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Gene: Hpcal1 (hippocalcin-like 1) Rattus norvegicus
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Symbol: Hpcal1
Name: hippocalcin-like 1
Description: Predicted to have calcium ion binding activity. Predicted to localize to the membrane. Orthologous to human HPCAL1 (hippocalcin like 1); INTERACTS WITH 17beta-estradiol; 2,4-dinitrotoluene; 4,4'-diaminodiphenylmethane.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: hippocalcin-like protein 1; MGC105459; neural visinin-like Ca2+-binding protein type 3; neural visinin-like protein 3; NVL-3; NVP-3; Nvp3; VILIP-3; visinin-like protein 3
Orthologs:
Homo sapiens (human) : HPCAL1 (hippocalcin like 1)  HGNC  Alliance
Mus musculus (house mouse) : Hpcal1 (hippocalcin-like 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Hpcal1 (hippocalcin like 1)
Pan paniscus (bonobo/pygmy chimpanzee) : HPCAL1 (hippocalcin like 1)
Canis lupus familiaris (dog) : HPCAL1 (hippocalcin like 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Hpcal1 (hippocalcin like 1)
Sus scrofa (pig) : HPCAL1 (hippocalcin like 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0643,001,920 - 43,109,083 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0652,713,426 - 52,818,872 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4641,458,062 - 41,576,771 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1641,461,014 - 41,579,897 (+)NCBI
Celera639,777,051 - 39,883,137 (+)NCBICelera
Cytogenetic Map6q16NCBI
JBrowse: View Region in Genome Browser (JBrowse)
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Annotation    (Toggle Annotation Detail/Summary View)

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References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
  
More on Hpcal1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 708375
Created: 2003-09-23
Species: Rattus norvegicus
Last Modified: 2019-04-12
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.