Gene: Trim46 (tripartite motif-containing 46) Rattus norvegicus
Analyze
Symbol: Trim46
Name: tripartite motif-containing 46
Description: ENCODES a protein that exhibits zinc ion binding (inferred); INVOLVED IN negative regulation of axon extension; positive regulation of anterograde dense core granule transport; regulation of cellular protein localization; FOUND IN main axon; axon initial segment (ortholog); proximal neuron projection (ortholog); INTERACTS WITH bisphenol A; furan; (-)-epigallocatechin 3-gallate (ortholog)
AGR Description: Predicted to have zinc ion binding activity; involved in negative regulation of axon extension, positive regulation of anterograde dense core granule transport, and regulation of cellular protein localization; localizes to the main axon; orthologous to human TRIM46 (tripartite motif containing 46).
Merged Description: Predicted to have zinc ion binding activity; involved in negative regulation of axon extension, positive regulation of anterograde dense core granule transport, and regulation of cellular protein localization; localizes to the main axon; orthologous to human TRIM46 (tripartite motif containing 46); INTERACTS WITH bisphenol A; furan; (-)-epigallocatechin 3-gallate (ortholog).
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC310641; tripartite motif protein 46; tripartite motif-containing protein 46
Orthologs:
Homo sapiens (human) : TRIM46 (tripartite motif containing 46)  HGNC  Alliance
Mus musculus (house mouse) : Trim46 (tripartite motif-containing 46)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Trim46 (tripartite motif containing 46)
Pan paniscus (bonobo/pygmy chimpanzee) : TRIM46 (tripartite motif containing 46)
Canis lupus familiaris (dog) : TRIM46 (tripartite motif containing 46)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Trim46 (tripartite motif containing 46)
Sus scrofa (pig) : TRIM46 (tripartite motif containing 46)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02188,548,608 - 188,561,617 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.02207,963,152 - 207,981,078 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42181,404,410 - 181,417,003 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.12181,354,507 - 181,367,202 (-)NCBI
Celera2168,583,808 - 168,596,477 (-)NCBICelera
Cytogenetic Map2q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Trim46
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1305993
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-12
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.