Cpsf3 (cleavage and polyadenylation specific factor 3) - Rat Genome Database

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Gene: Cpsf3 (cleavage and polyadenylation specific factor 3) Rattus norvegicus
Analyze
Symbol: Cpsf3
Name: cleavage and polyadenylation specific factor 3
RGD ID: 1305767
Description: Predicted to enable RNA binding activity; RNA nuclease activity; and metal ion binding activity. Predicted to be involved in co-transcriptional mRNA 3'-end processing, cleavage and polyadenylation pathway; mRNA 3'-end processing by stem-loop binding activity and cleavage; and positive regulation of G1/S transition of mitotic cell cycle. Predicted to be part of mRNA cleavage and polyadenylation specificity factor complex. Orthologous to human CPSF3 (cleavage and polyadenylation specific factor 3); PARTICIPATES IN 3'-end pre-mRNA processing pathway; RNA polymerase II transcription termination pathway; mRNA decay pathway; INTERACTS WITH 2,4-dinitrotoluene; acrylamide; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: cleavage and polyadenylation specific factor 3, 73kDa; cleavage and polyadenylation specificity factor 3; cleavage and polyadenylation specificity factor subunit 3; LOC298916; MGC124885
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8646,564,855 - 46,592,776 (+)NCBIGRCr8
mRatBN7.2640,836,121 - 40,864,129 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl640,836,097 - 40,864,128 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx641,158,291 - 41,186,220 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0641,472,982 - 41,500,910 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0640,906,246 - 40,934,169 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0643,363,792 - 43,391,712 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl643,363,792 - 43,391,712 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0660,231,498 - 60,259,421 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4641,844,971 - 41,873,619 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1641,848,090 - 41,876,746 (+)NCBI
Celera640,123,274 - 40,151,191 (+)NCBICelera
Cytogenetic Map6q16NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Pre-mRNA 3'-end processing complex assembly and function. Chan S, etal., Wiley Interdiscip Rev RNA. 2011 May-Jun;2(3):321-35. doi: 10.1002/wrna.54. Epub 2010 Oct 18.
2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
4. Means to an end: mechanisms of alternative polyadenylation of messenger RNA precursors. Gruber AR, etal., Wiley Interdiscip Rev RNA. 2014 Mar-Apr;5(2):183-96. doi: 10.1002/wrna.1206. Epub 2013 Nov 14.
5. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
6. GOA pipeline RGD automated data pipeline
7. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
8. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
9. Comprehensive gene review and curation RGD comprehensive gene curation
Additional References at PubMed
PMID:12477932   PMID:16115198   PMID:18305108   PMID:18688255   PMID:18955505   PMID:21102410  


Genomics

Comparative Map Data
Cpsf3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8646,564,855 - 46,592,776 (+)NCBIGRCr8
mRatBN7.2640,836,121 - 40,864,129 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl640,836,097 - 40,864,128 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx641,158,291 - 41,186,220 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0641,472,982 - 41,500,910 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0640,906,246 - 40,934,169 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0643,363,792 - 43,391,712 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl643,363,792 - 43,391,712 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0660,231,498 - 60,259,421 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4641,844,971 - 41,873,619 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1641,848,090 - 41,876,746 (+)NCBI
Celera640,123,274 - 40,151,191 (+)NCBICelera
Cytogenetic Map6q16NCBI
CPSF3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3829,423,654 - 9,473,101 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl29,423,651 - 9,473,101 (+)EnsemblGRCh38hg38GRCh38
GRCh3729,563,783 - 9,613,230 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 3629,481,319 - 9,530,678 (+)NCBINCBI36Build 36hg18NCBI36
Build 3429,514,465 - 9,563,825NCBI
Celera29,475,764 - 9,525,116 (+)NCBICelera
Cytogenetic Map2p25.1NCBI
HuRef29,409,149 - 9,458,762 (+)NCBIHuRef
CHM1_129,493,101 - 9,542,657 (+)NCBICHM1_1
T2T-CHM13v2.029,448,733 - 9,498,144 (+)NCBIT2T-CHM13v2.0
Cpsf3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391221,336,298 - 21,365,057 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1221,335,392 - 21,365,057 (+)EnsemblGRCm39 Ensembl
GRCm381221,286,273 - 21,315,056 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1221,285,391 - 21,315,056 (+)EnsemblGRCm38mm10GRCm38
MGSCv371221,292,158 - 21,320,917 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361221,532,916 - 21,561,324 (+)NCBIMGSCv36mm8
Celera1219,589,812 - 19,618,910 (-)NCBICelera
Cytogenetic Map12A1.3NCBI
cM Map128.3NCBI
Cpsf3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554875,146,541 - 5,170,077 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554875,146,541 - 5,170,077 (+)NCBIChiLan1.0ChiLan1.0
CPSF3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v212117,053,752 - 117,103,110 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12A117,057,732 - 117,107,078 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02A9,413,517 - 9,462,758 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12A9,576,871 - 9,626,202 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A9,576,871 - 9,626,193 (+)Ensemblpanpan1.1panPan2
CPSF3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1176,537,404 - 6,576,121 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl176,537,465 - 6,575,825 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha176,465,190 - 6,504,684 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0176,636,209 - 6,675,495 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl176,636,240 - 6,675,584 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1176,528,730 - 6,567,996 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0176,531,134 - 6,570,198 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0176,544,518 - 6,584,022 (+)NCBIUU_Cfam_GSD_1.0
Cpsf3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440629251,059,277 - 51,095,135 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365325,814,329 - 5,850,352 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365325,814,331 - 5,850,188 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CPSF3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl3126,868,467 - 126,905,746 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.13126,868,519 - 126,905,699 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.23135,136,985 - 135,174,154 (-)NCBISscrofa10.2Sscrofa10.2susScr3
CPSF3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11498,174,022 - 98,226,486 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1498,173,117 - 98,226,907 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604514,096,428 - 14,147,720 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Cpsf3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624969265,117 - 290,361 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624969265,457 - 290,514 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Cpsf3
130 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:27
Count of miRNA genes:27
Interacting mature miRNAs:27
Transcripts:ENSRNOT00000009652
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
9590290Uminl2Urine mineral level QTL 23.960.001urine mineral amount (VT:0015086)urine electrolyte level (CMO:0000593)63878398983783989Rat
8552962Pigfal16Plasma insulin-like growth factor 1 level QTL 169.4blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)6141223769Rat
634318Bw118Body weight QTL 1183.55abdominal fat pad mass (VT:1000711)abdominal fat pad weight (CMO:0000088)63330954957730294Rat
634307Bp141Blood pressure QTL 1414arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)63523041780230417Rat
10401812Kidm54Kidney mass QTL 54kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)61436878859368788Rat
2292589Emca10Estrogen-induced mammary cancer QTL 100.048mammary gland integrity trait (VT:0010552)post-insult time to mammary tumor formation (CMO:0000345)61653614061536140Rat
10401800Kidm49Kidney mass QTL 49kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)61436878859368788Rat
1331779Rf38Renal function QTL 382.876kidney blood vessel physiology trait (VT:0100012)absolute change in renal vascular resistance (CMO:0001900)63207442872227641Rat
1300164Rf15Renal function QTL 153.12renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)6507449754641141Rat
9589129Insul24Insulin level QTL 2419.060.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)6141223769Rat
1354632Scl29Serum cholesterol level QTL 293.74blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)63509870971636405Rat
4145119Mcs25Mammary carcinoma susceptibility QTL 250.0001mammary gland integrity trait (VT:0010552)ratio of deaths to total study population during a period of time (CMO:0001023)610894415110548006Rat
7411603Foco13Food consumption QTL 135.50.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)6141223769Rat
738024Sach5Saccharine consumption QTL 53.90.00039consumption behavior trait (VT:0002069)saccharin intake volume to total fluid intake volume ratio (CMO:0001601)6143394190Rat
7411542Bw127Body weight QTL 1275.50.001body mass (VT:0001259)body weight gain (CMO:0000420)6141223769Rat
9589048Scfw3Subcutaneous fat weight QTL 34.570.001subcutaneous adipose mass (VT:1000472)abdominal subcutaneous fat pad weight (CMO:0002069)6141223769Rat
2293839Kiddil2Kidney dilation QTL 24.8kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)62086642281133036Rat
1576309Emca7Estrogen-induced mammary cancer QTL 74mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)615107216107351382Rat
9590140Scort4Serum corticosterone level QTL 414.490.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)63878398983783989Rat
2293709Bss23Bone structure and strength QTL 235.180.0001femur morphology trait (VT:0000559)femur cross-sectional area (CMO:0001661)6142487980Rat
2293650Bss31Bone structure and strength QTL 315.050.0001femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)6142487980Rat
9590306Scort18Serum corticosterone level QTL 182.880.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)63878398983783989Rat
1578665Bss16Bone structure and strength QTL 164.4femur morphology trait (VT:0000559)bone trabecular cross-sectional area (CMO:0002311)61173566972593685Rat
7411584Foco4Food consumption QTL 44.30.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)6142838846Rat
2293841Kiddil4Kidney dilation QTL 44.4kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)62086642281133036Rat
1641898Colcr4Colorectal carcinoma resistance QTL43.710.0007intestine integrity trait (VT:0010554)well differentiated malignant colorectal tumor surface area measurement (CMO:0002077)62033877762613667Rat
1578668Bmd14Bone mineral density QTL 143.8femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)61173566972593685Rat
6893340Cm77Cardiac mass QTL 770.260.57heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)63330954981132889Rat
70199Coreg1Compensatory renal growth QTL 111.8kidney mass (VT:0002707)compensatory renal growth score (CMO:0001894)63569161857730540Rat
2301972Bp325Blood pressure QTL 3254.8arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)6172227641Rat
2293656Bss28Bone structure and strength QTL 286.790.0001femur morphology trait (VT:0000559)femur midshaft cortical cross-sectional area (CMO:0001663)6142487980Rat
1300143Rf14Renal function QTL 142.92renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)63443413777102317Rat
1354664Slep2Serum leptin concentration QTL 24.49blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)61653614071636405Rat

Markers in Region
RH131025  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2640,862,568 - 40,862,788 (+)MAPPERmRatBN7.2
Rnor_6.0643,390,154 - 43,390,373NCBIRnor6.0
Rnor_5.0660,257,863 - 60,258,082UniSTSRnor5.0
RGSC_v3.4641,872,061 - 41,872,280UniSTSRGSC3.4
Celera640,149,633 - 40,149,852UniSTS
RH 3.4 Map6226.2UniSTS
Cytogenetic Map6q16UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31

Sequence


Ensembl Acc Id: ENSRNOT00000091061   ⟹   ENSRNOP00000071669
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl640,836,097 - 40,864,125 (+)Ensembl
Rnor_6.0 Ensembl643,363,792 - 43,391,712 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000094148   ⟹   ENSRNOP00000096053
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl640,839,571 - 40,864,128 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000106025   ⟹   ENSRNOP00000082326
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl640,836,097 - 40,863,569 (+)Ensembl
RefSeq Acc Id: NM_001030030   ⟹   NP_001025201
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8646,564,855 - 46,592,776 (+)NCBI
mRatBN7.2640,836,204 - 40,864,128 (+)NCBI
Rnor_6.0643,363,792 - 43,391,712 (+)NCBI
Rnor_5.0660,231,498 - 60,259,421 (+)NCBI
RGSC_v3.4641,844,971 - 41,873,619 (+)RGD
Celera640,123,274 - 40,151,191 (+)RGD
Sequence:
RefSeq Acc Id: XM_039111954   ⟹   XP_038967882
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8646,565,282 - 46,592,773 (+)NCBI
mRatBN7.2640,836,460 - 40,864,129 (+)NCBI
RefSeq Acc Id: XM_039111955   ⟹   XP_038967883
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8646,564,864 - 46,590,137 (+)NCBI
mRatBN7.2640,836,121 - 40,861,484 (+)NCBI
RefSeq Acc Id: NP_001025201   ⟸   NM_001030030
- UniProtKB: Q499P4 (UniProtKB/TrEMBL),   A6HAV9 (UniProtKB/TrEMBL),   G3V6W7 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000071669   ⟸   ENSRNOT00000091061
RefSeq Acc Id: XP_038967883   ⟸   XM_039111955
- Peptide Label: isoform X1
- UniProtKB: A6HAW0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038967882   ⟸   XM_039111954
- Peptide Label: isoform X2
- UniProtKB: A0A8I6AQC0 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000096053   ⟸   ENSRNOT00000094148
Ensembl Acc Id: ENSRNOP00000082326   ⟸   ENSRNOT00000106025
Protein Domains
Beta-Casp   Metallo-beta-lactamase   Pre-mRNA 3'-end-processing endonuclease

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-G3V6W7-F1-model_v2 AlphaFold G3V6W7 1-685 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13694513
Promoter ID:EPDNEW_R5038
Type:initiation region
Name:Cpsf3_1
Description:cleavage and polyadenylation specific factor 3
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0643,363,777 - 43,363,837EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1305767 AgrOrtholog
BioCyc Gene G2FUF-38040 BioCyc
Ensembl Genes ENSRNOG00000052418 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000091061.2 UniProtKB/TrEMBL
  ENSRNOT00000094148.1 UniProtKB/TrEMBL
  ENSRNOT00000106025.1 UniProtKB/TrEMBL
Gene3D-CATH 3.40.50.10890 UniProtKB/TrEMBL
  3.60.15.10 UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:7929543 IMAGE-MGC_LOAD
InterPro Beta-lactamas-like UniProtKB/TrEMBL
  Beta_Casp UniProtKB/TrEMBL
  CPSF73-100_C UniProtKB/TrEMBL
  Metallo-hydrolase/OxRdtase UniProtKB/TrEMBL
  RMMBL UniProtKB/TrEMBL
  RNA_Proc_MBL-domain UniProtKB/TrEMBL
KEGG Report rno:298916 UniProtKB/TrEMBL
MGC_CLONE MGC:124885 IMAGE-MGC_LOAD
NCBI Gene 298916 ENTREZGENE
PANTHER CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR FAMILY MEMBER UniProtKB/TrEMBL
  CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 3 UniProtKB/TrEMBL
Pfam Beta-Casp UniProtKB/TrEMBL
  CPSF73-100_C UniProtKB/TrEMBL
  Lactamase_B_6 UniProtKB/TrEMBL
  RMMBL UniProtKB/TrEMBL
PhenoGen Cpsf3 PhenoGen
RatGTEx ENSRNOG00000052418 RatGTEx
SMART Beta-Casp UniProtKB/TrEMBL
  CPSF73-100_C UniProtKB/TrEMBL
  Lactamase_B UniProtKB/TrEMBL
Superfamily-SCOP SSF56281 UniProtKB/TrEMBL
UniProt A0A8I5ZTR8_RAT UniProtKB/TrEMBL
  A0A8I6AQC0 ENTREZGENE, UniProtKB/TrEMBL
  A6HAV9 ENTREZGENE, UniProtKB/TrEMBL
  A6HAW0 ENTREZGENE, UniProtKB/TrEMBL
  A6HAW1_RAT UniProtKB/TrEMBL
  G3V6W7 ENTREZGENE, UniProtKB/TrEMBL
  Q499P4 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-11-19 Cpsf3  cleavage and polyadenylation specific factor 3  Cpsf3  cleavage and polyadenylation specific factor 3, 73kDa  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2012-01-10 Cpsf3  cleavage and polyadenylation specific factor 3, 73kDa  Cpsf3  cleavage and polyadenylation specificity factor 3  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2005-12-06 Cpsf3  cleavage and polyadenylation specificity factor 3  Cpsf3_predicted  cleavage and polyadenylation specificity factor 3 (predicted)  Symbol and Name updated 1559027 APPROVED
2005-01-12 Cpsf3_predicted  cleavage and polyadenylation specificity factor 3 (predicted)      Symbol and Name status set to approved 70820 APPROVED