Scort4 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL: Scort4 (Serum corticosterone level QTL 4) Rattus norvegicus

Symbol: Scort4
Name: Serum corticosterone level QTL 4
RGD ID: 9590140
Also known as: plasma cort at basal level; plasma corticosterone at basal level
Trait: blood corticosterone amount   (VT:0005345)    
Measurement Type: plasma corticosterone level   (CMO:0001173)    
LOD Score: 14.49
P Value: 0.001
Variance: 15.4
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2638,783,989 - 83,783,989RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0641,679,046 - 86,679,046RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0651,267,831 - 96,267,831RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.4641,096,237 - 86,096,237RGD_MAPPER_PIPELINERGSC3.4
Cross Type: intercross
Strains Crossed: F344/IcoCrlf LOU/NimrOlaHsd 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain

References

References - curated
1. Marissal-Arvy N, etal., Horm Metab Res. 2014 Jul 8.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
2074Ahraryl hydrocarbon receptor65223408952271568Rat
3979Ywhaqtyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta64093571440966240Rat
71066Lrrn3leucine rich repeat neuronal 365848906058520322Rat
2619Foxg1forkhead box G166667479766677611Rat
619949Kidins220kinase D-interacting substrate 22064161820741706990Rat
2807Foxa1forkhead box A167509990775136534Rat
61849Psma6proteasome 20S subunit alpha 667276553472796554Rat
3209Nrcamneuronal cell adhesion molecule66140281361698536Rat
3293Slc26a4solute carrier family 26 member 464810757548153762Rat
3900Tpothyroid peroxidase64669840246768199Rat
69351Sox11SRY-box transcription factor 1164400833344010354Rat
2859Id2inhibitor of DNA binding 264174055641742393Rat
3762Sstr1somatostatin receptor 167583229275836806Rat
61907Rps7ribosomal protein S764526620045271064Rat
3394Prkar2bprotein kinase cAMP-dependent type II regulatory subunit beta64856365948653933Rat
2152Arl4aADP-ribosylation factor like GTPase 4A65707949657084156Rat
3171NfkbiaNFKB inhibitor alpha67285871372861941Rat
3227Odc1ornithine decarboxylase 164032983140336444Rat
3590Rock2Rho-associated coiled-coil containing protein kinase 263967911639774033Rat
727828Adi1acireductone dioxygenase 164530688545313847Rat
621507Bzw2basic leucine zipper and W2 domains 265282806952888599Rat
621827Strn3striatin 366904777669134102Rat
621345Nova1NOVA alternative splicing regulator 166378010563905950Rat
631414Kcnf1potassium voltage-gated channel modifier subfamily F member 163996230139964979Rat
620550Myt1lmyelin transcription factor 1-like64616474246564234Rat
727866Iah1isoamyl acetate hydrolyzing esterase 164086553040872747Rat
620404Adam17ADAM metallopeptidase domain 1764087293640920700Rat
628688Pdia6protein disulfide isomerase family A, member 664006298040080223Rat
621455Twist1twist family bHLH transcription factor 165067491050676904Rat
621390Srp54asignal recognition particle 54A67258758272645154Rat
631365Namptnicotinamide phosphoribosyltransferase64942531649462109Rat
628877Sostdc1sclerostin domain containing 165305133653055510Rat
620495Rsad2radical S-adenosyl methionine domain containing 264304651443059737Rat
71019Egln3egl-9 family hypoxia-inducible factor 367165029771675766Rat
735073Dlddihydrolipoamide dehydrogenase64790415347924814Rat
3070Dnajb9DnaJ heat shock protein family (Hsp40) member B966127038561276795Rat
621444Slc25a21solute carrier family 25 member 2167420343974702902Rat
620964Prkd1protein kinase D166772519368039002Rat
70962Ntsr2neurotensin receptor 263942429739431015Rat
620623Slc26a3solute carrier family 26 member 364802389248064829Rat
3079Meox2mesenchyme homeobox 265385676053917467Rat
620444Hbp1HMG-box transcription factor 164852963348555775Rat
708375Hpcal1hippocalcin-like 164047818240584721Rat
2020Acp1acid phosphatase 164750638047522021Rat
620842Gemin2gem (nuclear organelle) associated protein 267670642476721154Rat
1304606Agr2anterior gradient 2, protein disulphide isomerase family member65270860252729378Rat
619828Scfd1sec1 family domain containing 166879581068874076Rat
1306830Gpr33G protein-coupled receptor 3366947443569475440Rat
1306818Slc66a3solute carrier family 66 member 363977480139786554Rat
621804Allcallantoicase64517918145214275Rat
1304647Snx6sorting nexin 667223095072274157Rat
2488Dgkbdiacylglycerol kinase, beta65464094855397210Rat
3866Nkx2-1NK2 homeobox 167399660174001483Rat
1305735Grhl1grainyhead-like transcription factor 164120732541257516Rat
1307810Itgb1bp1integrin subunit beta 1 binding protein 164082069340836074Rat
1307232Nubplnucleotide binding protein-like66955927869781254Rat
1306017Ankmy2ankyrin repeat and MYND domain containing 265288896352930341Rat
1306468Pik3cgphosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit gamma64876677848802098Rat
1306328Prps1l1phosphoribosyl pyrophosphate synthetase 1-like 165168496051686650Rat
1304992Fkbp3FKBP prolyl isomerase 368311388583125500Rat
1305798Mboat2membrane bound O-acyltransferase domain containing 264147113541597599Rat
1305089Prorpprotein only RNase P catalytic subunit67266965972762419Rat
1305817Eipr1EARP complex and GARP complex interacting protein 164538845145502089Rat
620642Ralgapa1Ral GTPase activating protein catalytic subunit alpha 167297743273252378Rat
1306117Stxbp6syntaxin binding protein 666192075662157405Rat
2867Ifrd1interferon-related developmental regulator 165726939557317833Rat
1307897FancmFA complementation group M68312690383180455Rat
1306440Sh3yl1SH3 and SYLF domain containing 164752209847565858Rat
69412Akap6A-kinase anchoring protein 667018410170624369Rat
1306310MbipMAP3K12 binding inhibitory protein 167380813373825394Rat
1306311Lamb1laminin subunit beta 164783549247902585Rat
1304624RGD1304624similar to RIKEN cDNA 2700097O0967254216672587511Rat
1306982Cfl2cofilin 267235566472359709Rat
1307621RGD1307621hypothetical LOC31416868296530482973942Rat
1306646Klf11Kruppel-like factor 1164128569941297548Rat
1305730Atxn7l1ataxin 7-like 164975987649982323Rat
1306006Brms1lBRMS1 like transcriptional repressor67326667373300631Rat
735034Scinscinderin65711012857188059Rat
1305881Cmpk2cytidine/uridine monophosphate kinase 264307370643085183Rat
631412E2f6E2F transcription factor 663959222439608685Rat
1305611Smarce1lSWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1-like65650447856505695Rat
1311990Ap4s1adaptor related protein complex 4 subunit sigma 166913340369174488Rat
1308507Arhgap5Rho GTPase activating protein 566997590470039299Rat
1309138Dtd2D-aminoacyl-tRNA deacylase 266945014669456430Rat
1560556Ttc6tetratricopeptide repeat domain 667513682775368176Rat
1359368CrppaCDP-L-ribitol pyrophosphorylase A65312026453397030Rat
1309778Snx13sorting nexin 1365175825851862260Rat
1559724RGD1559724similar to 40S ribosomal protein S1967206650372072009Rat
1311276Sntg2syntrophin, gamma 264680137747003424Rat
1311326Klhl28kelch-like family member 2868298736083018971Rat
1310848Gpr22G protein-coupled receptor 2264830961948317864Rat
1359389Tmem18transmembrane protein 1864720684547214294Rat
1310748Hdac9histone deacetylase 965076207451624311Rat
1312038Agmoalkylglycerol monooxygenase65398623654317838Rat
1560395Lrrc72leucine rich repeat containing 7265293538752995552Rat
1310474Togaram1TOG array regulator of axonemal microtubules 168301902583083343Rat
1309012Rnaseh1ribonuclease H164528284945292258Rat
1311444Pnpla8patatin-like phospholipase domain containing 866132981061391736Rat
1311445Dus4ldihydrouridine synthase 4-like64822811148242553Rat
1560694Pxdnperoxidasin64658074946658345Rat
1310629Nkx2-8NK2 homeobox 867408627474087977Rat
1310263G2e3G2/M-phase specific E3 ubiquitin protein ligase66876384768795305Rat
1306199Baz1abromodomain adjacent to zinc finger domain, 1A67238970172512516Rat
1310703Cbll1Cbl proto-oncogene like 164807119048086174Rat
1307543Fbxo33F-box protein 3367690061976934232Rat
1306232Clec14aC-type lectin domain containing 14A67588147075884612Rat
1309207Ppp2r3cprotein phosphatase 2, regulatory subunit B'', gamma67264702572670885Rat
1306949Insm2INSM transcriptional repressor 267297389772977777Rat
1308702Prpf39pre-mRNA processing factor 3968308898183113826Rat
1307824Polr1fRNA polymerase I subunit F65005328950070514Rat
1308536Cochcochlin66903113969045124Rat
1309624EappE2F-associated phosphoprotein67216648672194357Rat
1309103Sec23aSec23 homolog A, COPII coat complex component67665879376706125Rat
1307181Npas3neuronal PAS domain protein 367070277371527928Rat
1309678Colec11collectin sub-family member 1164522397445256640Rat
1305767Cpsf3cleavage and polyadenylation specific factor 364083612140864129Rat
1309357Lrfn5leucine rich repeat and fibronectin type III domain containing 567946640379822821Rat
1305263Asap2ArfGAP with SH3 domain, ankyrin repeat and PH domain 264065820140821017Rat
1307646Lpin1lipin 163930919839417034Rat
1307943Efcab10EF-hand calcium binding domain 1065000447950011398Rat
1309325Trappc6btrafficking protein particle complex subunit 6B67674089876752035Rat
1563850RGD1563850similar to Aldo-keto reductase family 1, member B867756972077571967Rat
1559629RGD1559629similar to H+ ATP synthase66665418766654763Rat
1359636LOC314140ribose-phosphate pyrophosphokinase I -like67475533174764179Rat
1563296Cog5component of oligomeric golgi complex 564824247048545185Rat
1561653Hectd1HECT domain E3 ubiquitin protein ligase 166918142969267803Rat
1560812Ccdc71lcoiled-coil domain containing 71-like64895991348964112Rat
1561890RGD1561890similar to craniofacial development protein 164025471740255884Rat
1311812Ferd3lFer3-like bHLH transcription factor65064537950646268Rat
1359430Atp6v1c2ATPase H+ transporting V1 subunit C264008054540144199Rat
1359431Bcap29B-cell receptor-associated protein 2964818270248222698Rat
1559651Dcdc2cdoublecortin domain containing 2C64510383845179040Rat
1312007Etv1ETS variant transcription factor 165559014955681784Rat
1561116Heatr5aHEAT repeat containing 5A66932186969419861Rat
1334065Olr873-psolfactory receptor pseudogene 87366621392966214582Rat
1560073RGD1560073similar to ribosomal protein S1065666910356669605Rat
1564713Fam110cfamily with sequence similarity 110, member C64763846647644723Rat
1311788Tspan13tetraspanin 1365273874852765503Rat
1560838Pax9paired box 967418674974203508Rat
1359133Aldoart2aldolase 1 A retrogene 267293982172941511Rat
1359569Sypl1synaptophysin-like 164956511149585205Rat
1586428LOC688672similar to eukaryotic translation initiation factor 4A, isoform 167662386676625179Rat
1586488LOC688612similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 21a67639943576400992Rat
1359447Nol10nucleolar protein 1064014421740225353Rat
1583855LOC298990hypothetical LOC29899066186594961866939Rat
1583856Zfp277zinc finger protein 27765738394457512785Rat
1586460LOC688640similar to muscle protein68467660827276609088Rat
1583774LOC366583similar to D-3-phosphoglycerate dehydrogenase (3-PGDH)64273609142737499Rat
1585983LOC679605similar to HIRA interacting protein 364757559047578182Rat
1583553LOC681138similar to DnaJ (Hsp40) homolog, subfamily B, member 666129754961299049Rat
1563613RGD1563613similar to 40S ribosomal protein S2565452133554521746Rat
1561721Fscbfibrous sheath CABYR binding protein68252784982530641Rat
1561724Dock4dedicator of cytokinesis 465751292957902597Rat
1565406Agr3anterior gradient 3, protein disulphide isomerase family member65264339152666638Rat
1582948LOC688959similar to SEC13-like 167890155878903012Rat
1565821Sptssaserine palmitoyltransferase, small subunit A67214471472156130Rat
1566054Trappc12trafficking protein particle complex subunit 1264532149645386967Rat
1559672Timm23btranslocase of inner mitochondrial membrane 23 homolog B67184523471846349Rat
1561737Rnf144aring finger protein 144A64289976743019769Rat
1564091Greb1growth regulating estrogen receptor binding 163944052239562364Rat
1564913Akr1b1-ps1aldo-keto reductase family 1, member B1 (aldose reductase), pseudogene 164508971745090928Rat
1582931LOC688976similar to poly(rC) binding protein 267916269279163639Rat
1582838LOC690276hypothetical protein LOC69027663979091339797066Rat
1589745Ndufa10l1NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 10-like 165987981959881252Rat
1592964LOC680365similar to tumor rejection antigen gp9665201194452016665Rat
1588546Cyp51a1-ps1cytochrome P450, family 51, subfamily a, polypeptide 1, pseudogene 167672542176727572Rat
1586499LOC688601similar to Ras-GTPase-activating protein binding protein 1 (ATP-dependent DNA helicase VIII) (GAP SH3-domain binding protein 1) (G3BP-1) (HDH-VIII)67629770776301640Rat
1587060LOC680823similar to Ubiquitin-conjugating enzyme E2 I (Ubiquitin-protein ligase I) (Ubiquitin carrier protein I) (SUMO-1-protein ligase) (SUMO-1-conjugating enzyme) (Ubiquitin-conjugating enzyme UbcE2A)66880406168805440Rat
1587663LOC688516similar to L-lactate dehydrogenase A chain (LDH-A) (LDH muscle subunit) (LDH-M)67572705975728506Rat
1587117Alkal2ALK and LTK ligand 264749564547505235Rat
1560665Timm17al1translocase of inner mitochondrial membrane 17a-like 167963705479637877Rat
1582962LOC688945hypothetical protein LOC68894567885871878859404Rat
1587073Lsmem1leucine-rich single-pass membrane protein 165725022157262240Rat
1588211LOC680755similar to B-cell receptor-associated protein 3765698154956986759Rat
1597397Cct6a-ps11chaperonin containing Tcp1, subunit 6A (zeta 1), pseudogene 1168044267280487379Rat
1598344LOC299084similar to proliferating cell nuclear antigen67779210877793917Rat
1595449LOC680175similar to 40S ribosomal protein S2065063628350636717Rat
1597086Pnnpinin, desmosome associated protein67675813876766451Rat
1596936LOC678748similar to peroxiredoxin 164706871847072828Rat
1596109LOC689195similar to TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L (PCAF-associated factor 65 beta) (PAF65-beta)68286678382868664Rat
1596058Taf1bTATA-box binding protein associated factor, RNA polymerase I subunit B64111698041194593Rat
1595110LOC685338similar to longevity assurance homolog 566982385169830063Rat
1591286Cdhr3cadherin-related family member 364964183349702016Rat
1596023Cys1cystin 164130083641318071Rat
1597342LOC690346hypothetical protein LOC69034664027018740271205Rat
1594757Mis18bp1MIS18 binding protein 168318249783231978Rat
1594139LOC680293similar to developmental pluripotency associated 4 isoform 165074524350745986Rat
1598268LOC366641similar to 5-nucleotidase, cytosolic II67787813777879911Rat
1598269LOC366640similar to Multifunctional protein ADE267768566177687084Rat
1598099LOC679971similar to carbonic anhydrase 1364939618149396963Rat
1598273LOC366627similar to L-lactate dehydrogenase A chain (LDH-A) (LDH muscle subunit) (LDH-M)67351843473519312Rat
1598274LOC366626similar to glyceraldehyde-3-phosphate dehydrogenase67348811273489095Rat
1598277LOC366613similar to Importin alpha-2 subunit (Karyopherin alpha-2 subunit) (SRP1-alpha) (RAG cohort protein 1) (Pendulin) (Pore targeting complex 58 kDa subunit) (PTAC58) (Importin alpha P1)66542390965426151Rat
1598278LOC366611similar to Alpha-enolase (2-phospho-D-glycerate hydro-lyase) (Non-neural enolase) (NNE) (Enolase 1)66184662961847912Rat
1598279LOC366601similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)65235656352357905Rat
1598017LOC681255similar to G patch domain containing 4 protein isoform 266180238961803939Rat
1598310Rrm2ribonucleotide reductase regulatory subunit M264133985841346774Rat
1598271LOC366632similar to 40S ribosomal protein S667529572875296526Rat
1598272LOC366628similar to peptidase (mitochondrial processing) beta67402462074043020Rat
1597505LOC687780similar to Finkel-Biskis-Reilly murine sarcoma virusubiquitously expressed68322875183229261Rat
1595482LOC680142similar to translocase of outer mitochondrial membrane 70 homolog A65012491150127154Rat
2319740LOC100361632hypothetical LOC10036163265395086753951745Rat
2318102LOC100362486small nuclear ribonucleoprotein D364380570943825284Rat
2320031LOC100364934Leydig cell tumor 10 kDa protein-like66633698966337899Rat
2320310LOC100361355hypothetical LOC10036135564887518648877852Rat
2319091LOC100361989mCG49489-like68056394380564624Rat
2321461LOC100360797ribosomal protein L15-like67411817574118794Rat
2322884LOC100360061mCG18732-like67933121079332658Rat
2323006Rps10l1ribosomal protein S10-like 167203087272031441Rat
2322466LOC100360285hypothetical LOC10036028568069387880695270Rat
2321713LOC100360644ribosomal protein L11-like63892067338921200Rat
2322517LOC100360233hypothetical LOC10036023368062965380630098Rat
2322612LOC100363637nucleophosmin 1-like64507348145074670Rat
2322683LOC100360166expressed sequence AU019823-like67189601971898777Rat
2321896LOC100360561Nxt2 protein-like64901409149014679Rat
2323296LOC100359846hypothetical LOC10035984666893614068948448Rat
2323500LOC100359740D-3-phosphoglycerate dehydrogenase-like66664132866642516Rat
4888535Mir3593microRNA 359367325264773252737Rat
2323636Fam177a1family with sequence similarity 177, member A167263258772647052Rat
2323665Immp2linner mitochondrial membrane peptidase subunit 265807003558970165Rat
2323695LOC100362999hsc70-interacting protein-like65643522256436810Rat
2324519LOC100362535ubiquitin-conjugating enzyme E2E 164412500944125650Rat
2323872LOC100359421histone H3.3B-like65809993058101667Rat
2323883LOC100362896prostatic binding protein-like65554026455540821Rat
2324155LOC100362703heterogeneous nuclear ribonucleoprotein A1-like65372363653732973Rat
2325062LOC100359668ferritin light chain 267324261273243527Rat
6489654LOC100911923uncharacterized LOC10091192367395425873994337Rat
6488546Mia2MIA SH3 domain ER export factor 267678750876885246Rat
6486238LOC10091255640S ribosomal protein SA-like65014805050149675Rat
6504372Mipol1mirror-image polydactyly 167475531475090403Rat
6497625LOC100910588voltage-dependent anion-selective channel protein 1-like68327846983279491Rat
6501114LOC100909845phosphoglycerate mutase 1-like64346571843466451Rat
7499548LOC102555378uncharacterized LOC10255537864808541548115642Rat
7502513LOC102556505non-POU domain-containing octamer-binding protein-like65290116152904787Rat
7526561LOC102553989uncharacterized LOC10255398964182949241855070Rat
7500641LOC102555927uncharacterized LOC10255592763877891638822800Rat
7542438LOC102547473uncharacterized LOC10254747364955278549565067Rat
7505429LOC102551312uncharacterized LOC10255131264034487840350097Rat
7501955LOC102550954uncharacterized LOC10255095463925363339290633Rat
7500279LOC102552766uncharacterized LOC10255276665815077658186306Rat
7536096LOC102557053uncharacterized LOC10255705364204746342118475Rat
7502861LOC102555048uncharacterized LOC10255504864583490845923094Rat
7646071LOC102548253centrin-4-like67217718272181768Rat
7646365LOC102548461uncharacterized LOC10254846167227414272290681Rat
7647113LOC102552151uncharacterized LOC10255215167469182474698718Rat
7663848LOC10255564560S ribosomal protein L18a-like64854389348544447Rat
7652149LOC102555435uncharacterized LOC10255543566257374162579908Rat
7624969LOC102554460GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase-like67425915874260776Rat
7627887LOC102546496uncharacterized LOC10254649666690249166930836Rat
7629096LOC102547735uncharacterized LOC10254773567087483070899484Rat
7629645LOC102554202uncharacterized LOC10255420264194571541969352Rat
7630539LOC102551566uncharacterized LOC10255156665708443557089606Rat
7593102LOC102555380uncharacterized LOC10255538066252587262555470Rat
7619249LOC102546421uncharacterized LOC10254642166668963566699336Rat
7578757LOC102547890uncharacterized LOC10254789067182556671832386Rat
7561334LOC102548522uncharacterized LOC10254852267222721772231374Rat
7563724LOC102549100uncharacterized LOC10254910064990353049911102Rat
7751922LOC102551688uncharacterized LOC10255168867388432173909296Rat
7725900LOC102556158uncharacterized LOC10255615866503448965134280Rat
7690279LOC102554981uncharacterized LOC10255498164609135246111068Rat
7731406LOC102555986RNA-binding protein 34-like64115112341153682Rat
7734313LOC102554773uncharacterized LOC10255477365227207752308265Rat
7669283LOC102549779actin, cytoplasmic 2-like65472120154722310Rat
7719070LOC102547703uncharacterized LOC10254770364972940349759830Rat
7744426LOC102546497uncharacterized LOC10254649767326553073266513Rat
7747059LOC102555103uncharacterized LOC10255510364580665345830237Rat
7748644LOC102552092uncharacterized LOC10255209267399997874011751Rat
7709127LOC102547662uncharacterized LOC10254766267067789370687394Rat
7728058LOC102557478uncharacterized LOC10255747866844343768505774Rat
9129693LOC103692636uncharacterized LOC10369263667190298071916408Rat
9072809LOC103692621oligosaccharyltransferase complex subunit OSTC pseudogene66043133660453277Rat
9103871LOC103692605uncharacterized LOC10369260564190566341914487Rat
9159722LOC103695309glyceraldehyde-3-phosphate dehydrogenase pseudogene67706861277069628Rat
9167354LOC103695296glyceraldehyde-3-phosphate dehydrogenase pseudogene67232884872329825Rat
9352471LOC103692619uncharacterized LOC10369261966128222161329753Rat
9242302LOC103692643uncharacterized LOC10369264368237426182378710Rat
9288946LOC103692609serine palmitoyltransferase small subunit A pseudogene64781087547812735Rat
9299213LOC103692610coiled-coil-helix-coiled-coil-helix domain-containing protein 2, mitochondrial pseudogene65330935553311115Rat
9258221LOC103692640transcription elongation factor B polypeptide 1 pseudogene67517116175171726Rat
9263034LOC103692620thyroid hormone receptor-associated protein 3 pseudogene65483121154835676Rat
9422695LOC103692606uncharacterized LOC10369260664449376444498160Rat
9317184LOC103692627uncharacterized LOC10369262766260211862606902Rat
9329158LOC103692613NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5-like64193110841931448Rat
9392136LOC103692617transcription elongation factor B polypeptide 1 pseudogene65793654257936849Rat
9219694LOC103692628uncharacterized LOC10369262866696117167055411Rat
11370295LOC108351213uncharacterized LOC10835121364322425643252067Rat
11370304LOC108351238uncharacterized LOC10835123867371889173725872Rat
11449637LOC108351219uncharacterized LOC10835121964815399448168408Rat
11455066LOC108351364uncharacterized LOC10835136467812468678134031Rat
11468726LOC108351221uncharacterized LOC10835122164903314549287627Rat
11450428LOC108351230uncharacterized LOC10835123066260524662616196Rat
11440663LOC108351235tensin-2 pseudogene66959456869601783Rat
11452082LOC108351240uncharacterized LOC10835124067432347874333662Rat
11405764LOC108351234uncharacterized LOC10835123466898468968985303Rat
11406804LOC10835133160S ribosomal protein L24 pseudogene65027803950283600Rat
11384778LOC108351214uncharacterized LOC10835121464368784743709249Rat
11407073LOC108351229transformer-2 protein homolog alpha pseudogene66184100361841697Rat
11407553LOC108351362uncharacterized LOC10835136264456576444570039Rat
11398630LOC108351227uncharacterized LOC10835122765434308154383179Rat
11387951LOC108351366peptidyl-prolyl cis-trans isomerase A-like68281357082814071Rat
11378331LOC108351223uncharacterized LOC10835122365001440650029376Rat
11403672LOC108351228uncharacterized LOC10835122866052476360536010Rat
11382383LOC10835133240S ribosomal protein S26-like65298065552996561Rat
11518989LOC108351363uncharacterized LOC10835136365438326654384851Rat
11479069LOC108351226uncharacterized LOC10835122665362952753640141Rat
11491526LOC108351236uncharacterized LOC10835123667249434372522266Rat
11492151LOC108351220uncharacterized LOC10835122064816873748174227Rat
41379325LOC120103528glyceraldehyde-3-phosphate dehydrogenase-like66252479362525797Rat
41086662LOC120093253L-lactate dehydrogenase A chain-like67353767673538554Rat
41087372LOC120093280U6 spliceosomal RNA67723686577236971Rat
41111149LOC120093440small nucleolar RNA SNORA1767746342877463557Rat
41281687LOC120103534ADP-ribosylation factor-like protein 166895551168962169Rat
41088753LOC120103535uncharacterized LOC12010353566916814369174099Rat
41088761LOC120093243uncharacterized LOC12009324364240591042411124Rat
41278108LOC120093303U6 spliceosomal RNA67249442772494534Rat
41089517LOC120093205uncharacterized LOC12009320567006935370091813Rat
41114950LOC120093357U1 spliceosomal RNA67220306672203228Rat
41140941LOC120093313U1 spliceosomal RNA67221868472218847Rat
41169746LOC120103417peptidyl-prolyl cis-trans isomerase NIMA-interacting 4-like65064794850648344Rat
41252109LOC120103419uncharacterized LOC12010341965662851656640670Rat
41359618LOC120093501U4 spliceosomal RNA68280110282801218Rat
41384656LOC120093424small nucleolar RNA SNORA2/SNORA34 family67109002471090159Rat
41172264LOC120103531uncharacterized LOC12010353166668467466685883Rat
41254020LOC120093508U6 spliceosomal RNA67081389370813999Rat
41279995LOC120093283U6 spliceosomal RNA66060760760607713Rat
41387415LOC120093459small nucleolar RNA SNORA1764430255644302686Rat
41173563LOC120093276U6 spliceosomal RNA66175955261759658Rat
41209044LOC120103422heat shock protein HSP 90-beta-like67750202177511120Rat
41328288LOC120093502U4 spliceosomal RNA66469570864695834Rat
41119779LOC120093290U6 spliceosomal RNA64499053644990642Rat
41147221LOC120093246laminin subunit beta-4-like64769733747811453Rat
41210651LOC120093425small nucleolar RNA SNORA2164083772240837850Rat
41120331LOC120093256uncharacterized LOC12009325668331404683353136Rat
41148093LOC120093432U2 spliceosomal RNA67673093876731128Rat
41212191LOC120093497U4 spliceosomal RNA67169935171699530Rat
41212235LOC120093176ragulator complex protein LAMTOR4-like64094746740956705Rat
41262445LOC120093439small nucleolar RNA SNORA1764494854344948677Rat
41331265LOC120093252L-lactate dehydrogenase A chain-like67352805573528933Rat
41153839LOC120093240uncharacterized LOC12009324064137743241380036Rat
41178284LOC120093293U6 spliceosomal RNA64520744745207550Rat
41263556LOC120093490U2 spliceosomal RNA65662950456629658Rat
41264357LOC120093466small nucleolar RNA SNORA1764468879444688925Rat
41343341LOC120093379U1 spliceosomal RNA67170661771706776Rat
41392365LOC120093451small nucleolar RNA SNORA1765658492756585050Rat
41393512LOC120093467small nucleolar RNA SNORA1767401621574016333Rat
41155361LOC12010353760S ribosomal protein L10a-like67277685272778065Rat
41155391LOC120093489U2 spliceosomal RNA67521655975216724Rat
41179368LOC120093436small nucleolar RNA SNORA1768277764282777773Rat
41344174LOC120093495U4 spliceosomal RNA64895729148957480Rat
41367672LOC120093335U1 spliceosomal RNA67222704472227207Rat
41156721LOC120093430small nucleolar RNA SNORA4868340667483406809Rat
41192509LOC120093462small nucleolar RNA SNORA1766219361062193737Rat
41216074LOC12010341660S ribosomal protein L22-like 165002995150032039Rat
41266620LOC120093480U6atac minor spliceosomal RNA64960520949605327Rat
41370298LOC120103423inorganic pyrophosphatase 2, mitochondrial-like67985657179860348Rat
41101643LOC120103522glyceraldehyde-3-phosphate dehydrogenase-like65268183352686334Rat
41157524LOC120103524uncharacterized LOC12010352465595678756049486Rat
41158901LOC120103521uncharacterized LOC12010352164878218648787040Rat
41194156LOC120093239high mobility group protein B3-like64104322541044515Rat
41194368LOC120093500U4 spliceosomal RNA68086314280863276Rat
41268372LOC120093449small nucleolar RNA SNORA1766285928762859414Rat
41268906LOC120103525uncharacterized LOC12010352565940358259425212Rat
41346264LOC120093242uncharacterized LOC12009324264226566942283040Rat
41372374LOC120093491U2 spliceosomal RNA66251956662519704Rat
41103385LOC120093278U6 spliceosomal RNA67006837370068479Rat
41195602LOC120093317small nucleolar RNA SNORA73 family66305535063055553Rat
41195695LOC120093493small nucleolar RNA U365380824353808325Rat
41195836LOC120093301U6 spliceosomal RNA67217547672175575Rat
41218949LOC120093421small nucleolar RNA SNORA42/SNORA80 family64033114340331276Rat
41292080LOC120093255uncharacterized LOC12009325568324727683249845Rat
41071680LOC120103523uncharacterized LOC12010352365274945052765273Rat
41104462LOC120093244uncharacterized LOC12009324465074508650754911Rat
41104710LOC120093481small nucleolar RNA SNORD12768310859683108680Rat
41186807LOC120093447small nucleolar RNA SNORA1765009137850091506Rat
41197514LOC1200932755S ribosomal RNA64092292240923040Rat
41220337LOC120093245uncharacterized LOC12009324565202036452038707Rat
41271388LOC120093314U6 spliceosomal RNA67757123077571335Rat
41293354LOC120103536uncharacterized LOC12010353666919891369201280Rat
41293789NEWGENE_40934091transfer RNA alanine (anticodon AGC)67169429071694370Rat
41350299LOC120093284U6 spliceosomal RNA66862788368627990Rat
41273085LOC120103519uncharacterized LOC12010351964718482147207414Rat
41081960LOC120103540uncharacterized LOC12010354067588474075910540Rat
41082662LOC120093281U6 spliceosomal RNA64072761140727717Rat
41200290LOC120093485U2 spliceosomal RNA66451313164513345Rat
41110432LOC120093177protein max-like65294876252950726Rat
41165480LOC120093298U6 spliceosomal RNA65422698154227085Rat
41201218LOC120093249coiled-coil domain-containing protein 69-like64954363749544171Rat
40944820LOC120093433small nucleolar RNA SNORA4864941353149413674Rat
40945147LOC120093279U6 spliceosomal RNA67006906070069166Rat
40971021LOC120093210uncharacterized LOC12009321067230649372316083Rat
40997044LOC120093455small nucleolar RNA SNORA1766684549766845624Rat
40947446LOC120093250uncharacterized LOC12009325066474904964779502Rat
40972876LOC12009324760S ribosomal protein L29-like65688837256888994Rat
40950765LOC120093319U7 small nuclear RNA66238648762386545Rat
40951447LOC120103529uncharacterized LOC12010352966495868964973053Rat
40977559LOC120093438small nucleolar RNA SNORA1764762512447625256Rat
41012694LOC120103520uncharacterized LOC12010352064813883748147092Rat
40978870LOC120093300U6 spliceosomal RNA67775521977755326Rat
40979901LOC12009323860S ribosomal protein L35-like64042359440425165Rat
40998590LOC120093311U6 spliceosomal RNA67990149179901594Rat
40999746LOC120093201uncharacterized LOC12009320165753973457559955Rat
40930221LOC120093209uncharacterized LOC12009320967222237272224518Rat
40957535LOC120093486U2 spliceosomal RNA68021546380215666Rat
40932412LOC120093236uncharacterized LOC12009323663918573239186930Rat
40958936LOC120093448small nucleolar RNA SNORA1768351670483516832Rat
41003040LOC120103526uncharacterized LOC12010352666127517661282214Rat
41004139LOC120093468small nucleolar RNA SNORA1766583512565835255Rat
40934694LOC120093461small nucleolar RNA SNORA1765839618358396315Rat
40986010LOC120093463small nucleolar RNA SNORA1765311671453116830Rat
41007282LOC120093241ubiquinol-cytochrome-c reductase complex assembly factor 3-like64172531141725677Rat
40936444LOC120103527uncharacterized LOC12010352766199587361997541Rat
40963012LOC120093310U6 spliceosomal RNA67480579574805882Rat
41008057LOC120093202uncharacterized LOC12009320265750914557509600Rat
41008171LOC120093401U1 spliceosomal RNA67832489078325029Rat
40964578LOC120093123heterogeneous nuclear ribonucleoprotein A1-like65369794153700119Rat
41010064LOC120093251uncharacterized LOC12009325166856912168571922Rat
40966473LOC120093437small nucleolar RNA SNORA1765161246051612591Rat
40967547LOC120093292U6 spliceosomal RNA67335971173359813Rat
40943757LOC120093254uncharacterized LOC12009325467632738976335466Rat
41074541LOC120093346U1 spliceosomal RNA67220576072205923Rat
41075203LOC120103538uncharacterized LOC12010353867376066973766166Rat
41242542LOC120093208uncharacterized LOC12009320867220307572211594Rat
41312804LOC12010341860S acidic ribosomal protein P0-like65568605455686977Rat
41025079LOC120093443U2 spliceosomal RNA65660011356600288Rat
41076279LOC120103533uncharacterized LOC12010353366885816468862838Rat
41245801LOC120093302U1 spliceosomal RNA67221144572211608Rat
41050981LOC120093454U2 spliceosomal RNA67649533176495501Rat
41134593LOC120093452small nucleolar RNA SNORA1765017897850179105Rat
41319468LOC120093324U1 spliceosomal RNA67222436972224532Rat
41029885LOC120093291U1 spliceosomal RNA67219467172194834Rat
41135267LOC120093458small nucleolar RNA SNORA1766688136966881496Rat
41143542LOC120093248meteorin-like protein64954253649543619Rat
41144192LOC120093207uncharacterized LOC12009320767220596872207464Rat
41339141LOC120093204uncharacterized LOC12009320465819694858227730Rat
41144586LOC120093200uncharacterized LOC12009320064822301948238183Rat
41257709LOC120103532uncharacterized LOC12010353266779498267868731Rat
41335350LOC120093450small nucleolar RNA SNORA1767371998573720115Rat
41057606LOC120103530uncharacterized LOC12010353066546133865583973Rat
41059091LOC120103541uncharacterized LOC12010354167940880279466213Rat
41299246NEWGENE_40933816transfer RNA valine (anticodon AAC)64041593840416018Rat
41314300LOC120093237prothymosin alpha-like64042091940423313Rat
41033385LOC120093510U6 spliceosomal RNA67563707175637177Rat
41059523LOC120093435small nucleolar RNA SNORA4865307013453070273Rat
41060377LOC120103415protein HEXIM2-like64954466449545948Rat
41034983LOC120093442small nucleolar RNA SNORA1765639963256399763Rat
41035462LOC120093477small nucleolar RNA SNORA2667682355176823672Rat
41334056LOC120093203uncharacterized LOC12009320365841472558430740Rat
41227971LOC120093434small nucleolar RNA SNORA4867210130272101443Rat
41302933LOC120103420glyceraldehyde-3-phosphate dehydrogenase-like66739692267441051Rat
41303109LOC120093206uncharacterized LOC12009320667220087072202818Rat
41016925LOC120093492small nucleolar RNA U367965620179656389Rat
41040147LOC120093315U6 spliceosomal RNA64090153440901635Rat
41305281NEWGENE_40933816transfer RNA valine (anticodon AAC)67469405574694135Rat
41067375LOC120103421PRELI domain-containing protein 1, mitochondrial-like67661641576617250Rat
41021534LOC120093368U1 spliceosomal RNA64866660248666749Rat
41044899LOC120103539uncharacterized LOC12010353967465429674666802Rat
41023230LOC120093444small nucleolar RNA SNORA1768369407183694202Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
11141D6Arb1230364865776548658068Ratregion
11241D6Mit311767222752472227641Ratregion
11241D6Mit311767220263272202749Ratregion
11242D6Arb1738967222725172227640Ratregion
11242D6Arb1738967220263372203021Ratregion
33977D6Mit424065773029457730540Ratregion
33993D6Mit215768113288981133036Ratregion
34072D6Mgh717764579008845790265Ratregion
34306D6Mgh510467346336373463459Ratregion
11347D6Wox1824267583645575836697Ratregion
37222D6Rat8221964298481642985033Ratregion
37392D6Rat9323064343264943432879Ratregion
35338D6Rat3116264234207842342232Ratregion
36813D6Rat2017667877764178777799Ratregion
36856D6Rat4914067450824774508389Ratregion
37662D6Rat9224563967147639671747Ratregion
37704D6Rat5817865778652357786753Ratregion
37704D6Rat5817865778652357786723Ratregion
37876D6Rat5921268231684282317040Ratregion
36534D6Rat3217264164972641649891Ratregion
36560D6Rat3415063971455039714722Ratregion
36586D6Rat2614065464100154641141Ratregion
36648D7Rat3817465907619559076366Ratregion
36729D6Rat2313967163626671636405Ratregion
35036D6Rat2412566148089561481017Ratregion
35140D6Rat2210867259359672593685Ratregion
35583D6Rat5015066128390461284075Ratregion
35603D6Rat2117567462775574627930Ratregion
35727D6Rat1916067862976478629902Ratregion
35943D6Rat3013264737056447370696Ratregion
39972D6Rat13222165081844550818672Ratregion
38080D6Rat9513165289524052895390Ratregion
38220D6Rat6721364255907842559313Ratregion
38392D6Rat8524567519593275196177Ratregion
38608D6Rat10614266553155565531697Ratregion
38758D6Rat8313664025737440257518Ratregion
40044D6Rat15414866261353562613667Ratregion
40240D6Rat13313764887386348873992Ratregion
38930D6Rat6124564257507842575327Ratregion
38978D6Rat9820167692266376922872Ratregion
39022D6Rat6022565197672351976936Ratregion
39132D6Rat7023967911773079117991Ratregion
39232D6Rat9914065652904456529174Ratregion
39340D6Rat7320066944906769449277Ratregion
39450D6Rat13824964054393340544194Ratregion
42781D6Rat20720964156247541562698Ratregion
42782D6Rat20620564747401347474227Ratregion
42783D6Rat20514965391391853914055Ratregion
42784D6Rat20124366435743064357671Ratregion
42785D6Rat16816965617434056174415Ratregion
42786D6Rat16920266304036063040562Ratregion
42787D6Rat20211765901136759011478Ratregion
42788D6Rat20423866136247361362692Ratregion
42791D6Rat19810366725990067259987Ratregion
42792D6Rat19922366977486069775071Ratregion
42793D6Rat16724967877760178777825Ratregion
41244D6Rat13515164780750247807653Ratregion
41416D6Rat12615767710214877102317Ratregion
42325D6Rat22123266522321465223444Ratregion
42326D6Rat22024767253822172538452Ratregion
40770D6Rat13923163963405339634300Ratregion
40770D6Rat13923163963395539634300Ratregion
40872D6Rat12820567369199973692206Ratregion
41052D6Rat12920067346328573463477Ratregion
41064D6Rat13419964770999047710185Ratregion
41068D6Rat12724667435695874357208Ratregion
41548D6Rat13016066911642069116571Ratregion
41608D6Rat14227364191223241912500Ratregion
41668D6Rat17022864554687545547114Ratregion
44074D6Got5413764236768142367818Ratregion
44075D6Got5822064343660243436822Ratregion
44076D6Got5517364513215845132331Ratregion
44077D6Got6029664905541549055711Ratregion
44078D6Got6619664982631849826514Ratregion
44079D6Got6423765019586850196103Ratregion
44080D6Got618664931999349320076Ratregion
44081D6Got6318165065626050656438Ratregion
44082D6Got6513565081852050818655Ratregion
44083D6Got6825965133459251334851Ratregion
44084D6Got6217565271828052718455Ratregion
44086D6Got6917665209418652094362Ratregion
44087D6Got6713365212784352127976Ratregion
44089D6Got7011665522499255225108Ratregion
44090D6Got7212665681194256812068Ratregion
44091D6Got7412165813703458137155Ratregion
44092D6Got7324165775583657756077Ratregion
44094D6Got7627166370286263703133Ratregion
44095D6Got7718266226831862268500Ratregion
44096D6Got8019666618874866188944Ratregion
44097D6Got7926866803086568031246Ratregion
44097D6Got7926866803086568031133Ratregion
44098D6Got8212466838305268383176Ratregion
44099D6Got8116266856820268568366Ratregion
44100D6Got9022767027725770277484Ratregion
44102D6Got8620667228099372281199Ratregion
44103D6Got9122267033069070330909Ratregion
44105D6Got8810767068487670684985Ratregion
44106D6Got8715467156001271560166Ratregion
44108D6Got8515167275125872751411Ratregion
44109D6Wox319767332477173324942Ratregion
44110D6Got9620067489842074898620Ratregion
44111D6Got9724867452093474521182Ratregion
44113D6Got9317067564335975643529Ratregion
44116D6Got9215767564336975643524Ratregion
44119D6Got10715368202123882021389Ratregion
44120D6Got10926368316174783162010Ratregion
44121D6Got10820168348890783489108Ratregion
44124D6Got10522568309903183099256Ratregion
44066D6Got4822663999081339991039Ratregion
44067D6Got4911864058269140582809Ratregion
44068D6Got5016164083215440832315Ratregion
44069D6Got5220864098285640983064Ratregion
44070D6Got19923264107509741075329Ratregion
44073D6Got5729464413207044132364Ratregion
60540D6Got4423763952980639530031Ratregion
60542D6Got4620463957175439571957Ratregion
60544D6Got5124264174835841748602Ratregion
60545D6Got5624064229693942297179Ratregion
60546D6Got5919964234734642347545Ratregion
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60501D6Got10614568349991783500060Ratregion
60429D4Got14714664995905149959119Ratregion
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62501D6Uia335064485714644857495Ratregion
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67223D6Arb1111265485613254856244Ratregion
67226D6Arb1667399734773997655Ratregion
67277D6Arb836064033503740335394Ratregion
1631403D6Got31618364456250144562684Ratregion
1627862D6Got31212067188538371885503Ratregion
1628178D6Got31811865371753653717654Ratregion
1628556D6Got31018067951600179516176Ratregion
1629633D6Got30911064236533342365443Ratregion
1639193D6Wox247564033516540335238Ratregion
1639610D6Got30325764337873943378996Ratregion
1633389D6Got31122867260463272604860Ratregion
1639852D6Wox3121567400004474000263Ratregion
1635082D6Wox2667399740873997656Ratregion
1635844D6Wox198967583695975837048Ratregion
1637121D6Wox2815967400010074000263Ratregion
1638211D6Wox3618767061943170619618Ratregion
1634725D6Got32126268342538383425649Ratregion
7205820fc03d10.x1067877245378773424Ratregion
7205820fc03d10.x1067877241378773424Ratregion
7193004Etv149165559124855591739Ratregion
7193005Foxg139666667626366676659Ratregion
7206372Nkx2-1101667399847973999495Ratregion
7206482Nkx2-143467399778573998219Ratregion
5036137D10Bir5067418796774188043Ratregion
5036187RH12584224565012497850125223Ratregion
5038836RH12736018664008066640081020Ratregion
7206578UniSTS:5471496064400887344008933Ratregion
5039158RH12754520665539685255397058Ratregion
5036454Prkcm20666772579967726005Ratregion
5036498Smstr113667583418975834325Ratregion
5036504Sox1173464400754844008282Ratregion
5037143RH7069815164087406240874213Ratregion
5035522NFKBIA17267285973472859906Ratregion
5035677HSCZSD08220864656401446564222Ratregion
5033937RH14068019565223574352235938Ratregion
7206238Mbip7467381683873816912Ratregion
7206240Nkx2-1132467399976074001088Ratregion
5031372PMC152658P184867285974472860592Ratregion
5034043RH141145064289992542900140Ratregion
5034067RH14123518167399594273996123Ratregion
5034161RH14160018466938647869386662Ratregion
5028883RH14268818866668877666688964Ratregion
5026278RH13159921567141037671410591Ratregion
5028985RH14307530064082545940825759Ratregion
5029041RH14329010167263265572632756Ratregion
5031698AU04744818367030784470308027Ratregion
5031748AU04728215767308387773084032Ratregion
5034379STS-N3438912164807132948071450Ratregion
5029079RH14343720567475416874754373Ratregion
5029197RH14388517864129711441297292Ratregion
5026690RH13316321864039080040391018Ratregion
5026716RH13326021667674114376741359Ratregion
5029341RH14442715766885837068858527Ratregion
5029395RH14462817164532284645323017Ratregion
5032054AU04682410163910106339101164Ratregion
5026882RH13389018967672095976721149Ratregion
5029427Twist34065067541550675755Ratregion
5032229Y1257712465708225357082377Ratregion
5032327Etv178765567654255677329Ratregion
5029581BE10124617264308375943083931Ratregion
5029649BI27753818365294773952948041Ratregion
5029669BF38684316465095367250953836Ratregion
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5503500Cyp5131767672702176727338Ratregion
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5505412Ndufa1090065988017459881074Ratregion
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5506086Myt1l064656094346561525Ratregion
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5499627MARC_4117-4118:991938388:111164854418148544292Ratregion
5499671MARC_7327-7328:992008337:162265559120955591831Ratregion
5500113UniSTS:23682813764789941447899551Ratregion
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5502186MARC_7649-7650:996688053:1066960056669600797Ratregion
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5503538NOVA1__606561366378348363784096Ratregion
5503778UniSTS:47067645764707231447072784Ratregion
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5501820MARC_13945-13946:1007583817:174764975993649760683Ratregion
5502909Nkx2-143267399778773998219Ratregion
5507147UniSTS:22484115466772574767725901Ratregion
5502871Foxa192267513108875132010Ratregion
Position Markers

Peak: (D6Rat50)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2661,283,904 - 61,284,075 (+)MAPPER
Rnor_6.0664,178,961 - 64,179,131NCBI
Rnor_5.0673,767,746 - 73,767,916UniSTS
RGSC_v3.4663,596,086 - 63,596,256UniSTS
RGSC_v3.4663,596,060 - 63,596,414RGD
RGSC_v3.1663,599,212 - 63,599,382RGD
Celera660,280,253 - 60,280,423UniSTS
RH 3.4 Map6441.0RGD
RH 3.4 Map6441.0UniSTS
RH 2.0 Map6617.4RGD
FHH x ACI Map652.5699RGD


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1598843Cm63Cardiac mass QTL 632.6heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)6139036266Rat
7411603Foco13Food consumption QTL 135.50.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)6141223769Rat
8552962Pigfal16Plasma insulin-like growth factor 1 level QTL 169.4blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)6141223769Rat
7411542Bw127Body weight QTL 1275.50.001body mass (VT:0001259)body weight gain (CMO:0000420)6141223769Rat
9589129Insul24Insulin level QTL 2419.060.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)6141223769Rat
9589048Scfw3Subcutaneous fat weight QTL 34.570.001subcutaneous adipose mass (VT:1000472)abdominal subcutaneous fat pad weight (CMO:0002069)6141223769Rat
2293709Bss23Bone structure and strength QTL 235.180.0001femur morphology trait (VT:0000559)femur cross-sectional area (CMO:0001661)6142487980Rat
2293650Bss31Bone structure and strength QTL 315.050.0001femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)6142487980Rat
2293656Bss28Bone structure and strength QTL 286.790.0001femur morphology trait (VT:0000559)femur midshaft cortical cross-sectional area (CMO:0001663)6142487980Rat
7411584Foco4Food consumption QTL 44.30.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)6142838846Rat
738024Sach5Saccharine consumption QTL 53.90.00039consumption behavior trait (VT:0002069)saccharin intake volume to total fluid intake volume ratio (CMO:0001601)6143394190Rat
2301972Bp325Blood pressure QTL 3254.8arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)6172227641Rat
1300164Rf15Renal function QTL 153.12renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)6507449754641141Rat
4145119Mcs25Mammary carcinoma susceptibility QTL 250.0001mammary gland integrity trait (VT:0010552)ratio of deaths to total study population during a period of time (CMO:0001023)610894415110548006Rat
1578665Bss16Bone structure and strength QTL 164.4femur morphology trait (VT:0000559)bone trabecular cross-sectional area (CMO:0002311)61173566972593685Rat
1578668Bmd14Bone mineral density QTL 143.8femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)61173566972593685Rat
10401812Kidm54Kidney mass QTL 54kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)61436878859368788Rat
10401800Kidm49Kidney mass QTL 49kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)61436878859368788Rat
1576309Emca7Estrogen-induced mammary cancer QTL 74mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)615107216107351382Rat
2292589Emca10Estrogen-induced mammary cancer QTL 100.048mammary gland integrity trait (VT:0010552)post-insult time to mammary tumor formation (CMO:0000345)61653614061536140Rat
1354664Slep2Serum leptin concentration QTL 24.49blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)61653614071636405Rat
1641898Colcr4Colorectal carcinoma resistance QTL43.710.0007intestine integrity trait (VT:0010554)well differentiated malignant colorectal tumor surface area measurement (CMO:0002077)62033877762613667Rat
2293839Kiddil2Kidney dilation QTL 24.8kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)62086642281133036Rat
2293841Kiddil4Kidney dilation QTL 44.4kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)62086642281133036Rat
1331779Rf38Renal function QTL 382.876kidney blood vessel physiology trait (VT:0100012)absolute change in renal vascular resistance (CMO:0001900)63207442872227641Rat
634318Bw118Body weight QTL 1183.55abdominal fat pad mass (VT:1000711)abdominal fat pad weight (CMO:0000088)63330954957730294Rat
6893340Cm77Cardiac mass QTL 770.260.57heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)63330954981132889Rat
1300143Rf14Renal function QTL 142.92renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)63443413777102317Rat
1354632Scl29Serum cholesterol level QTL 293.74blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)63509870971636405Rat
634307Bp141Blood pressure QTL 1414arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)63523041780230417Rat
70199Coreg1Compensatory renal growth QTL 111.8kidney mass (VT:0002707)compensatory renal growth score (CMO:0001894)63569161857730540Rat
9590290Uminl2Urine mineral level QTL 23.960.001urine mineral amount (VT:0015086)urine electrolyte level (CMO:0000593)63878398983783989Rat
9590306Scort18Serum corticosterone level QTL 182.880.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)63878398983783989Rat
9590140Scort4Serum corticosterone level QTL 414.490.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)63878398983783989Rat
634330Pia16Pristane induced arthritis QTL 163.9joint integrity trait (VT:0010548)arthritic paw count (CMO:0001460)645790088104200226Rat
4889848Pur25Proteinuria QTL 25140.003total urine protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)65672856290198260Rat
6893332Cm74Cardiac mass QTL 740.40.64heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)657730540104085867Rat
1558641Cm47Cardiac mass QTL 472.90.001heart mass (VT:0007028)heart wet weight (CMO:0000069)657730540104085867Rat
70176Mcsm1Mammary carcinoma susceptibility modifier QTL 1mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)658632962103632962Rat
12801471Schws9Schwannoma susceptibility QTL 9nervous system integrity trait (VT:0010566)percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)661747639106747639Rat
2293088Iddm28Insulin dependent diabetes mellitus QTL 285.21blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)66304056271636266Rat
731173Uae22Urinary albumin excretion QTL 2210.1urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)665531555140994061Rat
2290393Uae37Urinary albumin excretion QTL 370.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)665531555140994061Rat
1641904Alcrsp4Alcohol response QTL 4response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)667262953112262953Rat
1300075Glom7Glomerulus QTL 75.60.0000002kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)671201409116201409Rat
1331789Rf37Renal function QTL 373.224kidney blood vessel physiology trait (VT:0100012)absolute change in renal vascular resistance (CMO:0001900)672202632115200186Rat
70196BpQTLcluster7Blood pressure QTL cluster 76.82arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)672202632117202632Rat
724536Uae7Urinary albumin excretion QTL 73.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)672202632130729475Rat
1331799Bp211Blood pressure QTL 2113.66407arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)672202632130919985Rat
2301964Bp323Blood pressure QTL 3234.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)67222764181132889Rat
1581550Pur8Proteinuria QTL 8total urine protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)672227641130729205Rat
1581563Uae33Urinary albumin excretion QTL 33urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)672227641130729205Rat
724524Uae2Urinary albumin excretion QTL 22.70.0005urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)673463459109394713Rat
2293837Kiddil1Kidney dilation QTL 13.7kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)681132889104393926Rat
2293842Kiddil3Kidney dilation QTL 34.3kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)681132889104393926Rat
737827Hcar11Hepatocarcinoma resistance QTL 114.4liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)682523650110548006Rat
1576302Schws4Schwannoma susceptibility QTL 40.0078nervous system integrity trait (VT:0010566)percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)683190345106747639Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_general confidence interval 77.7-84.2 Mb 8694157
qtl_general number of animals used: 93 F2 males and 94 F2 females 8694157
qtl_general measurement method: blood samples were taken in the morning and collected on EDTA, centrifuged at 4000g for 10 min to extract the plasma, plasma corticosterone was measured with an in-house RIA kit using an anti-Cort antibody 8694157
qtl_general software package used: MultiQTL software 8694157