Tex14 (testis expressed 14, intercellular bridge forming factor) - Rat Genome Database

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Gene: Tex14 (testis expressed 14, intercellular bridge forming factor) Rattus norvegicus
Analyze
Symbol: Tex14
Name: testis expressed 14, intercellular bridge forming factor
RGD ID: 1305437
Description: Predicted to enable protein kinase binding activity. Predicted to be involved in several processes, including intercellular bridge organization; mitotic spindle assembly checkpoint signaling; and nuclear chromosome segregation. Predicted to act upstream of or within cellular response to leukemia inhibitory factor and negative regulation of cytokinesis. Predicted to be located in cytoplasm. Predicted to be active in intercellular bridge; kinetochore; and midbody. Human ortholog(s) of this gene implicated in spermatogenic failure 23. Orthologous to human TEX14 (testis expressed 14, intercellular bridge forming factor); INTERACTS WITH 1,1,1-trichloro-2,2-bis(4-hydroxyphenyl)ethane; 3',5'-cyclic AMP; allethrin.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: inactive serine/threonine-protein kinase TEX14; LOC287603; testis expressed 14; testis expressed gene 14; testis-expressed protein 14; testis-expressed sequence 14
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81072,729,017 - 72,859,697 (+)NCBIGRCr8
mRatBN7.21072,231,766 - 72,356,938 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1072,231,801 - 72,355,805 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.01074,724,070 - 74,849,172 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1074,724,549 - 74,849,194 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01075,252,796 - 75,376,356 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41075,742,417 - 75,844,797 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11075,733,420 - 75,858,296 (+)NCBI
Celera1071,147,845 - 71,271,695 (+)NCBICelera
Cytogenetic Map10q26NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Tex14RatFanconi anemia complementation group O  ISOTEX14 (Homo sapiens)8554872ClinVar Annotator: match by term: Fanconi anemia complementation group OClinVarPMID:28492532
Tex14Rathereditary breast ovarian cancer syndrome  ISOTEX14 (Homo sapiens)8554872ClinVar Annotator: match by term: Breast-ovarian cancer more ...ClinVar 
Tex14Rathereditary breast ovarian cancer syndrome  ISOTEX14 (Homo sapiens)8554872ClinVar more ...ClinVarPMID:38922859
Tex14RatJoubert syndrome 1  ISOTEX14 (Homo sapiens)8554872ClinVar Annotator: match by term: Familial aplasia of the vermisClinVarPMID:28492532
Tex14Ratprostate cancer  ISOTEX14 (Homo sapiens)8554872ClinVar Annotator: match by term: Malignant tumor of prostateClinVarPMID:23265383
Tex14Ratspermatogenic failure 23  ISOTEX14 (Homo sapiens)8554872ClinVar more ...ClinVarPMID:25741868 more ...
Tex14Ratspermatogenic failure 3  ISOTEX14 (Homo sapiens)8554872ClinVar Annotator: match by term: Non-obstructive azoospermiaClinVarPMID:25741868 more ...
Tex14Ratspermatogenic failure 57  ISOTEX14 (Homo sapiens)8554872ClinVar Annotator: match by term: Male infertility with azoospermia or oligozoospermia due to single gene mutationClinVarPMID:25741868 and PMID:28492532
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Tex14Ratspermatogenic failure 23  ISOTEX14 (Homo sapiens)7240710 OMIM 

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Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Tex14Rat1,1,1-trichloro-2,2-bis(4-hydroxyphenyl)ethane multiple interactionsEXP 64804642 more ...CTDPMID:19414516
Tex14Rat2,3',4,4',5-Pentachlorobiphenyl increases expressionISOTex14 (Mus musculus)64804642 more ...CTDPMID:31388691
Tex14Rat3',5'-cyclic AMP multiple interactionsEXP 64804642 more ...CTDPMID:19414516
Tex14Ratacrylamide increases expressionISOTEX14 (Homo sapiens)6480464Acrylamide results in increased expression of TEX14 mRNACTDPMID:32763439
Tex14Rataflatoxin B1 decreases methylationISOTEX14 (Homo sapiens)6480464Aflatoxin B1 results in decreased methylation of TEX14 intronCTDPMID:30157460
Tex14Ratallethrin multiple interactionsEXP 6480464[cypermethrin co-treated with decamethrin co-treated with fenvalerate co-treated with cyhalothrin co-treated with Allethrins] results in decreased expression of TEX14 proteinCTDPMID:34896426
Tex14Rataristolochic acid A increases expressionISOTEX14 (Homo sapiens)6480464aristolochic acid I results in increased expression of TEX14 mRNACTDPMID:33212167
Tex14Ratarsane affects methylationISOTEX14 (Homo sapiens)6480464Arsenic affects the methylation of TEX14 geneCTDPMID:25304211
Tex14Ratarsenic atom affects methylationISOTEX14 (Homo sapiens)6480464Arsenic affects the methylation of TEX14 geneCTDPMID:25304211
Tex14Ratbenzo[a]pyrene increases methylationISOTEX14 (Homo sapiens)6480464Benzo(a)pyrene results in increased methylation of TEX14 3' UTRCTDPMID:27901495
Tex14Ratbenzo[a]pyrene affects methylationISOTEX14 (Homo sapiens)6480464Benzo(a)pyrene affects the methylation of TEX14 5' UTR more ...CTDPMID:27901495 and PMID:30157460
Tex14Ratbisphenol A decreases expressionEXP 6480464bisphenol A results in decreased expression of TEX14 mRNACTDPMID:25181051
Tex14Ratbisphenol A increases expressionISOTex14 (Mus musculus)6480464bisphenol A results in increased expression of TEX14 mRNACTDPMID:30951980
Tex14Ratcadmium dichloride decreases expressionISOTEX14 (Homo sapiens)6480464Cadmium Chloride results in decreased expression of TEX14 mRNACTDPMID:38382870
Tex14RatCGP 52608 multiple interactionsISOTEX14 (Homo sapiens)6480464CGP 52608 promotes the reaction [RORA protein binds to TEX14 gene]CTDPMID:28238834
Tex14Ratcyclosporin A decreases expressionEXP 6480464Cyclosporine results in decreased expression of TEX14 mRNACTDPMID:21865292
Tex14Ratcyhalothrin multiple interactionsEXP 6480464[cypermethrin co-treated with decamethrin co-treated with fenvalerate co-treated with cyhalothrin co-treated with Allethrins] results in decreased expression of TEX14 proteinCTDPMID:34896426
Tex14Ratcypermethrin multiple interactionsEXP 6480464[cypermethrin co-treated with decamethrin co-treated with fenvalerate co-treated with cyhalothrin co-treated with Allethrins] results in decreased expression of TEX14 proteinCTDPMID:34896426
Tex14Ratdorsomorphin multiple interactionsISOTEX14 (Homo sapiens)6480464[NOG protein co-treated with Valproic Acid co-treated with dorsomorphin co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in increased expression of TEX14 mRNACTDPMID:27188386
Tex14Ratfenvalerate multiple interactionsEXP 6480464[cypermethrin co-treated with decamethrin co-treated with fenvalerate co-treated with cyhalothrin co-treated with Allethrins] results in decreased expression of TEX14 proteinCTDPMID:34896426

1 to 20 of 39 rows

Biological Process
1 to 20 of 30 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Tex14Ratattachment of spindle microtubules to kinetochore involved_inISSUniProtKB:Q7M6U31600115GO_REF:0000024UniProtGO_REF:0000024
Tex14Ratattachment of spindle microtubules to kinetochore involved_inIBAMGI:1933227 and PANTHER:PTN0011286181600115GO_REF:0000033GO_CentralGO_REF:0000033
Tex14Ratattachment of spindle microtubules to kinetochore involved_inISOTex14 (Mus musculus)1624291 PMID:22405274RGDPMID:22405274
Tex14Ratattachment of spindle microtubules to kinetochore involved_inIEAUniProtKB:Q7M6U3 and ensembl:ENSMUSP000000544441600115GO_REF:0000107EnsemblGO_REF:0000107
Tex14Ratattachment of spindle microtubules to kinetochore involved_inIEAInterPro:IPR0393391600115GO_REF:0000002InterProGO_REF:0000002
Tex14Ratcell division involved_inIEAUniProtKB-KW:KW-01321600115GO_REF:0000043UniProtGO_REF:0000043
Tex14Ratcellular response to leukemia inhibitory factor acts_upstream_of_or_withinIEAUniProtKB:Q7M6U3 and ensembl:ENSMUSP000000544441600115GO_REF:0000107EnsemblGO_REF:0000107
Tex14Ratcellular response to leukemia inhibitory factor acts_upstream_of_or_withinISOTex14 (Mus musculus)1624291 PMID:20439489RGDPMID:20439489
Tex14Ratintercellular bridge organization involved_inIEAUniProtKB:Q7M6U3 and ensembl:ENSMUSP000000544441600115GO_REF:0000107EnsemblGO_REF:0000107
Tex14Ratintercellular bridge organization involved_inIBAMGI:1933227 and PANTHER:PTN0011286181600115GO_REF:0000033GO_CentralGO_REF:0000033
Tex14Ratintercellular bridge organization involved_inISOTex14 (Mus musculus)1624291 PMID:16549803RGDPMID:16549803
Tex14Ratintercellular bridge organization involved_inISSUniProtKB:Q7M6U31600115GO_REF:0000024UniProtGO_REF:0000024
Tex14Ratintercellular bridge organization involved_inIEAInterPro:IPR0393391600115GO_REF:0000002InterProGO_REF:0000002
Tex14Ratmale meiotic nuclear division involved_inIEAInterPro:IPR0393391600115GO_REF:0000002InterProGO_REF:0000002
Tex14Ratmale meiotic nuclear division involved_inIBAMGI:1933227 and PANTHER:PTN0011286181600115GO_REF:0000033GO_CentralGO_REF:0000033
Tex14Ratmale meiotic nuclear division involved_inISOTex14 (Mus musculus)1624291 PMID:16549803RGDPMID:16549803
Tex14Ratmale meiotic nuclear division involved_inIEAUniProtKB:Q7M6U3 and ensembl:ENSMUSP000000544441600115GO_REF:0000107EnsemblGO_REF:0000107
Tex14Ratmale meiotic nuclear division involved_inISSUniProtKB:Q7M6U31600115GO_REF:0000024UniProtGO_REF:0000024
Tex14Ratmitotic sister chromatid separation involved_inISOTex14 (Mus musculus)1624291 PMID:22405274RGDPMID:22405274
Tex14Ratmitotic sister chromatid separation involved_inIBAMGI:1933227 and PANTHER:PTN0011286181600115GO_REF:0000033GO_CentralGO_REF:0000033
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Cellular Component
1 to 18 of 18 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Tex14Ratchromosome located_inIEAUniProtKB-KW:KW-01581600115GO_REF:0000043UniProtGO_REF:0000043
Tex14Ratchromosome, centromeric region located_inIEAUniProtKB-KW:KW-01371600115GO_REF:0000043UniProtGO_REF:0000043
Tex14Ratcytoplasm located_inIEAUniProtKB-SubCell:SL-00861600115GO_REF:0000044UniProtGO_REF:0000044
Tex14Ratcytoplasm located_inIEAUniProtKB-KW:KW-09631600115GO_REF:0000043UniProtGO_REF:0000043
Tex14Ratintercellular bridge located_inISSUniProtKB:Q7M6U31600115GO_REF:0000024UniProtGO_REF:0000024
Tex14Ratintercellular bridge is_active_inIBAMGI:1933227 and PANTHER:PTN0011286181600115GO_REF:0000033GO_CentralGO_REF:0000033
Tex14Ratintercellular bridge located_inISOTex14 (Mus musculus)1624291 PMID:16549803 more ...RGDPMID:16549803 more ...
Tex14Ratintercellular bridge located_inIEAUniProtKB:Q7M6U3 and ensembl:ENSMUSP000000544441600115GO_REF:0000107EnsemblGO_REF:0000107
Tex14Ratkinetochore located_inISSUniProtKB:Q7M6U31600115GO_REF:0000024UniProtGO_REF:0000024
Tex14Ratkinetochore located_inIEAUniProtKB-KW:KW-09951600115GO_REF:0000043UniProtGO_REF:0000043
Tex14Ratkinetochore located_inISOTex14 (Mus musculus)1624291 PMID:22405274RGDPMID:22405274
Tex14Ratkinetochore is_active_inIBAMGI:1933227 and PANTHER:PTN0011286181600115GO_REF:0000033GO_CentralGO_REF:0000033
Tex14Ratkinetochore located_inIEAUniProtKB:Q7M6U3 and ensembl:ENSMUSP000000544441600115GO_REF:0000107EnsemblGO_REF:0000107
Tex14Ratmidbody located_inISSUniProtKB:Q7M6U31600115GO_REF:0000024UniProtGO_REF:0000024
Tex14Ratmidbody located_inIEAUniProtKB-SubCell:SL-04691600115GO_REF:0000044UniProtGO_REF:0000044
Tex14Ratmidbody is_active_inIBAMGI:1933227 and PANTHER:PTN0011286181600115GO_REF:0000033GO_CentralGO_REF:0000033
Tex14Ratmidbody located_inISOTex14 (Mus musculus)1624291 PMID:22405274RGDPMID:22405274
Tex14Ratmidbody located_inIEAUniProtKB:Q7M6U3 and ensembl:ENSMUSP000000544441600115GO_REF:0000107EnsemblGO_REF:0000107
1 to 18 of 18 rows

Molecular Function

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Tex14RatATP binding enablesIEAUniProtKB-KW:KW-00671600115GO_REF:0000043UniProtGO_REF:0000043
Tex14RatATP binding enablesIEAInterPro:IPR0007191600115GO_REF:0000002InterProGO_REF:0000002
Tex14Ratnucleotide binding enablesIEAUniProtKB-KW:KW-05471600115GO_REF:0000043UniProtGO_REF:0000043
Tex14Ratprotein binding enablesISOTEX14 (Homo sapiens)1624291UniProtKB:P61968 more ...RGDPMID:20176808 more ...
Tex14Ratprotein binding enablesISOTex14 (Mus musculus)1624291PR:Q8BT07 more ...RGDPMID:20176808 and PMID:21364893
Tex14Ratprotein kinase activity enablesIEAInterPro:IPR000719 and InterPro:IPR0012451600115GO_REF:0000002InterProGO_REF:0000002
Tex14Ratprotein kinase binding enablesIEAUniProtKB:Q8IWB6 and ensembl:ENSP000002689101600115GO_REF:0000107EnsemblGO_REF:0000107
Tex14Ratprotein kinase binding enablesISOTEX14 (Homo sapiens)1624291UniProtKB:P11440 more ...RGDPMID:22405274


#
Reference Title
Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
3. GOA pipeline RGD automated data pipeline
4. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
PMID:16549803   PMID:17383626   PMID:18570454   PMID:20176808   PMID:20439489   PMID:22405274  



Tex14
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81072,729,017 - 72,859,697 (+)NCBIGRCr8
mRatBN7.21072,231,766 - 72,356,938 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1072,231,801 - 72,355,805 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.01074,724,070 - 74,849,172 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1074,724,549 - 74,849,194 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01075,252,796 - 75,376,356 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41075,742,417 - 75,844,797 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11075,733,420 - 75,858,296 (+)NCBI
Celera1071,147,845 - 71,271,695 (+)NCBICelera
Cytogenetic Map10q26NCBI
TEX14
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381758,556,678 - 58,692,045 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1758,556,678 - 58,692,055 (-)EnsemblGRCh38hg38GRCh38
GRCh371756,634,039 - 56,769,406 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361753,989,038 - 54,124,415 (-)NCBINCBI36Build 36hg18NCBI36
Build 341753,989,037 - 54,124,415NCBI
Celera1753,095,837 - 53,231,170 (-)NCBICelera
Cytogenetic Map17q22NCBI
HuRef1751,994,365 - 52,129,914 (-)NCBIHuRef
CHM1_11756,699,606 - 56,834,952 (-)NCBICHM1_1
T2T-CHM13v2.01759,424,548 - 59,559,911 (-)NCBIT2T-CHM13v2.0
Tex14
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391187,295,839 - 87,446,649 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1187,295,891 - 87,446,649 (+)EnsemblGRCm39 Ensembl
GRCm381187,405,013 - 87,555,823 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1187,405,065 - 87,555,823 (+)EnsemblGRCm38mm10GRCm38
MGSCv371187,218,567 - 87,369,325 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361187,302,481 - 87,372,018 (+)NCBIMGSCv36mm8
Celera1197,006,951 - 97,151,190 (+)NCBICelera
Cytogenetic Map11CNCBI
cM Map1152.09NCBI
Tex14
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554514,179,591 - 4,297,024 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554514,206,114 - 4,296,969 (+)NCBIChiLan1.0ChiLan1.0
TEX14
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21974,723,015 - 74,864,651 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11779,534,320 - 79,676,102 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01752,627,335 - 52,768,926 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11757,480,369 - 57,621,055 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1757,480,369 - 57,621,055 (-)Ensemblpanpan1.1panPan2
TEX14
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1933,174,813 - 33,289,202 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl933,174,814 - 33,262,870 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha932,409,879 - 32,524,007 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0933,980,808 - 34,095,017 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl933,980,809 - 34,073,034 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1932,767,400 - 32,881,529 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0933,050,771 - 33,170,581 (-)NCBIUNSW_CanFamBas_1.0
Tex14
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560232,498,044 - 32,579,318 (-)NCBIHiC_Itri_2
SpeTri2.0NW_0049364904,499,825 - 4,576,952 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TEX14
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1234,815,476 - 34,912,766 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11234,815,472 - 34,975,901 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21235,794,845 - 35,938,597 (+)NCBISscrofa10.2Sscrofa10.2susScr3
TEX14
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11634,709,039 - 34,849,855 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1634,746,004 - 34,849,781 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660775,560,101 - 5,662,893 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0

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Variants in Tex14
578 total Variants

Predicted Target Of
Summary Value
Count of predictions:40
Count of miRNA genes:39
Interacting mature miRNAs:40
Transcripts:ENSRNOT00000009077
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 90 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1549846Scl47Serum cholesterol level QTL 473.6blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)105057470795574707Rat
1578779Tcas10Tongue tumor susceptibility QTL 103.12tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)103129743976297439Rat
631565Hcuc4Hepatic copper content QTL 44.15liver copper amount (VT:0003065)liver copper weight to liver dry weight ratio (CMO:0001512)106694181373452992Rat
1298069Bp168Blood pressure QTL 1685.5blood pressure trait (VT:0000183)systolic blood pressure (CMO:0000004)102652195798003205Rat
2293669Bmd33Bone mineral density QTL 334.50.0001femur strength trait (VT:0010010)femoral neck polar moment of inertia (CMO:0001670)104944455181709989Rat
152025224Bw193Body weight QTL 1936.47body mass (VT:0001259)105166340575085664Rat
631552Vetf2Vascular elastic tissue fragility QTL 24.50.0002aorta elastic tissue integrity trait (VT:0010556)artery internal elastic lamina non-tumorous lesion count (CMO:0001913)104114263386142633Rat
61449Ciaa2CIA Autoantibody QTL 27.1blood autoantibody amount (VT:0003725)calculated serum anti-type 2 collagen antibody titer (CMO:0001279)1063221094107211142Rat
12903245Cm110Cardiac mass QTL 1100.001heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)107111521772606468Rat
12903246Cm111Cardiac mass QTL 1110.001heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)107111521772606468Rat

1 to 10 of 90 rows
D11Mit323  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21072,327,217 - 72,327,317 (+)MAPPERmRatBN7.2
Rnor_6.01074,820,289 - 74,820,388NCBIRnor6.0
Rnor_5.01075,280,513 - 75,280,612UniSTSRnor5.0
RGSC_v3.41075,814,397 - 75,814,496UniSTSRGSC3.4
Celera1071,243,226 - 71,243,325UniSTS
Cytogenetic Map10q26UniSTS
Rnu1a1  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21072,245,915 - 72,246,146 (+)MAPPERmRatBN7.2
Rnor_6.01074,738,660 - 74,738,890NCBIRnor6.0
Rnor_5.01075,362,011 - 75,362,241UniSTSRnor5.0
RGSC_v3.41075,733,084 - 75,733,314UniSTSRGSC3.4
Celera1071,162,156 - 71,162,386UniSTS
Cytogenetic Map10q26UniSTS
C85585  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21072,355,468 - 72,355,551 (+)MAPPERmRatBN7.2
Rnor_6.01074,848,833 - 74,848,915NCBIRnor6.0
Rnor_5.01075,253,053 - 75,253,135UniSTSRnor5.0
RGSC_v3.41075,844,458 - 75,844,540UniSTSRGSC3.4
Celera1071,271,356 - 71,271,438UniSTS
Cytogenetic Map10q26UniSTS




alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
8 10 45 113 89 87 57 25 57 6 210 92 93 45 60 30


1 to 27 of 27 rows
RefSeq Transcripts NM_001419556 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006220767 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006220769 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006220770 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008768160 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008768161 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008768162 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008768163 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008768164 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008775218 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008775220 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017597679 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017604104 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039087362 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039087363 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039087364 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039087365 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039087366 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039087367 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039087368 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039087369 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039087370 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039087371 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039087373 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063268693 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063268694 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAXUCZ010000010 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
1 to 27 of 27 rows

Ensembl Acc Id: ENSRNOT00000009077   ⟹   ENSRNOP00000009077
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1072,231,801 - 72,355,805 (+)Ensembl
Rnor_6.0 Ensembl1074,724,549 - 74,849,194 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000116997   ⟹   ENSRNOP00000090596
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1072,231,801 - 72,355,805 (+)Ensembl
RefSeq Acc Id: NM_001419556   ⟹   NP_001406485
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81072,729,055 - 72,853,060 (+)NCBI
mRatBN7.21072,231,792 - 72,355,803 (+)NCBI
RefSeq Acc Id: XM_039087362   ⟹   XP_038943290
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81072,729,017 - 72,859,697 (+)NCBI
mRatBN7.21072,231,766 - 72,356,938 (+)NCBI
RefSeq Acc Id: XM_039087363   ⟹   XP_038943291
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81072,746,456 - 72,859,697 (+)NCBI
mRatBN7.21072,249,209 - 72,356,938 (+)NCBI
RefSeq Acc Id: XM_039087364   ⟹   XP_038943292
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81072,729,017 - 72,859,697 (+)NCBI
mRatBN7.21072,231,766 - 72,356,938 (+)NCBI
RefSeq Acc Id: XM_039087365   ⟹   XP_038943293
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81072,729,017 - 72,859,697 (+)NCBI
mRatBN7.21072,231,766 - 72,356,938 (+)NCBI
RefSeq Acc Id: XM_039087366   ⟹   XP_038943294
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81072,729,017 - 72,859,697 (+)NCBI
mRatBN7.21072,231,766 - 72,356,938 (+)NCBI
RefSeq Acc Id: XM_039087367   ⟹   XP_038943295
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81072,783,681 - 72,859,697 (+)NCBI
mRatBN7.21072,286,475 - 72,356,938 (+)NCBI
RefSeq Acc Id: XM_039087368   ⟹   XP_038943296
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81072,778,002 - 72,859,697 (+)NCBI
mRatBN7.21072,282,815 - 72,356,938 (+)NCBI
RefSeq Acc Id: XM_039087369   ⟹   XP_038943297
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81072,729,017 - 72,859,697 (+)NCBI
mRatBN7.21072,231,766 - 72,356,938 (+)NCBI
RefSeq Acc Id: XM_039087370   ⟹   XP_038943298
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81072,729,017 - 72,847,823 (+)NCBI
mRatBN7.21072,231,766 - 72,346,577 (+)NCBI
RefSeq Acc Id: XM_039087371   ⟹   XP_038943299
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81072,729,017 - 72,847,823 (+)NCBI
mRatBN7.21072,231,766 - 72,346,576 (+)NCBI
RefSeq Acc Id: XM_039087373   ⟹   XP_038943301
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81072,729,017 - 72,836,100 (+)NCBI
mRatBN7.21072,231,766 - 72,338,862 (+)NCBI
RefSeq Acc Id: XM_063268693   ⟹   XP_063124763
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81072,729,017 - 72,859,697 (+)NCBI
RefSeq Acc Id: XM_063268694   ⟹   XP_063124764
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81072,729,017 - 72,847,823 (+)NCBI
1 to 5 of 16 rows
1 to 5 of 16 rows
Ensembl Acc Id: ENSRNOP00000009077   ⟸   ENSRNOT00000009077
RefSeq Acc Id: XP_038943290   ⟸   XM_039087362
- Peptide Label: isoform X1
- UniProtKB: F1M5M3 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_038943294   ⟸   XM_039087366
- Peptide Label: isoform X5
- UniProtKB: F1M5M3 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_038943293   ⟸   XM_039087365
- Peptide Label: isoform X3
- UniProtKB: F1M5M3 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_038943297   ⟸   XM_039087369
- Peptide Label: isoform X8
- UniProtKB: F1M5M3 (UniProtKB/Swiss-Prot)
Protein kinase


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

RGD ID:13697574
Promoter ID:EPDNEW_R8097
Type:single initiation site
Name:Tex14_1
Description:testis expressed 14, intercellular bridge forming factor
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01074,724,589 - 74,724,649EPDNEW


1 to 29 of 29 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-23766 BioCyc
Ensembl Genes ENSRNOG00000023698 Ensembl, ENTREZGENE
Ensembl Transcript ENSRNOT00000009077 ENTREZGENE
  ENSRNOT00000116997 ENTREZGENE
Gene3D-CATH 1.25.40.20 UniProtKB/Swiss-Prot
  Transferase(Phosphotransferase) domain 1 UniProtKB/Swiss-Prot
InterPro Ankyrin_rpt UniProtKB/Swiss-Prot
  Ankyrin_rpt-contain_sf UniProtKB/Swiss-Prot
  Kinase-like_dom_sf UniProtKB/Swiss-Prot
  Prot_kinase_dom UniProtKB/Swiss-Prot
  Ser-Thr/Tyr_kinase_cat_dom UniProtKB/Swiss-Prot
  Tex14 UniProtKB/Swiss-Prot
NCBI Gene 287603 ENTREZGENE
PANTHER INACTIVE SERINE/THREONINE-PROTEIN KINASE TEX14 UniProtKB/Swiss-Prot
  PTHR23060 UniProtKB/Swiss-Prot
Pfam Ank_2 UniProtKB/Swiss-Prot
  Pkinase_Tyr UniProtKB/Swiss-Prot
PhenoGen Tex14 PhenoGen
PROSITE ANK_REP_REGION UniProtKB/Swiss-Prot
  ANK_REPEAT UniProtKB/Swiss-Prot
  PROTEIN_KINASE_DOM UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000023698 RatGTEx
SMART ANK UniProtKB/Swiss-Prot
Superfamily-SCOP SSF48403 UniProtKB/Swiss-Prot
  SSF56112 UniProtKB/Swiss-Prot
UniProt A0A8I6ANJ7 ENTREZGENE, UniProtKB/TrEMBL
  F1M5M3 ENTREZGENE
  J3KTR9 ENTREZGENE, UniProtKB/TrEMBL
  TEX14_RAT UniProtKB/Swiss-Prot
1 to 29 of 29 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-05-11 Tex14  testis expressed 14, intercellular bridge forming factor  Tex14  testis expressed 14  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-09-24 Tex14  testis expressed 14  Tex14  testis expressed gene 14   Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 Tex14  testis expressed gene 14   Tex14_predicted  testis expressed gene 14 (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-12 Tex14_predicted  testis expressed gene 14 (predicted)      Symbol and Name status set to approved 70820 APPROVED