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Gene: Ddx1 (DEAD-box helicase 1) Rattus norvegicus
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Symbol: Ddx1
Name: DEAD-box helicase 1
Description: Predicted to have several functions, including RNA binding activity; helicase activity; and transcription coregulator activity. Predicted to be involved in several processes, including nucleic acid metabolic process; positive regulation of myeloid dendritic cell cytokine production; and protein localization to cytoplasmic stress granule. Predicted to localize to several cellular components, including the cleavage body; cytoplasmic stress granule; and tRNA-splicing ligase complex. Orthologous to human DDX1 (DEAD-box helicase 1); INTERACTS WITH (+)-schisandrin B; (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 2,4-dinitrotoluene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: ATP-dependent RNA helicase DDX1; DEAD (Asp-Glu-Ala-Asp) box helicase 1; DEAD (Asp-Glu-Ala-Asp) box polypeptide 1; DEAD box protein 1; DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 1; DEAD/H-box helicase 1
Orthologs:
Homo sapiens (human) : DDX1 (DEAD-box helicase 1)  HGNC  Alliance
Mus musculus (house mouse) : Ddx1 (DEAD (Asp-Glu-Ala-Asp) box polypeptide 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ddx1 (DEAD-box helicase 1)
Pan paniscus (bonobo/pygmy chimpanzee) : DDX1 (DEAD-box helicase 1)
Canis lupus familiaris (dog) : DDX1 (DEAD-box helicase 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ddx1 (DEAD-box helicase 1)
Sus scrofa (pig) : DDX1 (DEAD-box helicase 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0638,422,892 - 38,453,762 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0647,188,697 - 47,219,567 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4636,794,602 - 36,825,473 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1636,812,356 - 36,818,005 (-)NCBI
Celera635,359,044 - 35,389,916 (-)NCBICelera
Cytogenetic Map6q15NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Ddx1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 619903
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-10-16
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.