D6Rat167 Marker Search Result - Rat Genome Database

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Marker: D6Rat167

Symbol: D6Rat167
Previously known as: oxsts11230; R0293-C06; 
RGD ID: 42793
Expected Size: 224 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr8684,512,696 - 84,512,920 (+)Marker Load Pipeline
mRatBN7.2678,777,601 - 78,777,825 (+)MAPPERmRatBN7.2
Rnor_6.0682,312,486 - 82,312,709NCBIRnor6.0
Rnor_5.0691,837,224 - 91,837,447UniSTSRnor5.0
RGSC_v3.4681,833,438 - 81,833,661UniSTSRGSC3.4
Celera677,446,333 - 77,446,556UniSTS
RH 3.4 Map6571.9RGD
RH 3.4 Map6571.9UniSTS
RH 2.0 Map6802.9RGD
SHRSP x BN Map652.2598RGD




#
Reference Title
Reference Citation
1. Data downloaded from Wellcome Trust, University of Oxford Data downloaded from Wellcome Trust, University of Oxford
2. High-density rat radiation hybrid maps containing over 24,000 SSLPs, genes, and ESTs provide a direct link to the rat genome sequence. Kwitek AE, etal., Genome Res. 2004 Apr;14(4):750-7
3. Rat Genetic Map Data Rat Genetic Map Data, Whitehead Institute for Biomedical Research/MIT Center for Genome Research Website, http://waldo.wi.mit.edu/rat/public/distribution/rat_sslp_releases/jan00/
4. Electronic Transfer of SSLP Data Rat Genetic Mapping Project, Whitehead Institute for Biomedical Research. APR. 2001.
5. UniSTS Pipeline RGD automated pipelines
6. RH Map Project RH Map Project, Laboratory of Genetic Research Website, 1-JUL-99, Laboratory of Genetic Research, Medical College of Wisconsin, http://www.lgr.mcw.edu/LGR/
7. A high density integrated genetic linkage and radiation hybrid map of the laboratory rat Steen RG, Kwitek-Black AE, etal., Genome Research, 1999, 6:1-8


 
Forward Primer TCCCTTCTGACTCCCACTGT
Reverse Primer TGGACAGTCCATCCCATAGA
 
Template 
ATTTTTTCCAGTGTCCTCTATCCCTTCTGACTCCCACTGTTAAGTCTCAAACACAATGTCAAAT
GGCTGAAGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTGGGGGGTGGTAT
TTAACATATTAAAGACATCACATGGTTACCAGTTTGCTTCCTGAGGAACCTACTTATTTACCTT
ACTGTTACAGGGTATGGCCTGACATACCCAATTCCCCTACCCAAAACTTGCTACAAATCTATGG
GATGGACTGTCCATGGGCCAAAATCTTACACCATTGTTGNTTAGATTCCTTTCTTTTTTAACAT
TTATTTATTGNCAGGGGTGGGGATGGNCAGTCCAGAGGGGAGNTTCGTCCAGGGTTATGTATGA
GGAAACACCCACCATGAGCCAAAAGCAAGTTGGGGTGGAAAAGGCTTATTTGGNTTACACTTCN
ACATCATAGTCCATCGTGGAAAGAAGTCGGGACAGGAACTCAATTAATCAGGGCAGGAACTTGG
AGGCAGGAACTGATACAGAAGCAGGGGGTACCGATCTCGAATTCGTAATCATGGTNATAGCTGT
TTCCGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGNCGGAAGCATAAGTGTA
NGCCTGGGGTGCCTAATGAGTGAGCTAACNCACATTAATTGCGTTGGCNCACTGTNCGCTTTCA
GTCGGGAAACTGTCGTGCNANTGCATATGAATCGGNCAACGCGCGNNGAGANGGNTTTGNGTAT
TGGGCNCCANGTNGTTTTCNTTCANAGGGNNGCNNGNGATTGNCTTNANGCCGGNNNNNAANTN
AGCNNGNCAGTGGTTNCCCANANGGAA


GenBank Nucleotide CH473947 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000236 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


1 to 10 of 27 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
9590290Uminl2Urine mineral level QTL 23.960.001urine mineral amount (VT:0015086)urine electrolyte level (CMO:0000593)63878398983783989Rat
1331799Bp211Blood pressure QTL 2113.66407arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)672202632130919985Rat
634307Bp141Blood pressure QTL 1414arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)63523041780230417Rat
634330Pia16Pristane induced arthritis QTL 163.9joint integrity trait (VT:0010548)arthritic paw count (CMO:0001460)645790088104200226Rat
1331789Rf37Renal function QTL 373.224kidney blood vessel physiology trait (VT:0100012)absolute change in renal vascular resistance (CMO:0001900)672202632115200186Rat
4145119Mcs25Mammary carcinoma susceptibility QTL 250.0001mammary gland integrity trait (VT:0010552)ratio of deaths to total study population during a period of time (CMO:0001023)610894415110548006Rat
70176Mcsm1Mammary carcinoma susceptibility modifier QTL 1mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)658632962103632962Rat
1581563Uae33Urinary albumin excretion QTL 33urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)672227641130729205Rat
1558641Cm47Cardiac mass QTL 472.90.001heart mass (VT:0007028)heart wet weight (CMO:0000069)657730540104085867Rat
724524Uae2Urinary albumin excretion QTL 22.70.0005urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)673463459109394713Rat

1 to 10 of 27 rows