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ONTOLOGY REPORT - ANNOTATIONS


Term:chromosome organization
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Accession:GO:0051276 term browser browse the term
Definition:A process that is carried out at the cellular level that results in the assembly, arrangement of constituent parts, or disassembly of chromosomes, structures composed of a very long molecule of DNA and associated proteins that carries hereditary information. This term covers covalent modifications at the molecular level as well as spatial relationships among the major components of a chromosome.
Synonyms:exact_synonym: DNA condensation;   chromosome organisation
 narrow_synonym: DNA packaging
 related_synonym: chromosome organization and biogenesis;   maintenance of genome integrity;   nuclear genome maintenance
 alt_id: GO:0006323;   GO:0007001;   GO:0051277



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chromosome organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apc APC regulator of WNT signaling pathway acts_upstream_of_or_within ISO MGI:1857951|MGI:98834 (MGI:3695814|PMID:17200209) RGD PMID:17200209 MGI:3695814 NCBI chr18:25,828,558...25,925,511
Ensembl chr18:25,864,222...25,922,696
JBrowse link
G Atr ATR serine/threonine kinase acts_upstream_of_or_within ISO MGI:2176600 (MGI:1353879|PMID:10691732) RGD PMID:10691732 MGI:1353879 NCBI chr 8:96,426,704...96,524,152
Ensembl chr 8:96,426,724...96,524,136
JBrowse link
G Blm BLM RecQ like helicase acts_upstream_of_or_within ISO MGI:1857708|MGI:2158670 (MGI:1312959|PMID:9808625), (MGI:3505667|PMID:15450411) RGD PMID:9808625 PMID:15450411 MGI:1312959 MGI:3505667 NCBI chr 1:134,409,832...134,496,073
Ensembl chr 1:134,409,857...134,484,312
JBrowse link
G Bnc1 basonuclin 1 acts_upstream_of_or_within ISO (MGI:3624199|PMID:16624857) RGD PMID:16624857 MGI:3624199 NCBI chr 1:135,917,676...135,943,333
Ensembl chr 1:135,917,687...135,943,333
JBrowse link
G Brca2 BRCA2, DNA repair associated acts_upstream_of_or_within ISO MGI:1930616|MGI:2448890 (MGI:1203345|PMID:9660919), (MGI:3833141|PMID:16859999) RGD PMID:9660919 PMID:16859999 MGI:1203345 MGI:3833141 NCBI chr12:59,492...103,789
Ensembl chr12:59,819...100,567
JBrowse link
G Cdca8 cell division cycle associated 8 involved_in ISO (PMID:15260989) RGD PMID:15260989 NCBI chr 5:137,176,414...137,198,686
Ensembl chr 5:137,176,417...137,198,629
JBrowse link
G Cenpt centromere protein T involved_in ISS
ISO
GO_REF:0000024
(PMID:21695110)
UniProt
RGD
PMID:21695110 GO_REF:0000024 NCBI chr19:33,734,684...33,741,159
Ensembl chr19:33,734,685...33,741,142
JBrowse link
G Cenpw centromere protein W involved_in ISS
ISO
GO_REF:0000024
(PMID:21695110)
UniProt
RGD
PMID:21695110 GO_REF:0000024 NCBI chr 1:27,525,324...27,530,464
Ensembl chr 1:27,525,324...27,530,464
JBrowse link
G Ctc1 CST telomere replication complex component 1 acts_upstream_of_or_within ISO MGI:5427642 (MGI:5426340|PMID:22531781) RGD PMID:22531781 MGI:5426340 NCBI chr10:53,714,614...53,735,298
Ensembl chr10:53,714,644...53,735,298
JBrowse link
G Dclre1c DNA cross-link repair 1C acts_upstream_of_or_within ISO MGI:2667614 (MGI:2447929|PMID:12504013), (MGI:3514096|PMID:12615897) RGD PMID:12504013 PMID:12615897 MGI:2447929 MGI:3514096 NCBI chr17:74,775,828...74,810,089
Ensembl chr17:74,776,935...74,809,186
JBrowse link
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit acts_upstream_of_or_within ISO MGI:2183944 (MGI:3047512|PMID:15199134) RGD PMID:15199134 MGI:3047512 NCBI chr 1:78,971,310...79,007,963
Ensembl chr 1:78,996,390...79,007,963
JBrowse link
G Gem GTP binding protein overexpressed in skeletal muscle involved_in ISO (PMID:22964304) RGD PMID:22964304 NCBI chr 5:25,214,309...25,225,222
Ensembl chr 5:25,214,309...25,225,222
JBrowse link
G H2bc1 H2B clustered histone 1 acts_upstream_of_or_within ISO (MGI:3702345|PMID:17261847) RGD PMID:17261847 MGI:3702345 NCBI chr17:41,172,041...41,172,510 JBrowse link
G Itpa inosine triphosphatase acts_upstream_of_or_within ISO MGI:4942407 (MGI:5009783|PMID:20081199) RGD PMID:20081199 MGI:5009783 NCBI chr 3:117,885,464...117,897,247
Ensembl chr 3:117,885,099...117,897,249
JBrowse link
G Lig4 DNA ligase 4 acts_upstream_of_or_within ISO MGI:894697 (MGI:3043875|PMID:15175260) RGD PMID:15175260 MGI:3043875 NCBI chr16:79,518,393...79,526,956
Ensembl chr16:79,518,312...79,527,040
JBrowse link
G Mre11 MRE11 homolog, double strand break repair nuclease acts_upstream_of_or_within ISO MGI:3027036 (MGI:2683367|PMID:14690604) RGD PMID:14690604 MGI:2683367 NCBI chr 8:11,618,876...11,680,451
Ensembl chr 8:11,632,354...11,678,279
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor involved_in ISO
ISS
(PMID:10962037)
GO_REF:0000024
RGD
UniProt
PMID:10962037 GO_REF:0000024 NCBI chr 7:93,593,705...93,598,633
Ensembl chr 7:93,593,705...93,598,630
JBrowse link
G Nudt16 nudix hydrolase 16 acts_upstream_of_or_within ISO MGI:96622 (MGI:5009783|PMID:20081199) RGD PMID:20081199 MGI:5009783 NCBI chr 8:105,739,927...105,741,982
Ensembl chr 8:105,739,623...105,741,998
JBrowse link
G Pelo pelota mRNA surveillance and ribosome rescue factor acts_upstream_of_or_within ISO MGI:2450933 (MGI:2450001|PMID:12556505) RGD PMID:12556505 MGI:2450001 NCBI chr 2:46,797,853...46,799,621
Ensembl chr 2:46,797,853...46,799,746
JBrowse link
G Pot1 protection of telomeres 1 acts_upstream_of_or_within ISO MGI:1920086|MGI:98834 (MGI:3692019|PMID:17053789) RGD PMID:17053789 MGI:3692019 NCBI chr 4:54,205,330...54,263,137
Ensembl chr 4:54,205,332...54,263,042
JBrowse link
G Pum2 pumilio RNA-binding family member 2 involved_in ISO (MGI:6304097|PMID:30735131) RGD PMID:30735131 MGI:6304097 NCBI chr 6:31,462,879...31,542,976
Ensembl chr 6:31,462,872...31,542,976
JBrowse link
G Rad50 RAD50 double strand break repair protein acts_upstream_of_or_within ISO MGI:2387852|MGI:3832533 (MGI:3831647|PMID:19001091) RGD PMID:19001091 MGI:3831647 NCBI chr10:37,809,353...37,861,309
Ensembl chr10:37,808,726...37,861,396
JBrowse link
G Rad51d RAD51 paralog D acts_upstream_of_or_within ISO MGI:2386281 (MGI:3574680|PMID:15781618), (MGI:5050390|PMID:20813759) RGD PMID:15781618 PMID:20813759 MGI:3574680 MGI:5050390 NCBI chr10:67,805,720...67,824,452
Ensembl chr10:67,740,712...67,824,434
JBrowse link
G Rad54l RAD54 like acts_upstream_of_or_within ISO MGI:1335098 (MGI:3043875|PMID:15175260) RGD PMID:15175260 MGI:3043875 NCBI chr 5:129,575,431...129,605,100
Ensembl chr 5:129,575,378...129,605,070
JBrowse link
G Rpa1 replication protein A1 acts_upstream_of_or_within ISO MGI:3582609 (MGI:3581950|PMID:15965476) RGD PMID:15965476 MGI:3581950 NCBI chr10:60,148,869...60,199,999
Ensembl chr10:60,148,793...60,199,949
JBrowse link
G Sfpq splicing factor proline and glutamine rich acts_upstream_of_or_within ISO (MGI:5050390|PMID:20813759) RGD PMID:20813759 MGI:5050390 NCBI chr 5:139,338,034...139,353,476
Ensembl chr 5:139,338,075...139,353,472
JBrowse link
G Smc3 structural maintenance of chromosomes 3 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:252,601,422...252,644,522
Ensembl chr 1:252,601,753...252,644,522
JBrowse link
G Tp53 tumor protein p53 acts_upstream_of_or_within ISO MGI:1920086|MGI:2141503|MGI:88039 (MGI:3692019|PMID:17053789), (MGI:3695814|PMID:17200209) RGD PMID:17053789 PMID:17200209 MGI:3692019 MGI:3695814 NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524
JBrowse link
G Yy1 YY1 transcription factor involved_in ISO (MGI:5009388|PMID:18026119) RGD PMID:18026119 MGI:5009388 NCBI chr 6:127,706,739...127,731,907
Ensembl chr 6:127,707,596...127,732,747
JBrowse link
G Zfp830 zinc finger protein 830 acts_upstream_of_or_within ISO MGI:4950703 (MGI:5428139|PMID:23213458) RGD PMID:23213458 MGI:5428139 NCBI chr10:67,701,340...67,702,804
Ensembl chr10:67,701,073...67,704,523
JBrowse link
G Zmpste24 zinc metallopeptidase STE24 acts_upstream_of_or_within ISO MGI:2180033 (MGI:3583382|PMID:15980864) RGD PMID:15980864 MGI:3583382 NCBI chr 5:134,627,218...134,660,360
Ensembl chr 5:134,627,229...134,660,110
JBrowse link
apoptotic chromosome condensation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acin1 apoptotic chromatin condensation inducer 1 involved_in ISO (PMID:10490026) RGD PMID:10490026 NCBI chr15:28,102,112...28,147,001
Ensembl chr15:28,102,112...28,147,001
JBrowse link
G Dffb DNA fragmentation factor subunit beta involved_in ISO
IEA
(PMID:10959840)
GO_REF:0000107
RGD
Ensembl
PMID:10959840 GO_REF:0000107 NCBI chr 5:164,522,446...164,534,733
Ensembl chr 5:164,522,463...164,534,628
JBrowse link
G Ern2 endoplasmic reticulum to nucleus signaling 2 involved_in ISO (PMID:11175748) RGD PMID:11175748 NCBI chr 1:176,726,454...176,743,289
Ensembl chr 1:176,726,454...176,743,289
JBrowse link
G Gper1 G protein-coupled estrogen receptor 1 involved_in IDA PMID:23907461 UniProt PMID:23907461 RGD:8553942 NCBI chr12:15,217,217...15,222,679
Ensembl chr12:15,217,442...15,221,889
JBrowse link
G Top2a DNA topoisomerase II alpha involved_in IBA
ISO
IEA
PMID:21873635
(PMID:10959840)
GO_REF:0000107
RGD
Ensembl
PMID:10959840 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr10:83,946,186...83,975,694
Ensembl chr10:83,945,735...83,976,874
JBrowse link
attachment of mitotic spindle microtubules to kinetochore term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdt1 chromatin licensing and DNA replication factor 1 involved_in ISO (PMID:22581055) RGD PMID:22581055 NCBI chr19:50,620,713...50,625,659
Ensembl chr19:50,620,713...50,625,659
JBrowse link
G Cenpc centromere protein C involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:21,988,067...22,046,732
Ensembl chr14:21,988,144...22,055,476
JBrowse link
G Cenpe centromere protein E involved_in ISO (PMID:15843429) RGD PMID:15843429 NCBI chr 2:223,637,035...223,695,692
Ensembl chr 2:223,636,998...223,695,669
JBrowse link
G Champ1 chromosome alignment maintaining phosphoprotein 1 involved_in ISO
IBA
(PMID:21063390)
PMID:21873635
RGD PMID:21063390 PMID:21873635 RGD:13792537 NCBI chr16:75,733,958...75,744,977
Ensembl chr16:75,733,805...75,744,984
JBrowse link
G Kif2c kinesin family member 2C involved_in ISO
ISS
IEA
(PMID:23891108)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:23891108 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:130,637,347...130,662,680
Ensembl chr 5:130,637,347...130,662,637
JBrowse link
G Mad1l1 mitotic arrest deficient 1 like 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:14,320,892...14,630,750
Ensembl chr12:14,320,892...14,630,703
JBrowse link
G Mapre1 microtubule-associated protein, RP/EB family, member 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:23001180)
UniProt
RGD
PMID:23001180 GO_REF:0000024 NCBI chr 3:142,218,846...142,246,990
Ensembl chr 3:142,212,955...142,246,983
JBrowse link
G Mis12 MIS12 kinetochore complex component involved_in ISO
ISS
(PMID:23891108)
GO_REF:0000024
RGD
UniProt
PMID:23891108 GO_REF:0000024 NCBI chr10:55,739,590...55,747,915
Ensembl chr10:55,739,564...55,751,068
JBrowse link
G Ndc80 NDC80 kinetochore complex component involved_in ISO (PMID:23891108), (PMID:25743205)
(PMID:23891108), (PMID:25743205), (PMID:30409912)
RGD PMID:23891108 PMID:25743205 PMID:30409912 NCBI chr 9:111,407,191...111,440,921
Ensembl chr 9:111,407,191...111,440,924
JBrowse link
G Nuf2 NUF2 component of NDC80 kinetochore complex involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:81,693,675...81,722,765
Ensembl chr13:81,693,598...81,722,766
JBrowse link
G Seh1l SEH1-like nucleoporin involved_in ISO (PMID:17363900) RGD PMID:17363900
CENP-A containing chromatin assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cenpp centromere protein P involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr17:15,013,869...15,189,312
Ensembl chr17:15,014,058...15,189,304
JBrowse link
G Hjurp Holliday junction recognition protein involved_in ISO
IBA
(PMID:19410544), (PMID:19410545)
PMID:21873635
RGD PMID:19410544 PMID:19410545 PMID:21873635 RGD:13792537 NCBI chr 9:88,853,379...88,867,730
Ensembl chr 9:88,853,386...88,867,728
JBrowse link
G Itgb3bp integrin subunit beta 3 binding protein involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 5:114,460,217...114,525,538
Ensembl chr 5:114,460,221...114,525,704
JBrowse link
G Mis18a MIS18 kinetochore protein A acts_upstream_of_or_within
involved_in
ISO
IBA
MGI:5441069 (MGI:5438906|PMID:22516971)
PMID:21873635
RGD PMID:22516971 PMID:21873635 MGI:5438906, RGD:13792537 NCBI chr11:29,968,030...29,981,058
Ensembl chr11:29,967,701...29,981,062
JBrowse link
G Nasp nuclear autoantigenic sperm protein involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:130,057,363...130,083,003
Ensembl chr 5:130,057,363...130,082,928
JBrowse link
G Oip5 Opa interacting protein 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:106,593,746...106,603,281
Ensembl chr 3:106,593,760...106,603,250
JBrowse link
centromere complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cenpi centromere protein I involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr  X:97,515,919...97,567,671
Ensembl chr  X:97,515,972...97,567,657
JBrowse link
G Cenpo centromere protein O involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 6:27,203,642...27,218,394
Ensembl chr 6:27,188,537...27,218,314
JBrowse link
G Cenpv centromere protein V involved_in ISO (PMID:18772885) RGD PMID:18772885 NCBI chr10:47,214,479...47,228,552
Ensembl chr10:47,214,490...47,228,761
JBrowse link
chiasma assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brip1 BRCA1 interacting helicase 1 acts_upstream_of_or_within ISO MGI:4129733 (MGI:5700253|PMID:26490168) RGD PMID:26490168 MGI:5700253 NCBI chr10:70,907,266...71,031,502
Ensembl chr10:70,907,371...71,030,324
JBrowse link
G Ccnb1ip1 cyclin B1 interacting protein 1 acts_upstream_of_or_within
involved_in
ISO MGI:3050548 (MGI:3757893|PMID:17784788)
(MGI:5545848|PMID:24390283)
RGD PMID:17784788 PMID:24390283 MGI:3757893 MGI:5545848 NCBI chr15:24,014,905...24,031,357
Ensembl chr15:24,014,908...24,028,475
JBrowse link
G Msh5 mutS homolog 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:3,773,867...3,793,337
Ensembl chr20:3,776,942...3,793,336
JBrowse link
G Rnf212 ring finger protein 212 involved_in ISO (MGI:5545848|PMID:24390283) RGD PMID:24390283 MGI:5545848 NCBI chr14:949,397...988,377
Ensembl chr14:949,448...987,831
JBrowse link
G Sycp1 synaptonemal complex protein 1 involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
PMID:21873635
MGI:109542 (MGI:5315075|PMID:22164254)
GO_REF:0000107
RGD
Ensembl
PMID:22164254 PMID:21873635 GO_REF:0000107 MGI:5315075, RGD:13792537 NCBI chr 2:190,296,688...190,456,687
Ensembl chr 2:190,296,954...190,456,737
JBrowse link
G Sycp3 synaptonemal complex protein 3 involved_in
acts_upstream_of_or_within
ISO (MGI:2179610|PMID:12004129)
MGI:105931 (MGI:5315075|PMID:22164254)
RGD PMID:12004129 PMID:22164254 MGI:2179610 MGI:5315075 NCBI chr 7:22,874,055...22,888,512
Ensembl chr 7:22,874,055...22,888,511
JBrowse link
G Tex11 testis expressed 11 acts_upstream_of_or_within ISO MGI:3526163 (MGI:3774244|PMID:18316482) RGD PMID:18316482 MGI:3774244 NCBI chr  X:65,932,904...66,196,525
Ensembl chr  X:65,932,988...66,196,187
JBrowse link
G Ube2b ubiquitin-conjugating enzyme E2B acts_upstream_of_or_within ISO MGI:2183933 (MGI:2450033|PMID:12556476) RGD PMID:12556476 MGI:2450033 NCBI chr10:36,248,434...36,263,379
Ensembl chr10:36,248,438...36,264,665
JBrowse link
chromatin assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdan1 codanin 1 involved_in ISO (PMID:22407294) RGD PMID:22407294 NCBI chr 3:107,675,147...107,689,811
Ensembl chr 3:107,673,645...107,689,773
JBrowse link
G Chaf1a chromatin assembly factor 1 subunit A involved_in ISO (PMID:8858152) RGD PMID:8858152 NCBI chr 9:873,953...900,701
Ensembl chr 9:874,051...900,654
JBrowse link
G Chaf1b chromatin assembly factor 1 subunit B involved_in ISO (PMID:8858152) RGD PMID:8858152 NCBI chr11:33,200,894...33,221,076
Ensembl chr11:33,200,981...33,221,070
JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO (MGI:3807115|PMID:18650382) RGD PMID:18650382 MGI:3807115 NCBI chr12:5,973,062...5,978,565
Ensembl chr12:5,901,586...5,978,565
JBrowse link
G Noc2l NOC2-like nucleolar associated transcriptional repressor involved_in ISO (PMID:16322561) RGD PMID:16322561 NCBI chr 5:166,820,075...166,831,951
Ensembl chr 5:166,820,161...166,831,949
JBrowse link
G Rbbp4 RB binding protein 4, chromatin remodeling factor involved_in ISO (PMID:8858152) RGD PMID:8858152 NCBI chr 5:141,655,863...141,675,157
Ensembl chr 5:141,638,421...141,675,284
JBrowse link
G Rsf1 remodeling and spacing factor 1 involved_in ISO (PMID:11691835) RGD PMID:11691835 NCBI chr 1:151,892,055...152,015,089
Ensembl chr 1:151,892,434...152,009,051
JBrowse link
G Smarca5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 involved_in ISO (PMID:11691835) RGD PMID:11691835 NCBI chr19:27,271,918...27,304,594
Ensembl chr19:27,271,148...27,304,594
JBrowse link
G Tp53 tumor protein p53 involved_in ISO (PMID:16322561) RGD PMID:16322561 NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524
JBrowse link
chromatin looping term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctcf CCCTC-binding factor involved_in ISO (PMID:18654629) RGD PMID:18654629 NCBI chr19:33,521,726...33,571,124
Ensembl chr19:33,529,319...33,571,123
JBrowse link
chromatin organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07053884.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 3:126,570,653...126,570,904 JBrowse link
G Abraxas1 abraxas 1, BRCA1 A complex subunit involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr14:8,796,281...8,810,625
Ensembl chr14:8,796,266...8,810,622
JBrowse link
G AC118841.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 5:68,280,970...68,281,345 JBrowse link
G Apbb1 amyloid beta precursor protein binding family B member 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:159,896,889...159,920,505
Ensembl chr 1:159,896,880...159,920,627
JBrowse link
G Arid1a AT-rich interaction domain 1A acts_upstream_of_or_within ISO PR:Q6DIC0 (MGI:1934781|PMID:11318604) RGD PMID:11318604 MGI:1934781 NCBI chr 5:145,908,181...145,981,609
Ensembl chr 5:145,908,181...145,985,564
JBrowse link
G Ash1l ASH1 like histone lysine methyltransferase involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:174,346,267...174,483,057
Ensembl chr 2:174,346,150...174,483,055
JBrowse link
G Atad2 ATPase family, AAA domain containing 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 7:89,634,123...89,676,738
Ensembl chr 7:89,634,123...89,676,738
JBrowse link
G Atxn7l3 ataxin 7-like 3 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:87,242,843...87,250,186
Ensembl chr10:87,243,587...87,250,620
JBrowse link
G Babam1 BRISC and BRCA1 A complex member 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr16:18,068,830...18,074,938
Ensembl chr16:18,068,884...18,074,923
JBrowse link
G Babam2 BRISC and BRCA1 A complex member 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 6:24,369,021...24,833,335
Ensembl chr 6:24,369,022...24,833,951
JBrowse link
G Bag6 BAG cochaperone 6 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr20:3,675,938...3,690,414
Ensembl chr20:3,675,938...3,688,657
JBrowse link
G Banf1 BAF nuclear assembly factor 1 involved_in ISO
ISS
(PMID:28841419)
GO_REF:0000024
RGD
UniProt
PMID:28841419 GO_REF:0000024 NCBI chr 1:202,672,170...202,674,215
Ensembl chr 1:202,671,305...202,674,188
JBrowse link
G Bap1 Brca1 associated protein 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr16:6,446,709...6,455,535
Ensembl chr16:6,446,709...6,455,535
JBrowse link
G Baz1b bromodomain adjacent to zinc finger domain, 1B acts_upstream_of_or_within ISO (MGI:2179578|PMID:11980720) RGD PMID:11980720 MGI:2179578 NCBI chr12:21,431,985...21,489,956
Ensembl chr12:21,431,985...21,490,426
JBrowse link
G Brcc3 BRCA1/BRCA2-containing complex, subunit 3 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 9:1,986,942...1,989,484
Ensembl chr 9:1,986,575...1,991,080
JBrowse link
G Carm1 coactivator-associated arginine methyltransferase 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 8:20,097,262...20,141,950
Ensembl chr 8:20,097,254...20,147,689
JBrowse link
G Cbx1 chromobox 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:81,770,307...81,789,981
Ensembl chr10:81,770,342...81,791,096
JBrowse link
G Cbx3 chromobox 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:80,545,450...80,559,284
Ensembl chr 4:80,546,010...80,559,283
JBrowse link
G Cbx5 chromobox 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:134,333,165...134,376,102
Ensembl chr 7:134,331,335...134,375,022
JBrowse link
G Cbx7 chromobox 7 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:111,460,656...111,479,231
Ensembl chr 7:111,460,656...111,477,973
JBrowse link
G Cdan1 codanin 1 acts_upstream_of_or_within
involved_in
ISO
IBA
(PMID:21364188)
PMID:21873635
RGD PMID:21364188 PMID:21873635 RGD:13792537 NCBI chr 3:107,675,147...107,689,811
Ensembl chr 3:107,673,645...107,689,773
JBrowse link
G Chd3 chromodomain helicase DNA binding protein 3 acts_upstream_of_or_within ISO (MGI:1333986|PMID:10204490) RGD PMID:10204490 MGI:1333986 NCBI chr10:54,063,629...54,090,030
Ensembl chr10:54,063,629...54,090,047
JBrowse link
G Dapk3 death-associated protein kinase 3 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:8,524,182...8,532,552
Ensembl chr 7:8,524,183...8,532,558
JBrowse link
G Daxx death-domain associated protein involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr20:4,970,090...4,976,145
Ensembl chr20:4,970,092...4,975,843
JBrowse link
G Dek DEK proto-oncogene involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr17:17,580,804...17,602,825
Ensembl chr17:17,580,843...17,602,808
JBrowse link
G Dnajc2 DnaJ heat shock protein family (Hsp40) member C2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:13,270,239...13,297,438
Ensembl chr 4:13,270,191...13,297,431
JBrowse link
G Dppa3 developmental pluripotency-associated 3 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:155,851,461...155,854,845
Ensembl chr 4:155,815,296...155,854,861
JBrowse link
G Dpy30 dpy-30 histone methyltransferase complex regulatory subunit involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 6:21,120,947...21,141,720
Ensembl chr 6:21,120,947...21,141,432
JBrowse link
G Ehmt1 euchromatic histone lysine methyltransferase 1 involved_in ISO (PMID:12004135) RGD PMID:12004135 NCBI chr 3:7,580,680...7,729,046
Ensembl chr 3:7,580,683...7,729,007
JBrowse link
G Eny2 ENY2, transcription and export complex 2 subunit involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:75,581,215...75,605,903
Ensembl chr 7:75,581,240...75,605,897
JBrowse link
G Fam50a family with sequence similarity 50, member A involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:152,095,245...152,102,362
Ensembl chr  X:152,095,245...152,102,362
JBrowse link
G Fam50b family with sequence similarity 50, member B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:30,174,431...30,193,627
Ensembl chr17:30,174,411...30,193,615
JBrowse link
G Foxa2 forkhead box A2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:135,470,123...135,474,326
Ensembl chr 3:135,470,131...135,474,326
JBrowse link
G Foxa3 forkhead box A3 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:78,662,067...78,672,321
Ensembl chr 1:78,662,431...78,672,155
JBrowse link
G Ftx FTX transcript, XIST regulator acts_upstream_of_or_within ISO (MGI:4936795|PMID:21118898) RGD PMID:21118898 MGI:4936795 NCBI chr  X:68,588,349...68,630,338 JBrowse link
G Gatad1 GATA zinc finger domain containing 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:30,507,530...30,519,109
Ensembl chr 4:30,507,538...30,519,107
JBrowse link
G Gpx4 glutathione peroxidase 4 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
(MGI:1934492|PMID:11344099)
UniProt
RGD
PMID:11344099 GO_REF:0000024 MGI:1934492 NCBI chr 7:9,650,186...9,652,982
Ensembl chr 7:9,650,185...9,652,982
JBrowse link
G H1f2 H1.2 linker histone, cluster member acts_upstream_of_or_within ISO MGI:2665852 (MGI:2664444|PMID:12808097) RGD PMID:12808097 MGI:2664444 NCBI chr17:41,391,106...41,392,611
Ensembl chr17:41,388,477...41,392,635
JBrowse link
G H1f4 H1.4 linker histone, cluster member acts_upstream_of_or_within ISO MGI:2665857 (MGI:2664444|PMID:12808097) RGD PMID:12808097 MGI:2664444 NCBI chr17:41,486,634...41,487,293
Ensembl chr17:41,486,560...41,487,403
JBrowse link
G H1f5 H1.5 linker histone, cluster member involved_in ISO (PMID:22956909) RGD PMID:22956909 NCBI chr17:42,726,189...42,726,857
Ensembl chr17:42,726,127...42,769,160
JBrowse link
G H2ac1 H2A clustered histone 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5569674|PMID:24506885)
GO_REF:0000107
RGD
Ensembl
PMID:24506885 GO_REF:0000107 MGI:5569674 NCBI chr17:41,171,384...41,171,776
Ensembl chr17:41,135,489...41,172,022
JBrowse link
G H2bc1 H2B clustered histone 1 acts_upstream_of_or_within ISO (MGI:5569674|PMID:24506885) RGD PMID:24506885 MGI:5569674 NCBI chr17:41,172,041...41,172,510 JBrowse link
G H4f3 H1.3 linker histone, cluster member acts_upstream_of_or_within ISO MGI:2666743 (MGI:2664444|PMID:12808097) RGD PMID:12808097 MGI:2664444 NCBI chr17:41,528,576...41,554,586
Ensembl chr17:41,529,667...41,552,334
JBrowse link
G Hdac1l histone deacetylase 1-like involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 9:80,453,139...80,454,593
Ensembl chr 9:80,453,139...80,454,593
JBrowse link
G Hdac3 histone deacetylase 3 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr18:29,770,637...29,789,850
Ensembl chr18:29,770,636...29,793,856
JBrowse link
G Hdac5 histone deacetylase 5 TAS RGD PMID:12896970 RGD:1304416 NCBI chr10:87,152,978...87,187,921
Ensembl chr10:87,152,978...87,188,235
JBrowse link
G Hdac7 histone deacetylase 7 involved_in TAS
IEA
PMID:12711221
GO_REF:0000043
UniProt PMID:12711221 GO_REF:0000043, RGD:8553516 NCBI chr 7:128,923,918...128,962,025
Ensembl chr 7:128,923,920...128,962,072
JBrowse link
G Hdac8 histone deacetylase 8 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:67,385,288...67,593,014
Ensembl chr  X:67,385,289...67,592,923
JBrowse link
G Hdac9 histone deacetylase 9 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 6:50,762,074...51,624,311
Ensembl chr 6:50,763,590...51,625,333
JBrowse link
G Hmgn1 high mobility group nucleosome binding domain 1 acts_upstream_of_or_within ISO MGI:3590648 (MGI:3590574|PMID:12660172) RGD PMID:12660172 MGI:3590574 NCBI chr11:35,422,328...35,428,247
Ensembl chr11:35,422,328...35,428,254
JBrowse link
G Hmgn2 high mobility group nucleosomal binding domain 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:146,192,126...146,195,580
Ensembl chr 5:146,192,126...146,195,521
JBrowse link
G Hmgn3 high mobility group nucleosomal binding domain 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:84,022,493...84,059,329
Ensembl chr 8:84,022,495...84,062,976
JBrowse link
G Hmgn4 high mobility group nucleosomal binding domain 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:99,990,743...99,991,093
Ensembl chr 3:99,990,743...99,991,003
JBrowse link
G Hmgn5 high mobility group nucleosome binding domain 5 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:5588022 (MGI:5578301|PMID:24392144)
RGD PMID:24392144 PMID:21873635 MGI:5578301, RGD:13792537 NCBI chr  X:74,085,871...74,094,488 JBrowse link
G Hmgn5b high mobility group nucleosome binding domain 5B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Ing1 inhibitor of growth family, member 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr16:77,937,276...77,945,320
Ensembl chr16:77,937,279...77,946,264
JBrowse link
G Ing2 inhibitor of growth family, member 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr16:44,573,592...44,584,180
Ensembl chr16:44,575,597...44,583,482
JBrowse link
G Ing3 inhibitor of growth family, member 3 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:50,477,954...50,505,168
Ensembl chr 4:50,477,962...50,503,715
JBrowse link
G Ing5 inhibitor of growth family, member 5 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 9:94,326,919...94,344,220
Ensembl chr 9:94,326,548...94,344,220
JBrowse link
G Jak2 Janus kinase 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:226,995,334...227,054,381
Ensembl chr 1:226,995,334...227,054,189
JBrowse link
G Jmjd6 jumonji domain containing 6, arginine demethylase and lysine hydroxylase involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:102,041,131...102,047,182
Ensembl chr10:102,041,120...102,047,182
JBrowse link
G Kansl2 KAT8 regulatory NSL complex subunit 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:129,669,031...129,685,828
Ensembl chr 7:129,669,031...129,685,725
JBrowse link
G Kansl3 KAT8 regulatory NSL complex subunit 3 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 9:38,562,170...38,605,757
Ensembl chr 9:38,562,177...38,605,692
JBrowse link
G Kat7 lysine acetyltransferase 7 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:80,221,519...80,255,590
Ensembl chr10:80,221,524...80,255,567
JBrowse link
G Kat8 lysine acetyltransferase 8 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:182,524,355...182,536,638
Ensembl chr 1:182,515,327...182,536,633
JBrowse link
G Kdm1a lysine demethylase 1A involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:148,782,976...148,838,319
Ensembl chr 5:148,782,976...148,838,319
JBrowse link
G Kdm2a lysine demethylase 2A involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:201,612,427...201,682,359
Ensembl chr 1:201,612,453...201,680,787
JBrowse link
G Kdm2b lysine demethylase 2B involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr12:33,566,530...33,701,366
Ensembl chr12:33,574,657...33,701,355
JBrowse link
G Kdm3a lysine demethylase 3A involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:103,630,907...103,675,073
Ensembl chr 4:103,630,908...103,675,073
JBrowse link
G Kdm5c lysine demethylase 5C involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:21,345,459...21,387,045
Ensembl chr  X:21,345,481...21,381,870
JBrowse link
G Kdm8 lysine demethylase 8 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:180,013,969...180,028,829
Ensembl chr 1:180,020,656...180,028,841
JBrowse link
G Kmt2a lysine methyltransferase 2A involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 8:45,116,771...45,193,320
Ensembl chr 8:45,118,814...45,193,181
JBrowse link
G Kmt5b lysine methyltransferase 5B involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:201,000,444...201,049,819
Ensembl chr 1:201,000,444...201,049,819
JBrowse link
G Kmt5c lysine methyltransferase 5C involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:69,099,531...69,107,145
Ensembl chr 1:69,099,539...69,107,145
JBrowse link
G L3mbtl1 L3MBTL histone methyl-lysine binding protein 1 involved_in ISO (PMID:17540172) RGD PMID:17540172 NCBI chr 3:151,597,903...151,633,657
Ensembl chr 3:151,602,980...151,631,233
JBrowse link
G L3mbtl2 L3MBTL histone methyl-lysine binding protein 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:113,186,303...113,209,706
Ensembl chr 7:113,186,370...113,207,489
JBrowse link
G L3mbtl3 L3MBTL histone methyl-lysine binding protein 3 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:18,988,763...19,089,247
Ensembl chr 1:18,990,618...19,089,263
JBrowse link
G L3mbtl4 L3MBTL histone methyl-lysine binding protein 4 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 9:108,295,004...108,747,879
Ensembl chr 9:108,329,669...108,747,774
JBrowse link
G Lamc1 laminin subunit gamma 1 involved_in ISO MGI:2683482 (MGI:5828725|PMID:27234308) RGD PMID:27234308 MGI:5828725 NCBI chr13:65,374,372...65,501,492
Ensembl chr13:65,374,372...65,501,492
JBrowse link
G LOC100360453 chromobox homolog 3-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:68,280,558...68,281,429
Ensembl chr 5:68,280,970...68,281,345
JBrowse link
G LOC100363319 high mobility group nucleosomal binding domain 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:83,520,046...83,520,312
Ensembl chr 7:83,520,046...83,520,312
JBrowse link
G LOC688980 hypothetical protein LOC688980 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:162,337,285...162,338,246
Ensembl chr 4:162,337,682...162,338,233
JBrowse link
G Lrwd1 leucine-rich repeats and WD repeat domain containing 1 involved_in ISO
IBA
(PMID:20932478)
PMID:21873635
RGD PMID:20932478 PMID:21873635 RGD:13792537 NCBI chr12:20,530,072...20,543,078
Ensembl chr12:20,530,012...20,549,536
JBrowse link
G Mbtd1 mbt domain containing 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:78,839,140...78,895,413
Ensembl chr10:78,839,036...78,893,720
JBrowse link
G Mettl23 methyltransferase like 23 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:102,047,090...102,053,379
Ensembl chr10:102,047,314...102,051,977
JBrowse link
G Morf4l1 mortality factor 4 like 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 8:90,642,988...90,664,518
Ensembl chr 8:90,642,988...90,664,519
JBrowse link
G Morf4l2 mortality factor 4 like 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:100,082,562...100,093,658
Ensembl chr  X:100,082,404...100,093,728
JBrowse link
G Mos MOS proto-oncogene, serine/threonine kinase involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:80462|PMID:8631259)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:8631259 GO_REF:0000024 GO_REF:0000107 MGI:80462 NCBI chr 5:16,859,957...16,861,264
Ensembl chr 5:16,859,957...16,861,264
JBrowse link
G Msl3l2 male-specific lethal 3-like 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr20:35,468,877...35,477,037
Ensembl chr20:35,468,888...35,477,757
JBrowse link
G Mtf2 metal response element binding transcription factor 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:1,639,256...1,683,513
Ensembl chr14:1,640,746...1,683,524
JBrowse link
G Ncor1 nuclear receptor co-repressor 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:46,999,536...47,142,294
Ensembl chr10:46,999,536...47,141,032
JBrowse link
G Nsd1 nuclear receptor binding SET domain protein 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr17:9,311,963...9,426,373
Ensembl chr17:9,315,237...9,425,358
JBrowse link
G Nsd2 nuclear receptor binding SET domain protein 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr14:76,833,194...76,911,304
Ensembl chr14:76,835,637...76,913,641
JBrowse link
G Nsd3 nuclear receptor binding SET domain protein 3 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr16:66,354,030...66,466,202
Ensembl chr16:66,358,973...66,465,423
JBrowse link
G Nucks1 nuclear casein kinase and cyclin-dependent kinase substrate 1 involved_in ISO (MGI:5576396|PMID:24931609), (MGI:5695791|PMID:26205492) RGD PMID:24931609 PMID:26205492 MGI:5576396 MGI:5695791 NCBI chr13:43,345,091...43,374,316
Ensembl chr13:43,345,115...43,370,229
JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:66,771,278...66,816,148
Ensembl chr  X:66,771,349...66,816,146
JBrowse link
G Padi4 peptidyl arginine deiminase 4 involved_in ISS
ISO
GO_REF:0000024
(MGI:5545819|PMID:24463520)
UniProt
RGD
PMID:24463520 GO_REF:0000024 MGI:5545819 NCBI chr 5:153,041,351...153,074,412
Ensembl chr 5:153,041,352...153,074,362
JBrowse link
G Phf1 PHD finger protein 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:5,017,765...5,022,872
Ensembl chr20:5,017,893...5,022,871
JBrowse link
G Phf19 PHD finger protein 19 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:18,175,281...18,197,289
Ensembl chr 3:18,175,282...18,196,405
JBrowse link
G Phf8 PHD finger protein 8 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:20,524,103...20,623,459
Ensembl chr  X:20,524,558...20,623,410
JBrowse link
G Pkn1 protein kinase N1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr19:24,442,130...24,470,107
Ensembl chr19:24,442,122...24,470,107
JBrowse link
G Prdm9 PR/SET domain 9 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:56,505,579...56,525,726
Ensembl chr 1:56,505,579...56,525,652
JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:54,240,298...54,275,978
Ensembl chr 2:54,240,137...54,275,978
JBrowse link
G Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:119,807,992...119,879,987
Ensembl chr 5:119,813,226...119,879,543
JBrowse link
G Prkcb protein kinase C, beta involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:176,832,173...177,163,539
Ensembl chr 1:176,832,226...177,163,536
JBrowse link
G Pwwp3a PWWP domain containing 3A, DNA repair factor involved_in IBA
ISS
ISO
PMID:21873635
GO_REF:0000024
(PMID:20347427)
UniProt
RGD
PMID:20347427 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 7:9,465,180...9,482,053
Ensembl chr 7:9,465,195...9,481,966
JBrowse link
G Rag1 recombination activating 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:87,917,061...87,928,158
Ensembl chr 3:87,917,004...87,928,291
JBrowse link
G Rbl1 RB transcriptional corepressor like 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:145,806,160...145,869,434
Ensembl chr 3:145,807,095...145,869,330
JBrowse link
G Rbl2 RB transcriptional corepressor like 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr19:15,876,852...15,923,632
Ensembl chr19:15,876,853...15,923,572
JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit involved_in ISO (MGI:6161518|PMID:29813070) RGD PMID:29813070 MGI:6161518 NCBI chr 1:202,925,001...202,935,484
Ensembl chr 1:202,924,945...202,935,484
JBrowse link
G RGD1310212 similar to KIAA1111-like protein involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:12,194,437...12,200,509
Ensembl chr 7:12,194,441...12,200,446
JBrowse link
G Ring1 ring finger protein 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr20:4,830,120...4,833,623
Ensembl chr20:4,830,053...4,833,620
JBrowse link
G Riox1 ribosomal oxygenase 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 6:103,579,642...103,582,260
Ensembl chr 6:103,579,642...103,582,250
JBrowse link
G Rnf168 ring finger protein 168 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr11:68,486,313...68,508,296
Ensembl chr11:68,486,321...68,508,277
JBrowse link
G Rnf20 ring finger protein 20 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:63,976,063...64,001,754
Ensembl chr 5:63,976,045...64,001,754
JBrowse link
G Rnf40 ring finger protein 40 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:182,202,475...182,217,899
Ensembl chr 1:182,202,600...182,217,241
JBrowse link
G Rnf8 ring finger protein 8 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr20:7,682,258...7,710,448
Ensembl chr20:7,682,322...7,708,491
JBrowse link
G Satb1 SATB homeobox 1 acts_upstream_of_or_within ISO (MGI:2658695|PMID:12692553) RGD PMID:12692553 MGI:2658695 NCBI chr 9:4,677,817...4,773,061
Ensembl chr 9:4,680,920...4,753,251
JBrowse link
G Setd1a SET domain containing 1A, histone lysine methyltransferase involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:182,386,197...182,411,695
Ensembl chr 1:182,388,060...182,411,090
JBrowse link
G Setd1b SET domain containing 1B, histone lysine methyltransferase involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr12:33,395,963...33,421,671
Ensembl chr12:33,396,120...33,426,934
JBrowse link
G Setmar SET domain and mariner transposase fusion gene involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:141,046,058...141,058,183
Ensembl chr 4:141,046,069...141,058,197
JBrowse link
G Sfmbt1 Scm-like with four mbt domains 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr16:5,889,046...6,009,860
Ensembl chr16:5,890,782...6,006,605
JBrowse link
G Sgf29 SAGA complex associated factor 29 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:181,238,449...181,271,931
Ensembl chr 1:181,238,468...181,274,781
JBrowse link
G Sirt1 sirtuin 1 involved_in ISO (PMID:22956909) RGD PMID:22956909 NCBI chr20:25,307,143...25,329,260
Ensembl chr20:25,306,917...25,329,260
JBrowse link
G Sirt7 sirtuin 7 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:105,896,476...105,903,301
Ensembl chr10:105,896,476...105,903,172
JBrowse link
G Smarca5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 acts_upstream_of_or_within ISO (MGI:2179578|PMID:11980720) RGD PMID:11980720 MGI:2179578 NCBI chr19:27,271,918...27,304,594
Ensembl chr19:27,271,148...27,304,594
JBrowse link
G Smyd2 SET and MYND domain containing 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr13:101,425,270...101,466,576
Ensembl chr13:101,425,273...101,466,576
JBrowse link
G Spin1 spindlin 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr17:14,055,685...14,105,366
Ensembl chr17:14,055,689...14,105,411
JBrowse link
G Ss18l1 SS18L1 subunit of BAF chromatin remodeling complex involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:167,143,730...167,165,253
Ensembl chr 3:167,143,994...167,165,253
JBrowse link
G Supt4h1 SPT4 homolog, DSIF elongation factor subunit involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:72,539,323...72,545,582
Ensembl chr10:72,539,382...72,545,831
JBrowse link
G Suv39h2 SUV39H2 histone lysine methyltransferase involved_in ISO (PMID:10949293) RGD PMID:10949293 NCBI chr17:74,756,290...74,775,332
Ensembl chr17:74,756,306...74,775,332
JBrowse link
G Tdrd3 tudor domain containing 3 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr15:63,340,531...63,497,208
Ensembl chr15:63,341,235...63,476,110
JBrowse link
G Trim28 tripartite motif-containing 28 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:73,652,441...73,659,388
Ensembl chr 1:73,652,709...73,659,380
JBrowse link
G Uhrf1 ubiquitin-like with PHD and ring finger domains 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 9:1,133,117...1,154,639
Ensembl chr 9:1,134,909...1,154,631
JBrowse link
G Uimc1 ubiquitin interaction motif containing 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr17:9,523,793...9,592,810
Ensembl chr17:9,527,794...9,592,799
JBrowse link
G Usp16 ubiquitin specific peptidase 16 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr11:26,681,359...26,711,313
Ensembl chr11:26,681,414...26,710,539
JBrowse link
G Usp21 ubiquitin specific peptidase 21 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr13:83,702,582...83,709,215
Ensembl chr13:83,702,631...83,708,717
JBrowse link
G Utp3 UTP3, small subunit processome component involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr14:19,515,716...19,517,370
Ensembl chr14:19,515,669...19,517,396
JBrowse link
G Wac WW domain containing adaptor with coiled-coil involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr17:55,922,686...55,984,286
Ensembl chr17:55,923,123...55,982,301
JBrowse link
G Wdr5 WD repeat domain 5 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:10,836,964...10,856,682
Ensembl chr 3:10,837,025...10,856,671
JBrowse link
G Zbtb7a zinc finger and BTB domain containing 7a involved_in ISO (MGI:6161518|PMID:29813070) RGD PMID:29813070 MGI:6161518 NCBI chr 7:8,561,015...8,578,243
Ensembl chr 7:8,563,779...8,576,539
JBrowse link
G Zfp462 zinc finger protein 462 acts_upstream_of_or_within ISO (MGI:4440672|PMID:20219459) RGD PMID:20219459 MGI:4440672 NCBI chr 5:69,670,085...69,810,729
Ensembl chr 5:69,670,328...69,810,327
JBrowse link
G Zfp518a zinc finger protein 518A involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:239,719,305...239,744,978
Ensembl chr 1:239,719,505...239,744,979
JBrowse link
G Zmpste24 zinc metallopeptidase STE24 acts_upstream_of_or_within ISO MGI:2180033 (MGI:3789238|PMID:16079796) RGD PMID:16079796 MGI:3789238 NCBI chr 5:134,627,218...134,660,360
Ensembl chr 5:134,627,229...134,660,110
JBrowse link
chromatin remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07007744.2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 2:27,601,232...27,601,825 JBrowse link
G AABR07025089.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr16:26,091,905...26,186,434 JBrowse link
G AABR07028349.1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr17:58,274,519...58,277,290 JBrowse link
G AABR07041089.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr  X:111,554,752...111,557,411 JBrowse link
G AABR07055527.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 7:4,352,572...4,353,409 JBrowse link
G Actl6a actin-like 6A acts_upstream_of_or_within
involved_in
ISO (MGI:1314932|PMID:9845365)
(PMID:11726552), (PMID:21303910)
RGD PMID:9845365 PMID:11726552 PMID:21303910 MGI:1314932 NCBI chr 2:115,492,374...115,508,401
Ensembl chr 2:115,492,285...115,508,401
JBrowse link
G Actl6b actin-like 6B involved_in ISO (PMID:11726552) RGD PMID:11726552 NCBI chr12:19,124,887...19,141,419
Ensembl chr12:19,124,916...19,141,376
JBrowse link
G Actr5 actin related protein 5 involved_in ISO (PMID:21303910) RGD PMID:21303910 NCBI chr 3:147,282,461...147,296,110
Ensembl chr 3:147,282,624...147,296,110
JBrowse link
G Actr8 actin related protein 8 involved_in ISO (PMID:21303910) RGD PMID:21303910 NCBI chr16:5,164,131...5,186,353
Ensembl chr16:5,164,129...5,178,577
JBrowse link
G Arid1a AT-rich interaction domain 1A involved_in
acts_upstream_of_or_within
ISO (PMID:11726552)
MGI:3796520 (MGI:3789431|PMID:18448678)
RGD PMID:11726552 PMID:18448678 MGI:3789431 NCBI chr 5:145,908,181...145,981,609
Ensembl chr 5:145,908,181...145,985,564
JBrowse link
G Arid1b AT-rich interaction domain 1B involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:45,567,991...45,923,644
Ensembl chr 1:45,563,623...45,923,493
JBrowse link
G Atrx ATRX, chromatin remodeler involved_in ISS
IBA
IEA
ISO
GO_REF:0000024
PMID:21873635
GO_REF:0000108
(PMID:20651253)
UniProt
GOC
RGD
PMID:20651253 PMID:21873635 GO_REF:0000024 GO_REF:0000108, RGD:13792537 NCBI chr  X:70,850,981...70,997,330
Ensembl chr  X:70,850,981...70,997,330
JBrowse link
G Bahd1 bromo adjacent homology domain containing 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:105,891,207...105,914,414
Ensembl chr 3:105,892,478...105,914,410
JBrowse link
G Baz1a bromodomain adjacent to zinc finger domain, 1A involved_in ISO (PMID:10880450) RGD PMID:10880450 NCBI chr 6:72,389,701...72,512,516
Ensembl chr 6:72,389,703...72,512,459
JBrowse link
G Baz1b bromodomain adjacent to zinc finger domain, 1B acts_upstream_of_or_within
involved_in
ISO
IBA
(MGI:2179578|PMID:11980720)
PMID:21873635
(PMID:15543136)
RGD PMID:11980720 PMID:15543136 PMID:21873635 MGI:2179578, RGD:13792537 NCBI chr12:21,431,985...21,489,956
Ensembl chr12:21,431,985...21,490,426
JBrowse link
G Baz2a bromodomain adjacent to zinc finger domain, 2A acts_upstream_of_or_within ISO MGI:1935129 (MGI:2149896|PMID:11532953) RGD PMID:11532953 MGI:2149896 NCBI chr 7:523,204...560,911
Ensembl chr 7:523,265...560,659
JBrowse link
G Bptf bromodomain PHD finger transcription factor involved_in ISO (PMID:14609955) RGD PMID:14609955 NCBI chr10:91,980,279...92,082,731
Ensembl chr10:91,982,758...92,082,769
JBrowse link
G Brd2 bromodomain containing 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:4,727,078...4,735,389
Ensembl chr20:4,728,151...4,735,388
JBrowse link
G Brd3 bromodomain containing 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:10,773,163...10,829,675
Ensembl chr 3:10,775,272...10,829,577
JBrowse link
G Brd4 bromodomain containing 4 involved_in ISO
IBA
(PMID:23728299)
PMID:21873635
RGD PMID:23728299 PMID:21873635 RGD:13792537 NCBI chr 7:11,216,446...11,296,029
Ensembl chr 7:11,216,446...11,295,539
JBrowse link
G Brdt bromodomain testis associated involved_in
acts_upstream_of_or_within
IDA
IBA
ISO
PMID:21873635
(MGI:5430881|PMID:19794495)
(MGI:2668282|PMID:12861021)
RGD PMID:12861021 PMID:19794495 PMID:22215678 PMID:21873635 MGI:2668282 MGI:5430881, RGD:9586361, RGD:13792537 NCBI chr14:2,421,094...2,445,842
Ensembl chr14:2,387,796...2,445,842
JBrowse link
G Btaf1 B-TFIID TATA-box binding protein associated factor 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:234,653,219...234,743,903
Ensembl chr 1:234,653,156...234,743,903
JBrowse link
G Cecr2 CECR2, histone acetyl-lysine reader involved_in ISO (PMID:15640247) RGD PMID:15640247 NCBI chr 4:153,890,310...153,998,078
Ensembl chr 4:153,890,206...153,993,451
JBrowse link
G Cfdp1 craniofacial development protein 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:39,718,313...39,823,819
Ensembl chr19:39,718,347...39,823,824
JBrowse link
G Chd1 chromodomain helicase DNA binding protein 1 acts_upstream_of_or_within
involved_in
ISO
IBA
MGI:1316736 (MGI:3616364|PMID:16415155)
PMID:21873635
(PMID:28866611)
RGD PMID:16415155 PMID:28866611 PMID:21873635 MGI:3616364, RGD:13792537 NCBI chr 1:56,661,743...56,729,119
Ensembl chr 1:56,664,054...56,728,125
JBrowse link
G Chd1l chromodomain helicase DNA binding protein 1-like involved_in ISO
IBA
(PMID:19661379)
PMID:21873635
RGD PMID:19661379 PMID:21873635 RGD:13792537 NCBI chr 2:185,138,526...185,217,498
Ensembl chr 2:185,139,308...185,217,595
JBrowse link
G Chd2 chromodomain helicase DNA binding protein 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:127,188,146...127,317,041
Ensembl chr 1:127,190,059...127,300,502
JBrowse link
G Chd3 chromodomain helicase DNA binding protein 3 involved_in ISO
IBA
(PMID:30397230), (PMID:9790534)
PMID:21873635
RGD PMID:9790534 PMID:30397230 PMID:21873635 RGD:13792537 NCBI chr10:54,063,629...54,090,030
Ensembl chr10:54,063,629...54,090,047
JBrowse link
G Chd4 chromodomain helicase DNA binding protein 4 involved_in ISO
IBA
(PMID:9790534)
PMID:21873635
RGD PMID:9790534 PMID:21873635 RGD:13792537 NCBI chr 4:157,898,503...157,931,632
Ensembl chr 4:157,899,391...157,931,541
JBrowse link
G Chd5 chromodomain helicase DNA binding protein 5 involved_in IEA
IBA
GO_REF:0000002
PMID:21873635
InterPro PMID:21873635 GO_REF:0000002, RGD:13792537 NCBI chr 5:162,848,273...162,898,997
Ensembl chr 5:162,848,394...162,896,291
JBrowse link
G Chd6 chromodomain helicase DNA binding protein 6 involved_in IEA
IBA
GO_REF:0000108
PMID:21873635
GOC PMID:21873635 GO_REF:0000108, RGD:13792537 NCBI chr 3:149,596,509...149,757,765
Ensembl chr 3:149,596,509...149,757,755
JBrowse link
G Chd7 chromodomain helicase DNA binding protein 7 acts_upstream_of_or_within
involved_in
ISO
IBA
MGI:2176467|MGI:4433295 (MGI:5694290|PMID:26102480)
PMID:21873635
RGD PMID:26102480 PMID:21873635 MGI:5694290, RGD:13792537 NCBI chr 5:21,812,007...21,995,358
Ensembl chr 5:21,812,070...21,995,358
JBrowse link
G Chd8 chromodomain helicase DNA binding protein 8 involved_in ISO
IBA
ISS
(PMID:18378692)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:18378692 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr15:24,905,789...24,965,461
Ensembl chr15:24,905,789...24,951,285
JBrowse link
G Chd9 chromodomain helicase DNA binding protein 9 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr19:15,941,535...16,146,220
Ensembl chr19:15,942,687...16,164,556
JBrowse link
G Chrac1 chromatin accessibility complex subunit 1 involved_in ISO (PMID:10880450) RGD PMID:10880450 NCBI chr 7:105,013,047...105,016,435
Ensembl chr 7:105,013,015...105,017,136
JBrowse link
G Daxx death-domain associated protein involved_in ISO (PMID:20651253) RGD PMID:20651253 NCBI chr20:4,970,090...4,976,145
Ensembl chr20:4,970,092...4,975,843
JBrowse link
G Dr1 down-regulator of transcription 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:1,458,223...1,469,578
Ensembl chr14:1,458,223...1,469,638
JBrowse link
G Eomes eomesodermin involved_in ISO (MGI:6220563|PMID:30186101) RGD PMID:30186101 MGI:6220563 NCBI chr 8:118,181,340...118,189,186
Ensembl chr 8:118,181,777...118,188,316
JBrowse link
G Ep400 E1A binding protein p400 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr12:45,891,886...46,002,523
Ensembl chr12:45,891,916...45,998,861
JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr16:7,764,983...7,835,587
Ensembl chr16:7,765,013...7,835,587
JBrowse link
G Ercc6l ERCC excision repair 6 like, spindle assembly checkpoint helicase involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr  X:67,245,414...67,261,222
Ensembl chr  X:67,245,414...67,280,756
JBrowse link
G Ercc6l2 ERCC excision repair 6 like 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr17:1,076,486...1,311,281
Ensembl chr17:1,216,428...1,310,275
JBrowse link
G Ezh1 enhancer of zeste 1 polycomb repressive complex 2 subunit involved_in ISO (MGI:3820717|PMID:19026781) RGD PMID:19026781 MGI:3820717 NCBI chr10:86,126,023...86,162,001
Ensembl chr10:86,126,015...86,161,921
JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 4:76,624,399...76,687,362
Ensembl chr 4:76,624,399...76,687,362
JBrowse link
G Foxa1 forkhead box A1 involved_in IEA
ISO
GO_REF:0000107
(MGI:4456944|PMID:15748903)
Ensembl
RGD
PMID:15748903 GO_REF:0000107 MGI:4456944 NCBI chr 6:75,099,907...75,136,534
Ensembl chr 6:75,103,503...75,136,188
JBrowse link
G Gata3 GATA binding protein 3 acts_upstream_of_or_within ISO (MGI:3046385|PMID:15087456) RGD PMID:15087456 MGI:3046385 NCBI chr17:68,643,760...68,666,000
Ensembl chr17:68,643,873...68,665,391
JBrowse link
G Gatad1 GATA zinc finger domain containing 1 involved_in ISO (PMID:20850016) RGD PMID:20850016 NCBI chr 4:30,507,530...30,519,109
Ensembl chr 4:30,507,538...30,519,107
JBrowse link
G Gatad2a GATA zinc finger domain containing 2A involved_in ISO (PMID:9790534) RGD PMID:9790534 NCBI chr16:19,429,578...19,520,320
Ensembl chr16:19,429,578...19,519,587
JBrowse link
G Gatad2b GATA zinc finger domain containing 2B involved_in ISO (PMID:9790534) RGD PMID:9790534 NCBI chr 2:175,748,594...175,829,837
Ensembl chr 2:175,749,433...175,825,542
JBrowse link
G Hcfc1 host cell factor C1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:151,687,779...151,712,688
Ensembl chr  X:151,687,779...151,712,638
JBrowse link
G Hcfc2 host cell factor C2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:20,983,986...21,019,826
Ensembl chr 7:20,991,017...21,019,801
JBrowse link
G Hdac1 histone deacetylase 1 involved_in ISO (PMID:9790534) RGD PMID:9790534 NCBI chr 5:141,853,992...141,881,057
Ensembl chr 5:141,853,989...141,881,111
JBrowse link
G Hdac2 histone deacetylase 2 involved_in ISO (PMID:9790534) RGD PMID:9790534 NCBI chr20:40,548,250...40,571,609
Ensembl chr20:40,548,250...40,571,609
JBrowse link
G Hdac4 histone deacetylase 4 involved_in ISO (PMID:18850004) RGD PMID:18850004 NCBI chr 9:92,503,467...92,750,164
Ensembl chr 9:92,507,611...92,750,164
JBrowse link
G Hltf helicase-like transcription factor involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 2:102,549,724...102,609,492
Ensembl chr 2:102,549,724...102,609,327
JBrowse link
G Hnf1a HNF1 homeobox A acts_upstream_of_or_within
involved_in
ISO MGI:2154359 (MGI:3699537|PMID:11733582)
(MGI:2388420|PMID:12367519)
RGD PMID:11733582 PMID:12367519 MGI:2388420 MGI:3699537 NCBI chr12:41,638,536...41,672,806
Ensembl chr12:41,645,587...41,672,104
JBrowse link
G Ino80 INO80 complex ATPase subunit involved_in ISO (PMID:21303910) RGD PMID:21303910 NCBI chr 3:106,368,455...106,465,716
Ensembl chr 3:106,368,455...106,467,911
JBrowse link
G Ino80b INO80 complex subunit B involved_in ISO (PMID:21303910) RGD PMID:21303910 NCBI chr 4:115,627,907...115,631,069
Ensembl chr 4:115,627,908...115,631,456
JBrowse link
G Ino80c INO80 complex subunit C involved_in ISO
IBA
(PMID:21303910)
PMID:21873635
RGD PMID:21303910 PMID:21873635 RGD:13792537 NCBI chr18:15,378,764...15,398,574
Ensembl chr18:15,378,770...15,393,403
JBrowse link
G Ino80d INO80 complex subunit D involved_in ISO (PMID:21303910) RGD PMID:21303910 NCBI chr 9:64,447,075...64,514,013
Ensembl chr 9:64,457,165...64,515,242
JBrowse link
G Ino80e INO80 complex subunit E involved_in ISO (PMID:21303910) RGD PMID:21303910 NCBI chr 1:181,461,406...181,472,059
Ensembl chr 1:181,461,408...181,472,469
JBrowse link
G Jarid2 jumonji and AT-rich interaction domain containing 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:19,777,487...19,957,696
Ensembl chr17:19,777,266...19,955,690
JBrowse link
G Kat2a lysine acetyltransferase 2A involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:85,632,216...85,640,561
Ensembl chr10:85,632,216...85,640,166
JBrowse link
G Kat2b lysine acetyltransferase 2B involved_in ISO (PMID:17707232) RGD PMID:17707232 NCBI chr 9:6,562,525...6,667,064
Ensembl chr 9:6,562,288...6,667,064
JBrowse link
G Kdm4a lysine demethylase 4A involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:131,672,754...131,719,534
Ensembl chr 5:131,672,754...131,719,501
JBrowse link
G Kdm4b lysine demethylase 4B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:1,158,737...1,237,228
Ensembl chr 9:1,158,752...1,236,543
JBrowse link
G Kdm4c lysine demethylase 4C involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:88,100,710...88,306,821
Ensembl chr 5:88,100,733...88,306,818
JBrowse link
G Kdm4d lysine demethylase 4D involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:11,279,756...11,304,920
Ensembl chr 8:11,268,859...11,305,290
JBrowse link
G Kdm5a lysine demethylase 5A involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:153,565,909...153,643,912
Ensembl chr 4:153,565,846...153,642,422
JBrowse link
G Kdm5b lysine demethylase 5B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:46,001,589...46,073,868
Ensembl chr13:46,002,542...46,073,872
JBrowse link
G Kdm5c lysine demethylase 5C involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:21,345,459...21,387,045
Ensembl chr  X:21,345,481...21,381,870
JBrowse link
G Kdm6a lysine demethylase 6A involved_in ISO (MGI:4866963|PMID:21095589) RGD PMID:21095589 MGI:4866963 NCBI chr  X:4,337,466...4,477,100
Ensembl chr  X:4,337,750...4,477,062
JBrowse link
G Kdm6b lysine demethylase 6B involved_in ISO (MGI:4866963|PMID:21095589) RGD PMID:21095589 MGI:4866963 NCBI chr10:54,120,716...54,142,212
Ensembl chr10:54,121,848...54,130,794
JBrowse link
G Klf1 Kruppel like factor 1 acts_upstream_of_or_within ISO (MGI:3056025|PMID:15489291) RGD PMID:15489291 MGI:3056025 NCBI chr19:23,250,627...23,253,802
Ensembl chr19:23,250,631...23,253,758
JBrowse link
G Mbd2 methyl-CpG binding domain protein 2 involved_in ISO (PMID:9790534) RGD PMID:9790534 NCBI chr18:64,174,002...64,240,795
Ensembl chr18:64,174,002...64,240,794
JBrowse link
G Mbd3 methyl-CpG binding domain protein 3 involved_in ISO (PMID:9790534) RGD PMID:9790534 NCBI chr 7:9,312,961...9,320,166
Ensembl chr 7:9,313,098...9,320,165
JBrowse link
G Mcrs1 microspherule protein 1 involved_in ISO (PMID:21303910) RGD PMID:21303910 NCBI chr 7:130,383,853...130,392,667
Ensembl chr 7:130,383,853...130,392,685
JBrowse link
G Men1 menin 1 acts_upstream_of_or_within ISO MGI:2158698|MGI:88393 (MGI:3616131|PMID:15044367), (MGI:3616364|PMID:16415155) RGD PMID:15044367 PMID:16415155 MGI:3616131 MGI:3616364 NCBI chr 1:203,638,905...203,644,871
Ensembl chr 1:203,639,000...203,644,871
JBrowse link
G Mier1 MIER1 transcriptional regulator involved_in ISO (PMID:12482978) RGD PMID:12482978 NCBI chr 5:117,876,012...117,927,592
Ensembl chr 5:117,870,382...117,927,589
JBrowse link
G Mllt1 MLLT1, super elongation complex subunit involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:1,731,077...1,775,985
Ensembl chr 9:1,731,080...1,775,970
JBrowse link
G Mllt3 MLLT3, super elongation complex subunit involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:102,259,075...102,515,447
Ensembl chr 5:102,260,011...102,515,361
JBrowse link
G Morc2 MORC family CW-type zinc finger 2 involved_in ISO (PMID:23260667) RGD PMID:23260667 NCBI chr14:78,529,603...78,571,375
Ensembl chr14:78,527,009...78,571,343
JBrowse link
G Mta1 metastasis associated 1 involved_in ISO (PMID:9790534) RGD PMID:9790534 NCBI chr 6:132,178,608...132,217,641
Ensembl chr 6:132,178,853...132,217,641
JBrowse link
G Mta2 metastasis associated 1 family, member 2 involved_in ISO (PMID:9790534) RGD PMID:9790534 NCBI chr 1:205,838,181...205,846,903
Ensembl chr 1:205,837,964...205,846,946
JBrowse link
G Mta3 metastasis associated 1 family, member 3 involved_in ISO (PMID:9790534) RGD PMID:9790534 NCBI chr 6:10,867,028...10,987,221
Ensembl chr 6:10,867,011...10,986,883
JBrowse link
G Myb MYB proto-oncogene, transcription factor involved_in ISO (PMID:20484083) RGD PMID:20484083 NCBI chr 1:15,939,771...15,973,367
Ensembl chr 1:15,939,761...15,973,057
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor involved_in ISO
ISS
(PMID:21533051)
GO_REF:0000024
RGD
UniProt
PMID:21533051 GO_REF:0000024 NCBI chr 7:93,593,705...93,598,633
Ensembl chr 7:93,593,705...93,598,630
JBrowse link
G Mysm1 myb-like, SWIRM and MPN domains 1 involved_in ISO
IBA
(PMID:17707232)
PMID:21873635
RGD PMID:17707232 PMID:21873635 RGD:13792537 NCBI chr 5:109,761,345...109,826,652
Ensembl chr 5:109,776,286...109,819,967
JBrowse link
G Nfrkb nuclear factor related to kappa B binding protein involved_in ISO (PMID:21303910) RGD PMID:21303910 NCBI chr 8:29,831,802...29,863,360
Ensembl chr 8:29,831,812...29,863,359
JBrowse link
G Npm1 nucleophosmin 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:17,741,512...17,751,626
Ensembl chr10:17,739,941...17,751,645
JBrowse link
G Npm2 nucleophosmin/nucleoplasmin 2 involved_in
acts_upstream_of_or_within
ISO
IBA
(PMID:12714744)
PMID:21873635
MGI:2182141 (MGI:2662932|PMID:12714744)
RGD PMID:12714744 PMID:21873635 MGI:2662932, RGD:13792537 NCBI chr15:45,722,494...45,729,246
Ensembl chr15:45,722,400...45,729,726
JBrowse link
G Npm3 nucleophosmin/nucleoplasmin, 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:244,595,638...244,597,623
Ensembl chr 1:244,595,644...244,597,591
JBrowse link
G Nr3c1 nuclear receptor subfamily 3, group C, member 1 involved_in IMP PMID:12917342 UniProt PMID:12917342 RGD:8553888 NCBI chr18:31,271,681...31,393,320
Ensembl chr18:31,271,681...31,393,375
JBrowse link
G Nudt5 nudix hydrolase 5 involved_in ISO
ISS
(PMID:27257257)
GO_REF:0000024
RGD
UniProt
PMID:27257257 GO_REF:0000024 NCBI chr17:72,435,690...72,459,008
Ensembl chr17:72,435,697...72,459,001
JBrowse link
G Pabpc1l poly(A) binding protein, cytoplasmic 1-like acts_upstream_of_or_within ISO MGI:5437740 (MGI:5688228|PMID:26134869) RGD PMID:26134869 MGI:5688228 NCBI chr 3:152,692,825...152,725,997
Ensembl chr 3:152,693,700...152,725,997
JBrowse link
G Padi4 peptidyl arginine deiminase 4 involved_in ISS
ISO
GO_REF:0000024
(MGI:5545819|PMID:24463520)
UniProt
RGD
PMID:24463520 GO_REF:0000024 MGI:5545819 NCBI chr 5:153,041,351...153,074,412
Ensembl chr 5:153,041,352...153,074,362
JBrowse link
G Pak1 p21 (RAC1) activated kinase 1 involved_in ISO
ISS
(PMID:23260667)
GO_REF:0000024
RGD
UniProt
PMID:23260667 GO_REF:0000024 NCBI chr 1:152,111,172...152,226,390
Ensembl chr 1:152,111,188...152,226,383
JBrowse link
G Pax6 paired box 6 involved_in ISO
IEA
(MGI:6220563|PMID:30186101)
GO_REF:0000107
RGD
Ensembl
PMID:30186101 GO_REF:0000107 MGI:6220563 NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
JBrowse link
G Pax7 paired box 7 acts_upstream_of_or_within ISO MGI:1857831|MGI:3047633 (MGI:5440096|PMID:23070814) RGD PMID:23070814 MGI:5440096 NCBI chr 5:151,996,368...152,098,023
Ensembl chr 5:151,999,092...152,097,979
JBrowse link
G Pbrm1 polybromo 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr16:6,213,507...6,312,895
Ensembl chr16:6,213,300...6,311,780
JBrowse link
G Pih1d1 PIH1 domain containing 1 involved_in ISO (PMID:22368283) RGD PMID:22368283 NCBI chr 1:95,639,597...95,645,295
Ensembl chr 1:95,639,592...95,645,290
JBrowse link
G Pole3 DNA polymerase epsilon 3, accessory subunit involved_in ISO (PMID:10880450) RGD PMID:10880450 NCBI chr 5:75,973,941...75,977,175
Ensembl chr 5:75,974,717...75,977,231
JBrowse link
G Rad54b RAD54 homolog B involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 5:25,030,885...25,104,616
Ensembl chr 5:25,032,066...25,104,616
JBrowse link
G Rad54l2 RAD54 like 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 8:107,324,945...107,427,033
Ensembl chr 8:107,327,420...107,427,106
JBrowse link
G Rbbp4 RB binding protein 4, chromatin remodeling factor involved_in ISO
IBA
(PMID:14609955), (PMID:9790534)
PMID:21873635
RGD PMID:9790534 PMID:14609955 PMID:21873635 RGD:13792537 NCBI chr 5:141,655,863...141,675,157
Ensembl chr 5:141,638,421...141,675,284
JBrowse link
G Rbbp7 RB binding protein 7, chromatin remodeling factor involved_in ISO
IBA
(PMID:14609955), (PMID:9790534)
PMID:21873635
RGD PMID:9790534 PMID:14609955 PMID:21873635 RGD:13792537 NCBI chr  X:31,913,080...31,931,245
Ensembl chr  X:31,913,081...31,931,226
JBrowse link
G Rere arginine-glutamic acid dipeptide repeats acts_upstream_of_or_within ISO PR:O09106 (MGI:2683041|PMID:14645126) RGD PMID:14645126 MGI:2683041 NCBI chr 5:160,765,855...161,097,678
Ensembl chr 5:160,765,934...161,097,677
JBrowse link
G RGD1563620 similar to retinoblastoma binding protein 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:153,958,955...153,961,336
Ensembl chr 2:153,958,955...153,960,757
JBrowse link
G RGD1564855 similar to RuvB-like protein 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:1,640,138...1,641,886
Ensembl chr  X:1,640,300...1,641,811
JBrowse link
G Rsf1 remodeling and spacing factor 1 involved_in ISO (PMID:9836642) RGD PMID:9836642 NCBI chr 1:151,892,055...152,015,089
Ensembl chr 1:151,892,434...152,009,051
JBrowse link
G Ruvbl1 RuvB-like AAA ATPase 1 involved_in ISO
IBA
(PMID:21303910)
PMID:21873635
RGD PMID:21303910 PMID:21873635 RGD:13792537 NCBI chr 4:120,932,486...120,967,400
Ensembl chr 4:120,932,417...121,029,384
JBrowse link
G Ruvbl2 RuvB-like AAA ATPase 2 involved_in ISO
IBA
(PMID:21303910), (PMID:23637611)
PMID:21873635
RGD PMID:21303910 PMID:23637611 PMID:21873635 RGD:13792537 NCBI chr 1:95,902,014...95,915,364
Ensembl chr 1:95,901,701...95,915,342
JBrowse link
G Satb1 SATB homeobox 1 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:2386676 (MGI:5295905|PMID:21930775)
RGD PMID:21930775 PMID:21873635 MGI:5295905, RGD:13792537 NCBI chr 9:4,677,817...4,773,061
Ensembl chr 9:4,680,920...4,753,251
JBrowse link
G Satb2 SATB homeobox 2 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:3793380|PMID:18255031)
RGD PMID:18255031 PMID:21873635 MGI:3793380, RGD:13792537 NCBI chr 9:58,348,027...58,534,256
Ensembl chr 9:58,350,246...58,530,707
JBrowse link
G Scmh1 Scm polycomb group protein homolog 1 acts_upstream_of_or_within ISO MGI:3706668 (MGI:3703453|PMID:17215307) RGD PMID:17215307 MGI:3703453 NCBI chr 5:133,991,167...134,115,893
Ensembl chr 5:133,990,520...134,122,105
JBrowse link
G Smarca1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 involved_in ISO (PMID:14609955), (PMID:15640247) RGD PMID:14609955 PMID:15640247 NCBI chr  X:126,980,201...127,066,385
Ensembl chr  X:126,994,947...127,066,347
JBrowse link
G Smarca2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 NOT|involved_in ISO (PMID:22368283) RGD PMID:22368283 NCBI chr 1:224,191,125...224,358,640
Ensembl chr 1:224,191,125...224,358,684
JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 acts_upstream_of_or_within
involved_in
IDA
ISO
MGI:3611933 (MGI:3610843|PMID:16287714)
(PMID:10943845), (PMID:11726552), (PMID:22368283)
RGD PMID:10943845 PMID:11726552 PMID:16287714 PMID:22368283 PMID:9001244 MGI:3610843, RGD:634124 NCBI chr 8:20,167,717...20,258,975
Ensembl chr 8:20,167,717...20,258,975
JBrowse link
G Smarca5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 acts_upstream_of_or_within
involved_in
ISO MGI:2151152 (MGI:2149896|PMID:11532953), (MGI:2179578|PMID:11980720)
(PMID:10880450), (PMID:15543136), (PMID:9836642)
RGD PMID:9836642 PMID:10880450 PMID:11532953 PMID:11980720 PMID:15543136 MGI:2149896 MGI:2179578 NCBI chr19:27,271,918...27,304,594
Ensembl chr19:27,271,148...27,304,594
JBrowse link
G Smarcad1 SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1` involved_in ISO (PMID:22960744) RGD PMID:22960744 NCBI chr 4:94,311,441...94,379,184
Ensembl chr 4:94,311,489...94,372,563
JBrowse link
G Smarcal1 Swi/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 9:74,239,718...74,286,156
Ensembl chr 9:74,240,241...74,286,146
JBrowse link
G Smarcb1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 involved_in ISO (PMID:11726552), (PMID:22368283) RGD PMID:11726552 PMID:22368283 NCBI chr20:12,741,164...12,763,616
Ensembl chr20:12,741,477...12,763,620
JBrowse link
G Smarcc1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 involved_in ISO (PMID:10078207), (PMID:11018012), (PMID:11726552) RGD PMID:10078207 PMID:11018012 PMID:11726552 NCBI chr 8:110,111,097...110,214,727
Ensembl chr 8:110,111,122...110,214,720
JBrowse link
G Smarcc2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 involved_in ISO (PMID:10078207), (PMID:11018012), (PMID:11726552) RGD PMID:10078207 PMID:11018012 PMID:11726552 NCBI chr 7:881,844...910,090
Ensembl chr 7:881,421...909,978
JBrowse link
G Smarcd1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 involved_in ISO (PMID:11726552), (PMID:12917342) RGD PMID:11726552 PMID:12917342 NCBI chr 7:130,829,783...130,840,323
Ensembl chr 7:130,829,768...130,840,323
JBrowse link
G Smarcd2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 involved_in ISO (PMID:11726552) RGD PMID:11726552 NCBI chr10:91,193,752...91,202,817
Ensembl chr10:91,193,752...91,204,341
JBrowse link
G Smarcd3 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 involved_in ISO (PMID:11726552) RGD PMID:11726552 NCBI chr 4:10,548,693...10,580,334
Ensembl chr 4:10,548,751...10,580,326
JBrowse link
G Smarce1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 involved_in ISO
IEA
(PMID:11726552)
GO_REF:0000002
RGD
InterPro
PMID:11726552 GO_REF:0000002 NCBI chr10:84,159,270...84,180,547
Ensembl chr10:84,159,275...84,179,989
JBrowse link
G Smyd1 SET and MYND domain containing 1 acts_upstream_of_or_within ISO PR:O09106 (MGI:2178868|PMID:11923873) RGD PMID:11923873 MGI:2178868 NCBI chr 4:103,195,330...103,252,989
Ensembl chr 4:103,200,322...103,311,766
JBrowse link
G Sox9 SRY-box transcription factor 9 involved_in ISO
ISS
(PMID:20484372)
GO_REF:0000024
RGD
UniProt
PMID:20484372 GO_REF:0000024 NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994
JBrowse link
G Suv39h2 SUV39H2 histone lysine methyltransferase involved_in ISO (PMID:10949293) RGD PMID:10949293 NCBI chr17:74,756,290...74,775,332
Ensembl chr17:74,756,306...74,775,332
JBrowse link
G Tada2a transcriptional adaptor 2A involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:68,966,502...69,014,149
Ensembl chr10:68,966,502...69,014,105
JBrowse link
G Tbr1 T-box brain transcription factor 1 involved_in ISO (MGI:6220563|PMID:30186101) RGD PMID:30186101 MGI:6220563 NCBI chr 3:46,350,237...46,368,397
Ensembl chr 3:46,351,213...46,361,041
JBrowse link
G Tfpt TCF3 fusion partner involved_in ISO
IEA
(PMID:21303910)
GO_REF:0000107
RGD
Ensembl
PMID:21303910 GO_REF:0000107 NCBI chr 1:65,587,855...65,597,407
Ensembl chr 1:65,582,359...65,611,689
JBrowse link
G Tnp1 transition protein 1 involved_in IBA
ISO
ISS
PMID:21873635
(PMID:12743712)
GO_REF:0000024
RGD
UniProt
PMID:12743712 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 9:74,594,463...74,595,072
Ensembl chr 9:74,594,466...74,595,274
JBrowse link
G Top1 DNA topoisomerase I involved_in ISS
ISO
GO_REF:0000024
(PMID:22904072)
UniProt
RGD
PMID:22904072 GO_REF:0000024 NCBI chr 3:149,293,658...149,375,405
Ensembl chr 3:149,293,403...149,376,623
JBrowse link
G Tp63 tumor protein p63 acts_upstream_of_or_within ISO MGI:1934580 (MGI:5295905|PMID:21930775) RGD PMID:21930775 MGI:5295905 NCBI chr11:74,838,858...75,049,764
Ensembl chr11:74,838,859...75,049,398
JBrowse link
G Ttf1 transcription termination factor 1 acts_upstream_of_or_within ISO (MGI:85982|PMID:9049305) RGD PMID:9049305 MGI:85982 NCBI chr 3:12,384,626...12,409,257
Ensembl chr 3:12,384,655...12,409,257
JBrowse link
G Ttf2 transcription termination factor 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 2:188,366,321...188,397,750
Ensembl chr 2:188,366,331...188,397,689
JBrowse link
G Tti1 TELO2 interacting protein 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:146,639,048...146,682,945
Ensembl chr 3:146,639,054...146,682,847
JBrowse link
G Uchl5 ubiquitin C-terminal hydrolase L5 involved_in ISO (PMID:21303910) RGD PMID:21303910 NCBI chr13:55,520,722...55,556,503
Ensembl chr13:55,520,729...55,556,502
JBrowse link
G Yeats2 YEATS domain containing 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:80,743,134...80,829,253
Ensembl chr11:80,743,134...80,829,208
JBrowse link
G Yeats4 YEATS domain containing 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:52,858,313...52,865,454
Ensembl chr 7:52,858,305...52,865,635
JBrowse link
G Yy1 YY1 transcription factor involved_in ISO (PMID:21303910) RGD PMID:21303910 NCBI chr 6:127,706,739...127,731,907
Ensembl chr 6:127,707,596...127,732,747
JBrowse link
G Zbtb1 zinc finger and BTB domain containing 1 involved_in ISO (PMID:24657165) RGD PMID:24657165 NCBI chr 6:95,096,838...95,125,811
Ensembl chr 6:95,096,387...95,118,996
JBrowse link
G Zbtb7a zinc finger and BTB domain containing 7a involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:26816381)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:26816381 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:8,561,015...8,578,243
Ensembl chr 7:8,563,779...8,576,539
JBrowse link
G Zfp827 zinc finger protein 827 involved_in ISO (PMID:25150861) RGD PMID:25150861 NCBI chr19:28,720,568...28,887,381
Ensembl chr19:28,721,021...28,887,191
JBrowse link
G Zranb3 zinc finger RANBP2-type containing 3 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr13:39,440,653...39,595,782
Ensembl chr13:39,440,889...39,595,670
JBrowse link
chromosome condensation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Banf1 BAF nuclear assembly factor 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:202,672,170...202,674,215
Ensembl chr 1:202,671,305...202,674,188
JBrowse link
G Banf2 BANF family member 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:131,387,107...131,442,837
Ensembl chr 3:131,388,130...131,442,832
JBrowse link
G Cdk1 cyclin-dependent kinase 1 IMP RGD PMID:15695611 RGD:2301352 NCBI chr20:19,266,226...19,281,417
Ensembl chr20:19,266,248...19,281,408
JBrowse link
G H1f0 H1.0 linker histone involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:110,592,834...110,594,694
Ensembl chr 7:110,592,208...110,594,694
JBrowse link
G H1f1 H1.1 linker histone, cluster member involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:41,366,268...41,367,011
Ensembl chr17:41,366,268...41,367,011
JBrowse link
G H1f10 H1.10 linker histone involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:120,440,515...120,444,705
Ensembl chr 4:120,440,870...120,441,448
JBrowse link
G H1f2 H1.2 linker histone, cluster member involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:41,391,106...41,392,611
Ensembl chr17:41,388,477...41,392,635
JBrowse link
G H1f4 H1.4 linker histone, cluster member involved_in TAS
IBA
PMID:21873635 RGD
GO_Central
PMID:12211017 PMID:21873635 RGD:1300396, RGD:13792537 NCBI chr17:41,486,634...41,487,293
Ensembl chr17:41,486,560...41,487,403
JBrowse link
G H1f5 H1.5 linker histone, cluster member involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:42,726,189...42,726,857
Ensembl chr17:42,726,127...42,769,160
JBrowse link
G H1f6 H1.6 linker histone, cluster member involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:41,427,365...41,428,109
Ensembl chr17:41,427,323...41,428,119
JBrowse link
G H1f7 H1.7 linker histone involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:129,408,521...129,409,888
Ensembl chr 7:129,408,359...129,409,930
JBrowse link
G H1f8 H1.8 linker histone involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:148,993,133...148,998,254
Ensembl chr 4:148,993,133...148,998,254
JBrowse link
G H4f3 H1.3 linker histone, cluster member involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:41,528,576...41,554,586
Ensembl chr17:41,529,667...41,552,334
JBrowse link
G Hils1 histone linker H1 domain, spermatid-specific 1 involved_in IBA
ISO
PMID:21873635
(PMID:12920187)
RGD PMID:12920187 PMID:21873635 RGD:13792537 NCBI chr10:79,913,525...79,914,321
Ensembl chr10:79,913,480...79,914,321
JBrowse link
G Prm1 protamine 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:4,871,909...4,872,155 JBrowse link
G Prm2 protamine 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:4,876,398...4,876,834
Ensembl chr10:4,873,372...4,877,026
JBrowse link
G Prm3 protamine 3 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:4,877,471...4,877,985
Ensembl chr10:4,877,471...4,877,985
JBrowse link
G Rock2 Rho-associated coiled-coil containing protein kinase 2 TAS RGD PMID:12126956 RGD:633802 NCBI chr 6:39,679,116...39,774,033
Ensembl chr 6:39,679,082...39,774,031
JBrowse link
G Smc5 structural maintenance of chromosomes 5 acts_upstream_of_or_within ISO MGI:5882566 (MGI:5882483|PMID:26919979) RGD PMID:26919979 MGI:5882483 NCBI chr 1:220,769,366...220,839,138
Ensembl chr 1:220,769,366...220,839,096
JBrowse link
G Top2a DNA topoisomerase II alpha acts_upstream_of_or_within ISO (MGI:2158879|PMID:11835580) RGD PMID:11835580 MGI:2158879 NCBI chr10:83,946,186...83,975,694
Ensembl chr10:83,945,735...83,976,874
JBrowse link
chromosome organization involved in meiotic cell cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atm ATM serine/threonine kinase acts_upstream_of_or_within ISO MGI:1926343 (MGI:83357|PMID:8843194) RGD PMID:8843194 MGI:83357 NCBI chr 8:53,828,741...53,932,773
Ensembl chr 8:53,831,093...53,932,437
JBrowse link
G Atrx ATRX, chromatin remodeler acts_upstream_of_or_within ISO (MGI:3052396|PMID:15242786) RGD PMID:15242786 MGI:3052396 NCBI chr  X:70,850,981...70,997,330
Ensembl chr  X:70,850,981...70,997,330
JBrowse link
G Ccne1 cyclin E1 acts_upstream_of_or_within ISO MGI:1329034 (MGI:5698037|PMID:24586195) RGD PMID:24586195 MGI:5698037 NCBI chr 1:90,781,947...90,791,188
Ensembl chr 1:90,781,949...90,791,101
JBrowse link
G Ccne2 cyclin E2 acts_upstream_of_or_within ISO MGI:88316 (MGI:5698037|PMID:24586195) RGD PMID:24586195 MGI:5698037 NCBI chr 5:24,285,078...24,298,258
Ensembl chr 5:24,284,922...24,297,632
JBrowse link
G Dmc1 DNA meiotic recombinase 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:111,124,888...111,167,465
Ensembl chr 7:111,124,888...111,167,952
JBrowse link
G Haspin histone H3 associated protein kinase involved_in ISO (MGI:5634589|PMID:25645018) RGD PMID:25645018 MGI:5634589 NCBI chr10:57,747,731...57,750,532
Ensembl chr10:57,747,573...57,750,512
JBrowse link
G Meioc meiosis specific with coiled-coil domain involved_in ISO (MGI:5905073|PMID:28380054) RGD PMID:28380054 MGI:5905073 NCBI chr10:87,628,807...87,646,485
Ensembl chr10:87,628,875...87,646,752
JBrowse link
G Rad50 RAD50 double strand break repair protein involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:2387852 (MGI:3831647|PMID:19001091)
RGD PMID:19001091 PMID:21873635 MGI:3831647, RGD:13792537 NCBI chr10:37,809,353...37,861,309
Ensembl chr10:37,808,726...37,861,396
JBrowse link
G Rad51 RAD51 recombinase involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:5444025 (MGI:5442243|PMID:22778135)
RGD PMID:22778135 PMID:21873635 MGI:5442243, RGD:13792537 NCBI chr 3:106,099,753...106,125,038
Ensembl chr 3:106,100,381...106,125,035
JBrowse link
cohesin loading term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mau2 MAU2 sister chromatid cohesion factor involved_in ISO (PMID:22628566) RGD PMID:22628566 NCBI chr16:19,383,847...19,414,996
Ensembl chr16:19,383,492...19,408,727
JBrowse link
G Nipbl NIPBL, cohesin loading factor involved_in ISO (PMID:22628566)
(MGI:6102971|PMID:29094699)
RGD PMID:22628566 PMID:29094699 MGI:6102971 NCBI chr 2:57,399,443...57,586,770
Ensembl chr 2:57,399,445...57,565,899
JBrowse link
deactivation of mitotic spindle assembly checkpoint term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdt1 chromatin licensing and DNA replication factor 1 involved_in ISO (PMID:22581055) RGD PMID:22581055 NCBI chr19:50,620,713...50,625,659
Ensembl chr19:50,620,713...50,625,659
JBrowse link
G Mad1l1 mitotic arrest deficient 1 like 1 involved_in ISO (PMID:19010891) RGD PMID:19010891 NCBI chr12:14,320,892...14,630,750
Ensembl chr12:14,320,892...14,630,703
JBrowse link
G Mad2l1bp MAD2L1 binding protein involved_in ISO (PMID:18022368) RGD PMID:18022368 NCBI chr 9:14,832,133...14,836,458
Ensembl chr 9:14,832,132...14,837,447
JBrowse link
G Prap1 proline-rich acidic protein 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:24374861)
UniProt
RGD
PMID:24374861 GO_REF:0000024 NCBI chr 1:194,883,078...194,886,874
Ensembl chr 1:194,883,078...194,886,872
JBrowse link
DNA conformation change term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in ISO (PMID:9558345) RGD PMID:9558345 NCBI chr 3:14,979,853...15,083,065
Ensembl chr 3:14,979,853...15,083,065
JBrowse link
G Hhex hematopoietically expressed homeobox involved_in ISO (PMID:18755198) RGD PMID:18755198 NCBI chr 1:235,190,455...235,196,042
Ensembl chr 1:235,190,455...235,196,042
JBrowse link
DNA duplex unwinding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa1 annexin A1 involved_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:20655937 PMID:21873635 RGD:7421590, RGD:13792537 NCBI chr 1:217,861,175...217,877,205
Ensembl chr 1:217,861,175...217,877,343
JBrowse link
G Ascc3 activating signal cointegrator 1 complex subunit 3 involved_in ISS
ISO
GO_REF:0000024
(PMID:22055184)
UniProt
RGD
PMID:22055184 GO_REF:0000024 NCBI chr20:53,510,137...53,795,446
Ensembl chr20:53,510,184...53,790,165
JBrowse link
G Atrx ATRX, chromatin remodeler involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr  X:70,850,981...70,997,330
Ensembl chr  X:70,850,981...70,997,330
JBrowse link
G Blm BLM RecQ like helicase involved_in ISO
IBA
(PMID:11735402), (PMID:24816114), (PMID:25901030)
PMID:21873635
RGD PMID:11735402 PMID:24816114 PMID:25901030 PMID:21873635 RGD:13792537 NCBI chr 1:134,409,832...134,496,073
Ensembl chr 1:134,409,857...134,484,312
JBrowse link
G Brip1 BRCA1 interacting helicase 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:70,907,266...71,031,502
Ensembl chr10:70,907,371...71,030,324
JBrowse link
G Chd1 chromodomain helicase DNA binding protein 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:56,661,743...56,729,119
Ensembl chr 1:56,664,054...56,728,125
JBrowse link
G Chd1l chromodomain helicase DNA binding protein 1-like involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 2:185,138,526...185,217,498
Ensembl chr 2:185,139,308...185,217,595
JBrowse link
G Chd2 chromodomain helicase DNA binding protein 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:127,188,146...127,317,041
Ensembl chr 1:127,190,059...127,300,502
JBrowse link
G Chd3 chromodomain helicase DNA binding protein 3 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:54,063,629...54,090,030
Ensembl chr10:54,063,629...54,090,047
JBrowse link
G Chd4 chromodomain helicase DNA binding protein 4 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 4:157,898,503...157,931,632
Ensembl chr 4:157,899,391...157,931,541
JBrowse link
G Chd5 chromodomain helicase DNA binding protein 5 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 5:162,848,273...162,898,997
Ensembl chr 5:162,848,394...162,896,291
JBrowse link
G Chd6 chromodomain helicase DNA binding protein 6 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 3:149,596,509...149,757,765
Ensembl chr 3:149,596,509...149,757,755
JBrowse link
G Chd7 chromodomain helicase DNA binding protein 7 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 5:21,812,007...21,995,358
Ensembl chr 5:21,812,070...21,995,358
JBrowse link
G Chd8 chromodomain helicase DNA binding protein 8 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr15:24,905,789...24,965,461
Ensembl chr15:24,905,789...24,951,285
JBrowse link
G Chd9 chromodomain helicase DNA binding protein 9 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr19:15,941,535...16,146,220
Ensembl chr19:15,942,687...16,164,556
JBrowse link
G Chtf18 chromosome transmission fidelity factor 18 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:14,743,006...14,751,044
Ensembl chr10:14,742,621...14,751,050
JBrowse link
G Chtf8 chromosome transmission fidelity factor 8 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr19:34,782,005...34,792,306
Ensembl chr19:34,781,856...34,792,578
JBrowse link
G Ddx1 DEAD-box helicase 1 involved_in ISO
ISS
(PMID:18710941)
GO_REF:0000024
RGD
UniProt
PMID:18710941 GO_REF:0000024 NCBI chr 6:35,996,469...36,027,340
Ensembl chr 6:35,996,469...36,027,365
JBrowse link
G Ddx11 DEAD/H-box helicase 11 involved_in ISO
IBA
(PMID:10648783), (PMID:18499658), (PMID:26503245)
PMID:21873635
RGD PMID:10648783 PMID:18499658 PMID:26503245 PMID:21873635 RGD:13792537 NCBI chr 9:105,833,234...105,862,844
Ensembl chr 9:105,833,504...105,862,550
JBrowse link
G Ddx3x DEAD-box helicase 3, X-linked involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr  X:9,479,532...9,493,455
Ensembl chr  X:9,479,532...9,493,168
JBrowse link
G Dhx36 DEAH-box helicase 36 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 2:146,856,469...146,894,577
Ensembl chr 2:146,856,469...146,894,572
JBrowse link
G Dhx9 DExH-box helicase 9 involved_in ISO (PMID:12711669), (PMID:21561811), (PMID:9111062) RGD PMID:9111062 PMID:12711669 PMID:21561811 NCBI chr13:65,602,322...65,639,098
Ensembl chr13:65,602,323...65,639,069
JBrowse link
G Dna2 DNA replication helicase/nuclease 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr20:25,661,652...25,690,598
Ensembl chr20:25,662,055...25,716,319
JBrowse link
G Dscc1 DNA replication and sister chromatid cohesion 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 7:86,482,588...86,498,212
Ensembl chr 7:86,482,588...86,498,212
JBrowse link
G Fancm FA complementation group M involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 6:83,126,903...83,180,455
Ensembl chr 6:83,127,093...83,180,028
JBrowse link
G Fbh1 F-box DNA helicase 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr17:66,749,506...66,787,590
Ensembl chr17:66,749,534...66,787,590
JBrowse link
G G3bp1 G3BP stress granule assembly factor 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:39,586,864...39,620,268
Ensembl chr10:39,586,864...39,620,268
JBrowse link
G Gtf2f2 general transcription factor IIF subunit 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr15:51,206,027...51,327,166
Ensembl chr15:51,206,031...51,327,253
JBrowse link
G Helb DNA helicase B involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000108
(MGI:2152689|PMID:11557815)
GOC
RGD
PMID:11557815 GO_REF:0000108 MGI:2152689 NCBI chr 7:55,588,510...55,615,979
Ensembl chr 7:55,588,798...55,615,585
JBrowse link
G Helq helicase, POLQ-like involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr14:8,818,582...8,862,926
Ensembl chr14:8,818,592...8,862,960
JBrowse link
G Helz2 helicase with zinc finger 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 3:168,338,813...168,353,219
Ensembl chr 3:168,338,813...168,353,159
JBrowse link
G Hfm1 helicase for meiosis 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr14:2,857,251...2,943,766
Ensembl chr14:2,856,599...2,939,238
JBrowse link
G Ighmbp2 immunoglobulin mu DNA binding protein 2 involved_in ISO
IEA
ISS
(PMID:30218034)
(PMID:19158098), (PMID:30218034)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:19158098 PMID:30218034 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:200,506,641...200,529,293
Ensembl chr 1:200,506,338...200,529,514
JBrowse link
G Mcm8 minichromosome maintenance 8 homologous recombination repair factor involved_in ISO
IEA
(PMID:26300262)
GO_REF:0000107
RGD
Ensembl
PMID:26300262 GO_REF:0000107 NCBI chr 3:120,086,741...120,117,008
Ensembl chr 3:120,086,763...120,117,008
JBrowse link
G Mcm9 minichromosome maintenance 9 homologous recombination repair factor involved_in ISO (PMID:26300262) RGD PMID:26300262 NCBI chr20:32,818,219...32,929,577
Ensembl chr20:32,844,951...32,929,600
JBrowse link
G Mcmdc1 minichromosome maintenance deficient domain containing 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002
G Mcmdc2 minichromosome maintenance domain containing 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 5:9,291,967...9,337,526
Ensembl chr 5:9,298,101...9,338,300
JBrowse link
G Mre11 MRE11 homolog, double strand break repair nuclease involved_in ISO
IEA
(PMID:15790808)
GO_REF:0000107
RGD
Ensembl
PMID:15790808 GO_REF:0000107 NCBI chr 8:11,618,876...11,680,451
Ensembl chr 8:11,632,354...11,678,279
JBrowse link
G Nav2 neuron navigator 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:98,957,629...99,322,339
Ensembl chr 1:98,663,759...99,322,337
JBrowse link
G Nbn nibrin involved_in IBA
IEA
ISO
PMID:21873635
GO_REF:0000107
(PMID:15790808)
Ensembl
RGD
PMID:15790808 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 5:29,459,574...29,494,152
Ensembl chr 5:29,459,457...29,494,150
JBrowse link
G Pif1 PIF1 5'-to-3' DNA helicase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:66,110,641...66,120,202
Ensembl chr 8:66,111,072...66,120,200
JBrowse link
G Polq DNA polymerase theta involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr11:63,673,796...63,775,905
Ensembl chr11:63,673,816...63,775,878
JBrowse link
G Pot1 protection of telomeres 1 involved_in ISO (PMID:16030011) RGD PMID:16030011 NCBI chr 4:54,205,330...54,263,137
Ensembl chr 4:54,205,332...54,263,042
JBrowse link
G Rad50 RAD50 double strand break repair protein involved_in ISO
IEA
IBA
(PMID:15790808)
GO_REF:0000107
PMID:21873635
RGD
Ensembl
PMID:15790808 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr10:37,809,353...37,861,309
Ensembl chr10:37,808,726...37,861,396
JBrowse link
G Recql RecQ like helicase involved_in IEA
IBA
GO_REF:0000108
PMID:21873635
GOC PMID:21873635 GO_REF:0000108, RGD:13792537 NCBI chr 4:175,308,337...175,332,965
Ensembl chr 4:175,304,117...175,332,945
JBrowse link
G Recql4 RecQ like helicase 4 involved_in ISO
IBA
(PMID:19177149)
PMID:21873635
RGD PMID:19177149 PMID:21873635 RGD:13792537 NCBI chr 7:108,423,453...108,430,790
Ensembl chr 7:108,423,455...108,430,619
JBrowse link
G Recql5 RecQ like helicase 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:101,126,544...101,165,739
Ensembl chr10:101,126,547...101,165,652
JBrowse link
G Rfc2 replication factor C subunit 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr12:22,120,449...22,133,576
Ensembl chr12:22,120,010...22,133,557
JBrowse link
G Rfc3 replication factor C subunit 3 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr12:1,000,987...1,011,778
Ensembl chr12:1,000,994...1,011,778
JBrowse link
G Rfc4 replication factor C subunit 4 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr11:77,749,642...77,764,123
Ensembl chr11:77,749,638...77,764,122
JBrowse link
G Rfc5 replication factor C subunit 5 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr12:39,207,484...39,217,041
Ensembl chr12:39,207,484...39,217,312
JBrowse link
G RGD1564855 similar to RuvB-like protein 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr  X:1,640,138...1,641,886
Ensembl chr  X:1,640,300...1,641,811
JBrowse link
G Rtel1 regulator of telomere elongation helicase 1 involved_in IBA
ISO
IEA
PMID:21873635
(MGI:5522574|PMID:24115439)
GO_REF:0000108
RGD
GOC
PMID:24115439 PMID:21873635 GO_REF:0000108 MGI:5522574, RGD:13792537 NCBI chr 3:168,427,247...168,465,349
Ensembl chr 3:168,419,579...168,465,348
JBrowse link
G Ruvbl1 RuvB-like AAA ATPase 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 4:120,932,486...120,967,400
Ensembl chr 4:120,932,417...121,029,384
JBrowse link
G Ruvbl2 RuvB-like AAA ATPase 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:95,902,014...95,915,364
Ensembl chr 1:95,901,701...95,915,342
JBrowse link
G Slc25a16 solute carrier family 25 member 16 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr20:25,661,158...25,717,558
Ensembl chr20:25,662,055...25,716,319
JBrowse link
G Smarcad1 SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1` involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 4:94,311,441...94,379,184
Ensembl chr 4:94,311,489...94,372,563
JBrowse link
G Sub1 SUB1 regulator of transcription involved_in ISO (PMID:16605275) RGD PMID:16605275 NCBI chr 2:61,005,646...61,020,486
Ensembl chr 2:61,005,666...61,020,436
Ensembl chr 2:61,005,666...61,020,436
JBrowse link
G Supv3l1 Suv3 like RNA helicase involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:12466530)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:12466530 GO_REF:0000024 GO_REF:0000107 NCBI chr20:30,378,542...30,399,076
Ensembl chr20:30,378,550...30,399,054
JBrowse link
G Trex1 three prime repair exonuclease 1 acts_upstream_of_or_within ISO (MGI:5637600|PMID:25848017) RGD PMID:25848017 MGI:5637600 NCBI chr 8:109,706,613...109,707,913
Ensembl chr 8:109,706,613...109,708,796
JBrowse link
G Twnk twinkle mtDNA helicase acts_upstream_of_or_within ISO (MGI:2136707|PMID:11431692) RGD PMID:11431692 MGI:2136707 NCBI chr 1:243,867,568...243,874,802
Ensembl chr 1:243,868,330...243,874,802
JBrowse link
G Upf1 UPF1, RNA helicase and ATPase involved_in ISO (PMID:30218034) RGD PMID:30218034 NCBI chr16:19,076,594...19,097,365
Ensembl chr16:19,076,322...19,096,568
JBrowse link
G Wrn WRN RecQ like helicase involved_in ISO
IBA
(PMID:11735402), (PMID:26420422)
PMID:21873635
RGD PMID:11735402 PMID:26420422 PMID:21873635 RGD:13792537 NCBI chr16:58,763,517...58,898,604
Ensembl chr16:58,763,504...58,895,450
JBrowse link
G Wrnip1 WRN helicase interacting protein 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr17:31,621,410...31,641,659
Ensembl chr17:31,621,411...31,641,659
JBrowse link
G Xrcc5 X-ray repair cross complementing 5 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 9:73,955,220...74,044,020
Ensembl chr 9:73,955,216...74,044,018
JBrowse link
G Xrcc6 X-ray repair cross complementing 6 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 7:113,542,992...113,563,762
Ensembl chr 7:113,543,057...113,563,762
JBrowse link
DNA geometric change term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hmgb1 high mobility group box 1 involved_in
acts_upstream_of_or_within
ISS
IDA
GO_REF:0000024
PMID:10962007
AgBase PMID:10962007 GO_REF:0000024, RGD:8554262 NCBI chr12:5,973,062...5,978,565
Ensembl chr12:5,901,586...5,978,565
JBrowse link
G LOC690117 similar to High mobility group protein 1 (HMG-1) (High mobility group protein B1) (Amphoterin) (Heparin-binding protein p30) involved_in ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr16:34,028,487...34,030,715
Ensembl chr16:34,028,446...34,030,648
JBrowse link
G Mterf1 mitochondrial transcription termination factor 1 involved_in ISO
ISS
(PMID:20550934)
GO_REF:0000024
RGD
UniProt
PMID:20550934 GO_REF:0000024 NCBI chr 4:30,226,345...30,233,402
Ensembl chr 4:30,226,343...30,233,584
JBrowse link
DNA methylation-dependent heterochromatin assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnmt1 DNA methyltransferase 1 involved_in ISO
IEA
(MGI:3687778|PMID:10615135)
GO_REF:0000107
RGD
Ensembl
PMID:10615135 GO_REF:0000107 MGI:3687778 NCBI chr 8:19,440,611...19,486,659
Ensembl chr 8:19,440,611...19,486,659
JBrowse link
G Dnmt3a DNA methyltransferase 3 alpha acts_upstream_of_or_within ISO MGI:1261819 (MGI:3611125|PMID:16322236), (MGI:3768461|PMID:17938196) RGD PMID:16322236 PMID:17938196 MGI:3611125 MGI:3768461 NCBI chr 6:26,791,517...26,902,161
Ensembl chr 6:26,822,609...26,896,687
JBrowse link
G Dnmt3b DNA methyltransferase 3 beta acts_upstream_of_or_within ISO MGI:1261827 (MGI:3768461|PMID:17938196) RGD PMID:17938196 MGI:3768461 NCBI chr 3:142,130,592...142,169,124
Ensembl chr 3:142,130,592...142,169,124
JBrowse link
G Hdac1 histone deacetylase 1 involved_in ISO UniProtKB:Q9UBB5 (PMID:23770133) RGD PMID:23770133 NCBI chr 5:141,853,992...141,881,057
Ensembl chr 5:141,853,989...141,881,111
JBrowse link
G Hells helicase, lymphoid specific involved_in IBA
ISO
PMID:21873635
(MGI:3573964|PMID:15647320)
RGD PMID:15647320 PMID:21873635 MGI:3573964, RGD:13792537 NCBI chr 1:236,701,704...236,748,239
Ensembl chr 1:236,701,758...236,746,844
JBrowse link
G Kmt2b lysine methyltransferase 2B acts_upstream_of_or_within ISO MGI:3056522|MGI:3623309 (MGI:4849597|PMID:20808952) RGD PMID:20808952 MGI:4849597 NCBI chr 1:85,821,700...85,840,987
Ensembl chr 1:85,821,753...85,841,326
JBrowse link
G Mbd2 methyl-CpG binding domain protein 2 involved_in ISO UniProtKB:Q13547 (PMID:23770133) RGD PMID:23770133 NCBI chr18:64,174,002...64,240,795
Ensembl chr18:64,174,002...64,240,794
JBrowse link
G Mbd3 methyl-CpG binding domain protein 3 acts_upstream_of_or_within ISO (MGI:3611125|PMID:16322236) RGD PMID:16322236 MGI:3611125 NCBI chr 7:9,312,961...9,320,166
Ensembl chr 7:9,313,098...9,320,165
JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 acts_upstream_of_or_within ISO (MGI:3611125|PMID:16322236) RGD PMID:16322236 MGI:3611125 NCBI chr 8:20,167,717...20,258,975
Ensembl chr 8:20,167,717...20,258,975
JBrowse link
DNA replication-dependent chromatin assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asf1a anti-silencing function 1A histone chaperone involved_in IBA
ISO
PMID:21873635
(PMID:14718166)
RGD PMID:14718166 PMID:21873635 RGD:13792537 NCBI chr20:32,893,962...32,908,808
Ensembl chr20:32,893,573...32,908,808
JBrowse link
G Asf1b anti-silencing function 1B histone chaperone involved_in ISO
IBA
(PMID:14718166)
PMID:21873635
RGD PMID:14718166 PMID:21873635 RGD:13792537 NCBI chr19:24,181,024...24,195,604
Ensembl chr19:24,181,028...24,195,549
JBrowse link
G Chaf1a chromatin assembly factor 1 subunit A involved_in ISO (PMID:14718166) RGD PMID:14718166 NCBI chr 9:873,953...900,701
Ensembl chr 9:874,051...900,654
JBrowse link
G Chaf1b chromatin assembly factor 1 subunit B involved_in ISO (PMID:14718166) RGD PMID:14718166 NCBI chr11:33,200,894...33,221,076
Ensembl chr11:33,200,981...33,221,070
JBrowse link
G H3c1 H3 clustered histone 1 involved_in ISO (PMID:14718166) RGD PMID:14718166 NCBI chr17:41,367,824...41,368,902
Ensembl chr17:41,368,386...41,368,856
JBrowse link
G H4c3 H4 clustered histone 3 involved_in ISO (PMID:14718166) RGD PMID:14718166
G H4f16 H4 histone 16 involved_in ISO (PMID:14718166) RGD PMID:14718166
G Hat1 histone acetyltransferase 1 involved_in ISO (PMID:14718166) RGD PMID:14718166 NCBI chr 3:56,217,344...56,265,021
Ensembl chr 3:56,217,342...56,275,517
JBrowse link
G Hist1h2ail1 histone cluster 1 H2a family member I like 1 involved_in ISO (PMID:14718166) RGD PMID:14718166 NCBI chr17:41,568,666...41,569,076
Ensembl chr17:41,568,471...41,569,109
JBrowse link
G Hist1h3b histone cluster 1, H3b involved_in ISO (PMID:14718166) RGD PMID:14718166 NCBI chr17:42,722,805...42,723,925
Ensembl chr17:42,723,450...42,723,911
JBrowse link
G Hist1h4b histone cluster 1 H4 family member B involved_in ISO (PMID:14718166) RGD PMID:14718166 NCBI chr17:42,480,467...42,484,912
Ensembl chr17:42,480,313...42,485,370
JBrowse link
G Hist1h4m histone cluster 1, H4m involved_in ISO (PMID:14718166) RGD PMID:14718166 NCBI chr17:42,698,054...42,698,365
Ensembl chr17:42,698,025...42,698,958
JBrowse link
G Hist2h4 histone cluster 2, H4 involved_in ISO (PMID:14718166) RGD PMID:14718166 NCBI chr 2:183,831,601...183,831,996
Ensembl chr 2:183,825,994...183,832,048
JBrowse link
G Hist2h4a histone cluster 2 H4 family member A involved_in ISO (PMID:14718166) RGD PMID:14718166
G Ipo4 importin 4 involved_in ISO (PMID:14718166) RGD PMID:14718166 NCBI chr15:29,117,365...29,127,382
Ensembl chr15:29,117,365...29,127,285
JBrowse link
G LOC100912290 histone H4-like involved_in ISO (PMID:14718166) RGD PMID:14718166
G LOC102548682 histone H4-like involved_in ISO (PMID:14718166) RGD PMID:14718166 NCBI chr17:41,368,743...41,426,735 JBrowse link
G LOC102551184 histone H4-like involved_in ISO (PMID:14718166) RGD PMID:14718166 NCBI chr17:41,526,192...41,575,488 JBrowse link
G LOC684819 similar to H3 histone, family 2 isoform 2 involved_in ISO (PMID:14718166) RGD PMID:14718166
G LOC684841 similar to CG31613-PA involved_in ISO (PMID:14718166) RGD PMID:14718166
G Nasp nuclear autoantigenic sperm protein acts_upstream_of_or_within
involved_in
ISS
ISO
IBA
GO_REF:0000024
(MGI:3694318|PMID:16728391)
PMID:21873635
(PMID:14718166)
UniProt
RGD
PMID:14718166 PMID:16728391 PMID:21873635 GO_REF:0000024 MGI:3694318, RGD:13792537 NCBI chr 5:130,057,363...130,083,003
Ensembl chr 5:130,057,363...130,082,928
JBrowse link
G Rbbp4 RB binding protein 4, chromatin remodeling factor involved_in ISO (PMID:14718166) RGD PMID:14718166 NCBI chr 5:141,655,863...141,675,157
Ensembl chr 5:141,638,421...141,675,284
JBrowse link
G RGD1562378 histone H4 variant H4-v.1 involved_in ISO (PMID:14718166) RGD PMID:14718166
DNA replication-independent chromatin assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asf1a anti-silencing function 1A histone chaperone involved_in ISO
IBA
(PMID:14718166)
PMID:21873635
RGD PMID:14718166 PMID:21873635 RGD:13792537 NCBI chr20:32,893,962...32,908,808
Ensembl chr20:32,893,573...32,908,808
JBrowse link
G Asf1b anti-silencing function 1B histone chaperone involved_in ISO
IBA
(PMID:14718166)
PMID:21873635
RGD PMID:14718166 PMID:21873635 RGD:13792537 NCBI chr19:24,181,024...24,195,604
Ensembl chr19:24,181,028...24,195,549
JBrowse link
G Atrx ATRX, chromatin remodeler involved_in ISS
ISO
GO_REF:0000024
(PMID:22391447)
UniProt
RGD
PMID:22391447 GO_REF:0000024 NCBI chr  X:70,850,981...70,997,330
Ensembl chr  X:70,850,981...70,997,330
JBrowse link
G Cabin1 calcineurin binding protein 1 involved_in IBA
ISO
IEA
PMID:21873635
(PMID:14718166)
GO_REF:0000002
RGD
InterPro
PMID:14718166 PMID:21873635 GO_REF:0000002, RGD:13792537 NCBI chr20:12,893,314...13,015,357
Ensembl chr20:12,893,358...13,015,357
JBrowse link
G H3f3a H3.3 histone A involved_in ISO (PMID:14718166) RGD PMID:14718166 NCBI chr13:92,533,294...92,544,903
Ensembl chr13:92,533,298...92,544,908
JBrowse link
G H3f3b H3.3 histone B involved_in ISO (PMID:14718166) RGD PMID:14718166 NCBI chr10:101,256,488...101,258,712
Ensembl chr10:101,256,480...101,258,709
JBrowse link
G H4c3 H4 clustered histone 3 involved_in ISO (PMID:14718166) RGD PMID:14718166
G H4f16 H4 histone 16 involved_in ISO (PMID:14718166) RGD PMID:14718166
G Hat1 histone acetyltransferase 1 involved_in ISO (PMID:14718166) RGD PMID:14718166 NCBI chr 3:56,217,344...56,265,021
Ensembl chr 3:56,217,342...56,275,517
JBrowse link
G Hira histone cell cycle regulator involved_in IBA
ISO
PMID:21873635
(PMID:14718166)
RGD PMID:14718166 PMID:21873635 RGD:13792537 NCBI chr11:82,024,469...82,133,212
Ensembl chr11:82,024,469...82,133,529
JBrowse link
G Hist1h4b histone cluster 1 H4 family member B involved_in ISO (PMID:14718166) RGD PMID:14718166 NCBI chr17:42,480,467...42,484,912
Ensembl chr17:42,480,313...42,485,370
JBrowse link
G Hist1h4m histone cluster 1, H4m involved_in ISO (PMID:14718166) RGD PMID:14718166 NCBI chr17:42,698,054...42,698,365
Ensembl chr17:42,698,025...42,698,958
JBrowse link
G Hist2h4 histone cluster 2, H4 involved_in ISO (PMID:14718166) RGD PMID:14718166 NCBI chr 2:183,831,601...183,831,996
Ensembl chr 2:183,825,994...183,832,048
JBrowse link
G Hist2h4a histone cluster 2 H4 family member A involved_in ISO (PMID:14718166) RGD PMID:14718166
G Ipo4 importin 4 involved_in ISO (PMID:14718166) RGD PMID:14718166 NCBI chr15:29,117,365...29,127,382
Ensembl chr15:29,117,365...29,127,285
JBrowse link
G LOC100912290 histone H4-like involved_in ISO (PMID:14718166) RGD PMID:14718166
G LOC102548682 histone H4-like involved_in ISO (PMID:14718166) RGD PMID:14718166 NCBI chr17:41,368,743...41,426,735 JBrowse link
G LOC102551184 histone H4-like involved_in ISO (PMID:14718166) RGD PMID:14718166 NCBI chr17:41,526,192...41,575,488 JBrowse link
G Nasp nuclear autoantigenic sperm protein involved_in ISO (PMID:14718166) RGD PMID:14718166 NCBI chr 5:130,057,363...130,083,003
Ensembl chr 5:130,057,363...130,082,928
JBrowse link
G Rbbp4 RB binding protein 4, chromatin remodeling factor involved_in ISO (PMID:14718166) RGD PMID:14718166 NCBI chr 5:141,655,863...141,675,157
Ensembl chr 5:141,638,421...141,675,284
JBrowse link
G RGD1562378 histone H4 variant H4-v.1 involved_in ISO (PMID:14718166) RGD PMID:14718166
G Ubn1 ubinuclein 1 involved_in ISO
IBA
(PMID:14718166)
PMID:21873635
RGD PMID:14718166 PMID:21873635 RGD:13792537 NCBI chr10:10,496,576...10,532,010
Ensembl chr10:10,496,576...10,532,010
JBrowse link
G Ubn2 ubinuclein 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:67,165,278...67,251,562
Ensembl chr 4:67,166,346...67,230,491
JBrowse link
DNA replication-independent chromatin organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Supt16h SPT16 homolog, facilitates chromatin remodeling subunit involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:24,867,697...24,904,818
Ensembl chr15:24,866,489...24,904,846
JBrowse link
DNA rewinding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zranb3 zinc finger RANBP2-type containing 3 involved_in ISO (PMID:21078962), (PMID:22705370) RGD PMID:21078962 PMID:22705370 NCBI chr13:39,440,653...39,595,782
Ensembl chr13:39,440,889...39,595,670
JBrowse link
DNA topological change term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ercc3 ERCC excision repair 3, TFIIH core complex helicase subunit involved_in ISO (PMID:8663148) RGD PMID:8663148 NCBI chr18:23,883,613...23,914,326
Ensembl chr18:23,883,580...23,914,329
JBrowse link
G Hmgb2 high mobility group box 2 involved_in ISO
ISS
(PMID:11275566)
GO_REF:0000024
RGD
AgBase
PMID:11275566 GO_REF:0000024 NCBI chr16:32,710,651...32,713,230
Ensembl chr16:32,710,658...32,713,140
JBrowse link
G Hmgb2l1 high mobility group box 2-like 1 involved_in ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr11:47,252,583...47,253,646
Ensembl chr11:47,252,569...47,253,669
JBrowse link
G RGD1559962 similar to High mobility group protein 2 (HMG-2) involved_in ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr 1:19,409,285...19,410,183
Ensembl chr 1:19,409,539...19,410,168
JBrowse link
G Top1 DNA topoisomerase I acts_upstream_of_or_within
involved_in
IDA
ISO
IEA
IBA
(MGI:3612364|PMID:16261531), (MGI:70738|PMID:7842491)
GO_REF:0000104
PMID:21873635
(PMID:14594810), (PMID:14654701), (PMID:8567649), (PMID:8631793), (PMID:8631794), (PMID:9611241)
RGD
UniProt
PMID:7842491 PMID:8567649 PMID:8631793 PMID:8631794 PMID:9611241 More... GO_REF:0000104 MGI:3612364 MGI:70738, RGD:1580856, RGD:13792537 NCBI chr 3:149,293,658...149,375,405
Ensembl chr 3:149,293,403...149,376,623
JBrowse link
G Top1mt DNA topoisomerase I mitochondrial involved_in IEA
IBA
GO_REF:0000104
PMID:21873635
UniProt PMID:21873635 GO_REF:0000104, RGD:13792537 NCBI chr 7:107,338,092...107,368,125
Ensembl chr 7:107,342,527...107,366,049
JBrowse link
G Top2a DNA topoisomerase II alpha acts_upstream_of_or_within
involved_in
IDA
ISO
IEA
(MGI:51613|PMID:1331984), (MGI:895157|PMID:9224616)
(PMID:12711669), (PMID:22323612)
GO_REF:0000104
RGD
UniProt
PMID:1331984 PMID:9224616 PMID:12711669 PMID:22323612 PMID:11334111 GO_REF:0000104 MGI:51613 MGI:895157, RGD:1580614 NCBI chr10:83,946,186...83,975,694
Ensembl chr10:83,945,735...83,976,874
JBrowse link
G Top2b DNA topoisomerase II beta involved_in ISO (PMID:10684600) RGD PMID:10684600 NCBI chr15:9,051,661...9,111,220
Ensembl chr15:9,051,341...9,112,085
JBrowse link
G Top3a DNA topoisomerase III alpha involved_in ISO
IBA
(PMID:20445207)
PMID:21873635
RGD PMID:20445207 PMID:21873635 RGD:13792537 NCBI chr10:45,419,219...45,457,356
Ensembl chr10:45,419,217...45,457,559
JBrowse link
G Top3b DNA topoisomerase III beta involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:84,097,018...84,125,474
Ensembl chr11:84,097,026...84,125,392
JBrowse link
DNA unwinding involved in DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Blm BLM RecQ like helicase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:134,409,832...134,496,073
Ensembl chr 1:134,409,857...134,484,312
JBrowse link
G Cdc45 cell division cycle 45 involved_in ISO (PMID:22474384) RGD PMID:22474384 NCBI chr11:82,185,427...82,210,630
Ensembl chr11:82,185,473...82,210,619
JBrowse link
G Gins1 GINS complex subunit 1 involved_in ISO (PMID:22474384) RGD PMID:22474384 NCBI chr 3:139,724,513...139,745,930
Ensembl chr 3:139,724,490...139,745,936
JBrowse link
G Gins2 GINS complex subunit 2 involved_in ISO (PMID:22474384) RGD PMID:22474384 NCBI chr19:48,626,770...48,639,523
Ensembl chr19:48,626,770...48,639,339
JBrowse link
G Gins3 GINS complex subunit 3 involved_in ISO (PMID:22474384) RGD PMID:22474384 NCBI chr19:9,420,085...9,428,621
Ensembl chr19:9,420,086...9,428,687
JBrowse link
G Gins4 GINS complex subunit 4 involved_in ISO
IEA
(PMID:22474384)
GO_REF:0000107
RGD
Ensembl
PMID:22474384 GO_REF:0000107 NCBI chr16:68,787,572...68,799,938
Ensembl chr16:68,767,339...68,802,273
JBrowse link
G Mcm2 minichromosome maintenance complex component 2 acts_upstream_of_or_within
involved_in
ISO
IBA
(MGI:2156014|PMID:10531422)
PMID:21873635
(PMID:22474384)
RGD PMID:10531422 PMID:22474384 PMID:21873635 MGI:2156014, RGD:13792537 NCBI chr 4:121,346,434...121,360,962
Ensembl chr 4:121,346,434...121,360,847
JBrowse link
G Mcm3 minichromosome maintenance complex component 3 involved_in ISO (PMID:22474384) RGD PMID:22474384 NCBI chr 9:23,219,169...23,237,314
Ensembl chr 9:23,219,169...23,237,314
JBrowse link
G Mcm4 minichromosome maintenance complex component 4 acts_upstream_of_or_within
involved_in
ISO
IBA
PR:P97311|PR:Q61881 (MGI:3582148|PMID:15917436)
PMID:21873635
(PMID:22474384)
RGD PMID:15917436 PMID:22474384 PMID:21873635 MGI:3582148, RGD:13792537 NCBI chr11:85,258,443...85,272,144
Ensembl chr11:85,258,443...85,272,144
JBrowse link
G Mcm5 minichromosome maintenance complex component 5 involved_in ISO (PMID:22474384) RGD PMID:22474384 NCBI chr19:13,483,030...13,504,389
Ensembl chr19:13,483,066...13,504,389
JBrowse link
G Mcm6 minichromosome maintenance complex component 6 involved_in
acts_upstream_of_or_within
IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
(PMID:22474384)
PR:P49717|PR:Q61881 (MGI:3582148|PMID:15917436)
Ensembl
RGD
PMID:15917436 PMID:22474384 PMID:21873635 GO_REF:0000107 MGI:3582148, RGD:13792537 NCBI chr13:39,826,745...39,851,937
Ensembl chr13:39,826,763...39,851,960
JBrowse link
G Mcm7 minichromosome maintenance complex component 7 acts_upstream_of_or_within
involved_in
ISO
IBA
PR:P49717|PR:P97311 (MGI:3582148|PMID:15917436)
PMID:21873635
(PMID:22474384)
RGD PMID:15917436 PMID:22474384 PMID:21873635 MGI:3582148, RGD:13792537 NCBI chr12:17,042,207...17,049,470
Ensembl chr12:17,042,212...17,050,063
JBrowse link
G Pura purine rich element binding protein A involved_in ISO (PMID:15777841) RGD PMID:15777841 NCBI chr18:27,884,618...27,905,500
Ensembl chr18:27,884,556...27,905,513
JBrowse link
G Rad51 RAD51 recombinase involved_in ISO (PMID:7988572) RGD PMID:7988572 NCBI chr 3:106,099,753...106,125,038
Ensembl chr 3:106,100,381...106,125,035
JBrowse link
G Recql RecQ like helicase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:175,308,337...175,332,965
Ensembl chr 4:175,304,117...175,332,945
JBrowse link
G Recql4 RecQ like helicase 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:108,423,453...108,430,790
Ensembl chr 7:108,423,455...108,430,619
JBrowse link
G Recql5 RecQ like helicase 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:101,126,544...101,165,739
Ensembl chr10:101,126,547...101,165,652
JBrowse link
G Rpa1 replication protein A1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:60,148,869...60,199,999
Ensembl chr10:60,148,793...60,199,949
JBrowse link
G Ssbp1 single stranded DNA binding protein 1 involved_in ISO (PMID:26446790) RGD PMID:26446790 NCBI chr 4:69,266,024...69,276,135
Ensembl chr 4:69,266,102...69,276,135
JBrowse link
G Twnk twinkle mtDNA helicase involved_in
acts_upstream_of_or_within
ISO (PMID:15167897)
(MGI:2136707|PMID:11431692)
RGD PMID:11431692 PMID:15167897 MGI:2136707 NCBI chr 1:243,867,568...243,874,802
Ensembl chr 1:243,868,330...243,874,802
JBrowse link
G Wrn WRN RecQ like helicase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:58,763,517...58,898,604
Ensembl chr16:58,763,504...58,895,450
JBrowse link
dosage compensation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Macroh2a1 macroH2A.1 histone acts_upstream_of_or_within ISO (PMID:15053874) RGD PMID:15053874 NCBI chr17:8,479,331...8,542,071
Ensembl chr17:8,479,372...8,542,072
JBrowse link
G Macroh2a2 macroH2A.2 histone acts_upstream_of_or_within ISO (PMID:11331621) RGD PMID:11331621 NCBI chr20:29,678,194...29,727,867
Ensembl chr20:29,678,222...29,727,891
JBrowse link
dosage compensation by inactivation of X chromosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brca1 BRCA1, DNA repair associated involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
PMID:21873635
(MGI:2389513|PMID:12419249)
GO_REF:0000107
RGD
Ensembl
PMID:12419249 PMID:21873635 GO_REF:0000107 MGI:2389513, RGD:13792537 NCBI chr10:86,417,441...86,477,762
Ensembl chr10:86,418,000...86,477,304
JBrowse link
G Eif1 eukaryotic translation initiation factor 1 acts_upstream_of_or_within ISO (MGI:3694307|PMID:16789828) RGD PMID:16789828 MGI:3694307 NCBI chr10:85,246,751...85,248,842
Ensembl chr10:85,246,764...85,427,327
JBrowse link
G Exosc10 exosome component 10 acts_upstream_of_or_within ISO (MGI:3694307|PMID:16789828) RGD PMID:16789828 MGI:3694307 NCBI chr 5:158,995,318...159,018,946
Ensembl chr 5:158,995,313...159,018,940
JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U involved_in ISO (MGI:4831049|PMID:20833368) RGD PMID:20833368 MGI:4831049 NCBI chr13:90,069,058...90,086,905
Ensembl chr13:90,074,181...90,086,588
JBrowse link
G Jarid2 jumonji and AT-rich interaction domain containing 2 acts_upstream_of_or_within ISO MGI:5888989 (MGI:5888829|PMID:27892467) RGD PMID:27892467 MGI:5888829 NCBI chr17:19,777,487...19,957,696
Ensembl chr17:19,777,266...19,955,690
JBrowse link
G Lrif1 ligand dependent nuclear receptor interacting factor 1 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:23542155)
UniProt
Ensembl
RGD
PMID:23542155 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:194,231,397...194,322,489
Ensembl chr 2:194,230,951...194,322,483
JBrowse link
G Mettl3 methyltransferase-like 3 involved_in ISO (PMID:27602518) RGD PMID:27602518 NCBI chr15:25,002,505...25,014,097
Ensembl chr15:25,003,172...25,014,041
JBrowse link
G Rbm15 RNA binding motif protein 15 involved_in ISO (PMID:27602518) RGD PMID:27602518 NCBI chr 2:194,945,717...194,954,523
Ensembl chr 2:194,945,974...194,954,703
JBrowse link
G Rbm15b RNA binding motif protein 15B involved_in ISO (PMID:27602518) RGD PMID:27602518 NCBI chr 8:107,543,542...107,548,195
Ensembl chr 8:107,525,898...107,551,696
JBrowse link
G Smchd1 structural maintenance of chromosomes flexible hinge domain containing 1 involved_in
acts_upstream_of_or_within
ISO (PMID:23542155)
MGI:3586547 (MGI:3821390|PMID:18425126), (MGI:5532809|PMID:23754746)
RGD PMID:18425126 PMID:23542155 PMID:23754746 MGI:3821390 MGI:5532809 NCBI chr 9:111,243,445...111,387,272
Ensembl chr 9:111,247,702...111,349,665
JBrowse link
G Suz12 SUZ12 polycomb repressive complex 2 subunit acts_upstream_of_or_within ISO (MGI:5888829|PMID:27892467) RGD PMID:27892467 MGI:5888829 NCBI chr10:64,967,035...65,012,916
Ensembl chr10:64,966,967...65,012,738
JBrowse link
G Upf1 UPF1, RNA helicase and ATPase acts_upstream_of_or_within ISO (MGI:3694307|PMID:16789828) RGD PMID:16789828 MGI:3694307 NCBI chr16:19,076,594...19,097,365
Ensembl chr16:19,076,322...19,096,568
JBrowse link
G Ythdc1 YTH domain containing 1 involved_in ISO
ISS
(PMID:27602518)
GO_REF:0000024
RGD
UniProt
PMID:27602518 GO_REF:0000024 NCBI chr14:21,185,438...21,215,934
Ensembl chr14:21,185,440...21,216,028
JBrowse link
epigenetic maintenance of chromatin in transcription-competent conformation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chek1 checkpoint kinase 1 involved_in ISO
ISS
(MGI:5294291|PMID:18243098)
GO_REF:0000024
RGD
UniProt
PMID:18243098 GO_REF:0000024 MGI:5294291 NCBI chr 8:36,420,565...36,443,477
Ensembl chr 8:36,420,569...36,441,009
JBrowse link
G Ep300 E1A binding protein p300 involved_in ISO (PMID:25818647) RGD PMID:25818647 NCBI chr 7:113,108,476...113,178,529
Ensembl chr 7:113,106,247...113,136,088
Ensembl chr 7:113,106,247...113,136,088
JBrowse link
G Fam47a family with sequence similarity 47, member A involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:42,762,231...42,763,887
Ensembl chr  X:42,762,229...42,763,883
JBrowse link
G Fam47e family with sequence similarity 47, member E involved_in ISO (PMID:33376131) RGD PMID:33376131 NCBI chr14:15,485,537...15,521,599
Ensembl chr14:15,485,127...15,521,775
JBrowse link
G LOC102552474 protein FAM47E-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:13,775,705...13,777,481
Ensembl chr  X:13,776,114...13,777,409
JBrowse link
G Macroh2a1 macroH2A.1 histone involved_in ISO (PMID:25526730) RGD PMID:25526730 NCBI chr17:8,479,331...8,542,071
Ensembl chr17:8,479,372...8,542,072
JBrowse link
G Nr3c1 nuclear receptor subfamily 3, group C, member 1 involved_in IMP PMID:12917342 UniProt PMID:12917342 RGD:8553888 NCBI chr18:31,271,681...31,393,320
Ensembl chr18:31,271,681...31,393,375
JBrowse link
G Pabpc1l poly(A) binding protein, cytoplasmic 1-like acts_upstream_of_or_within ISO MGI:5437740 (MGI:5688228|PMID:26134869) RGD PMID:26134869 MGI:5688228 NCBI chr 3:152,692,825...152,725,997
Ensembl chr 3:152,693,700...152,725,997
JBrowse link
G Padi2 peptidyl arginine deiminase 2 involved_in ISO
IEA
(PMID:22853951)
GO_REF:0000107
RGD
Ensembl
PMID:22853951 GO_REF:0000107 NCBI chr 5:153,209,053...153,251,632
Ensembl chr 5:153,209,053...153,251,632
JBrowse link
G Phf2 PHD finger protein 2 involved_in ISO (MGI:6716956|PMID:22921934) RGD PMID:22921934 MGI:6716956 NCBI chr17:15,783,221...15,851,209
Ensembl chr17:15,781,864...15,851,208
JBrowse link
G Smarcd1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 involved_in ISO (PMID:12917342) RGD PMID:12917342 NCBI chr 7:130,829,783...130,840,323
Ensembl chr 7:130,829,768...130,840,323
JBrowse link
G Sphk2 sphingosine kinase 2 involved_in ISO (PMID:19729656) RGD PMID:19729656 NCBI chr 1:96,180,872...96,188,592
Ensembl chr 1:96,180,887...96,188,391
JBrowse link
G Vps72 vacuolar protein sorting 72 homolog involved_in ISO
IEA
UniProtKB:P06899|UniProtKB:P0C0S5 (PMID:26974126)
GO_REF:0000107
RGD
Ensembl
PMID:26974126 GO_REF:0000107 NCBI chr 2:182,678,594...182,690,185
Ensembl chr 2:182,678,609...182,690,182
JBrowse link
G Wbp2 WW domain binding protein 2 involved_in ISO
IEA
(PMID:23233354)
GO_REF:0000107
RGD
Ensembl
PMID:23233354 GO_REF:0000107 NCBI chr10:101,312,476...101,320,775
Ensembl chr10:101,312,446...101,320,736
JBrowse link
establishment of mitotic sister chromatid cohesion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Naa50 N(alpha)-acetyltransferase 50, NatE catalytic subunit involved_in ISO (PMID:27422821) RGD PMID:27422821 NCBI chr11:56,538,366...56,560,842
Ensembl chr11:56,538,366...56,560,842
JBrowse link
G Nipbl NIPBL, cohesin loading factor involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:57,399,443...57,586,770
Ensembl chr 2:57,399,445...57,565,899
JBrowse link
establishment of sister chromatid cohesion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddx11 DEAD/H-box helicase 11 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:105,833,234...105,862,844
Ensembl chr 9:105,833,504...105,862,550
JBrowse link
female meiosis sister chromatid cohesion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rad51c RAD51 paralog C acts_upstream_of_or_within ISO MGI:3707422|MGI:3707425 (MGI:3703317|PMID:17312021) RGD PMID:17312021 MGI:3703317 NCBI chr10:72,205,032...72,231,643
Ensembl chr10:72,205,032...72,231,248
JBrowse link
G Sycp3 synaptonemal complex protein 3 involved_in ISO (MGI:3578071|PMID:15870106) RGD PMID:15870106 MGI:3578071 NCBI chr 7:22,874,055...22,888,512
Ensembl chr 7:22,874,055...22,888,511
JBrowse link
G-quadruplex DNA unwinding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Blm BLM RecQ like helicase involved_in ISO
IBA
(PMID:11735402)
PMID:21873635
UniProtKB:O09053 (MGI:5700122|PMID:26195664)
RGD PMID:11735402 PMID:26195664 PMID:21873635 MGI:5700122, RGD:13792537 NCBI chr 1:134,409,832...134,496,073
Ensembl chr 1:134,409,857...134,484,312
JBrowse link
G Ddx11 DEAD/H-box helicase 11 involved_in ISO (PMID:26503245) RGD PMID:26503245 NCBI chr 9:105,833,234...105,862,844
Ensembl chr 9:105,833,504...105,862,550
JBrowse link
G Dhx36 DEAH-box helicase 36 involved_in ISO
ISS
(PMID:16150737), (PMID:18842585)
(MGI:6201778|PMID:25611385)
GO_REF:0000024
RGD
UniProt
PMID:16150737 PMID:18842585 PMID:25611385 GO_REF:0000024 MGI:6201778 NCBI chr 2:146,856,469...146,894,577
Ensembl chr 2:146,856,469...146,894,572
JBrowse link
G Dhx9 DExH-box helicase 9 involved_in ISO (PMID:21561811) RGD PMID:21561811 NCBI chr13:65,602,322...65,639,098
Ensembl chr13:65,602,323...65,639,069
JBrowse link
G Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 involved_in IDA PMID:23184978 BHF-UCL PMID:23184978 RGD:11567256 NCBI chr 4:80,534,659...80,545,297
Ensembl chr 4:80,534,651...80,545,249
JBrowse link
G Wrn WRN RecQ like helicase involved_in ISO
IBA
(PMID:11735402)
UniProtKB:O88700 (MGI:5700122|PMID:26195664)
PMID:21873635
RGD PMID:11735402 PMID:26195664 PMID:21873635 MGI:5700122, RGD:13792537 NCBI chr16:58,763,517...58,898,604
Ensembl chr16:58,763,504...58,895,450
JBrowse link
genomic imprinting term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asip agouti signaling protein acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:1855930|MGI:1855937 (MGI:2652932|PMID:12601169)
GO_REF:0000107
RGD
Ensembl
PMID:12601169 GO_REF:0000107 MGI:2652932 NCBI chr 3:143,473,584...143,561,170
Ensembl chr 3:143,555,696...143,561,171
JBrowse link
G Axin1 axin 1 acts_upstream_of_or_within ISO MGI:1856035 (MGI:2652932|PMID:12601169) RGD PMID:12601169 MGI:2652932 NCBI chr10:15,163,684...15,215,615
Ensembl chr10:15,163,684...15,215,615
JBrowse link
G Cdkn1c cyclin-dependent kinase inhibitor 1C acts_upstream_of_or_within ISO MGI:1933758|MGI:3840687 (MGI:3839493|PMID:19276117) RGD PMID:19276117 MGI:3839493 NCBI chr 1:198,655,394...198,658,097
Ensembl chr 1:198,655,407...198,658,048
JBrowse link
G Ctcf CCCTC-binding factor involved_in ISO (PMID:17827499) RGD PMID:17827499 NCBI chr19:33,521,726...33,571,124
Ensembl chr19:33,529,319...33,571,123
JBrowse link
G Dnmt3l DNA methyltransferase 3 like acts_upstream_of_or_within ISO MGI:2447127 (MGI:3663953|PMID:16920095) RGD PMID:16920095 MGI:3663953 NCBI chr20:10,614,933...10,629,516
Ensembl chr20:10,614,934...10,629,516
JBrowse link
G Gnas GNAS complex locus acts_upstream_of_or_within ISO MGI:4459474 (MGI:4454202|PMID:20427744) RGD PMID:20427744 MGI:4454202 NCBI chr 3:163,071,003...163,136,350
Ensembl chr 3:163,071,417...163,127,262
Ensembl chr 3:163,071,417...163,127,262
JBrowse link
G Ndn necdin, MAGE family member acts_upstream_of_or_within ISO MGI:2653045|MGI:2653048 (MGI:1345919|PMID:10508517) RGD PMID:10508517 MGI:1345919 NCBI chr 1:115,849,168...115,850,767
Ensembl chr 1:115,849,105...115,850,767
JBrowse link
G Zdbf2 zinc finger, DBF-type containing 2 acts_upstream_of_or_within
involved_in
ISO
IBA
MGI:6161219 (MGI:6151717|PMID:27841881)
PMID:21873635
RGD PMID:27841881 PMID:21873635 MGI:6151717, RGD:13792537 NCBI chr 9:64,672,974...64,748,446
Ensembl chr 9:64,709,880...64,744,265
JBrowse link
G Zfp57 zinc finger protein 57 acts_upstream_of_or_within ISO MGI:3826984 (MGI:6506156|PMID:33500348) RGD PMID:33500348 MGI:6506156 NCBI chr20:1,521,323...1,534,884
Ensembl chr20:1,521,323...1,529,846
JBrowse link
heterochromatin assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07027368.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr17:26,135,927...26,136,235 JBrowse link
G Bahd1 bromo adjacent homology domain containing 1 involved_in ISO
IBA
(PMID:19666599)
PMID:21873635
RGD PMID:19666599 PMID:21873635 RGD:13792537 NCBI chr 3:105,891,207...105,914,414
Ensembl chr 3:105,892,478...105,914,410
JBrowse link
G Baz2a bromodomain adjacent to zinc finger domain, 2A acts_upstream_of_or_within ISO (MGI:3653583|PMID:16678107), (MGI:4462332|PMID:20168299) RGD PMID:16678107 PMID:20168299 MGI:3653583 MGI:4462332 NCBI chr 7:523,204...560,911
Ensembl chr 7:523,265...560,659
JBrowse link
G Cbx3 chromobox 3 involved_in ISO (PMID:17540172) RGD PMID:17540172 NCBI chr 4:80,545,450...80,559,284
Ensembl chr 4:80,546,010...80,559,283
JBrowse link
G Ctbp1 C-terminal binding protein 1 involved_in ISO
IEA
(PMID:21102443)
GO_REF:0000107
RGD
Ensembl
PMID:21102443 GO_REF:0000107 NCBI chr14:77,455,580...77,482,821
Ensembl chr14:77,455,696...77,482,821
JBrowse link
G Dot1l DOT1 like histone lysine methyltransferase involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 7:8,917,786...8,959,474
Ensembl chr 7:8,917,786...8,956,475
JBrowse link
G Ezh1 enhancer of zeste 1 polycomb repressive complex 2 subunit involved_in ISO
IBA
(MGI:3820717|PMID:19026781)
PMID:21873635
RGD PMID:19026781 PMID:21873635 MGI:3820717, RGD:13792537 NCBI chr10:86,126,023...86,162,001
Ensembl chr10:86,126,015...86,161,921
JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:76,624,399...76,687,362
Ensembl chr 4:76,624,399...76,687,362
JBrowse link
G H1f0 H1.0 linker histone involved_in ISO UniProtKB:P09429 (PMID:19158276) RGD PMID:19158276 NCBI chr 7:110,592,834...110,594,694
Ensembl chr 7:110,592,208...110,594,694
JBrowse link
G Hells helicase, lymphoid specific acts_upstream_of_or_within ISO MGI:2178586 (MGI:3510059|PMID:15448183) RGD PMID:15448183 MGI:3510059 NCBI chr 1:236,701,704...236,748,239
Ensembl chr 1:236,701,758...236,746,844
JBrowse link
G Hils1 histone linker H1 domain, spermatid-specific 1 involved_in ISO (PMID:12920187) RGD PMID:12920187 NCBI chr10:79,913,525...79,914,321
Ensembl chr10:79,913,480...79,914,321
JBrowse link
G Hmga2 high mobility group AT-hook 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:16901784)
UniProt
RGD
PMID:16901784 GO_REF:0000024 NCBI chr 7:55,877,145...55,998,813
Ensembl chr 7:55,880,112...55,994,784
JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO UniProtKB:P07305 (PMID:19158276) RGD PMID:19158276 NCBI chr12:5,973,062...5,978,565
Ensembl chr12:5,901,586...5,978,565
JBrowse link
G Kmt2d lysine methyltransferase 2D involved_in ISO (MGI:4849597|PMID:20808952) RGD PMID:20808952 MGI:4849597 NCBI chr 7:129,980,744...130,022,088
Ensembl chr 7:129,962,887...130,020,325
JBrowse link
G L3mbtl1 L3MBTL histone methyl-lysine binding protein 1 involved_in ISO (PMID:17540172) RGD PMID:17540172 NCBI chr 3:151,597,903...151,633,657
Ensembl chr 3:151,602,980...151,631,233
JBrowse link
G Lmna lamin A/C involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:173,939,751...173,960,423
Ensembl chr 2:173,939,751...173,960,423
JBrowse link
G Lmnb1 lamin B1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:50,175,861...50,215,210
Ensembl chr18:50,175,874...50,214,502
JBrowse link
G Lmnb2 lamin B2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:8,792,628...8,808,665
Ensembl chr 7:8,789,314...8,808,665
JBrowse link
G LOC100362333 DNA-directed DNA polymerase epsilon 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:109,236,160...109,236,825
Ensembl chr 7:109,236,321...109,236,758
JBrowse link
G Mecp2 methyl CpG binding protein 2 acts_upstream_of_or_within ISO MGI:2137311 (MGI:3530434|PMID:15608638) RGD PMID:15608638 MGI:3530434 NCBI chr  X:151,781,177...151,844,687
Ensembl chr  X:151,789,930...151,844,689
JBrowse link
G Pole3 DNA polymerase epsilon 3, accessory subunit involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:75,973,941...75,977,175
Ensembl chr 5:75,974,717...75,977,231
JBrowse link
G Ppm1d protein phosphatase, Mg2+/Mn2+ dependent, 1D involved_in ISO (MGI:5551345|PMID:24135283) RGD PMID:24135283 MGI:5551345 NCBI chr10:70,172,603...70,208,607
Ensembl chr10:70,172,603...70,208,607
JBrowse link
G Rb1 RB transcriptional corepressor 1 involved_in ISO
IEA
(PMID:17540172)
GO_REF:0000107
RGD
Ensembl
PMID:17540172 GO_REF:0000107 NCBI chr15:48,371,295...48,502,473
Ensembl chr15:48,371,296...48,502,302
JBrowse link
G RGD1560349 similar to histone-fold protein CHRAC17 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:26,135,927...26,136,417 JBrowse link
G Sirt1 sirtuin 1 involved_in ISO (PMID:15469825) RGD PMID:15469825 NCBI chr20:25,307,143...25,329,260
Ensembl chr20:25,306,917...25,329,260
JBrowse link
G Smarca5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 involved_in ISO (MGI:3653583|PMID:16678107) RGD PMID:16678107 MGI:3653583 NCBI chr19:27,271,918...27,304,594
Ensembl chr19:27,271,148...27,304,594
JBrowse link
G Spty2d1 SPT2 chromatin protein domain containing 1 involved_in ISO (PMID:26109053) RGD PMID:26109053 NCBI chr 1:97,531,495...97,549,633
Ensembl chr 1:97,531,508...97,549,581
JBrowse link
G Tnp1 transition protein 1 involved_in ISO
ISS
(PMID:11315969)
GO_REF:0000024
RGD
UniProt
PMID:11315969 GO_REF:0000024 NCBI chr 9:74,594,463...74,595,072
Ensembl chr 9:74,594,466...74,595,274
JBrowse link
G Ubr2 ubiquitin protein ligase E3 component n-recognin 2 involved_in ISO (MGI:4431162|PMID:20080676) RGD PMID:20080676 MGI:4431162 NCBI chr 9:13,982,427...14,062,315
Ensembl chr 9:13,982,329...14,062,139
JBrowse link
G Uty ubiquitously transcribed tetratricopeptide repeat containing, Y-linked acts_upstream_of_or_within ISO (MGI:5305502|PMID:22192413) RGD PMID:22192413 MGI:5305502 NCBI chr  Y:942,838...1,105,313
Ensembl chr  Y:924,168...1,103,422
JBrowse link
heterochromatin assembly by small RNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fam172a family with sequence similarity 172, member A involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:7,553,873...8,018,183
Ensembl chr 2:7,553,891...8,018,162
JBrowse link
G Znfx1 zinc finger, NFX1-type containing 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:155,764,073...155,791,777
Ensembl chr 3:155,764,980...155,821,242
JBrowse link
heterochromatin organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hdac2 histone deacetylase 2 involved_in ISO (PMID:19372552) RGD PMID:19372552 NCBI chr20:40,548,250...40,571,609
Ensembl chr20:40,548,250...40,571,609
JBrowse link
G Hp1bp3 heterochromatin protein 1, binding protein 3 involved_in ISS
IBA
ISO
IEA
GO_REF:0000024
PMID:21873635
(PMID:24830416)
GO_REF:0000002
GO_REF:0000107
UniProt
RGD
InterPro
Ensembl
PMID:24830416 PMID:21873635 GO_REF:0000002 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr 5:150,435,781...150,463,004
Ensembl chr 5:150,433,740...150,463,000
JBrowse link
G LOC120093070 PHD finger protein 11-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:33,526,380...33,549,382
Ensembl chr15:33,453,952...33,606,470
JBrowse link
G LOC120093163 PHD finger protein 11-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:33,453,948...33,475,669
Ensembl chr15:33,453,952...33,606,470
JBrowse link
G Loxl2 lysyl oxidase-like 2 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:24239292)
UniProt
Ensembl
RGD
PMID:24239292 GO_REF:0000024 GO_REF:0000107 NCBI chr15:44,683,449...44,773,067
Ensembl chr15:44,683,880...44,773,067
JBrowse link
G Mecom MDS1 and EVI1 complex locus involved_in ISO (MGI:6274969|PMID:22939622) RGD PMID:22939622 MGI:6274969 NCBI chr 2:112,909,353...113,464,583
Ensembl chr 2:112,909,321...113,464,590
JBrowse link
G Mthfr methylenetetrahydrofolate reductase acts_upstream_of ISO (PMID:24769206) RGD PMID:24769206 NCBI chr 5:158,465,248...158,484,999
Ensembl chr 5:158,465,296...158,483,797
JBrowse link
G Prdm16 PR/SET domain 16 involved_in ISO (MGI:6274969|PMID:22939622) RGD PMID:22939622 MGI:6274969 NCBI chr 5:164,879,864...165,203,986
Ensembl chr 5:164,880,587...165,203,601
JBrowse link
G Setd7 SET domain containing 7, histone lysine methyltransferase acts_upstream_of_or_within
involved_in
ISO
IBA
(MGI:5471848|PMID:23509280)
PMID:21873635
(PMID:23509280)
RGD PMID:23509280 PMID:21873635 MGI:5471848, RGD:13792537 NCBI chr 2:135,562,683...135,605,468
Ensembl chr 2:135,562,683...135,605,468
JBrowse link
G Setdb1 SET domain bifurcated histone lysine methyltransferase 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:182,898,738...182,930,283
Ensembl chr 2:182,898,738...182,930,506
JBrowse link
G Setdb2 SET domain bifurcated histone lysine methyltransferase 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:33,553,657...33,606,586
Ensembl chr15:33,453,952...33,606,470
JBrowse link
G Snai1 snail family transcriptional repressor 1 involved_in ISO (MGI:5548026|PMID:24239292) RGD PMID:24239292 MGI:5548026 NCBI chr 3:156,248,479...156,252,969
Ensembl chr 3:156,248,485...156,252,969
JBrowse link
histone exchange term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anp32e acidic nuclear phosphoprotein 32 family member E involved_in ISO
IBA
(PMID:24463511)
PMID:21873635
RGD PMID:24463511 PMID:21873635 RGD:13792537 NCBI chr 2:183,472,600...183,489,057
Ensembl chr 2:183,472,609...183,489,054
JBrowse link
G Dmap1 DNA methyltransferase 1-associated protein 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:131,143,726...131,151,760
Ensembl chr 5:131,143,729...131,151,742