Gene: Ncapd3 (non-SMC condensin II complex, subunit D3) Rattus norvegicus
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Symbol: Ncapd3
Name: non-SMC condensin II complex, subunit D3
Description: Predicted to have chromatin binding activity and methylated histone binding activity. Predicted to be involved in meiotic chromosome condensation; meiotic chromosome separation; and mitotic chromosome condensation. Predicted to localize to the chromosome and nucleus. Human ortholog(s) of this gene implicated in primary autosomal recessive microcephaly. Orthologous to human NCAPD3 (non-SMC condensin II complex subunit D3); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; bisphenol A; fipronil.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: condensin-2 complex subunit D3; LOC315508; similar to mKIAA0056 protein
Orthologs:
Homo sapiens (human) : NCAPD3 (non-SMC condensin II complex subunit D3)  HGNC  Alliance
Mus musculus (house mouse) : Ncapd3 (non-SMC condensin II complex, subunit D3)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ncapd3 (non-SMC condensin II complex subunit D3)
Pan paniscus (bonobo/pygmy chimpanzee) : NCAPD3 (non-SMC condensin II complex subunit D3)
Canis lupus familiaris (dog) : NCAPD3 (non-SMC condensin II complex subunit D3)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ncapd3 (non-SMC condensin II complex subunit D3)
Sus scrofa (pig) : NCAPD3 (non-SMC condensin II complex subunit D3)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: suggests misassembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0828,075,629 - 28,145,024 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0828,095,360 - 28,164,189 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4826,631,707 - 26,695,041 (+)NCBIRGSC3.4rn4RGSC3.4
Celera826,924,962 - 26,993,734 (+)NCBICelera
Cytogenetic Map8q13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Ncapd3
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1562176
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.