Foxa1 Marker Search Result - Rat Genome Database

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Marker: Foxa1

Symbol: Foxa1
Previously known as:
RGD ID: 5502871
Expected Size: 922 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2675,131,088 - 75,132,010 (+)MAPPERmRatBN7.2
Rnor_6.0678,544,570 - 78,545,491NCBIRnor6.0
Rnor_5.0688,069,141 - 88,070,062UniSTSRnor5.0
RGSC_v3.4678,004,077 - 78,004,998UniSTSRGSC3.4
Celera673,927,498 - 73,928,419UniSTS
Cytogenetic Map6q23-q24UniSTS
Is Marker For: Genes:   Foxa1  




#
Reference Title
Reference Citation
1. UniSTS Pipeline RGD automated pipelines


 
Forward Primer CCACCACACGAGTTTACAGG
Reverse Primer CCTTAACTGCAAATGATCAGGA
 


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
2807Foxa1forkhead box A167509990775136534Rat


1 to 10 of 28 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
9590290Uminl2Urine mineral level QTL 23.960.001urine mineral amount (VT:0015086)urine electrolyte level (CMO:0000593)63878398983783989Rat
1331799Bp211Blood pressure QTL 2113.66407arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)672202632130919985Rat
634307Bp141Blood pressure QTL 1414arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)63523041780230417Rat
634330Pia16Pristane induced arthritis QTL 163.9joint integrity trait (VT:0010548)arthritic paw count (CMO:0001460)645790088104200226Rat
1331789Rf37Renal function QTL 373.224kidney blood vessel physiology trait (VT:0100012)absolute change in renal vascular resistance (CMO:0001900)672202632115200186Rat
4145119Mcs25Mammary carcinoma susceptibility QTL 250.0001mammary gland integrity trait (VT:0010552)ratio of deaths to total study population during a period of time (CMO:0001023)610894415110548006Rat
70176Mcsm1Mammary carcinoma susceptibility modifier QTL 1mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)658632962103632962Rat
1581563Uae33Urinary albumin excretion QTL 33urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)672227641130729205Rat
1558641Cm47Cardiac mass QTL 472.90.001heart mass (VT:0007028)heart wet weight (CMO:0000069)657730540104085867Rat
724524Uae2Urinary albumin excretion QTL 22.70.0005urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)673463459109394713Rat

1 to 10 of 28 rows


Database
Acc Id
Source(s)
NCBI Gene 25098 UniSTS