LOC102555378 (uncharacterized LOC102555378) - Rat Genome Database

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Gene: LOC102555378 (uncharacterized LOC102555378) Rattus norvegicus
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Symbol: LOC102555378
Name: uncharacterized LOC102555378
RGD ID: 7499548
Description:
Type: ncrna
RefSeq Status: MODEL
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8653,812,780 - 53,843,163 (+)NCBIGRCr8
mRatBN7.2648,085,415 - 48,115,642 (+)NCBImRatBN7.2mRatBN7.2
Rnor_6.0650,786,993 - 50,811,371 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0659,456,770 - 59,479,619 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera647,287,793 - 47,303,874 (+)NCBICelera
Cytogenetic Map6q16NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model




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Variants in LOC102555378
131 total Variants

1 to 10 of 25 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
9590290Uminl2Urine mineral level QTL 23.960.001urine mineral amount (VT:0015086)urine electrolyte level (CMO:0000593)63878398983783989Rat
8693632Alc27Alcohol consumption QTL 272.20.791drinking behavior trait (VT:0001422)calculated ethanol drink intake rate (CMO:0001615)63432335751121479Rat
634318Bw118Body weight QTL 1183.55abdominal fat pad mass (VT:1000711)abdominal fat pad weight (CMO:0000088)63330954957730294Rat
10401812Kidm54Kidney mass QTL 54kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)61436878859368788Rat
634307Bp141Blood pressure QTL 1414arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)63523041780230417Rat
2292589Emca10Estrogen-induced mammary cancer QTL 100.048mammary gland integrity trait (VT:0010552)post-insult time to mammary tumor formation (CMO:0000345)61653614061536140Rat
634330Pia16Pristane induced arthritis QTL 163.9joint integrity trait (VT:0010548)arthritic paw count (CMO:0001460)645790088104200226Rat
10401800Kidm49Kidney mass QTL 49kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)61436878859368788Rat
1300164Rf15Renal function QTL 153.12renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)6507449754641141Rat
1331779Rf38Renal function QTL 382.876kidney blood vessel physiology trait (VT:0100012)absolute change in renal vascular resistance (CMO:0001900)63207442872227641Rat

1 to 10 of 25 rows






RefSeq Acc Id: XR_001838366
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8653,812,937 - 53,843,163 (+)NCBI
mRatBN7.2648,085,415 - 48,115,642 (+)NCBI
Rnor_6.0650,786,996 - 50,811,371 (+)NCBI
Sequence:
RefSeq Acc Id: XR_010052582
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8653,812,937 - 53,837,167 (+)NCBI
RefSeq Acc Id: XR_010052583
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8653,813,296 - 53,832,796 (+)NCBI
RefSeq Acc Id: XR_010052584
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8653,812,780 - 53,832,796 (+)NCBI
RefSeq Acc Id: XR_354728
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8653,812,937 - 53,832,796 (+)NCBI
mRatBN7.2648,085,415 - 48,105,274 (+)NCBI
Rnor_6.0650,786,993 - 50,808,880 (+)NCBI
Rnor_5.0659,456,770 - 59,479,619 (+)NCBI
Sequence:


Database
Acc Id
Source(s)
BioCyc Gene G2FUF-37916 BioCyc
NCBI Gene LOC102555378 ENTREZGENE
PhenoGen LOC102555378 PhenoGen
RNAcentral URS0000CCE5D3 RNACentral
  URS0000CCFC1F RNACentral
  URS0000CD0241 RNACentral
  URS0000CD06CF RNACentral


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2013-12-17 LOC102555378  uncharacterized LOC102555378      Symbol and Name status set to provisional 70820 PROVISIONAL