Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Nudt16 (nudix hydrolase 16) Rattus norvegicus
Analyze
Symbol: Nudt16
Name: nudix hydrolase 16
RGD ID: 1311387
Description: Predicted to have several functions, including metal ion binding activity; purine ribonucleoside triphosphate binding activity; and pyrophosphatase activity. Predicted to be involved in several processes, including RNA metabolic process; nucleobase-containing compound catabolic process; and positive regulation of double-strand break repair. Predicted to localize to cytoplasm; nucleolus; and nucleoplasm. Orthologous to human NUDT16 (nudix hydrolase 16); INTERACTS WITH (+)-schisandrin B; 2,3,7,8-tetrachlorodibenzodioxine; 2,6-dinitrotoluene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC363129; nudix (nucleoside diphosphate linked moiety X)-type motif 16; RGD1311387; similar to RIKEN cDNA 2310041H06; U8 snoRNA-decapping enzyme
Orthologs:
Homo sapiens (human) : NUDT16 (nudix hydrolase 16)  HGNC  Alliance
Mus musculus (house mouse) : Nudt16 (nudix (nucleoside diphosphate linked moiety X)-type motif 16)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Nudt16 (nudix hydrolase 16)
Pan paniscus (bonobo/pygmy chimpanzee) : NUDT16 (nudix hydrolase 16)
Canis lupus familiaris (dog) : NUDT16 (nudix hydrolase 16)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : LOC101965734 (U8 snoRNA-decapping enzyme)
Sus scrofa (pig) : NUDT16 (nudix hydrolase 16)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.08113,673,069 - 113,675,124 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl8113,672,758 - 113,675,128 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.08113,059,242 - 113,061,297 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.48110,199,789 - 110,201,844 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.18110,219,857 - 110,221,366 (-)NCBI
Celera8105,096,287 - 105,098,342 (-)NCBICelera
Cytogenetic Map8q32NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Nudt16
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1311387
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-11-24
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.