Mbip (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 6 | 79,543,223 - 79,560,476 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 6 | 73,808,133 - 73,825,394 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 6 | 73,808,133 - 73,825,374 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 6 | 74,200,556 - 74,217,783 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 6 | 74,506,958 - 74,524,185 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 6 | 73,934,431 - 73,951,658 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 6 | 77,226,439 - 77,243,696 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 6 | 77,226,439 - 77,243,677 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 6 | 86,758,207 - 86,775,445 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 6 | 76,728,025 - 76,745,263 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 6 | 76,731,167 - 76,748,391 (-) | NCBI | | | | | Celera | 6 | 72,615,080 - 72,632,164 (-) | NCBI | | Celera | | | Cytogenetic Map | 6 | q23 | NCBI | | | | |
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MBIP (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 14 | 36,298,564 - 36,320,637 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 14 | 36,298,564 - 36,320,637 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 14 | 36,767,770 - 36,789,843 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 14 | 35,837,521 - 35,859,596 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 14 | 35,837,521 - 35,859,596 | NCBI | | | | | Celera | 14 | 16,631,420 - 16,653,542 (-) | NCBI | | Celera | | | Cytogenetic Map | 14 | q13.3 | NCBI | | | | | HuRef | 14 | 16,882,521 - 16,904,638 (-) | NCBI | | HuRef | | | CHM1_1 | 14 | 36,766,890 - 36,789,007 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 14 | 30,487,901 - 30,509,973 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Mbip (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 12 | 56,375,091 - 56,392,681 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 12 | 56,375,088 - 56,392,679 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 12 | 56,328,306 - 56,345,933 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 12 | 56,328,303 - 56,345,894 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 12 | 57,429,293 - 57,446,881 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 12 | 57,246,332 - 57,263,880 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 12 | 57,476,994 - 57,494,582 (-) | NCBI | | Celera | | | Cytogenetic Map | 12 | C1 | NCBI | | | | | cM Map | 12 | 24.3 | NCBI | | | | |
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Mbip (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955409 | 24,821,884 - 24,848,125 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955409 | 24,821,884 - 24,848,125 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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MBIP (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 15 | 37,613,116 - 37,635,468 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 14 | 36,829,619 - 36,851,961 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 14 | 17,052,270 - 17,074,609 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 14 | 35,231,398 - 35,253,746 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 14 | 35,231,398 - 35,253,746 (-) | Ensembl | panpan1.1 | | panPan2 | |
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MBIP (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 8 | 14,883,317 - 14,908,664 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 8 | 14,886,638 - 14,908,610 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 8 | 14,683,507 - 14,706,043 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 8 | 14,995,192 - 15,017,515 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 8 | 14,995,207 - 15,033,731 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 8 | 14,694,145 - 14,716,345 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 8 | 14,760,525 - 14,783,054 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 8 | 15,050,548 - 15,073,089 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Mbip (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024408640 | 46,810,825 - 46,833,000 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936494 | 10,313,442 - 10,338,950 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936494 | 10,315,416 - 10,338,893 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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MBIP (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 7 | 63,659,232 - 63,687,552 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 7 | 63,659,223 - 63,684,545 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 7 | 68,669,766 - 68,695,106 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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MBIP (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 24 | 13,100,914 - 13,123,017 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 24 | 13,102,520 - 13,122,977 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666053 | 2,095,680 - 2,117,775 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Mbip (Heterocephalus glaber - naked mole-rat) |
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