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Imported Disease Annotations - CTDTerm | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | microcephaly | | ISO | RGD:1602096 | 11554173 | CTD Direct Evidence: marker/mechanism | CTD | PMID:21983783 | |
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Imported Disease Annotations - CTDTerm | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | microcephaly | | ISO | RGD:1602096 | 11554173 | CTD Direct Evidence: marker/mechanism | CTD | PMID:21983783 | |
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# | Reference Title | Reference Citation |
1. | Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. | Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27. |
2. | OMIM Disease Annotation Pipeline | OMIM Disease Annotation Pipeline |
3. | GOA pipeline | RGD automated data pipeline |
4. | ClinVar Automated Import and Annotation Pipeline | RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations |
5. | Data Import for Chemical-Gene Interactions | RGD automated import pipeline for gene-chemical interactions |
6. | Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. | Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11. |
PMID:14654843 | PMID:21399614 | PMID:24240477 | PMID:26158450 | PMID:26297806 |
Cep63 (Rattus norvegicus - Norway rat) |
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CEP63 (Homo sapiens - human) |
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Cep63 (Mus musculus - house mouse) |
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Cep63 (Chinchilla lanigera - long-tailed chinchilla) |
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CEP63 (Pan paniscus - bonobo/pygmy chimpanzee) |
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CEP63 (Canis lupus familiaris - dog) |
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Cep63 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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CEP63 (Sus scrofa - pig) |
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CEP63 (Chlorocebus sabaeus - green monkey) |
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Cep63 (Heterocephalus glaber - naked mole-rat) |
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Variants in Cep63
115 total Variants ![]() |
The detailed report is available here: | ![]() | Full Report | ![]() | CSV | ![]() | TAB | ![]() | Printer |
miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/). For more information about miRGate, see PMID:25858286 or access the full paper here. |
The following QTLs overlap with this region. | ![]() | Full Report | ![]() | CSV | ![]() | TAB | ![]() | Printer | ![]() | Gviewer |
BF390936 |
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AI012039 |
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D9Mgc48e |
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alimentary part of gastrointestinal system | circulatory system | endocrine system | exocrine system | hemolymphoid system | hepatobiliary system | integumental system | musculoskeletal system | nervous system | renal system | reproductive system | respiratory system | appendage | |
High | |||||||||||||
Medium | 3 | 30 | 31 | 16 | 19 | 16 | 1 | 1 | 67 | 35 | 41 | 11 | 1 |
Low | 13 | 26 | 25 | 25 | 7 | 10 | 7 | 7 | |||||
Below cutoff |
RefSeq Transcripts | NM_001037772 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
NM_001244805 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
NR_045200 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_008766490 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_008766493 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_017595591 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_039081191 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_039081192 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_039081193 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_039081194 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_039081195 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_039081196 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_039081197 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_039081198 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_039081199 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_039081200 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_039081201 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_039081202 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_039081203 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XR_005487790 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
GenBank Nucleotide | BC083632 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
BC098948 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
BC161815 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
CH473954 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
JACYVU010000200 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
RefSeq Acc Id: | ENSRNOT00000031313 ⟹ ENSRNOP00000029550 | ||||||||||||
RefSeq Status: | |||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | ENSRNOT00000056531 ⟹ ENSRNOP00000053371 | ||||||||||||
RefSeq Status: | |||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | ENSRNOT00000084413 ⟹ ENSRNOP00000070249 | ||||||||||||
RefSeq Status: | |||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | ENSRNOT00000099786 ⟹ ENSRNOP00000083027 | ||||||||
RefSeq Status: | |||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENSRNOT00000114079 ⟹ ENSRNOP00000092635 | ||||||||
RefSeq Status: | |||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | NM_001037772 ⟹ NP_001032861 | ||||||||||||||||||||||||
RefSeq Status: | VALIDATED | ||||||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | NM_001244805 ⟹ NP_001231734 | ||||||||||||||||||||
RefSeq Status: | VALIDATED | ||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | NR_045200 | ||||||||||||||||||||
RefSeq Status: | VALIDATED | ||||||||||||||||||||
Type: | NON-CODING | ||||||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_017595591 ⟹ XP_017451080 | ||||||||||||
RefSeq Status: | |||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_039081191 ⟹ XP_038937119 | ||||||||
RefSeq Status: | |||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_039081192 ⟹ XP_038937120 | ||||||||
RefSeq Status: | |||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_039081193 ⟹ XP_038937121 | ||||||||
RefSeq Status: | |||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_039081194 ⟹ XP_038937122 | ||||||||
RefSeq Status: | |||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_039081195 ⟹ XP_038937123 | ||||||||
RefSeq Status: | |||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_039081196 ⟹ XP_038937124 | ||||||||
RefSeq Status: | |||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_039081197 ⟹ XP_038937125 | ||||||||
RefSeq Status: | |||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_039081198 ⟹ XP_038937126 | ||||||||
RefSeq Status: | |||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_039081199 ⟹ XP_038937127 | ||||||||
RefSeq Status: | |||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_039081200 ⟹ XP_038937128 | ||||||||
RefSeq Status: | |||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_039081201 ⟹ XP_038937129 | ||||||||
RefSeq Status: | |||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_039081202 ⟹ XP_038937130 | ||||||||
RefSeq Status: | |||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_039081203 ⟹ XP_038937131 | ||||||||
RefSeq Status: | |||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XR_005487790 | ||||||||
RefSeq Status: | |||||||||
Type: | NON-CODING | ||||||||
Position: |
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Protein RefSeqs | NP_001032861 | (Get FASTA) | NCBI Sequence Viewer |
NP_001231734 | (Get FASTA) | NCBI Sequence Viewer | |
XP_017451080 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038937119 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038937120 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038937121 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038937122 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038937123 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038937124 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038937125 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038937126 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038937127 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038937128 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038937129 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038937130 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038937131 | (Get FASTA) | NCBI Sequence Viewer | |
GenBank Protein | AAH98948 | (Get FASTA) | NCBI Sequence Viewer |
AAI61815 | (Get FASTA) | NCBI Sequence Viewer | |
EDL77401 | (Get FASTA) | NCBI Sequence Viewer | |
Q4KLY0 | (Get FASTA) | NCBI Sequence Viewer |
RefSeq Acc Id: | NP_001032861 ⟸ NM_001037772 |
- Peptide Label: | isoform 1 precursor |
- UniProtKB: | Q4KLY0 (UniProtKB/Swiss-Prot), A0A096MIU4 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | NP_001231734 ⟸ NM_001244805 |
- Peptide Label: | isoform 2 |
- UniProtKB: | Q4KLY0 (UniProtKB/Swiss-Prot) |
- Sequence: |
RefSeq Acc Id: | XP_017451080 ⟸ XM_017595591 |
- Peptide Label: | isoform X5 |
- Sequence: |
RefSeq Acc Id: | ENSRNOP00000029550 ⟸ ENSRNOT00000031313 |
RefSeq Acc Id: | ENSRNOP00000070249 ⟸ ENSRNOT00000084413 |
RefSeq Acc Id: | ENSRNOP00000053371 ⟸ ENSRNOT00000056531 |
RefSeq Acc Id: | XP_038937129 ⟸ XM_039081201 |
- Peptide Label: | isoform X8 |
RefSeq Acc Id: | XP_038937127 ⟸ XM_039081199 |
- Peptide Label: | isoform X6 |
RefSeq Acc Id: | XP_038937119 ⟸ XM_039081191 |
- Peptide Label: | isoform X1 |
- UniProtKB: | A0A0G2JXF3 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | XP_038937126 ⟸ XM_039081198 |
- Peptide Label: | isoform X5 |
RefSeq Acc Id: | XP_038937131 ⟸ XM_039081203 |
- Peptide Label: | isoform X10 |
RefSeq Acc Id: | XP_038937125 ⟸ XM_039081197 |
- Peptide Label: | isoform X4 |
RefSeq Acc Id: | XP_038937121 ⟸ XM_039081193 |
- Peptide Label: | isoform X1 |
- UniProtKB: | A0A0G2JXF3 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | XP_038937123 ⟸ XM_039081195 |
- Peptide Label: | isoform X3 |
RefSeq Acc Id: | XP_038937124 ⟸ XM_039081196 |
- Peptide Label: | isoform X3 |
RefSeq Acc Id: | XP_038937122 ⟸ XM_039081194 |
- Peptide Label: | isoform X2 |
RefSeq Acc Id: | XP_038937120 ⟸ XM_039081192 |
- Peptide Label: | isoform X1 |
- UniProtKB: | A0A0G2JXF3 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | XP_038937130 ⟸ XM_039081202 |
- Peptide Label: | isoform X9 |
- UniProtKB: | A0A8I5ZV14 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | XP_038937128 ⟸ XM_039081200 |
- Peptide Label: | isoform X7 |
RefSeq Acc Id: | ENSRNOP00000092635 ⟸ ENSRNOT00000114079 |
RefSeq Acc Id: | ENSRNOP00000083027 ⟸ ENSRNOT00000099786 |
Name | Modeler | Protein Id | AA Range | Protein Structure |
AF-Q4KLY0-F1-model_v2 | AlphaFold | Q4KLY0 | 1-538 | view protein structure |
eQTL | View at Phenogen | |
WGCNA | View at Phenogen | |
Tissue/Strain Expression | View at Phenogen |
RGD ID: | 13696225 | ||||||||
Promoter ID: | EPDNEW_R6749 | ||||||||
Type: | multiple initiation site | ||||||||
Name: | Cep63_1 | ||||||||
Description: | centrosomal protein 63 | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | ||||||||
Experiment Methods: | Single-end sequencing. | ||||||||
Position: |
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Database | Acc Id | Source(s) |
AGR Gene | RGD:1561183 | AgrOrtholog |
BioCyc Gene | G2FUF-29349 | BioCyc |
Ensembl Genes | ENSRNOG00000008410 | Ensembl, ENTREZGENE, UniProtKB/TrEMBL |
Ensembl Protein | ENSRNOP00000029550 | ENTREZGENE |
ENSRNOP00000029550.6 | UniProtKB/TrEMBL | |
ENSRNOP00000053371 | ENTREZGENE | |
ENSRNOP00000053371.3 | UniProtKB/TrEMBL | |
ENSRNOP00000070249 | ENTREZGENE | |
ENSRNOP00000070249.2 | UniProtKB/TrEMBL | |
ENSRNOP00000083027 | ENTREZGENE | |
ENSRNOP00000083027.1 | UniProtKB/TrEMBL | |
ENSRNOP00000092635 | ENTREZGENE | |
ENSRNOP00000092635.1 | UniProtKB/TrEMBL | |
Ensembl Transcript | ENSRNOT00000031313 | ENTREZGENE |
ENSRNOT00000031313.7 | UniProtKB/TrEMBL | |
ENSRNOT00000056531 | ENTREZGENE | |
ENSRNOT00000056531.5 | UniProtKB/TrEMBL | |
ENSRNOT00000084413 | ENTREZGENE | |
ENSRNOT00000084413.2 | UniProtKB/TrEMBL | |
ENSRNOT00000099786 | ENTREZGENE | |
ENSRNOT00000099786.1 | UniProtKB/TrEMBL | |
ENSRNOT00000114079 | ENTREZGENE | |
ENSRNOT00000114079.1 | UniProtKB/TrEMBL | |
IMAGE_CLONE | IMAGE:7134549 | IMAGE-MGC_LOAD |
IMAGE:9031816 | IMAGE-MGC_LOAD | |
InterPro | Cep63 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
Cep63/Deup1_N | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
KEGG Report | rno:300963 | UniProtKB/Swiss-Prot |
MGC_CLONE | MGC:187263 | IMAGE-MGC_LOAD |
MGC:94440 | IMAGE-MGC_LOAD | |
NCBI Gene | 300963 | ENTREZGENE |
PANTHER | PTHR18875:SF7 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
Pfam | CEP63 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
PhenoGen | Cep63 | PhenoGen |
UniProt | A0A096MIU4 | ENTREZGENE, UniProtKB/TrEMBL |
A0A0G2JXF3 | ENTREZGENE, UniProtKB/TrEMBL | |
A0A8I5ZV14 | ENTREZGENE, UniProtKB/TrEMBL | |
A0A8I6AVX5_RAT | UniProtKB/TrEMBL | |
A0A8L2UKK7_RAT | UniProtKB/TrEMBL | |
CEP63_RAT | UniProtKB/Swiss-Prot, ENTREZGENE |
Date | Current Symbol | Current Name | Previous Symbol | Previous Name | Description | Reference | Status |
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2010-04-20 | Cep63 | centrosomal protein 63kDa | LOC300963 | similar to centrosome protein Cep63 | Nomenclature updated to reflect human and mouse nomenclature | 1299863 | APPROVED |
2010-04-20 | Cep63 | centrosomal protein 63 | Cep63 | centrosomal protein 63kDa | Nomenclature updated to reflect human and mouse nomenclature | 1299863 | APPROVED |
2006-02-09 | LOC300963 | similar to centrosome protein Cep63 | Symbol and Name status set to provisional | 70820 | PROVISIONAL |