Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Clec14a (C-type lectin domain containing 14A) Rattus norvegicus
Analyze
Symbol: Clec14a
Name: C-type lectin domain containing 14A
Description: Predicted to have extracellular matrix binding activity and extracellular matrix protein binding activity. Predicted to be involved in cell migration involved in sprouting angiogenesis. Predicted to localize to the external side of plasma membrane. Orthologous to human CLEC14A (C-type lectin domain containing 14A); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 2,3,7,8-tetrachlorodibenzodioxine; 3,7-dihydropurine-6-thione.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: C-type lectin domain family 14 member A; C-type lectin domain family 14, member A; LOC314148; RGD1306232; similar to RIKEN cDNA 1200003C23
Orthologs:
Homo sapiens (human) : CLEC14A (C-type lectin domain containing 14A)  HGNC  Alliance
Mus musculus (house mouse) : Clec14a (C-type lectin domain family 14, member a)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Clec14a (C-type lectin domain containing 14A)
Pan paniscus (bonobo/pygmy chimpanzee) : CLEC14A (C-type lectin domain containing 14A)
Canis lupus familiaris (dog) : CLEC14A (C-type lectin domain containing 14A)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Clec14a (C-type lectin domain containing 14A)
Sus scrofa (pig) : CLEC14A (C-type lectin domain containing 14A)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0679,303,301 - 79,306,443 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0688,832,646 - 88,835,788 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4678,851,636 - 78,854,778 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1678,854,764 - 78,857,904 (-)NCBI
Celera674,652,586 - 74,655,728 (-)NCBICelera
Cytogenetic Map6q23NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Clec14a
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1306232
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.