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Gene: Odc1 (ornithine decarboxylase 1) Rattus norvegicus
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Symbol: Odc1
Name: ornithine decarboxylase 1
Description: Exhibits ornithine decarboxylase activity. Involved in putrescine biosynthetic process. Localizes to the perinuclear region of cytoplasm. Orthologous to human ODC1 (ornithine decarboxylase 1); PARTICIPATES IN polyamine metabolic pathway; putrescine metabolic pathway; spermidine metabolic pathway; INTERACTS WITH (+)-pilocarpine; (R)-noradrenaline; (RS)-amphetamine.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: Odc; ornithine decarboxylase; Ornitine decarboxylase; RNODC
Orthologs:
Homo sapiens (human) : ODC1 (ornithine decarboxylase 1)  HGNC  Alliance
Mus musculus (house mouse) : Odc1 (ornithine decarboxylase, structural 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Odc1 (ornithine decarboxylase 1)
Pan paniscus (bonobo/pygmy chimpanzee) : ODC1 (ornithine decarboxylase 1)
Canis lupus familiaris (dog) : ODC1 (ornithine decarboxylase 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Odc1 (ornithine decarboxylase 1)
Sus scrofa (pig) : ODC1 (ornithine decarboxylase 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0642,852,529 - 42,859,142 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0652,565,188 - 52,571,773 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4641,309,211 - 41,315,796 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1641,312,265 - 41,318,665 (+)NCBI
Celera639,628,825 - 39,635,308 (+)NCBICelera
Cytogenetic Map6q16NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
Phenotype Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Odc1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 3227
Created: 2000-05-25
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.