Slc25a21 (solute carrier family 25 member 21) - Rat Genome Database

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Gene: Slc25a21 (solute carrier family 25 member 21) Rattus norvegicus
Analyze
Symbol: Slc25a21
Name: solute carrier family 25 member 21
RGD ID: 621444
Description: Predicted to enable alpha-ketoglutarate transmembrane transporter activity. Predicted to be involved in mitochondrial alpha-ketoglutarate transmembrane transport. Predicted to be located in mitochondrial inner membrane. Human ortholog(s) of this gene implicated in mitochondrial DNA depletion syndrome 18. Orthologous to human SLC25A21 (solute carrier family 25 member 21); INTERACTS WITH 2,2',4,4'-Tetrabromodiphenyl ether; 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: MGC105329; mitochondrial 2-oxodicarboxylate carrier; Odc1; oxodicarboxylate carrier; solute carrier family 25 (mitochondrial oxoadipate carrier), member 21; solute carrier family 25 (mitochondrial oxodicarboxylate carrier), member 21
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8679,938,480 - 80,437,937 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl679,938,480 - 80,437,502 (-)EnsemblGRCr8
mRatBN7.2674,203,439 - 74,702,902 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl674,203,440 - 74,702,680 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx674,616,827 - 75,122,323 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0674,916,140 - 75,421,635 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0674,343,605 - 74,849,121 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0677,624,384 - 78,121,339 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl677,624,385 - 77,848,434 (-)Ensemblrn6Rnor6.0
Rnor_5.0687,150,622 - 87,637,326 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4677,124,451 - 77,632,510 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera673,010,400 - 73,501,204 (-)NCBICelera
RGSC_v3.1677,127,574 - 77,635,636 (-)NCBI
Cytogenetic Map6q23NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Identification of the human mitochondrial oxodicarboxylate carrier. Bacterial expression, reconstitution, functional characterization, tissue distribution, and chromosomal location. Fiermonte G, etal., J Biol Chem 2001 Mar 16;276(11):8225-30.
2. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
3. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
4. GOA pipeline RGD automated data pipeline
5. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:12477932   PMID:15489334   PMID:18614015   PMID:21873635   PMID:34800366  


Genomics

Comparative Map Data
Slc25a21
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8679,938,480 - 80,437,937 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl679,938,480 - 80,437,502 (-)EnsemblGRCr8
mRatBN7.2674,203,439 - 74,702,902 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl674,203,440 - 74,702,680 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx674,616,827 - 75,122,323 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0674,916,140 - 75,421,635 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0674,343,605 - 74,849,121 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0677,624,384 - 78,121,339 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl677,624,385 - 77,848,434 (-)Ensemblrn6Rnor6.0
Rnor_5.0687,150,622 - 87,637,326 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4677,124,451 - 77,632,510 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera673,010,400 - 73,501,204 (-)NCBICelera
RGSC_v3.1677,127,574 - 77,635,636 (-)NCBI
Cytogenetic Map6q23NCBI
SLC25A21
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381436,677,921 - 37,172,606 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1436,677,921 - 37,172,606 (-)Ensemblhg38GRCh38
GRCh371437,147,126 - 37,641,811 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361436,218,829 - 36,711,616 (-)NCBIBuild 36Build 36hg18NCBI36
Build 341436,218,828 - 36,711,616NCBI
Celera1417,010,674 - 17,505,455 (-)NCBICelera
Cytogenetic Map14q13.3NCBI
HuRef1417,261,499 - 17,756,171 (-)NCBIHuRef
CHM1_11437,146,272 - 37,641,918 (-)NCBICHM1_1
T2T-CHM13v2.01430,867,261 - 31,362,039 (-)NCBIT2T-CHM13v2.0
Slc25a21
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391256,759,419 - 57,244,257 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1256,759,419 - 57,244,257 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm381256,712,634 - 57,197,472 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1256,712,634 - 57,197,472 (-)Ensemblmm10GRCm38
MGSCv371257,813,621 - 58,298,459 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361257,630,836 - 58,115,484 (-)NCBIMGSCv36mm8
Celera1257,878,480 - 58,364,481 (-)NCBICelera
Cytogenetic Map12C1NCBI
cM Map1224.54NCBI
Slc25a21
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540923,952,595 - 24,421,307 (+)Ensembl
ChiLan1.0NW_00495540923,949,794 - 24,421,944 (+)NCBIChiLan1.0ChiLan1.0
SLC25A21
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21537,993,058 - 38,490,301 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11437,209,563 - 37,708,394 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01417,431,789 - 17,926,277 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11435,793,261 - 36,287,436 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1435,794,557 - 35,990,633 (-)EnsemblpanPan2panpan1.1
SLC25A21
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1815,239,634 - 15,708,964 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl815,238,719 - 15,708,526 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha815,039,326 - 15,508,864 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0815,350,597 - 15,821,777 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl815,350,762 - 15,821,128 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1815,049,508 - 15,519,554 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0815,116,588 - 15,586,598 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0815,406,571 - 15,876,813 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Slc25a21
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440864047,169,640 - 47,650,696 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493649410,676,235 - 11,156,083 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_00493649410,675,534 - 11,157,829 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SLC25A21
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl762,810,937 - 63,325,625 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1762,808,126 - 63,326,634 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2768,085,398 - 68,235,406 (+)NCBISscrofa10.2Sscrofa10.2susScr3
SLC25A21
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12413,472,050 - 13,974,991 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2413,473,395 - 13,680,176 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_0236660532,472,343 - 3,007,377 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Slc25a21
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462483875,767 - 128,843 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_00462483868,999 - 129,463 (+)NCBIHetGla 1.0HetGla 1.0hetGla2

Variants

.
Variants in Slc25a21
4201 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:58
Count of miRNA genes:53
Interacting mature miRNAs:54
Transcripts:ENSRNOT00000034342
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
9590290Uminl2Urine mineral level QTL 23.960.001urine mineral amount (VT:0015086)urine electrolyte level (CMO:0000593)64451097489510974Rat
2293088Iddm28Insulin dependent diabetes mellitus QTL 285.21blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)668767270135411972Rat
4889933Bss88Bone structure and strength QTL 883.8tibia size trait (VT:0100001)tibia total bone volume (CMO:0001724)65368492198684921Rat
634307Bp141Blood pressure QTL 1414arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)64095756485957564Rat
1331743Uae28Urinary albumin excretion QTL 284.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)64515378690153786Rat
5684992Bmd83Bone mineral density QTL 824.8tibia mineral mass (VT:1000283)bone mineral content (CMO:0001554)65368492198684921Rat
4145119Mcs25Mammary carcinoma susceptibility QTL 250.0001mammary gland integrity trait (VT:0010552)ratio of deaths to total study population during a period of time (CMO:0001023)671278722116278722Rat
70176Mcsm1Mammary carcinoma susceptibility modifier QTL 1mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)664367996109367996Rat
1558641Cm47Cardiac mass QTL 472.90.001heart mass (VT:0007028)heart wet weight (CMO:0000069)66345744194939581Rat
724524Uae2Urinary albumin excretion QTL 22.70.0005urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)679198463144254945Rat
737827Hcar11Hepatocarcinoma resistance QTL 114.4liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)646050607116278722Rat
724513Uae14Urinary albumin excretion QTL 146.5urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)64604735391047353Rat
2293839Kiddil2Kidney dilation QTL 24.8kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)62661831486868070Rat
1576309Emca7Estrogen-induced mammary cancer QTL 74mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)620859430113082285Rat
9590140Scort4Serum corticosterone level QTL 414.490.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)64451097489510974Rat
2301964Bp323Blood pressure QTL 3234.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)6186868070Rat
9590306Scort18Serum corticosterone level QTL 182.880.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)64451097489510974Rat
2293841Kiddil4Kidney dilation QTL 44.4kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)62661831486868070Rat
4889848Pur25Proteinuria QTL 25140.003urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)66303731995934232Rat
6893340Cm77Cardiac mass QTL 770.260.57heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)63902865986867923Rat
5684963Bss99Bone structure and strength QTL 993.1tibia area (VT:1000281)tibia area measurement (CMO:0001382)65368492198684921Rat
1576302Schws4Schwannoma susceptibility QTL 40.0078nervous system integrity trait (VT:0010566)percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)678204640123204640Rat
1300075Glom7Glomerulus QTL 75.60.0000002kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)676937178121937178Rat
1300143Rf14Renal function QTL 142.92renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)64016318385163183Rat
6893332Cm74Cardiac mass QTL 740.40.64heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)66345744194939581Rat

Markers in Region
D6Rat21  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2674,627,755 - 74,627,930 (+)MAPPERmRatBN7.2
Rnor_6.0678,045,234 - 78,045,408NCBIRnor6.0
Rnor_5.0687,562,651 - 87,562,825UniSTSRnor5.0
RGSC_v3.4677,557,737 - 77,557,911UniSTSRGSC3.4
RGSC_v3.4677,557,580 - 77,558,064RGDRGSC3.4
Celera673,427,050 - 73,427,224UniSTS
RGSC_v3.1677,560,863 - 77,561,037RGD
RH 3.4 Map6543.6RGD
RH 3.4 Map6543.6UniSTS
RH 2.0 Map6764.8RGD
SHRSP x BN Map651.1399RGD
FHH x ACI Map660.26RGD
Cytogenetic Map6q23UniSTS
D6Rat49  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr8680,243,279 - 80,243,421 (+)Marker Load Pipeline
mRatBN7.2674,508,247 - 74,508,389 (+)MAPPERmRatBN7.2
Rnor_6.0677,923,451 - 77,923,592NCBIRnor6.0
Rnor_5.0687,446,671 - 87,446,812UniSTSRnor5.0
RGSC_v3.4677,434,659 - 77,434,801RGDRGSC3.4
RGSC_v3.4677,434,660 - 77,434,801UniSTSRGSC3.4
Celera673,307,456 - 73,307,597UniSTS
RGSC_v3.1677,437,785 - 77,437,927RGD
RH 3.4 Map6541.3UniSTS
RH 3.4 Map6541.3RGD
RH 2.0 Map6755.3RGD
FHH x ACI Map661.34RGD
Cytogenetic Map6q23UniSTS
D6Rat127  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr8680,091,994 - 80,092,244 (+)Marker Load Pipeline
mRatBN7.2674,356,958 - 74,357,208 (+)MAPPERmRatBN7.2
Rnor_6.0677,777,639 - 77,777,888NCBIRnor6.0
Rnor_5.0687,302,823 - 87,303,072UniSTSRnor5.0
RGSC_v3.4677,278,409 - 77,278,745RGDRGSC3.4
RGSC_v3.4677,278,431 - 77,278,680UniSTSRGSC3.4
Celera673,163,912 - 73,164,161UniSTS
RGSC_v3.1677,281,557 - 77,281,806RGD
RH 3.4 Map6536.9UniSTS
RH 3.4 Map6536.9RGD
RH 2.0 Map6750.7RGD
SHRSP x BN Map649.9899RGD
Cytogenetic Map6q23UniSTS
D6Got97  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2674,520,934 - 74,521,182 (+)MAPPERmRatBN7.2
Rnor_6.0677,936,274 - 77,936,521NCBIRnor6.0
Rnor_5.0687,459,494 - 87,459,741UniSTSRnor5.0
RGSC_v3.4677,450,259 - 77,450,507RGDRGSC3.4
RGSC_v3.4677,450,260 - 77,450,507UniSTSRGSC3.4
Celera673,320,170 - 73,320,417UniSTS
RGSC_v3.1677,453,386 - 77,453,633RGD
RH 3.4 Map6541.3UniSTS
RH 3.4 Map6541.3RGD
RH 2.0 Map6761.2RGD
Cytogenetic Map6q23UniSTS
BE121226  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2674,702,700 - 74,702,850 (+)MAPPERmRatBN7.2
Rnor_6.0678,120,177 - 78,120,326NCBIRnor6.0
Rnor_5.0687,636,760 - 87,636,909UniSTSRnor5.0
RGSC_v3.4677,632,680 - 77,632,829UniSTSRGSC3.4
Celera673,501,374 - 73,501,523UniSTS
RH 3.4 Map6542.2UniSTS
Cytogenetic Map6q23UniSTS
AU047466  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2674,676,594 - 74,676,750 (+)MAPPERmRatBN7.2
Rnor_6.0678,094,071 - 78,094,226NCBIRnor6.0
Rnor_5.0687,610,830 - 87,610,985UniSTSRnor5.0
RGSC_v3.4677,606,574 - 77,606,729UniSTSRGSC3.4
Celera673,475,249 - 73,475,403UniSTS
Cytogenetic Map6q23UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
8 11 81 158 91 90 59 89 59 6 398 211 22 123 112 101 31 20 20

Sequence


Ensembl Acc Id: ENSRNOT00000034342   ⟹   ENSRNOP00000037607
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl679,938,480 - 80,399,348 (-)Ensembl
mRatBN7.2 Ensembl674,203,440 - 74,664,321 (-)Ensembl
Rnor_6.0 Ensembl677,624,385 - 77,848,434 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000097338   ⟹   ENSRNOP00000083938
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl679,938,480 - 80,194,037 (-)Ensembl
mRatBN7.2 Ensembl674,204,725 - 74,431,892 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000119506   ⟹   ENSRNOP00000084175
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl679,938,480 - 80,437,502 (-)Ensembl
mRatBN7.2 Ensembl674,203,440 - 74,702,680 (-)Ensembl
RefSeq Acc Id: NM_133614   ⟹   NP_598298
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8679,938,480 - 80,437,720 (-)NCBI
mRatBN7.2674,203,439 - 74,702,693 (-)NCBI
Rnor_6.0677,624,384 - 78,120,007 (-)NCBI
Rnor_5.0687,150,622 - 87,637,326 (-)NCBI
RGSC_v3.4677,124,451 - 77,632,510 (-)RGD
Celera673,010,400 - 73,501,204 (-)RGD
Sequence:
RefSeq Acc Id: XM_039111745   ⟹   XP_038967673
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8679,980,862 - 80,437,937 (-)NCBI
mRatBN7.2674,245,822 - 74,702,902 (-)NCBI
RefSeq Acc Id: NP_598298   ⟸   NM_133614
- UniProtKB: Q99JD3 (UniProtKB/Swiss-Prot),   A6HBP1 (UniProtKB/TrEMBL),   A0A140TAF1 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000037607   ⟸   ENSRNOT00000034342
RefSeq Acc Id: XP_038967673   ⟸   XM_039111745
- Peptide Label: isoform X1
Ensembl Acc Id: ENSRNOP00000083938   ⟸   ENSRNOT00000097338
Ensembl Acc Id: ENSRNOP00000084175   ⟸   ENSRNOT00000119506

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q99JD3-F1-model_v2 AlphaFold Q99JD3 1-298 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:621444 AgrOrtholog
BioCyc Gene G2FUF-37425 BioCyc
Ensembl Genes ENSRNOG00000008931 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000119506 ENTREZGENE
  ENSRNOT00000119506.1 UniProtKB/Swiss-Prot
Gene3D-CATH 1.50.40.10 UniProtKB/Swiss-Prot
IMAGE_CLONE IMAGE:7306738 IMAGE-MGC_LOAD
InterPro Mito_2-oxodicarb_carrier UniProtKB/Swiss-Prot
  Mitochondrial_sb/sol_carrier UniProtKB/Swiss-Prot
  Mt_carrier_dom_sf UniProtKB/Swiss-Prot
KEGG Report rno:171151 UniProtKB/Swiss-Prot
MGC_CLONE MGC:105329 IMAGE-MGC_LOAD
NCBI Gene 171151 ENTREZGENE
PANTHER MITOCHONDRIAL 2-OXODICARBOXYLATE CARRIER UniProtKB/Swiss-Prot
  MITOCHONDRIAL 2-OXODICARBOXYLATE CARRIER UniProtKB/Swiss-Prot
Pfam Mito_carr UniProtKB/Swiss-Prot
PhenoGen Slc25a21 PhenoGen
PROSITE SOLCAR UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000008931 RatGTEx
Superfamily-SCOP SSF103506 UniProtKB/Swiss-Prot
UniProt A0A140TAF1 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6G9N8_RAT UniProtKB/TrEMBL
  A6HBP1 ENTREZGENE, UniProtKB/TrEMBL
  ODC_RAT UniProtKB/Swiss-Prot, ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-02-24 Slc25a21  solute carrier family 25 member 21  Slc25a21  solute carrier family 25 (mitochondrial oxoadipate carrier), member 21  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2012-10-16 Slc25a21  solute carrier family 25 (mitochondrial oxoadipate carrier), member 21  Slc25a21  solute carrier family 25 (mitochondrial oxodicarboxylate carrier), member 21  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2004-09-10 Slc25a21  solute carrier family 25 (mitochondrial oxodicarboxylate carrier), member 21      Symbol and Name status set to approved 1299863 APPROVED
2002-08-07 Slc25a21  solute carrier family 25 (mitochondrial oxodicarboxylate carrier), member 21      Symbol and Name status set to provisional 70820 PROVISIONAL