D6Rat206 Marker Search Result - Rat Genome Database
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Marker: D6Rat206

Symbol: D6Rat206
Also known as: R0332-C05; oxsts11268; 
RGD ID: 42782
Expected Size: 205 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_6.0649,802,784 - 49,802,997NCBIRnor6.0
Rnor_5.0658,482,706 - 58,482,919UniSTSRnor5.0
RGSC_v3.4648,750,725 - 48,750,940RGDRGSC3.4
RGSC_v3.4648,750,726 - 48,750,939UniSTSRGSC3.4
RGSC_v3.1648,753,593 - 48,754,093RGD
Celera646,679,126 - 46,679,339UniSTS
SHRSP x BN Map634.1598UniSTS
SHRSP x BN Map634.1598RGD


Annotation



Strains and Sequence

Sequence
 
Forward Primer CAGACTGCAGCAAGGTACCA
Reverse Primer AGACCTTGTGGAGCCTCAGT
 
Template
GAGGATCCCCCTCTGTGTGAATTTCTAAGTCTTACCTTCAGAAGCAGTACCAGGTAGACATGAA
AATACTGTCACTCTCTCAAATCATGTAATATTTCTGTTTGACTTGACATATGCAGAGAGTCTCT
GTTTCAGCATAAGACATGCTAGCAGGCTTAAAAATACTGTTTCTGGNTGCTAAATCCTGAATCT
ACAAATGTGGGATCAATGATGTGAAAAGAGAAACTAAATGATGTGTGGAAGTTTATCAACTCAC
AGTGACAAGAAGCAGACTGCAGCAAGGTACCACACATTCAGGAAGTGAATGACTCCTTAAGTTA
TTCTCCTATAGAAATGCACACACACACACACACACACACACACACACACACACACACACACATA
CACACACACCATGAGATCTATAAGCCATGAATGTTTATGCTCTAGATACAAGAAAAGGGATGGA
ATATTACTGAGGCTCCACAAGGTCTAATCACCNTTTCTTCGGAAGAGGGGTACGAGCTCNATTC
GTAATCTGGTCTAGCGTTTCCGTGTGAAATTGTTATCCGCCACATTCCACCACTAGAGCCGGAG
CTAAGTGNNAGCCGGGGTGCNNTGGTGGCANTCCTTATTGGTTGGCCATGCCGTTTCGTCGGAA
CTGTGTGNAGTGCTTATGATCGCNGGGGGNGGTGNTTNNGNGGGGNNCTTTCANGGNNGGGNNN
TGTGCTCNGNGGCCGGGGTGNNA

Region



QTLs in Region (Rnor_6.0)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2301972Bp325Blood pressure QTL 3254.8arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)6175623393Rat
1354664Slep2Serum leptin concentration QTL 24.49blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)6112039375023446Rat
1576309Emca7Estrogen-induced mammary cancer QTL 74mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)62537030111715717Rat
1578665Bss16Bone structure and strength QTL 164.4femur morphology trait (VT:0000559)bone trabecular cross-sectional area (CMO:0002311)6616172276002731Rat
1578668Bmd14Bone mineral density QTL 143.8femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)6616172276002731Rat
4145119Mcs25Mammary carcinoma susceptibility QTL 250.0001mammary gland integrity trait (VT:0010552)ratio of deaths to total study population during a period of time (CMO:0001023)67009971115379601Rat
634322Bw12Body weight QTL 120body mass (VT:0001259)body weight (CMO:0000012)71017386255173862Rat
1300164Rf15Renal function QTL 153.12renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)61312295857516539Rat
10401812Kidm54Kidney mass QTL 54kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)61681010761810107Rat
10401800Kidm49Kidney mass QTL 49kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)61681010761810107Rat
8552910Pigfal5Plasma insulin-like growth factor 1 level QTL 54.3blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)61941788764417887Rat
1641898Colcr4Colorectal carcinoma resistance QTL43.710.0007intestine integrity trait (VT:0010554)well differentiated malignant colorectal tumor surface area measurement (CMO:0002077)62151530265784818Rat
2293839Kiddil2Kidney dilation QTL 24.8kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)62204285484763421Rat
2293841Kiddil4Kidney dilation QTL 44.4kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)62204285484763421Rat
8693632Alc27Alcohol consumption QTL 272.20.791drinking behavior trait (VT:0001422)calculated ethanol drink intake rate (CMO:0001615)63425776653855198Rat
1300143Rf14Renal function QTL 142.92renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)63436743680490628Rat
1331779Rf38Renal function QTL 382.876kidney blood vessel physiology trait (VT:0100012)absolute change in renal vascular resistance (CMO:0001900)63499565675623393Rat
634318Bw118Body weight QTL 1183.55abdominal fat pad mass (VT:1000711)abdominal fat pad weight (CMO:0000088)63626028860606186Rat
6893340Cm77Cardiac mass QTL 770.260.57heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)63626028884763275Rat
1354632Scl29Serum cholesterol level QTL 293.74blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)63760898075023446Rat
634307Bp141Blood pressure QTL 1414arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)63810630883106308Rat
70199Coreg1Compensatory renal growth QTL 111.8kidney mass (VT:0002707)compensatory renal growth score (CMO:0001894)63819641260606431Rat
9590290Uminl2Urine mineral level QTL 23.960.001urine mineral amount (VT:0015086)urine electrolyte level (CMO:0000593)64167904686679046Rat
9590306Scort18Serum corticosterone level QTL 182.880.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)64167904686679046Rat
9590140Scort4Serum corticosterone level QTL 414.490.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)64167904686679046Rat
634330Pia16Pristane induced arthritis QTL 163.9joint integrity trait (VT:0010548)arthritic paw count (CMO:0001460)648432758108268790Rat


Additional Information

Database Acc Id Source(s)
UniSTS 228043 UniSTS