Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Cys1 (cystin 1) Rattus norvegicus
Analyze
Symbol: Cys1
Name: cystin 1
RGD ID: 1596023
Description: Predicted to have several functions, including DNA-binding transcription activator activity, RNA polymerase II-specific; RNA polymerase II cis-regulatory region sequence-specific DNA binding activity; and transcription corepressor activity. Predicted to be involved in animal organ development and regulation of transcription, DNA-templated. Predicted to localize to several cellular components, including cytoskeleton; cytosol; and membrane raft. Orthologous to human CYS1 (cystin 1); INTERACTS WITH 3-chloropropane-1,2-diol; bisphenol A; furan.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: cystin-1; LOC690489; similar to cystin 1
Orthologs:
Homo sapiens (human) : CYS1 (cystin 1)  HGNC  Alliance
Mus musculus (house mouse) : Cys1 (cystin 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Cys1 (cystin 1)
Pan paniscus (bonobo/pygmy chimpanzee) : CYS1 (cystin 1)
Sus scrofa (pig) : CYS1 (cystin 1)
Chlorocebus sabaeus (African green monkey) : CYS1 (cystin 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0643,844,937 - 43,862,131 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl643,844,937 - 43,862,131 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0660,716,420 - 60,733,664 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4642,311,213 - 42,328,045 (-)NCBIRGSC3.4rn4RGSC3.4
Celera640,588,514 - 40,604,945 (-)NCBICelera
Cytogenetic Map6q16NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Cys1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1596023
Created: 2006-11-20
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.