rs66395656 Marker Search Result - Rat Genome Database

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General

Marker: rs66395656

Symbol:

rs66395656

Previously known as:

SHRSPc37a07_r1_221; ENSRNOSNP2792206; ENSRNOSNP2659695; ENSRNOSNP2145073; ENSEMBL|tmpshr1567698;

RGD ID:

8693339

Type:

SNV

Expected Size:

0 (bp)

Notes

G/T

Position

Rat Assembly	Chr	Position (strand)	Source	JBrowse
Rnor_6.0	6	53,855,198 - 53,855,198	RGD	Rnor6.0
Rnor_5.0	6	63,475,800 - 63,475,800	RGD	Rnor5.0
RGSC_v3.4	6	53,078,918 - 53,078,918	RGD	RGSC3.4
Celera	6	50,287,709 - 50,287,709	RGD

Is Marker For:

QTLs: Alc27

Annotation

References - curated

#	Reference Title	Reference Citation
1.	Data registered by Dr. Morton Printz	Personal communication between Dr. Printz and the RGD curators.
2.	Is the Alcohol Deprivation Effect Genetically Mediated? Studies with HXB/BXH Recombinant Inbred Rat Strains.	Vanderlinden LA, etal., Alcohol Clin Exp Res. 2014 Jun 24. doi: 10.1111/acer.12471.

Strains and Sequence

Region

Nucleotide Sequences

Additional Information

External Database Links

Database	Acc Id	Source(s)
dbSNP (RS)	rs66395656
dbSNP (SS)	ss179350780
	ss194188066
	ss87213357
	ss88500848
Ensembl SNP	rs66395656

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Marker: rs66395656