCGGTCGTCATCCACGACGCACACAC
GTCTCTGGTGTTTTTTAAAAAACCTTTCCAAAGAAATAGAATAAGCGTCAAGCTGGCGGGAACG
ATGGGTCACATAAAGAAAGGCGAGCTGACCCAGGAGGAAAAGGAACTGTTGGAAGTGATCGGAA
AAGGTACCGTCCGAGAAGCCGGGACACTGTTGTCTAGTAAGAATGTTCATGTCAACTGCTTGGA
TGAGAATGGAATGACTCCTTTAATGCATGCGGCATATAAGGGAAAACTTGAAATGTGCAAATTG
CTTCTGCGACATGGAGCTGATGTCAACTGCCATCAGCATGTGCATGGGTATACGGCCCTCATGT
TTGCCGCACTGTCTGGTAATAAAGACATCACCTGGGCCATGCTGGAGGCGGGAGCAGAGACAGA
CGTTGTGAACTCGGTGGGAAGAACGGCCTCCCAGATGGCAGCCTTTGTGGGTCAGTATGATTGT
GTGGCTATCATCAACAATTTTTTCCCTCGAGAGAGACTGGATTATTACACCAAACCCCAGGGAC
TGGATAAGGAGCCAAAACTCCCTCCAAAGTTGGCAGGCCCACTGCACAAAATCATCACCACGAC
GAATCTCCACCCTGTCAAGATCGTGATGCTTGTGAGTGAGAACCCTCTGCTGGCAGACGCAGCC
GCTCTCGGTAAATGCTACAAGGTGATGGATTTGATCTGTGAGAAATGCATGAAGCAAAGAGACA
TGAATGAAGTGCTGGCTATGAAAATGCACTATATCAGCTGCATCTTTCAGAAATGCATTACCTT
CCTCAAGGAAGGGGAGAATAAGCTGGACGCCCTGATCAAAAGCTTGTTGAAAGGCAGAGCGTCG
GACGGCTTCCCAGTGTATCAGGAAAAGATCATCAGAGAAAGCATCAGGAAGTTTCCCTACTGCG
AAGCTACACTCCTCCAGCAGCTGGTGCGAAGCATCGCTCCAGTTGAAATCGTGATATATTGTGA
CCAGATCTGCCAGAAGACACACTGGTTCGCACATAAGAAGATGTGTAAGAGTCTGAAAGATGTT
TATGAGAAGCAGCAGACCGAAGCTGCCAAACAGAAGAGGCAGGAGGAAGCGAATGCCAATTCTA
ACCATGTTAATGAAGATGAACCAGAGGCTGAAGTGGGTATCTCTCACGAAGATCCCACTCCTGG
CGAGTCTGTGGAAAGGGAGGAGGAAGCCAGCAAGGAGGCTGAACTGGGCAGTGCACAGGATGCT
CCTGCAGGGCCACAGCTGTCCGAGGAGTAGAAGCTGTCGACAGTGGCCAGCCTGGGTGGACTTC
ATCCTGGCAGATGGCTGCAGAACTTCACTGGCCCTGACAGTGCAGGGCACAGTGGCAGGATTGC
ACATCCCTAGAATAGAGGCTTTCAAACAAAGCTGCCTCCCACGCCATGATTTCCTGTTGATTTC
TGTTCTATAATTGAACAGGCATTTCTGCGGATAAAAAAGTTTTTTTTTCAAAATACCCCCAAAC
AAGTCCATTCCTTTGCTGGCTCCCCAGTGATTGTACACAAAGGAAAGTAAATCACCTTAAAGAA
GAAATCTGGGTTCTAGGGAACAAAGAGAACAGGGAGGATGTGAAAGAGAAGTGATGTTTAGGGA
AGAAGGAATCGTGGGCACAGAGATGGGCAGAGAAACAAAACGTACCTGTGAATGTTGTCCTGAA
GTTGTACATACAAAGCTATCATGAGGAATTCTCCGTGCTCCTAAAGCTTTGTCATATACAGTTA
AGCCTGCTGTAGTTTAAATAGGAATTTTCGAGAGCACTTTGAACCCCGCGTTCCTTGCAGCGAT
ACTCTGCATGATTTGAACAATCAGAAAGGTTGGATCCAACCCTGGGTAGTCACTGTACACACTT
CCCGTAGAGCCACCCCTGTACCATACTCTACCCTTCTTACCTACCAACTCTTACCTTCCCATCA
GCTTTTCATGACCCTCCTCCTGCCCAGAAATGGATTTATAGCTGTCATTTCGACAATGTCCCAT
TCTGCGTTTTCAGTGTACGTGGCTTGTAAGCAAAGCGGGAGTGTCGTGTCTGAAGAAGGTGCTG
TCTTTCCGTTTCCTCTGTTGGCTTTAAAATAAATCTACCTACATACACAGTTC

hide sequence

RefSeq Acc Id:

NM_001399649 ⟹ NP_001386578

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	58,616,251 - 58,657,634 (+)	NCBI
mRatBN7.2	6	52,888,959 - 52,930,343 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001101489	(Get FASTA)	NCBI Sequence Viewer
	NP_001386578	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDM03315	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000062801
	ENSRNOP00000062801.1
	ENSRNOP00000074676
	ENSRNOP00000074676.1
	ENSRNOP00000108279.1

RefSeq Acc Id:	NP_001101489 ⟸ NM_001108019
- Peptide Label:	isoform 2
- UniProtKB:	D3ZC34 (UniProtKB/TrEMBL), A6HBB0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGHIKKGELTQEEKELLEVIGKGTVREAGTLLSSKNVHVNCLDENGMTPLMHAAYKGKLEMCKL LLRHGADVNCHQHVHGYTALMFAALSGNKDITWAMLEAGAETDVVNSVGRTASQMAAFVGQYDC VAIINNFFPRERLDYYTKPQGLDKEPKLPPKLAGPLHKIITTTNLHPVKIVMLVSENPLLADAA ALGKCYKVMDLICEKCMKQRDMNEVLAMKMHYISCIFQKCITFLKEGENKLDALIKSLLKGRAS DGFPVYQEKIIRESIRKFPYCEATLLQQLVRSIAPVEIVIYCDQICQKTHWFAHKKMCKSLKDV YEKQQTEAAKQKRQEEANANSNHVNEDEPEAEVGISHEDPTPGESVEREEEASKEAELGSAQDA PAGPQLSEE hide sequence

Ensembl Acc Id:

ENSRNOP00000074676 ⟸ ENSRNOT00000091488

Ensembl Acc Id:

ENSRNOP00000062801 ⟸ ENSRNOT00000064822

RefSeq Acc Id:	NP_001386578 ⟸ NM_001399649
- Peptide Label:	isoform 1
- UniProtKB:	A0A0G2K8N6 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000108279 ⟸ ENSRNOT00000140960

Protein Domains

MYND-type

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-A0A0G2K8N6-F1-model_v2	AlphaFold	A0A0G2K8N6	1-436	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13694561

Promoter ID:

EPDNEW_R5086

Type:

initiation region

Name:

Ankmy2_1

Description:

ankyrin repeat and MYND domain containing 2

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	6	55,648,045 - 55,648,105	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1306017	AgrOrtholog
BioCyc Gene	G2FUF-37799	BioCyc
Ensembl Genes	ENSRNOG00000005623	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000064822	ENTREZGENE
	ENSRNOT00000064822.4	UniProtKB/TrEMBL
	ENSRNOT00000091488	ENTREZGENE
	ENSRNOT00000091488.3	UniProtKB/TrEMBL
	ENSRNOT00000140960.1	UniProtKB/TrEMBL
Gene3D-CATH	1.25.40.20	UniProtKB/TrEMBL
	6.10.140.2220	UniProtKB/TrEMBL
InterPro	Ankyrin-MYND_dom_contain_2	UniProtKB/TrEMBL
	Ankyrin_rpt	UniProtKB/TrEMBL
	Ankyrin_rpt-contain_sf	UniProtKB/TrEMBL
	Znf_MYND	UniProtKB/TrEMBL
NCBI Gene	314046	ENTREZGENE
PANTHER	ANKYRIN REPEAT AND MYND DOMAIN-CONTAINING PROTEIN 2	UniProtKB/TrEMBL
	ANKYRIN REPEAT AND MYND DOMAIN-CONTAINING PROTEIN 2	UniProtKB/TrEMBL
Pfam	Ank_2	UniProtKB/TrEMBL
	zf-MYND	UniProtKB/TrEMBL
PhenoGen	Ankmy2	PhenoGen
PROSITE	ANK_REP_REGION	UniProtKB/TrEMBL
	ANK_REPEAT	UniProtKB/TrEMBL
	ZF_MYND_1	UniProtKB/TrEMBL
	ZF_MYND_2	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000005623	RatGTEx
SMART	ANK	UniProtKB/TrEMBL
Superfamily-SCOP	ANK	UniProtKB/TrEMBL
	HIT/MYND zinc finger-like	UniProtKB/TrEMBL
UniProt	A0A0G2K8N6	ENTREZGENE, UniProtKB/TrEMBL
	A0ABK0LW01_RAT	UniProtKB/TrEMBL
	A6HBB0	ENTREZGENE, UniProtKB/TrEMBL
	D3ZC34	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-04-30	Ankmy2	ankyrin repeat and MYND domain containing 2	Ankmy2_predicted	ankyrin repeat and MYND domain containing 2 (predicted)	'predicted' is removed	2292626	APPROVED
2006-03-30	Ankmy2_predicted	ankyrin repeat and MYND domain containing 2 (predicted)	Gna14_predicted	guanine nucleotide binding protein, alpha 14 (predicted)	Symbol and Name updated	1299863	APPROVED
2005-01-12	Gna14_predicted	guanine nucleotide binding protein, alpha 14 (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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