BQ209938 Marker Search Result - Rat Genome Database

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Marker: BQ209938

Symbol: BQ209938
Previously known as:
RGD ID: 5085318
Expected Size: 150 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2667,728,118 - 67,728,268 (+)MAPPERmRatBN7.2
Rnor_6.0671,037,939 - 71,038,088NCBIRnor6.0
Rnor_5.0680,603,156 - 80,603,305UniSTSRnor5.0
RGSC_v3.4670,366,285 - 70,366,434UniSTSRGSC3.4
Celera666,645,564 - 66,645,713UniSTS
RH 3.4 Map6489.3UniSTS
Cytogenetic Map6q22UniSTS
Is Marker For: Genes:   Prkd1  




#
Reference Title
Reference Citation
1. UniSTS Pipeline RGD automated pipelines


 
Forward Primer GACTAGCCTACCCTACGCCTGA
Reverse Primer CAAGCGGATGTGGATAAGTCAC
 


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
620964Prkd1protein kinase D166772519368039002Rat
GenBank Nucleotide DH541627 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DH794588 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


1 to 10 of 26 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
9590290Uminl2Urine mineral level QTL 23.960.001urine mineral amount (VT:0015086)urine electrolyte level (CMO:0000593)63878398983783989Rat
2293088Iddm28Insulin dependent diabetes mellitus QTL 285.21blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)66304056271636266Rat
634307Bp141Blood pressure QTL 1414arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)63523041780230417Rat
634330Pia16Pristane induced arthritis QTL 163.9joint integrity trait (VT:0010548)arthritic paw count (CMO:0001460)645790088104200226Rat
1331779Rf38Renal function QTL 382.876kidney blood vessel physiology trait (VT:0100012)absolute change in renal vascular resistance (CMO:0001900)63207442872227641Rat
1354632Scl29Serum cholesterol level QTL 293.74blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)63509870971636405Rat
4145119Mcs25Mammary carcinoma susceptibility QTL 250.0001mammary gland integrity trait (VT:0010552)ratio of deaths to total study population during a period of time (CMO:0001023)610894415110548006Rat
70176Mcsm1Mammary carcinoma susceptibility modifier QTL 1mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)658632962103632962Rat
1558641Cm47Cardiac mass QTL 472.90.001heart mass (VT:0007028)heart wet weight (CMO:0000069)657730540104085867Rat
1641904Alcrsp4Alcohol response QTL 4response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)667262953112262953Rat

1 to 10 of 26 rows


Database
Acc Id
Source(s)
NCBI Gene 85421 UniSTS