Scort4 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Scort4 (Serum corticosterone level QTL 4) Rattus norvegicus

Symbol: Scort4
Name: Serum corticosterone level QTL 4
RGD ID: 9590140
Previously known as: plasma cort at basal level; plasma corticosterone at basal level
Trait: blood corticosterone amount   (VT:0005345)    
Measurement Type: plasma corticosterone level   (CMO:0001173)    
LOD Score: 14.49
P Value: 0.001
Variance: 15.4
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr8644,510,974 - 89,510,974RGD_MAPPER_PIPELINE
mRatBN7.2638,783,989 - 83,783,989RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0641,679,046 - 86,679,046RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0651,267,831 - 96,267,831RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.4641,096,237 - 86,096,237RGD_MAPPER_PIPELINERGSC3.4
Cross Type: intercross
Strains Crossed: F344/IcoCrlf LOU/NimrOlaHsd 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain

References

References - curated
# Reference Title Reference Citation
1. Quantitative Trait Loci Influencing Abdominal Fat Deposition and Functional Variability of the HPA Axis in the Rat. Marissal-Arvy N, etal., Horm Metab Res. 2014 Jul 8.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
7500641LOC102555927uncharacterized LOC10255592764450770444557226Rat
2321713Rpl11-ps2ribosomal protein L11, pseudogene 264464945544649982Rat
40932412LOC120093236uncharacterized LOC12009323664491398144915723Rat
7501955LOC102550954uncharacterized LOC10255095464498241145022358Rat
1307646Lpin1lipin 164503911045145845Rat
70962Ntsr2neurotensin receptor 264515309545159783Rat
1564091Greb1growth regulating estrogen receptor binding 164516928945321973Rat
631412E2f6E2F transcription factor 664532099345337437Rat
3590Rock2Rho-associated coiled-coil containing protein kinase 264540782345502773Rat
1306818Slc66a3solute carrier family 66 member 364550354145515293Rat
1582838Cimip5ciliary microtubule inner protein 564552057545525810Rat
402324477LOC134479346uncharacterized LOC13447934664552574345528469Rat
631414Kcnf1potassium voltage-gated channel modifier subfamily F member 164569102845693706Rat
628688Pdia6protein disulfide isomerase family A, member 664579170445808947Rat
1359430Atp6v1c2ATPase H+ transporting V1 subunit C264580926945872914Rat
1359447Nol10nucleolar protein 1064586177345954067Rat
1561890Cfdp1l1craniofacial development protein 1 like 164598338345984583Rat
1597342Psme3-ps2proteasome activator subunit 3, pseudogene 264599889645999952Rat
3227Odc1ornithine decarboxylase 164605843946065148Rat
41218949Snora80bsmall nucleolar RNA, H/ACA box 80B64605984746059980Rat
402357388LOC134479118uncharacterized LOC13447911864608129546083829Rat
402369251LOC134479347uncharacterized LOC13447934764611296446119768Rat
41299246Trnav-aac13transfer RNA valine (anticodon AAC) 1364614463946144719Rat
41314300Ptma-ps3prothymosin alpha, pseudogene 364614970646152012Rat
40979901LOC12009323860S ribosomal protein L35-like64615234146153099Rat
708375Hpcal1hippocalcin-like 164620680946313364Rat
402032881LOC134479348uncharacterized LOC13447934864632826646330435Rat
402280070LOC134479349uncharacterized LOC13447934964634121346347360Rat
1305263Asap2ArfGAP with SH3 domain, ankyrin repeat and PH domain 264638660546549669Rat
41082662LOC120093281U6 spliceosomal RNA64645627346456379Rat
1307810Itgb1bp1integrin subunit beta 1 binding protein 164654999446564735Rat
1305767Cpsf3cleavage and polyadenylation specific factor 364656485546592776Rat
41210651LOC120093425small nucleolar RNA SNORA2164656637346566501Rat
727866Iah1isoamyl acetate hydrolyzing esterase 164659417746601394Rat
620404Adam17ADAM metallopeptidase domain 1764660158346663690Rat
41040147LOC120093315U6 spliceosomal RNA64663018246630283Rat
41197514LOC1200932755S ribosomal RNA64665156646651684Rat
3979Ywhaqtyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta64666435846694875Rat
402227551LOC134479119uncharacterized LOC13447911964669789846754873Rat
402112058LOC134479120uncharacterized LOC13447912064670633246747191Rat
1596058Taf1bTATA-box binding protein associated factor, RNA polymerase I subunit B64684557146923209Rat
7731406Rbm34-ps1RNA binding motif protein 34, pseudogene 164687970046882298Rat
1305735Grhl1grainyhead-like transcription factor 164693594746986126Rat
1306646Klf11KLF transcription factor 1164701431247026152Rat
1596023Cys1cystin 164702944047046671Rat
1598310Rrm2ribonucleotide reductase regulatory subunit M264704475547075370Rat
41153839LOC120093240uncharacterized LOC12009324064710601547116923Rat
402118393LOC134479350uncharacterized LOC13447935064719008647199671Rat
1305798Mboat2membrane bound O-acyltransferase domain containing 264719975147326215Rat
619949Kidins220kinase D-interacting substrate 22064734679047435599Rat
41007282LOC120093241ubiquinol-cytochrome-c reductase complex assembly factor 3-like64745390847454374Rat
2859Id2inhibitor of DNA binding 264746916247470995Rat
402234965LOC134479282uncharacterized LOC13447928264748570847489898Rat
7526561LOC102553989uncharacterized LOC10255398964756330747583659Rat
9103871LOC103692605uncharacterized LOC10369260564763424447646175Rat
9329158Ndufa5-ps2NADH:ubiquinone oxidoreductase subunit A5, pseudogene 264765968647660026Rat
7629645LOC102554202uncharacterized LOC10255420264767428747697199Rat
402036770LOC134479351uncharacterized LOC13447935164767698447682872Rat
7536096LOC102557053uncharacterized LOC10255705364777539547848006Rat
41346264LOC120093242uncharacterized LOC12009324264799421648012026Rat
41088761LOC120093243uncharacterized LOC12009324364813444148140286Rat
1583774Phgdh-ps6phosphoglycerate dehydrogenase, pseudogene 664846456148465969Rat
1561737Rnf144aring finger protein 144A64862824148748241Rat
402063905LOC134479352uncharacterized LOC13447935264874829548755396Rat
620495Rsad2radical S-adenosyl methionine domain containing 264877498548788245Rat
1305881Cmpk2cytidine/uridine monophosphate kinase 264880215048813652Rat
11370295LOC108351213uncharacterized LOC10835121364894904448982305Rat
6501114Pgam1-ps2phosphoglycerate mutase 1, pseudogene 264919415949194892Rat
11384778LOC108351214uncharacterized LOC10835121464941162849437727Rat
2318102Silc1sciatic injury induced lincRNA upregulator of SOX1164953498049553789Rat
69351Sox11SRY-box transcription factor 1164973677349738794Rat
2324519Ube2e1-ps1ubiquitin-conjugating enzyme E2E 1, pseudogene 164985344749854088Rat
402315986LOC134479283cAMP-dependent protein kinase inhibitor gamma-like64994243349944948Rat
41387415LOC120093459small nucleolar RNA SNORA1765003098150031111Rat
9422695LOC103692606uncharacterized LOC10369260665022216050226572Rat
11407553LOC108351362uncharacterized LOC10835136265029008550296732Rat
41264357LOC120093466small nucleolar RNA SNORA1765041720750417338Rat
41262445LOC120093439small nucleolar RNA SNORA1765067694350677077Rat
41119779LOC120093290U6 spliceosomal RNA65071893450719040Rat
2322612Npm1-ps19nucleophosmin 1, pseudogene 1965080187450803067Rat
1564913Akr1b1-ps1aldo-keto reductase family 1, member B1 (aldose reductase), pseudogene 165081670150819164Rat
1559651Dcdc2cdoublecortin domain containing 2C65083240750907437Rat
621804Allcallantoicase65090757550942665Rat
41178284LOC120093293U6 spliceosomal RNA65093583850935941Rat
1309678Colec11collectin sub-family member 1165095235750984845Rat
61907Rps7ribosomal protein S765099458150999447Rat
402427254LOC134479353uncharacterized LOC13447935365100468851011275Rat
1309012Rnaseh1ribonuclease H165101124451020638Rat
727828Adi1acireductone dioxygenase 165103526751042229Rat
1566054Trappc12trafficking protein particle complex subunit 1265104987851115343Rat
1305817Eipr1EARP complex and GARP complex interacting protein 165111682751230453Rat
7747059LOC102555103uncharacterized LOC10255510365152465651563196Rat
7502861LOC102555048uncharacterized LOC10255504865156325551651059Rat
7690279LOC102554981uncharacterized LOC10255498165181968751839464Rat
402288820LOC134479356uncharacterized LOC13447935665189143851892752Rat
620550Myt1lmyelin transcription factor 1-like65189285852291830Rat
402439676LOC134479355uncharacterized LOC13447935565201294452015729Rat
402357852LOC134479354uncharacterized LOC13447935465205739952213180Rat
1560694Pxdnperoxidasin65230834752385943Rat
3900Tpothyroid peroxidase65242599852495793Rat
1311276Sntg2syntrophin, gamma 265252948152730972Rat
402231027LOC134479357uncharacterized LOC13447935765260161952608883Rat
402330140LOC134479358uncharacterized LOC13447935865276637952773858Rat
1596936Prdx1-ps5peroxiredoxin 1, pseudogene 565279630152800383Rat
41273085LOC120103519uncharacterized LOC12010351965291237452934988Rat
1359389Tmem18transmembrane protein 1865293441952941868Rat
1587117Alkal2ALK and LTK ligand 265322320453232794Rat
2020Acp1acid phosphatase 165323393753249576Rat
402345372LOC134479359uncharacterized LOC13447935965323490953238830Rat
1306440Sh3yl1SH3 and SYLF domain containing 165325003653293406Rat
1585983Hirip3-ps1HIRA interacting protein 3, pseudogene 165330331853305732Rat
40977559LOC120093438small nucleolar RNA SNORA1765335267353352805Rat
1564713Fam110cfamily with sequence similarity 110, member C65336601353372270Rat
41147221Lamb2-ps1laminin subunit beta 2, pseudogene 165342488253538994Rat
9288946LOC103692609serine palmitoyltransferase small subunit A pseudogene65353976653540276Rat
1306311Lamb1laminin subunit beta 165356284953630118Rat
735073Dlddihydrolipoamide dehydrogenase65363168653655059Rat
620623Slc26a3solute carrier family 26 member 365375141553792300Rat
1310703Cbll1Cbl proto-oncogene like 165379871253812890Rat
7499548LOC102555378uncharacterized LOC10255537865381278053843163Rat
3293Slc26a4solute carrier family 26 member 465383510253873968Rat
11492151LOC108351220uncharacterized LOC10835122065389707253901732Rat
1359431Bcap29B-cell receptor-associated protein 2965391020953950206Rat
402207861LOC134479362uncharacterized LOC13447936265395028253952907Rat
1311445Dus4ldihydrouridine synthase 4-like65395560953970050Rat
1563296Cog5component of oligomeric golgi complex 565396996754267869Rat
1310848Gpr22G protein-coupled receptor 2265403799854044994Rat
620444Hbp1HMG-box transcription factor 165425711854283373Rat
402401012LOC134479361large ribosomal subunit protein eL20-like65427040954272759Rat
3394Prkar2bprotein kinase cAMP-dependent type II regulatory subunit beta65429114354381639Rat
41021534LOC120093368U1 spliceosomal RNA65439407754394224Rat
402198615LOC134479360uncharacterized LOC13447936065448222254494742Rat
1306468Pik3cgphosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit gamma65449424754529563Rat
41158901LOC120103521uncharacterized LOC12010352165450857754515965Rat
2320310Calm2-ps3calmodulin 2, pseudogene 365460264754605313Rat
41344174LOC120093495U4 spliceosomal RNA65468480754684934Rat
1560812Ccdc71lcoiled-coil domain containing 71-like65468747454691566Rat
2321896Nxt2-ps1nuclear transport factor 2-like export factor 2, pseudogene 165474160254742124Rat
402388858LOC134479363uncharacterized LOC13447936365502432255032127Rat
1598099Car13-ps2carbonic anhydrase 13, pseudogene 265512362155127694Rat
40944820LOC120093433small nucleolar RNA SNORA4865514097155141114Rat
631365Namptnicotinamide phosphoribosyltransferase65515275655189547Rat
41143542Metrnl-ps1meteorin-like, glial cell differentiation regulator, pseudogene 165526872755271041Rat
41201218Ccdc69-ps1coiled-coil domain containing 69, pseudogene 165527104455271593Rat
41060377Hexim2-ps1HEXIM P-TEFb complex subunit 2, pseudogene 165527208655273556Rat
7542438LOC102547473uncharacterized LOC10254747365528021155292800Rat
1359569Sypl1synaptophysin-like 165529255555311519Rat
41266620LOC120093480U6atac minor spliceosomal RNA65533263055332748Rat
1591286Cdhr3cadherin-related family member 365536921555429454Rat
402112689LOC134479364uncharacterized LOC13447936465543918455442513Rat
7719070LOC102547703uncharacterized LOC10254770365545689455487271Rat
1305730Atxn7l1ataxin 7-like 165548730955709751Rat
7563724LOC102549100uncharacterized LOC10254910065563096155646526Rat
1307943Efcab10EF-hand calcium binding domain 1065573190255738821Rat
11378331LOC108351223uncharacterized LOC10835122365574225555754534Rat
402372419LOC134479122transcription initiation factor TFIID subunit 3-like65575864655766303Rat
1307824Polr1fRNA polymerase I subunit F65578070655797935Rat
41186807LOC120093447small nucleolar RNA SNORA1765581879555818923Rat
1595482Tomm70-ps1translocase of outer mitochondrial membrane 70, pseudogene 165585232855854571Rat
6486238Rpsa-ps12ribosomal protein SA, pseudogene 1265587547355877092Rat
41134593LOC120093452small nucleolar RNA SNORA1765590639555906522Rat
402285214LOC134479365uncharacterized LOC13447936565599612356002114Rat
402269794LOC134479366uncharacterized LOC13447936665611488756125437Rat
1595449Rps20-ps6ribosomal protein S20, pseudogene 665636368856364100Rat
1311812Ferd3lFer3-like bHLH transcription factor65637277856373667Rat
41169746Pin4-ps3peptidylprolyl cis/trans isomerase, NIMA-interacting 4, pseudogene 365637534756375743Rat
621455Twist1twist family bHLH transcription factor 165640230956404303Rat
41104462LOC120093244uncharacterized LOC12009324465647247356482050Rat
1594139Dppa4-ps4developmental pluripotency-associated 4, pseudogene 465647264156473384Rat
1310748Hdac9histone deacetylase 965648947257351654Rat
40966473LOC120093437small nucleolar RNA SNORA1765733983257339963Rat
1306328Prps1l1phosphoribosyl pyrophosphate synthetase 1-like 165741233157414021Rat
1309778Snx13sorting nexin 1365747813957589624Rat
1592964Hsp90b1-ps2heat shock protein 90 beta family member 1, pseudogene 265773928957744008Rat
2074Ahraryl hydrocarbon receptor65796142357998901Rat
7734313LOC102554773uncharacterized LOC10255477365800320058035905Rat
1598279Gapdh-ps5Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 565808408158085215Rat
1565406Agr3anterior gradient 3, protein disulphide isomerase family member65837070158393944Rat
1304606Agr2anterior gradient 2, protein disulphide isomerase family member65843590858456678Rat
1311788Tspan13tetraspanin 1365846605158492804Rat
402124717LOC134479367uncharacterized LOC13447936765849319358497446Rat
621507Bzw2basic leucine zipper and W2 domains 265855536258615921Rat
1306017Ankmy2ankyrin repeat and MYND domain containing 265861625158657634Rat
7502513Nono-ps3non-POU domain containing, octamer-binding, pseudogene 365862845358634195Rat
1560395Lrrc72leucine rich repeat containing 7265866261158722844Rat
41110432Max-ps2MYC associated factor X, pseudogene 265867167558677591Rat
11382383Rps26-ps5ribosomal protein S26, pseudogene 565872304258723848Rat
628877Sostdc1sclerostin domain containing 165877862358782797Rat
41059523LOC120093435small nucleolar RNA SNORA4865879742058797559Rat
40986010LOC120093463small nucleolar RNA SNORA1765884400158844117Rat
1359368CrppaCDP-L-ribitol pyrophosphorylase A65884755059124309Rat
9299213Chchd2l2-ps4coiled-coil-helix-coiled-coil-helix domain containing protein 2-like 2, pseudogene 465902564259038400Rat
40964578Hnrnpa1-ps2heterogeneous nuclear ribonucleoprotein A1, pseudogene 265942575259427266Rat
41195695LOC120093493small nucleolar RNA U365953551059535592Rat
3079Meox2mesenchyme homeobox 265958402559644722Rat
2319740Exosc-ps1exosome component 4, pseudogene 165967811159678989Rat
1312038Agmoalkylglycerol monooxygenase65971349560044851Rat
41165480LOC120093298U6 spliceosomal RNA65995420559954309Rat
11398630LOC108351227uncharacterized LOC10835122766007028860110392Rat
11518989LOC108351363uncharacterized LOC10835136366011046460111945Rat
1563613Rps25l2ribosomal protein S25 like 266024858660249000Rat
2488Dgkbdiacylglycerol kinase, beta66036810161124420Rat
7669283Actg1-ps1actin, gamma 1, pseudogene 166044841460449511Rat
9263034LOC103692620thyroid hormone receptor-associated protein 3 pseudogene66055842660563895Rat
402454282LOC134479368uncharacterized LOC13447936866105061961051720Rat
2323883Pebp1-ps2phosphatidylethanolamine binding protein 1, pseudogene 266126746761268024Rat
1312007Etv1ETS variant transcription factor 166131683661408985Rat
41312804Rplp0-ps9ribosomal protein lateral stalk subunit P0, pseudogene 966141323861414011Rat
41157524LOC120103524uncharacterized LOC12010352466168396561776668Rat
41034983LOC120093442small nucleolar RNA SNORA1766212680162126932Rat
2323695St13-ps2ST13, Hsp70 interacting protein, pseudogene 266216237562164007Rat
1305611Smarce1-ps10SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, pseudogene 1066223158162232920Rat
41392365LOC120093451small nucleolar RNA SNORA1766231208662312209Rat
41025079LOC120093443U2 spliceosomal RNA66232727162327446Rat
41263556LOC120093490U2 spliceosomal RNA66235666262356816Rat
1560073Rps10-ps21ribosomal protein S10, pseudogene 2166239623262396786Rat
40972876LOC12009324760S ribosomal protein L29-like66261553563229431Rat
1588211Phb2-ps3prohibitin 2, pseudogene 366270990962713904Rat
2152Arl4aARF like GTPase 4A66280928762811297Rat
735034Scinscinderin66283664162915287Rat
1587073Lsmem1leucine-rich single-pass membrane protein 166297888062988750Rat
2867Ifrd1interferon-related developmental regulator 166299656063044996Rat
1583856Zfp277zinc finger protein 27766311060963239941Rat
41008057LOC120093202uncharacterized LOC12009320266323629363236696Rat
1561724Dock4dedicator of cytokinesis 466324005063629772Rat
2323665Immp2linner mitochondrial membrane peptidase subunit 266379718964696906Rat
2323872H3f3l1H3.3 histone like 166382724863828885Rat
7500279LOC102552766uncharacterized LOC10255276666387792863913463Rat
41339141LOC120093204uncharacterized LOC12009320466392410064035477Rat
40934694LOC120093461small nucleolar RNA SNORA1766412330364123435Rat
41334056LOC120093203uncharacterized LOC12009320366414184264157856Rat
71066Lrrn3leucine rich repeat neuronal 366421616464247293Rat
402139798LOC134479121uncharacterized LOC13447912166452860064546203Rat
41268906LOC120103525uncharacterized LOC12010352566513063465152262Rat
1589745Ndufa10l1NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 10-like 166560686665608299Rat
401993298LOC134479369uncharacterized LOC13447936966562509965625727Rat
9072809LOC103692621oligosaccharyltransferase complex subunit OSTC pseudogene66615837866180319Rat
41279995LOC120093283U6 spliceosomal RNA66633464266334748Rat
402439144LOC134479370uncharacterized LOC13447937066668843366700907Rat
402425498LOC134479371uncharacterized LOC13447937166675657666841502Rat
402049990LOC134479372uncharacterized LOC13447937266694479966965375Rat
3070Dnajb9DnaJ heat shock protein family (Hsp40) member B966699784267007371Rat
41003040LOC120103526uncharacterized LOC12010352666700079267008036Rat
1583553Dnajb6-ps4DnaJ heat shock protein family (Hsp40) member B6, pseudogene 466702469767025972Rat
1311444Pnpla8patatin-like phospholipase domain containing 866705678367118714Rat
3209Nrcamneuronal cell adhesion molecule66712972367425510Rat
41173563LOC120093276U6 spliceosomal RNA66748652467486630Rat
1598017Gpatch4-ps1G patch domain-containing protein 4, pseudogene 166752966867530911Rat
11407073LOC108351229transformer-2 protein homolog alpha pseudogene66756797167568535Rat
1598278Eno1-ps32enolase 1, pseudogene 3266757359767574880Rat
1583855Gapdh-ps92Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 9266759279567593905Rat
1306117Stxbp6syntaxin binding protein 666764772167884369Rat
41192509LOC120093462small nucleolar RNA SNORA1766792055867920685Rat
40950765LOC120093319U7 small nuclear RNA66811341468113472Rat
41372374LOC120093491U2 spliceosomal RNA66824649368246631Rat
402364174LOC134479123glyceraldehyde-3-phosphate dehydrogenase-like66825194268255230Rat
7593102LOC102555380uncharacterized LOC10255538066826702968281744Rat
7652149LOC102555435uncharacterized LOC10255543566829929468308694Rat
9317184LOC103692627uncharacterized LOC10369262766832903368376313Rat
11450428LOC108351230uncharacterized LOC10835123066833383068342273Rat
402003426LOC134479375uncharacterized LOC13447937566834484568356931Rat
402054858LOC134479374uncharacterized LOC13447937466835609368367667Rat
402259229LOC134479376uncharacterized LOC13447937666841058668509720Rat
41268372LOC120093449small nucleolar RNA SNORA1766858620668586333Rat
402061647LOC134479377uncharacterized LOC13447937766859329768601370Rat
402421690LOC134479378uncharacterized LOC13447937866871646468733843Rat
41195602LOC120093317small nucleolar RNA SNORA73 family66878225868782461Rat
402087222LOC134479379uncharacterized LOC13447937966916708669259780Rat
621345Nova1NOVA alternative splicing regulator 166950698369632437Rat
41200290LOC120093485U2 spliceosomal RNA67023999270240206Rat
41328288LOC120093502U4 spliceosomal RNA67042256270422702Rat
40947446LOC120093250uncharacterized LOC12009325067047590570505926Rat
40951447LOC120103529uncharacterized LOC12010352967067149570699913Rat
7725900LOC102556158uncharacterized LOC10255615867076148370861151Rat
1598277Kpna1-ps3karyopherin subunit alpha 1, pseudogene 367115075171152586Rat
41004139LOC120093468small nucleolar RNA SNORA1767156195071562080Rat
1334065Or5ak28-ps1olfactory receptor family 5 subfamily AK member 28, pseudogene 167194073071941383Rat
2320031LOC100364934Leydig cell tumor 10 kDa protein-like67206379072064700Rat
401996914LOC134479380uncharacterized LOC13447938067234035672400343Rat
2323500Phgdh-ps1phosphoglycerate dehydrogenase, pseudogene 167236808272369326Rat
1559629Atp5mc1l2ATP synthase membrane subunit c locus 1 like 267238108172381479Rat
2619Foxg1forkhead box G167240158272404392Rat
7619249LOC102546421uncharacterized LOC10254642167240750572424612Rat
41172264LOC120103531uncharacterized LOC12010353167241145172418800Rat
40997044LOC120093455small nucleolar RNA SNORA1767258098972581116Rat
41135267LOC120093458small nucleolar RNA SNORA1767261686072616987Rat
7627887LOC102546496uncharacterized LOC10254649667263797472664321Rat
9219694LOC103692628uncharacterized LOC10369262867273124972790949Rat
41302933Gapdh-ps90Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 9067313202773133328Rat
402403943LOC134479381uncharacterized LOC13447938167338583873445533Rat
620964Prkd1protein kinase D167346064073774433Rat
41257709LOC120103532uncharacterized LOC12010353267353040873604306Rat
7728058LOC102557478uncharacterized LOC10255747867418001774241144Rat
41010064LOC120093251uncharacterized LOC12009325167430452574307327Rat
41350299LOC120093284U6 spliceosomal RNA67436327874363385Rat
402172173LOC134479382uncharacterized LOC13447938267437923174383663Rat
402412078LOC134479383uncharacterized LOC13447938367448240774487638Rat
1310263G2e3G2/M-phase specific E3 ubiquitin protein ligase67449880174530703Rat
619828Scfd1sec1 family domain containing 167453122574609463Rat
1587060Ube2i-ps3ubiquitin-conjugating enzyme E2I, pseudogene 367453944974540831Rat
402253861LOC134479180uncharacterized LOC13447918067459218874602070Rat
2323296Snrnp48-ps2small nuclear ribonucleoprotein U11/U12 subunit 48, pseudogene 267467066674683833Rat
41281687Arl1-ps1ADP-ribosylation factor like GTPase 1, pseudogene 167469092474697539Rat
1308536Cochcochlin67476648574780504Rat
621827Strn3striatin 367478315674869473Rat
1311990Ap4s1adaptor related protein complex 4 subunit sigma 167486374274916907Rat
1561653Hectd1HECT domain E3 ubiquitin protein ligase 167491680375003408Rat
41293354LOC120103536uncharacterized LOC12010353667493428674937448Rat
402287122LOC134479181uncharacterized LOC13447918167494960674970993Rat
1561116Heatr5aHEAT repeat containing 5A67505722675155207Rat
402128941LOC134479124uncharacterized LOC13447912467515456075155246Rat
1309138Dtd2D-aminoacyl-tRNA deacylase 267518549675191774Rat
1306830Gpr33-ps1G protein-coupled receptor 33, pseudogene 167520977675210781Rat
1307232NubplNUBP iron-sulfur cluster assembly factor like67529460975516603Rat
11440663LOC108351235tensin-2 pseudogene67533011375341319Rat
1595110Cers5-ps1ceramide synthase 5, pseudogene 167555920175565413Rat
402430640LOC134479384uncharacterized LOC13447938467560364575608154Rat
1308507Arhgap5Rho GTPase activating protein 567571119975774636Rat
41103385LOC120093278U6 spliceosomal RNA67580371275803818Rat
40945147LOC120093279U6 spliceosomal RNA67580439975804505Rat
69412Akap6A-kinase anchoring protein 667591935076359667Rat
1307181Npas3neuronal PAS domain protein 367643806477263185Rat
41254020LOC120093508U6 spliceosomal RNA67654918176549287Rat
7629096LOC102547735uncharacterized LOC10254773567660871276635185Rat
41384656LOC120093424small nucleolar RNA SNORA2/SNORA34 family67682530276825437Rat
71019Egln3egl-9 family hypoxia-inducible factor 367738554977411015Rat
41293789Trnaa-agc62transfer RNA alanine (anticodon AGC) 6267742953977429619Rat
41212191LOC120093497U4 spliceosomal RNA67743459977434778Rat
41343341LOC120093379U1 spliceosomal RNA67744186577442023Rat
7578757LOC102547890uncharacterized LOC10254789067756080877567625Rat
402322711LOC134479208uncharacterized LOC13447920867757278377586252Rat
1559672Timm23btranslocase of inner mitochondrial membrane 23B67758048277581577Rat
2322683Nkapd1-ps1NKAP domain containing 1, pseudogene 167763130477634427Rat
9129693LOC103692636uncharacterized LOC10369263667763807877651639Rat
401982035LOC134479385uncharacterized LOC13447938567768530677692924Rat
2323006Rps10l1ribosomal protein S10-like 167776610377766657Rat
1559724Rps19-ps18ribosomal protein S19, pseudogene 1867780670877807217Rat
41227971LOC120093434small nucleolar RNA SNORA4867783652377836664Rat
402041290LOC134479386uncharacterized LOC13447938667783814777880254Rat
1309624EappE2F-associated phosphoprotein67787963477929653Rat
1565821Sptssaserine palmitoyltransferase, small subunit A67787993177891344Rat
41195836LOC120093301U6 spliceosomal RNA67791068677910785Rat
7646071Cetn4-ps1centrin 4, pseudogene 167791282277916978Rat
41029885LOC120093291U1 spliceosomal RNA67792987777930040Rat
41303109LOC120093206uncharacterized LOC12009320667793578577945714Rat
41114950LOC120093357U1 spliceosomal RNA67793827877938441Rat
41074541LOC120093346U1 spliceosomal RNA67794097377941136Rat
41245801LOC120093302U1 spliceosomal RNA67794665677946819Rat
41140941LOC120093313U1 spliceosomal RNA67795388877954051Rat
7561334LOC102548522uncharacterized LOC10254852267795827377964927Rat
41319468LOC120093324U1 spliceosomal RNA67795956977959732Rat
41367672LOC120093335U1 spliceosomal RNA67796224377962406Rat
1304647Snx6sorting nexin 667796614178009343Rat
7646365LOC102548461uncharacterized LOC10254846167799480278028176Rat
40971021LOC120093210uncharacterized LOC12009321067804168078051260Rat
9167354LOC103695296glyceraldehyde-3-phosphate dehydrogenase pseudogene67806381078065005Rat
1306982Cfl2cofilin 267809084378094888Rat
1306199Baz1abromodomain adjacent to zinc finger domain, 1A67812487278247672Rat
11491526LOC108351236uncharacterized LOC10835123667822832078257549Rat
41278108LOC120093303U6 spliceosomal RNA67822958778229694Rat
13046242700097O09RiklRIKEN cDNA 2700097009 gene like67827775778322329Rat
621390Srp54asignal recognition particle 54A67832230878362017Rat
2323636Fam177a1family with sequence similarity 177, member A167836778078382703Rat
402254339LOC134479210uncharacterized LOC13447921067837193278373224Rat
1309207Ppp2r3cprotein phosphatase 2, regulatory subunit B'', gamma67838284978406037Rat
1305089Prorpprotein only RNase P catalytic subunit67840482178497562Rat
61849Psma6proteasome 20S subunit alpha 667850067678531693Rat
3171NfkbiaNFKB inhibitor alpha67859384478597307Rat
1359133Aldoart2aldolase 1 A retrogene 267867494578676635Rat
1306949Insm2INSM transcriptional repressor 267870898378711575Rat
620642Ralgapa1Ral GTPase activating protein catalytic subunit alpha 167871255478987486Rat
402396223LOC134479209high mobility group protein B1-like67895260678955949Rat
2325062Ftl1l2ferritin light chain 1 like 267897771278987254Rat
4888535Mir3593microRNA 359367898775578987845Rat
7744426LOC102546497uncharacterized LOC10254649767900008479001620Rat
1306006Brms1lBRMS1 like transcriptional repressor67900180379035735Rat
40967547LOC120093292U6 spliceosomal RNA67909481879094920Rat
1598274Gapdh-ps103Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 10367922321079224193Rat
1598273Ldha-ps5lactate dehydrogenase A, pseudogene 567925344279254497Rat
41331265Ldha-ps26lactate dehydrogenase A, pseudogene 2667926306379264127Rat
41086662Ldha-ps27lactate dehydrogenase A, pseudogene 2767927268479273744Rat
11370304LOC108351238uncharacterized LOC10835123867945396279460454Rat
41335350LOC120093450small nucleolar RNA SNORA1767945506179455191Rat
41075203LOC120103538uncharacterized LOC12010353867946132779500658Rat
402061763LOC134479387uncharacterized LOC13447938767948829179509827Rat
1306310MbipMAP3K12 binding inhibitory protein 167954322379560476Rat
402082595LOC134479388uncharacterized LOC13447938867959398879598090Rat
7751922LOC102551688uncharacterized LOC10255168867961940979647181Rat
6489654LOC100911923uncharacterized LOC10091192367968935379729424Rat
3866Nkx2-1NK2 homeobox 167973167779735952Rat
7748644LOC102552092uncharacterized LOC10255209267973505579746528Rat
41393512LOC120093467small nucleolar RNA SNORA1767975128679751404Rat
402013645LOC134479125transcription factor BTF3-like67976788979770744Rat
1598272Pmpcb-ps2peptidase, mitochondrial processing subunit beta, pseudogene 267977078879778091Rat
1310629Nkx2-8NK2 homeobox 867982134279823045Rat
2321461Rpl15-ps2ribosomal protein L15, pseudogene 267985323979853858Rat
1560838Pax9paired box 967991746679938551Rat
621444Slc25a21solute carrier family 25 member 2167993848080437937Rat
7624969Alg11-ps2ALG11, alpha-1,2-mannosyltransferase, pseudogene 267999429179996056Rat
11452082LOC108351240uncharacterized LOC10835124068005482380068706Rat
402268633LOC134479389uncharacterized LOC13447938968018360580213734Rat
41044899LOC120103539uncharacterized LOC12010353968038913780401836Rat
41305281Trnav-aac44transfer RNA valine (anticodon AAC) 4468042908280429162Rat
6504372Mipol1mirror-image polydactyly 168049033080825413Rat
1359636Prps1l3phosphoribosyl pyrophosphate synthetase 1-like 368049035380498539Rat
40963012LOC120093310U6 spliceosomal RNA68054080980540896Rat
2807Foxa1forkhead box A168083838080871195Rat
1560556Ttc6tetratricopeptide repeat domain 668087205581103170Rat
41155391LOC120093489U2 spliceosomal RNA68095155980951724Rat
1598271Rps6-ps8ribosomal protein S6, pseudogene 868103073381031505Rat
41033385LOC120093510U6 spliceosomal RNA68137204581372151Rat
1587663Ldha-ps17lactate dehydrogenase A, pseudogene 1768146188881463696Rat
3762Sstr1somatostatin receptor 168156723781571759Rat
1306232Clec14aC-type lectin domain containing 14A68161641481619556Rat
402150356LOC134479390uncharacterized LOC13447939068180563781812349Rat
1586499G3bp1-ps7G3BP stress granule assembly factor 1, pseudogene 768203259682038960Rat
1586488Ddx21-ps10DExD-box helicase 21, pseudogene 1068213425382135620Rat
41050981LOC120093454U2 spliceosomal RNA68223024082230410Rat
1586460Mrto4-ps8mRNA turnover 4, ribosome maturation factor, pseudogene 868234317782343993Rat
41067375Prelid1-ps3PRELI domain containing 1, pseudogene 368235132082352155Rat
402073513LOC134479126RAD9, HUS1, RAD1-interacting nuclear orphan protein 1-like68235407282354770Rat
1586428Eif4a1-ps8eukaryotic translation initiation factor 4A1, pseudogene 868235875882360076Rat
1309103Sec23aSec23 homolog A, COPII coat complex component68239369982442594Rat
402249844LOC134479211high mobility group protein B1-like68242279982424467Rat
620842Gemin2gem (nuclear organelle) associated protein 268244241982456050Rat
1588546Cyp51a1-ps1cytochrome P450, family 51, subfamily a, polypeptide 1, pseudogene 168246031782462468Rat
41148093U2l3U2 spliceosomal RNA like 368246583482466024Rat
1309325Trappc6btrafficking protein particle complex subunit 6B68247579482486928Rat
1597086Pnnpinin, desmosome associated protein68249303282501345Rat
6488546Mia2MIA SH3 domain ER export factor 268252239882620136Rat
41035462Snora26l1small nucleolar RNA, H/ACA box 26 like 168255844882558569Rat
1307543Fbxo33F-box protein 3368263550982669441Rat
9159722LOC103695309glyceraldehyde-3-phosphate dehydrogenase pseudogene68280345382804508Rat
41087372LOC120093280U6 spliceosomal RNA68297198582972091Rat
402353658LOC134479212protein NYNRIN-like68303017483035635Rat
41111149LOC120093440small nucleolar RNA SNORA1768319853283198661Rat
41209044Hsp90ab1-ps16heat shock protein 90 alpha family class B member 1, pseudogene 1668323733983246224Rat
1563850Akr1b8-ps2aldo-keto reductase family 1, member B8, pseudogene 268330469883307067Rat
41271388LOC120093314U6 spliceosomal RNA68330633083306435Rat
1598269Paics-ps4phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase, pseudogene 468342075883422181Rat
40978870LOC120093300U6 spliceosomal RNA68349031583490422Rat
1598344Pcna-ps1proliferating cell nuclear antigen, pseudogene 168352720283529011Rat
402137787LOC134479391uncharacterized LOC13447939168360427483626330Rat
1598268Nt5c2-ps45'-nucleotidase, cytosolic II, pseudogene 468361311783615005Rat
11455066LOC108351364uncharacterized LOC10835136468386045583873003Rat
1582962Apoo-ps1apolipoprotein O, pseudogene 168459381684594636Rat
1582948Sec13-ps3SEC13 homolog, nuclear pore and COPII coat complex component, pseudogene 368463660284638103Rat
1582931Pcbp2-ps9poly(rC) binding protein 2, pseudogene 968489777484898721Rat
2322884Entr1l1endosome associated trafficking regulator 1 like 168506628785067706Rat
1309357Lrfn5leucine rich repeat and fibronectin type III domain containing 568520146585557872Rat
1560665Timm17al1translocase of inner mitochondrial membrane 17a-like 168537210485372927Rat
41016925U3l1small nucleolar RNA U3 like 168539124985391437Rat
41370298Ppa2-ps1inorganic pyrophosphatase 2, pseudogene68559161685595393Rat
40998590LOC120093311U6 spliceosomal RNA68563653385636636Rat
40957535LOC120093486U2 spliceosomal RNA68595049785950700Rat
1597397Cct6a-ps11chaperonin containing Tcp1, subunit 6A (zeta 1), pseudogene 1168621896886222414Rat
2319091Gemin8-ps1gem (nuclear organelle) associated protein 8, pseudogene 168629897886299659Rat
2322517Fam167b-ps1family with sequence similarity 167, member B, pseudogene 168636467986365124Rat
2322466Trim13-ps1tripartite motif-containing 13, pseudogene 168642896386430291Rat
41194368LOC120093500U4 spliceosomal RNA68659815486598288Rat
402334021LOC134479392uncharacterized LOC13447939268683469086838089Rat
402281726LOC134479284high mobility group protein B1-like68759958187600357Rat
402059360LOC134479285uncharacterized LOC13447928568772648187727968Rat
9242302LOC103692643uncharacterized LOC10369264368811055688114055Rat
1561721Fscbfibrous sheath CABYR binding protein68826413388266925Rat
41179368LOC120093436small nucleolar RNA SNORA1768851391788514048Rat
41359618LOC120093501U4 spliceosomal RNA68853737488537490Rat
11387951Ppia-ps6peptidylprolyl isomerase A, pseudogene 668854984288550343Rat
1596109Eif2d-ps2eukaryotic translation initiation factor 2D, pseudogene 268860305088604931Rat
1307621Dorip1dopamine receptor interacting protein 168870165188710204Rat
1311326Klhl28kelch-like family member 2868872362488755072Rat
1310474Togaram1TOG array regulator of axonemal microtubules 168875526488819599Rat
1308702Prpf39pre-mRNA processing factor 3968882522788851342Rat
41104710Snord127small nucleolar RNA, C/D box 12768884484888844932Rat
1304992Fkbp3FKBP prolyl isomerase 368885013788862542Rat
1307897FancmFA complementation group M68886289888916701Rat
1594757Mis18bp1MIS18 binding protein 168891874388968225Rat
1597505Faul1FAU ubiquitin like and ribosomal protein S30 fusion like 168896478688965507Rat
6497625Vdac1-ps15voltage-dependent anion channel 1, pseudogene 1568901471089015725Rat
402203632LOC134479286uncharacterized LOC13447928668903881389041993Rat
41120331LOC120093256uncharacterized LOC12009325668905038889089393Rat
41156721LOC120093430small nucleolar RNA SNORA4868914292489143059Rat
40958936LOC120093448small nucleolar RNA SNORA1768925294589253073Rat
41023230LOC120093444small nucleolar RNA SNORA1768943030589430436Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
33977D6Mit424666345744163457687Ratregion
33993D6Mit214768686792386868070Ratregion
34184D6Mgh1116365368492153685084Ratregion
34306D6Mgh59667919846379198559Ratregion
37222D6Rat8221764871328748713504Ratregion
35447D6Rat5117564952898849529163Ratregion
36813D6Rat2015868451273684512894Ratregion
36856D6Rat4914268024327980243421Ratregion
37662D6Rat9226964540022445400493Ratregion
37876D6Rat5919868805313688053334Ratregion
37972D6Rat6419065835950958359699Ratregion
36452D6Rat2513466303731963037453Ratregion
36534D6Rat3216564737833947378504Ratregion
36560D6Rat3417264544329445443466Ratregion
36648D7Rat3817166480327464803445Ratregion
34835D6Rat2811864605060746050725Ratregion
35036D6Rat2412266720787267207994Ratregion
35140D6Rat228967832875278328841Ratregion
35583D6Rat5017166701088967011060Ratregion
35631D6Rat13715764885800348858160Ratregion
35727D6Rat1913868436486284365000Ratregion
35911D6Rat3320664515378645153992Ratregion
39972D6Rat13222765654583756546064Ratregion
38220D6Rat6723564828760748287842Ratregion
38758D6Rat8314464598608545986229Ratregion
40206D6Rat15516665093089250931058Ratregion
40240D6Rat13312965460132454601453Ratregion
38930D6Rat6124964830361048303859Ratregion
38978D6Rat9820968265755382657762Ratregion
39022D6Rat6021365770406957704282Ratregion
39132D6Rat7026068485281784853077Ratregion
39340D6Rat7321067518441175184621Ratregion
39572D6Rat14011864615963046159748Ratregion
42781D6Rat20722364729108947291312Ratregion
42782D6Rat20621465320157253201786Ratregion
42784D6Rat20124067008429570084535Ratregion
42785D6Rat16817166190109561901266Ratregion
42786D6Rat16920366876727068767473Ratregion
42787D6Rat20211166473845464738565Ratregion
42788D6Rat20421966708945167089670Ratregion
42789D6Rat20324866622911666229364Ratregion
42792D6Rat19921167551020975510420Ratregion
42793D6Rat16722468451269684512920Ratregion
41444D6Rat13117865959745259597630Ratregion
42325D6Rat22123067095005770950287Ratregion
42326D6Rat22023167827338078273611Ratregion
42327D6Rat21923068114676481146994Ratregion
40770D6Rat13924564536280745363052Ratregion
40872D6Rat12820767942707779427284Ratregion
41006D6Rat13623265262526852625500Ratregion
41052D6Rat12919267919838579198577Ratregion
41064D6Rat13419565343753553437730Ratregion
41068D6Rat12725068009199480092244Ratregion
41608D6Rat14226864764081347641081Ratregion
41668D6Rat17023965127524151275480Ratregion
44079D6Got6423565592328555923520Ratregion
44080D6Got618365504743655047519Ratregion
44103D6Got9121967606601176066230Ratregion
44105D6Got8810967642017476420283Ratregion
44109D6Wox317167905987479060045Ratregion
44116D6Got9215568137834381378498Ratregion
44067D6Got4912064631135946311479Ratregion
60542D6Got4620364530051845300721Ratregion
60544D6Got5124664747695547477201Ratregion
60501D6Got10614368923615989236302Ratregion
62501D6Uia334965058554850585897Ratregion
67225D6Arb1513066966117169661301Ratregion
67230D6Arb2223367623718376237416Ratregion
67277D6Arb835764606374146064098Ratregion
1628556D6Got31017568525107085251245Ratregion
1639193D6Wox247364606386946063942Ratregion
1639973D6Got32613067752691577527045Ratregion
5035959PMC317134P194867992179579922743Ratregion
5038836RH12736035464580939045809744Ratregion
5034043RH14114521564862839948628614Ratregion
5026882RH13389019068245585582456045Ratregion
5025098AW82363313364550244145502574Ratregion
5028009M6364918765640367456403861Ratregion
5052123RH9485321968083866080838879Ratregion
5051881RH9471212868157058481570712Ratregion
5052121RH9485211564746918447469299Ratregion
5053135RH14247421965857640258576621Ratregion
5050820RH13427719364880235048802543Ratregion
5044136RH13043033165865693858657269Ratregion
5046102RH13155922068161397681614196Ratregion
5047758RH13251119367604468676044879Ratregion
5048620RH13300820468894209088942294Ratregion
5042688RH12958516767821577878215945Ratregion
5080334RH14151921164655002446550235Ratregion
5080390RH14155164267859432678594968Ratregion
5066860AU04810815466584765865847812Ratregion
5066876AU04809824566836444568364690Ratregion
5069080AU04673718868947415889474346Ratregion
5069794AU02866910265619841656198518Ratregion
5089495AU04918926566681360266813867Ratregion
5089981AU04947922064538709845387318Ratregion
5084542AI17038924468161671081616954Ratregion
5083369AA81873616768250172782501894Ratregion
5506086Myt1l58265228854452289126Ratregion
5502573RH12541077564580395445804729Ratregion
Position Markers

Peak: (D6Rat50)
Rat AssemblyChrPosition (strand)Source
GRCr8667,010,889 - 67,011,060 (+)Marker Load Pipeline
mRatBN7.2661,283,904 - 61,284,075 (+)MAPPER
Rnor_6.0664,178,961 - 64,179,131NCBI
Rnor_5.0673,767,746 - 73,767,916UniSTS
RGSC_v3.4663,596,060 - 63,596,414RGD
RGSC_v3.4663,596,086 - 63,596,256UniSTS
RGSC_v3.1663,599,212 - 63,599,382RGD
Celera660,280,253 - 60,280,423UniSTS
RH 3.4 Map6441.0UniSTS
RH 3.4 Map6441.0RGD
RH 2.0 Map6617.4RGD
FHH x ACI Map652.5699RGD


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
8552962Pigfal16Plasma insulin-like growth factor 1 level QTL 169.4blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)6197587946975879Rat
9590290Uminl2Urine mineral level QTL 23.960.001urine mineral amount (VT:0015086)urine electrolyte level (CMO:0000593)64451097489510974Rat
4889933Bss88Bone structure and strength QTL 883.8tibia size trait (VT:0100001)tibia total bone volume (CMO:0001724)65368492198684921Rat
10401812Kidm54Kidney mass QTL 54kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)62009763565097635Rat
1331743Uae28Urinary albumin excretion QTL 284.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)64515378690153786Rat
61329Eae9Experimental allergic encephalomyelitis QTL 93.7body mass (VT:0001259)change in body weight (CMO:0002045)684490437129490437Rat
10401800Kidm49Kidney mass QTL 49kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)62009763565097635Rat
9589129Insul24Insulin level QTL 2419.060.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)6197587946975879Rat
70176Mcsm1Mammary carcinoma susceptibility modifier QTL 1mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)664367996109367996Rat
7411542Bw127Body weight QTL 1275.50.001body mass (VT:0001259)body weight gain (CMO:0000420)6197587946975879Rat
724524Uae2Urinary albumin excretion QTL 22.70.0005urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)679198463144254945Rat
737827Hcar11Hepatocarcinoma resistance QTL 114.4liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)646050607116278722Rat
2292616Ept15Estrogen-induced pituitary tumorigenesis QTL 154.4pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)6144788383Rat
9589048Scfw3Subcutaneous fat weight QTL 34.570.001subcutaneous adipose mass (VT:1000472)abdominal subcutaneous fat pad weight (CMO:0002069)6197587946975879Rat
724513Uae14Urinary albumin excretion QTL 146.5urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)64604735391047353Rat
2301964Bp323Blood pressure QTL 3234.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)6186868070Rat
2293650Bss31Bone structure and strength QTL 315.050.0001femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)6323998948239989Rat
9590306Scort18Serum corticosterone level QTL 182.880.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)64451097489510974Rat
1578665Bss16Bone structure and strength QTL 164.4femur morphology trait (VT:0000559)bone trabecular cross-sectional area (CMO:0002311)63332884178328841Rat
4889848Pur25Proteinuria QTL 25140.003urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)66303731995934232Rat
1641898Colcr4Colorectal carcinoma resistance QTL43.710.0007intestine integrity trait (VT:0010554)well differentiated malignant colorectal tumor surface area measurement (CMO:0002077)63093763275937632Rat
1578668Bmd14Bone mineral density QTL 143.8femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)63332884178328841Rat
5684963Bss99Bone structure and strength QTL 993.1tibia area (VT:1000281)tibia area measurement (CMO:0001382)65368492198684921Rat
70199Coreg1Compensatory renal growth QTL 111.8kidney mass (VT:0002707)compensatory renal growth score (CMO:0001894)61459947363457687Rat
2301972Bp325Blood pressure QTL 3254.8arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)61608937261967788Rat
2293656Bss28Bone structure and strength QTL 286.790.0001femur morphology trait (VT:0000559)femur midshaft cortical cross-sectional area (CMO:0001663)6323998948239989Rat
1354664Slep2Serum leptin concentration QTL 24.49blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)62228825767288257Rat
1300143Rf14Renal function QTL 142.92renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)64016318385163183Rat
2293088Iddm28Insulin dependent diabetes mellitus QTL 285.21blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)668767270135411972Rat
1331799Bp211Blood pressure QTL 2113.66407arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)688019181136741135Rat
634318Bw118Body weight QTL 1183.55abdominal fat pad mass (VT:1000711)abdominal fat pad weight (CMO:0000088)63902865963457441Rat
634307Bp141Blood pressure QTL 1414arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)64095756485957564Rat
8552910Pigfal5Plasma insulin-like growth factor 1 level QTL 54.3blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)62265388967653889Rat
5684992Bmd83Bone mineral density QTL 824.8tibia mineral mass (VT:1000283)bone mineral content (CMO:0001554)65368492198684921Rat
1300164Rf15Renal function QTL 153.12renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)6323998948239989Rat
1331779Rf38Renal function QTL 382.876kidney blood vessel physiology trait (VT:0100012)absolute change in renal vascular resistance (CMO:0001900)63118500276185002Rat
1331789Rf37Renal function QTL 373.224kidney blood vessel physiology trait (VT:0100012)absolute change in renal vascular resistance (CMO:0001900)686494122112380234Rat
4145119Mcs25Mammary carcinoma susceptibility QTL 250.0001mammary gland integrity trait (VT:0010552)ratio of deaths to total study population during a period of time (CMO:0001023)671278722116278722Rat
7411603Foco13Food consumption QTL 135.50.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)6197587946975879Rat
1598843Cm63Cardiac mass QTL 632.6heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)6144788383Rat
1558641Cm47Cardiac mass QTL 472.90.001heart mass (VT:0007028)heart wet weight (CMO:0000069)66345744194939581Rat
2293839Kiddil2Kidney dilation QTL 24.8kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)62661831486868070Rat
1576309Emca7Estrogen-induced mammary cancer QTL 74mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)620859430113082285Rat
9590140Scort4Serum corticosterone level QTL 414.490.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)64451097489510974Rat
2293837Kiddil1Kidney dilation QTL 13.7kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)686867923110125012Rat
2293709Bss23Bone structure and strength QTL 235.180.0001femur morphology trait (VT:0000559)femur cross-sectional area (CMO:0001661)6323998948239989Rat
2293842Kiddil3Kidney dilation QTL 34.3kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)686867923110125012Rat
2293841Kiddil4Kidney dilation QTL 44.4kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)62661831486868070Rat
6893340Cm77Cardiac mass QTL 770.260.57heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)63902865986867923Rat
1576302Schws4Schwannoma susceptibility QTL 40.0078nervous system integrity trait (VT:0010566)percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)678204640123204640Rat
1300075Glom7Glomerulus QTL 75.60.0000002kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)676937178121937178Rat
1358190Ept1Estrogen-induced pituitary tumorigenesis QTL 14.4pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)6144788383Rat
6893332Cm74Cardiac mass QTL 740.40.64heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)66345744194939581Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_general confidence interval 77.7-84.2 Mb 8694157
qtl_general number of animals used: 93 F2 males and 94 F2 females 8694157
qtl_general measurement method: blood samples were taken in the morning and collected on EDTA, centrifuged at 4000g for 10 min to extract the plasma, plasma corticosterone was measured with an in-house RIA kit using an anti-Cort antibody 8694157
qtl_general software package used: MultiQTL software 8694157