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Gene: Sec23a (Sec23 homolog A, COPII coat complex component) Rattus norvegicus
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Symbol: Sec23a
Name: Sec23 homolog A, COPII coat complex component
Description: Predicted to have GTPase activator activity and zinc ion binding activity. Predicted to be involved in COPII-coated vesicle cargo loading and protein localization to plasma membrane. Predicted to localize to several cellular components, including the bounding membrane of organelle; endoplasmic reticulum exit site; and perinuclear region of cytoplasm. Human ortholog(s) of this gene implicated in craniolenticulosutural dysplasia. Orthologous to human SEC23A (Sec23 homolog A, COPII coat complex component); PARTICIPATES IN Endoplasmic Reticulum-associated degradation pathway; INTERACTS WITH 17alpha-ethynylestradiol; 2,4-dibromophenyl 2,4,5-tribromophenyl ether; 2,6-dinitrotoluene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: protein transport protein Sec23A; SEC23 homolog A; Sec23 homolog A (S. cerevisiae); Sec23 homolog A, coat complex II component; SEC23A (S. cerevisiae)
Orthologs:
Homo sapiens (human) : SEC23A (Sec23 homolog A, COPII coat complex component)  HGNC  Alliance
Mus musculus (house mouse) : Sec23a (SEC23 homolog A, COPII coat complex component)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Sec23a (Sec23 homolog A, coat complex II component)
Pan paniscus (bonobo/pygmy chimpanzee) : SEC23A (Sec23 homolog A, coat complex II component)
Canis lupus familiaris (dog) : SEC23A (Sec23 homolog A, COPII coat complex component)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Sec23a (Sec23 homolog A, coat complex II component)
Sus scrofa (pig) : SEC23A (Sec23 homolog A, COPII coat complex component)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0680,059,742 - 80,107,340 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl680,060,916 - 80,107,236 (-)Ensembl
Rnor_5.0689,585,614 - 89,633,225 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4679,660,575 - 79,706,898 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1679,661,840 - 79,704,989 (-)NCBI
Celera675,420,329 - 75,466,292 (-)NCBICelera
Cytogenetic Map6q23NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Sec23a
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1309103
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.