Hcuc4 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Hcuc4 (Hepatic copper content QTL 4) Rattus norvegicus

Symbol: Hcuc4
Name: Hepatic copper content QTL 4
RGD ID: 631565
Trait: liver copper amount   (VT:0003065)    
Measurement Type: liver copper weight to liver dry weight ratio   (CMO:0001512)    
LOD Score: 4.15
P Value: Not Available
Variance: Not Available
Inheritance Type: recessive
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr81067,439,473 - 73,950,209RGD_MAPPER_PIPELINE
mRatBN7.21066,941,813 - 73,452,992RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01069,348,459 - 75,983,662RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01068,983,854 - 74,127,825RGDRnor5.0
RGSC_v3.41070,191,595 - 77,091,834RGDRGSC3.4
RGSC_v3.11070,205,218 - 77,106,262RGD
Cross Type: Not Available
Strains Crossed: BC/CpbU LEW/OlaHsd 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Candidate Gene Status
Atox1 is a candidate Gene for Hcuc4

Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain
BC/CpbU  (IEA)
LEW/OlaHsd  (IEA)

References

References - curated
# Reference Title Reference Citation
1. Quantitative trait loci influencing hepatic copper in rats. de Wolf ID, etal., Exp Biol Med (Maywood) 2002 Jul;227(7):529-34.
Related QTLs

Related QTL Description Reference
Hcuc1 maps to same region RGD:629572


Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
11435226LOC108352208uncharacterized LOC108352208106743811867454058Rat
402237550LOC134480836uncharacterized LOC134480836106746320667464521Rat
3645Ccl2C-C motif chemokine ligand 2106750307767504875Rat
1359152Ccl7C-C motif chemokine ligand 7106751409567515945Rat
3644Ccl11C-C motif chemokine ligand 11106752597567530576Rat
1309255Ccl12C-C motif chemokine ligand 12106756787667569426Rat
402154735LOC134480706uncharacterized LOC134480706106762433067630667Rat
1586495Ccl1C-C motif chemokine ligand 1106762596267628740Rat
402084473LOC134480707uncharacterized LOC134480707106775730967780141Rat
1565522Tmem132etransmembrane protein 132E106782847567884398Rat
41176308LOC120095155uncharacterized LOC120095155106800577668120352Rat
402219966LOC134480923U4 spliceosomal RNA106814135768141435Rat
1359453Cct6bchaperonin containing TCP1 subunit 6B106815011168198932Rat
11472642LOC108352113transcription factor BTF3 homolog 4 pseudogene106815405168167583Rat
1562573Zfp830zinc finger protein 830106819890368200367Rat
7607868LOC102547954uncharacterized LOC102547954106821416668215109Rat
1309875Lig3DNA ligase 3106821537168238705Rat
727916Rfflring finger and FYVE-like domain containing E3 ubiquitin protein ligase106823827368301225Rat
1306944Rad51dRAD51 paralog D106830335068322002Rat
1310708Fndc8fibronectin type III domain containing 8106832350068331638Rat
41195735LOC120095352U6 spliceosomal RNA106832478968324901Rat
1308301Nle1notchless homolog 1106833160968342562Rat
1305666Unc45bunc-45 myosin chaperone B106834301168370683Rat
1312025Slfn5schlafen family member 5106837844068392515Rat
402153607LOC134480838glyceraldehyde-3-phosphate dehydrogenase-like106839408168420502Rat
1359139Slfn9schlafen family member 9106840664168420062Rat
402124721LOC134480837large ribosomal subunit protein uL18-like106841121968420502Rat
11366402LOC108352183spindle and kinetochore-associated protein 2 pseudogene106843032668448304Rat
1308645Slfn2schlafen family member 2106845086168457198Rat
1583007Slfn1schlafen family member 1106847499568480822Rat
620455Slfn4schlafen family member 4106849213568515674Rat
1582982Gsta4l1glutathione S-transferase, alpha 4 like 1106850483068505452Rat
1564411Slfn3schlafen 3106851581568557674Rat
7614463Slfn4l1schlafen family member 4 like 1106856217168565596Rat
41116338LOC120095481U2 spliceosomal RNA106857003768570227Rat
1561538Slfn14schlafen family member 14106857385868585331Rat
11414676LOC10835342540S ribosomal protein S27-like106858722668587558Rat
40983522Snord7small nucleolar RNA, C/D box 7106859254668592641Rat
620757Pex12peroxisomal biogenesis factor 12106859330768596938Rat
71048Ap2b1adaptor related protein complex 2 subunit beta 1106859692568702547Rat
41280740LOC120095451small nucleolar RNA SNORA17106866232868662457Rat
1310873Rasl10bRAS-like, family 10, member B106870731568719642Rat
1307868Gas2l2growth arrest-specific 2 like 2106871999968727549Rat
1597447C10h17orf50similar to human chromosome 17 open reading frame 50106873637368739950Rat
1311573Mmp28matrix metallopeptidase 28106873865168762377Rat
41041079LOC120095158uncharacterized LOC120095158106874376868750247Rat
1309595Taf15TATA-box binding protein associated factor 15106877040868802458Rat
1559875Heatr9HEAT repeat containing 9106880663468816815Rat
69069Ccl5C-C motif chemokine ligand 5106882033068824906Rat
1310563Ccl9C-C motif chemokine ligand 9106886399468868928Rat
9290621LOC103693406uncharacterized LOC103693406106887064968949148Rat
41203172Rpl30-ps12ribosomal protein L30, pseudogene 12106887511368876338Rat
1303200Ccl6C-C motif chemokine ligand 6106887769268883366Rat
3647Ccl3C-C motif chemokine ligand 3106894888968950439Rat
620441Ccl4C-C motif chemokine ligand 4106896389368965728Rat
41059947LOC120095331uncharacterized LOC120095331106897854168980873Rat
6502228Wfdc18l1WAP four-disulfide core domain 18 like 1106903654069038674Rat
41388070LOC120095161uncharacterized LOC120095161106904058969045154Rat
2318138Wfdc17WAP four-disulfide core domain 17106905945169060298Rat
619957Wfdc18WAP four-disulfide core domain 18106908631969088473Rat
2318090Anos1-ps1anosmin 1, pseudogene 1106909133869092210Rat
1303147Wfdc21WAP four-disulfide core domain 21106912533669131205Rat
1566204Heatr6HEAT repeat containing 6106913253269161334Rat
3830Hnf1bHNF1 homeobox B106923337769287360Rat
402241616LOC134480708uncharacterized LOC134480708106926126469265173Rat
621743Ddx52DExD-box helicase 52106932206269344856Rat
620684Synrgsynergin, gamma106934615469428714Rat
402211580LOC134480841uncharacterized LOC134480841106934843669351550Rat
402011428LOC134480839uncharacterized LOC134480839106941052169425584Rat
1307415Dusp14dual specificity phosphatase 14106943394969463863Rat
7632735Rps15a-ps2ribosomal protein S15a, pseudogene 2106944951769449977Rat
1309959Tada2atranscriptional adaptor 2A106946396669511612Rat
621248Acacaacetyl-CoA carboxylase alpha106951162769773888Rat
7517962C10h17orf78similar to human chromosome 17 open reading frame 78106953770169552358Rat
41117163Rpl17-ps8ribosomal protein L17, pseudogene 8106955399869554515Rat
402390324LOC134480840uncharacterized LOC134480840106957646269587316Rat
620685Aatfapoptosis antagonizing transcription factor106979650269889671Rat
71074Lhx1LIM homeobox 1106989428869901076Rat
7595653LOC102553190uncharacterized LOC102553190106990196969912138Rat
402102542LOC134480634uncharacterized LOC134480634107000723970015093Rat
1566232Mrm1mitochondrial rRNA methyltransferase 1107018784270194785Rat
1307935Dhrs11dehydrogenase/reductase 11107019563770205735Rat
7518044Ube2i-ps4ubiquitin-conjugating enzyme E2I, pseudogene 4107019936870200062Rat
1302978Ggnbp2gametogenetin binding protein 2107020895070240554Rat
1598226Znhit3zinc finger, HIT-type containing 3107024674970287927Rat
727962Pigwphosphatidylinositol glycan anchor biosynthesis, class W107024690470248412Rat
1559961Myo19myosin XIX107025050070279867Rat
40973139LOC120095499U6 spliceosomal RNA107029589570296001Rat
2324311Cox7b-ps4cytochrome c oxidase subunit 7B, pseudogene 4107030022670300605Rat
2242Car4carbonic anhydrase 4107032510270333916Rat
1592359Rpl37a-ps3ribosomal protein L37A, pseudogene 3107033571970336081Rat
1306657Usp32ubiquitin specific peptidase 32107035331070538008Rat
41358241Dab1-ps1DAB adaptor protein 1, pseudogene 1107042619070432313Rat
1310166Chct1CHD1 helical C-terminal domain containing 1107053720670548972Rat
1306488Appbp2amyloid beta precursor protein binding protein 2107055521270597267Rat
402215052LOC134480842tetra-peptide repeat homeobox-like protein107058608570596848Rat
402196484LOC134480843large ribosomal subunit protein eL21-like107060816971676378Rat
1305460Ppm1dprotein phosphatase, Mg2+/Mn2+ dependent, 1D107067002670706030Rat
1560788Bcas3BCAS3, microtubule associated cell migration factor107071108471170492Rat
402297761LOC134480844uncharacterized LOC134480844107105129471103730Rat
1311014Tbx2T-box transcription factor 2107117708271186275Rat
1309057Tbx4T-box transcription factor 4107122814571258222Rat
1307659Brip1BRCA1 interacting DNA helicase 1107140203571528083Rat
40971346Trnav-aac22transfer RNA valine (anticodon AAC) 22107145388771453959Rat
1305547Ints2integrator complex subunit 2107152902171576529Rat
1304829Med13mediator complex subunit 13107158435471674614Rat
41033403LOC120095332uncharacterized LOC120095332107174493771747521Rat
41293538LOC120095364U6 spliceosomal RNA107176001871760122Rat
1562411Rnft1ring finger protein, transmembrane 1107180740371821132Rat
620683Rps6kb1ribosomal protein S6 kinase B1107181779471865211Rat
1311967Tubd1tubulin, delta 1107186544671888731Rat
2325598Mir21microRNA 21107190260071902691Rat
70367Vmp1vacuole membrane protein 1107190322372002337Rat
1306819Ptrh2peptidyl-tRNA hydrolase 2107200245072012606Rat
2364Cltcclathrin heavy chain107201498472073308Rat
1359618Dhx40DEAH-box helicase 40107208186772118792Rat
41062475LOC120095163uncharacterized LOC120095163107215425272156442Rat
9226275LOC103693408uncharacterized LOC103693408107215688972160494Rat
41089124LOC120095164uncharacterized LOC120095164107218138072219182Rat
402156134LOC134480733uncharacterized histidine-rich protein DDB_G0274557-like107222712072237574Rat
1311564Ypel2yippee-like 2107224359172301124Rat
1311813Gdpd1glycerophosphodiester phosphodiesterase domain containing 1107231871672381143Rat
7748685Ifitm1-ps1interferon induced transmembrane protein 1, pseudogene 1107234980372351721Rat
41161246LOC120095167uncharacterized LOC120095167107238137772389557Rat
1306862Smg8SMG8 nonsense mediated mRNA decay factor107238401272393746Rat
1561541Prr11proline rich 11107239612772440643Rat
1307084Ska2spindle and kinetochore associated complex subunit 2107241870772436721Rat
2325405Mir301amicroRNA 301a107242259972422698Rat
1308349Trim37tripartite motif-containing 37107244067272572831Rat
735028Ppm1eprotein phosphatase, Mg2+/Mn2+ dependent, 1E107254890672684702Rat
402042529LOC134480846uncharacterized LOC134480846107260719472612508Rat
41130763Gapdh-ps42Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 42107262644572628847Rat
41154135LOC120095391small nucleolar RNA SNORA70107263149172631612Rat
41243160LOC120095359U6 spliceosomal RNA107264519772645303Rat
402306416LOC134480845uncharacterized LOC134480845107268478172687086Rat
1563765Rad51cRAD51 paralog C107270229972728980Rat
1305437Tex14testis expressed 14, intercellular bridge forming factor107272901772859697Rat
11451344Trnan-guu9transfer RNA asparagine (anticodon GUU) 9107274023372740306Rat
402010437LOC134480851uncharacterized LOC134480851107274146372742463Rat
41186195LOC120095396U1 spliceosomal RNA107274338872743551Rat
402040514LOC134480849uncharacterized LOC134480849107274581972746346Rat
41035616LOC120095385U1 spliceosomal RNA107274713472747297Rat
402146456LOC134480850uncharacterized LOC134480850107275540972762008Rat
40980517LOC120095490small nucleolar RNA U3107276229972762513Rat
41280008LOC120095496U4 spliceosomal RNA107276853472768650Rat
41210266LOC120095489small nucleolar RNA U3107276980072770014Rat
41396155LOC120095168zinc finger protein OZF-like107277191572775278Rat
41390802LOC120095491small nucleolar RNA U3107278237272782586Rat
402087889LOC134480848uncharacterized LOC134480848107284082672863876Rat
1308781Septin4septin 4107286396972888018Rat
1310306Mtmr4myotubularin related protein 4107289066572913598Rat
1592448Hsf5heat shock transcription factor 5107291373072957649Rat
1305204Rnf43ring finger protein 43107295874473034540Rat
41020299LOC120095369U6 spliceosomal RNA107299372172993824Rat
1306372Supt4h1SPT4 homolog, DSIF elongation factor subunit107303656073042821Rat
402047133LOC134480847uncharacterized LOC134480847107304114373045346Rat
708563Tspoap1TSPO associated protein 1107305341473083640Rat
2325567Mir142microRNA 142107305510473055190Rat
1592081Mpomyeloperoxidase107309212473102057Rat
1310051Lpolactoperoxidase107310417073124683Rat
1565186Mks1MKS transition zone complex subunit 1107315259973167451Rat
1311882Epxeosinophil peroxidase107316409673175180Rat
1333783Or4d2bolfactory receptor family 4 subfamily D member 2B107319024273191177Rat
1332601Or4d2olfactory receptor family 4 subfamily D member 2107319434373195278Rat
1333064Olr1523olfactory receptor 1523107320549873206439Rat
619860Dynll2dynein light chain LC8-type 2107326426073283042Rat
41042236LOC120095169uncharacterized LOC120095169107327598673286057Rat
1587490Srsf1serine and arginine rich splicing factor 1107333551973342549Rat
1308058Vezf1vascular endothelial zinc finger 1107334166673373320Rat
1304861Cuedc1CUE domain containing 1107338979873484914Rat
1586365Rpl27a-ps10ribosomal protein L27a, pseudogene 10107342588373426929Rat
1306963Mrps23mitochondrial ribosomal protein S23107349441773503996Rat
1586338Ccdc182coiled-coil domain containing 182107358741673588228Rat
7613436LOC102557529uncharacterized LOC102557529107359958873610150Rat
1560397Msi2musashi RNA-binding protein 2107364096074007497Rat
402236933LOC134480852uncharacterized LOC134480852107365044073667716Rat
402002815LOC134480853uncharacterized LOC134480853107390308673905136Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
36203D10Rat27144107395020973950353Ratregion
36319D10Rat26159107369533973695498Ratregion
36916D10Rat58162106828256968282731Ratregion
36751D10Rat25119107357183873571957Ratregion
34900D10Rat57123107148001071480133Ratregion
39908D10Rat194243107271656172716804Ratregion
38372D10Rat152213107224438472244597Ratregion
40444D10Rat220126106938373569383861Ratregion
38504D10Rat90251106989682269897073Ratregion
38936D10Rat98227106743924667439473Ratregion
39114D10Rat87199107304945773049656Ratregion
41298D10Rat153164107360044673600610Ratregion
41330D10Rat154139107331244373312582Ratregion
41468D10Rat155173106747660867476781Ratregion
42371D10Rat263149106811422368114372Ratregion
66412D10Mco43117106869139468691511Ratregion
66493D10Mco63204107017234270172546Ratregion
1578832D10Chm42165107295346372953628Ratregion
1578844D10Chm222199107347329373473492Ratregion
1578849D10Chm37179107363625073636429Ratregion
1578871D10Chm141245107118745671187701Ratregion
1578918D10Chm167245106783307767833322Ratregion
1578942D10Chm5239107252823072528469Ratregion
1579006D10Chm71225107242009472420319Ratregion
1579034D10Chm78237107365478873655025Ratregion
1579054D10Chm40171107342727473427445Ratregion
1579148D10Chm183189106858121068581399Ratregion
1629325D10Got226151107143240371432554Ratregion
1642089D10Mco87301106861091268611213Ratregion
1639949D10Got410186106912862369128809Ratregion
5027133RH44652158107208109272081250Ratregion
5051160RH134474195107033360870333803Ratregion
5056855RH144619538107310151773102055Ratregion
5059350AI059154716106833171768332433Ratregion
5054287RH143138247107055836770558614Ratregion
5044856RH130843968107305442673055394Ratregion
5048888RH133164218106751562467515842Ratregion
5042558RH129507210107201675972016969Ratregion
5043048RH129799186107360837973608565Ratregion
5042742RH129619438107288753072887968Ratregion
5071058RH134862203106839204768392250Ratregion
5083869AA943013328107182037471820702Ratregion
5505101Ptrh2112107200980672009918Ratregion
5505184Lig3865106822467768225542Ratregion
5499559Epx889107316482773165716Ratregion
5502499RH125101259107202526572025524Ratregion
Position Markers

Flank 1: (D10Rat27)
Rat AssemblyChrPosition (strand)Source
GRCr81073,950,209 - 73,950,353 (+)Marker Load Pipeline
mRatBN7.21073,452,992 - 73,453,136 (+)MAPPER
Rnor_6.01075,983,662 - 75,983,805NCBI
Rnor_5.01074,127,825 - 74,127,968UniSTS
RGSC_v3.41077,091,834 - 77,092,169RGD
RGSC_v3.41077,091,892 - 77,092,035UniSTS
RGSC_v3.11077,106,262 - 77,106,405RGD
Celera1072,360,629 - 72,360,772UniSTS
RH 3.4 Map10681.99RGD
RH 3.4 Map10681.99UniSTS
RH 2.0 Map10766.2RGD
SHRSP x BN Map1050.9999RGD
FHH x ACI Map1059.2399RGD
Cytogenetic Map10q26UniSTS
Flank 2: (D10Rat98)
Rat AssemblyChrPosition (strand)Source
GRCr81067,439,246 - 67,439,473 (+)Marker Load Pipeline
mRatBN7.21066,941,586 - 66,941,813 (+)MAPPER
Rnor_6.01069,348,233 - 69,348,459NCBI
Rnor_5.01068,983,628 - 68,983,854UniSTS
RGSC_v3.41070,191,139 - 70,191,595RGD
RGSC_v3.41070,191,315 - 70,191,541UniSTS
RGSC_v3.11070,204,762 - 70,205,218RGD
Celera1065,889,346 - 65,889,572UniSTS
RH 2.0 Map10664.3RGD
SHRSP x BN Map1047.6099RGD
FHH x ACI Map1054.8199RGD
Cytogenetic Map10q26UniSTS


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1549846Scl47Serum cholesterol level QTL 473.6blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)105107189796071897Rat
1578779Tcas10Tongue tumor susceptibility QTL 103.12tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)103179628176796281Rat
631565Hcuc4Hepatic copper content QTL 44.15liver copper amount (VT:0003065)liver copper weight to liver dry weight ratio (CMO:0001512)106743947373950209Rat
1298069Bp168Blood pressure QTL 1685.5blood pressure trait (VT:0000183)systolic blood pressure (CMO:0000004)102702353598502431Rat
8657410Bp374Blood pressure QTL 374heart left ventricle size trait (VT:0002753)heart left ventricle end-diastolic diameter (CMO:0000982)1067476608107713808Rat
2293669Bmd33Bone mineral density QTL 334.50.0001femur strength trait (VT:0010010)femoral neck polar moment of inertia (CMO:0001670)102744378772443787Rat
631552Vetf2Vascular elastic tissue fragility QTL 24.50.0002aorta elastic tissue integrity trait (VT:0010556)artery internal elastic lamina non-tumorous lesion count (CMO:0001913)103550938391417879Rat
61449Ciaa2CIA Autoantibody QTL 27.1blood autoantibody amount (VT:0003725)calculated serum anti-type 2 collagen antibody titer (CMO:0001279)1063719161107713808Rat
631557Bp136Blood pressure QTL 1360.003arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)105686844076129113Rat
61325Aia5Adjuvant induced arthritis QTL 50.01joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1023948641107713808Rat
2293679Bmd30Bone mineral density QTL 303.50.0001femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)102744378772443787Rat
1298078Stresp5Stress response QTL 52.990.00025blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)1042546145107713808Rat
1549831Bss6Bone structure and strength QTL 64lumbar vertebra strength trait (VT:0010574)vertebra ultimate force (CMO:0001678)1058073360103073360Rat
12903252Cm113Cardiac mass QTL 1130.047heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)1066817119107713808Rat
70164Bw21Body weight QTL 214.360.00005body mass (VT:0001259)body weight (CMO:0000012)105429633699451733Rat
61463Bp12Blood pressure QTL 126.30.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)104183127886831278Rat
1579919Bp281Blood pressure QTL 2810.01arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)105046480295464802Rat
2298548Neuinf7Neuroinflammation QTL 73.4nervous system integrity trait (VT:0010566)spinal cord RT1-B protein level (CMO:0002132)1064939013107713808Rat
8694173Bw149Body weight QTL 1494.380.001body mass (VT:0001259)body weight gain (CMO:0000420)104493935989939359Rat
2300218Hpcl2Hepatic cholesterol level QTL 2liver cholesterol amount (VT:0010498)liver cholesterol level (CMO:0001597)104552916496099749Rat
70168Eae12Experimental allergic encephalomyelitis QTL 120.0009nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)1073599825107713808Rat
70171Cari1Carrageenan-induced inflammation QTL 14.90.0005hypodermis integrity trait (VT:0010550)inflammatory exudate volume (CMO:0001429)1054296227107713808Rat
2289982Bp303Blood pressure QTL 303arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)107395020976129113Rat
12903269Am15Aortic mass QTL 150.042aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)1066817119107713808Rat
10450493Bp382Blood pressure QTL 3820.002arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)105086028895860288Rat
724527Bp148Blood pressure QTL 1480.0001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)102895035373950353Rat
12903266Cm114Cardiac mass QTL 1140.02heart right ventricle mass (VT:0007033)heart right ventricle weight to body weight ratio (CMO:0000914)1066817119107713808Rat
2300171Bmd58Bone mineral density QTL 584.90.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)102744378772443787Rat
61354Pia10Pristane induced arthritis QTL 100.01joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1023948641107713808Rat
2301967Cm73Cardiac mass QTL 734.55heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)101499153586964295Rat
2313103Bss80Bone structure and strength QTL 8020.0001tibia strength trait (VT:1000284)tibia midshaft endosteal cross-sectional area (CMO:0001716)1062556066107556066Rat
70188BpQTLcluster1Blood pressure QTL cluster 14.864arterial blood pressure trait (VT:2000000)pulse pressure (CMO:0000292)14282327487823274Rat
12880372Am12Aortic mass QTL 120.003aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)1066817119107713808Rat
70193Mcs7Mammary carcinoma susceptibility QTL 72.38mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)1072724423107713808Rat
2313105Bss79Bone structure and strength QTL 791.80.0001tibia size trait (VT:0100001)tibia midshaft cross-sectional area (CMO:0001717)1062556066107556066Rat
12880375Kidm66Kidney mass QTL 660.009kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)1066817119107713808Rat
9589030Epfw9Epididymal fat weight QTL 919.240.001epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)104493935989939359Rat
1357344Bp249Blood pressure QTL 2490.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)106724133498502431Rat
2316949Gluco60Glucose level QTL 603.7blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)1014991535107556066Rat
2293652Bmd22Bone mineral density QTL 224.90.0001femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)102744378772443787Rat
12880370Cm105Cardiac mass QTL 1050.008heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)1066817119107713808Rat
70198BpQTLcluster9Blood pressure QTL cluster 92.94arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)104282327487823274Rat
12880371Cm106Cardiac mass QTL 1060.007heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)1066817119107713808Rat
2306970Anxrr22Anxiety related response QTL 225.95fear/anxiety-related behavior trait (VT:1000241)number of periods of voluntary immobility (CMO:0001045)106184349698710773Rat
11565453Kidm58Kidney mass QTL 580.002kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)1066817119107713808Rat
1359017Hrtrt21Heart rate QTL 212.4heart pumping trait (VT:2000009)heart rate (CMO:0000002)107369533997272278Rat
2306787Ean3Experimental allergic neuritis QTL 33.1nervous system integrity trait (VT:0010566)body weight loss (CMO:0001399)105429622767476781Rat
724555Bp150Blood pressure QTL 1500.0001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)107395020978707585Rat
2317029Aia19Adjuvant induced arthritis QTL 192.98joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)106747660873695498Rat
724556Pur2Proteinuria QTL 25.5urine protein amount (VT:0005160)urine protein level (CMO:0000591)102293137391127454Rat
8662860Vetf10Vascular elastic tissue fragility QTL 10artery integrity trait (VT:0010639)number of ruptures of the internal elastic lamina of the abdominal aorta and iliac arteries (CMO:0002562)10666092373950353Rat
2306793Ean5Experimental allergic neuritis QTL 54.7nervous system integrity trait (VT:0010566)IFNG-secreting splenocyte count (CMO:0002122)107304965694495280Rat
2306792Ean4Experimental allergic neuritis QTL 44nervous system integrity trait (VT:0010566)IFNG-secreting splenocyte count (CMO:0002122)104949549294495492Rat
61387Bp1Blood pressure QTL 15.1arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)1052269185107713808Rat
2317039Aia6Adjuvant induced arthritis QTL 64.31joint integrity trait (VT:0010548)right rear ankle joint diameter (CMO:0002150)106747660873695498Rat
1354587Kidm21Kidney mass QTL 213.3kidney mass (VT:0002707)right kidney wet weight (CMO:0000082)101553301273695498Rat
634329Pia15Pristane induced arthritis QTL 153.1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)102466212373695339Rat
2317043Aia7Adjuvant induced arthritis QTL 73.82joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)107369533983061459Rat
2317042Aia20Adjuvant induced arthritis QTL 203.38joint integrity trait (VT:0010548)right rear ankle joint diameter (CMO:0002150)107369533983061459Rat
2298481Eau9Experimental allergic uveoretinitis QTL 90.0169uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)106413959783061459Rat
2298480Eau7Experimental allergic uveoretinitis QTL 70.0049uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)103550938380509383Rat
61396Bp9Blood pressure QTL 94.80.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1068920187107713808Rat
1358915Stresp7Stress response QTL 73.52blood norepinephrine amount (VT:0005663)plasma norepinephrine level (CMO:0001010)1065307813107713808Rat
70363Bp71Blood pressure QTL 710.04arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1061843496106843496Rat
61402Niddm3Non-insulin dependent diabetes mellitus QTL 34.58blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)106184363383061236Rat
1331791Cm31Cardiac mass QTL 313.84606heart mass (VT:0007028)heart wet weight (CMO:0000069)102980091091417879Rat
6893366Bw106Body weight QTL 1060.30.47body mass (VT:0001259)body weight (CMO:0000012)1070698731107713808Rat
631530Tls3T-lymphoma susceptibility QTL 300.0001thymus integrity trait (VT:0010555)percentage of study population developing T-cell lymphomas during a period of time (CMO:0001911)102758722696099902Rat
2289985Bp305Blood pressure QTL 305arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)102907697874076978Rat
1354608Cm33Cardiac mass QTL 332.8heart left ventricle mass (VT:0007031)heart left ventricle wet weight (CMO:0000071)105530797293608131Rat
1558643Cm44Cardiac mass QTL 444.80.0000368heart mass (VT:0007028)heart wet weight (CMO:0000069)1061843496100198886Rat
8552805Bw145Body weight QTL 1452.2body mass (VT:0001259)change in body weight to body weight ratio (CMO:0002216)104360879388608793Rat
631267Cia20Collagen induced arthritis QTL 203.2joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1023948641107713808Rat
2293705Bmd25Bone mineral density QTL 257.10.0001femur mineral mass (VT:0010011)compact volumetric bone mineral density (CMO:0001730)102744378772443787Rat
1331839Eae18bExperimental allergic encephalomyelitis QTL 18b5.80.03nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis severity score (CMO:0001419)106174653268282731Rat
631269Cia22Collagen induced arthritis QTL 228.9joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1040535708107713808Rat
1576308Schws1Schwannoma susceptibility QTL 10.0041nervous system integrity trait (VT:0010566)percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)1040535708107713808Rat
631268Cia21Collagen induced arthritis QTL 213.1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1014991535107713808Rat
7207811Bmd90Bone mineral density QTL 905.2femur size trait (VT:1000369)femoral neck cross-sectional area (CMO:0001697)104994371094943710Rat
1576311Pia26Pristane induced arthritis QTL 26joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)103112911376129113Rat
631270Cia23Collagen induced arthritis QTL 233.9joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1040535708107713808Rat
7411614Foco18Food consumption QTL 180.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)104493935989939359Rat
1581559Eae18Experimental allergic encephalomyelitis QTL 180.00002nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis severity score (CMO:0001419)1066108888107555881Rat
6893336Cm75Cardiac mass QTL 750.10.87heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)1061843496100198886Rat
12880053Cm104Cardiac mass QTL 1040.009heart right ventricle mass (VT:0007033)heart right ventricle weight to body weight ratio (CMO:0000914)107395020983959619Rat
631547Bp87Blood pressure QTL 874.5arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)104786912992869129Rat
61427Cia16Collagen induced arthritis QTL 163.2joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)10686461896620484Rat
12880050Am10Aortic mass QTL 100.016aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)103950348784503487Rat
2292436Bp310Blood pressure QTL 310arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)105060467795604677Rat
6893342Cm78Cardiac mass QTL 780.10.88heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)103550938388177745Rat
1600367Mcs15Mammary carcinoma susceptibility QTL 154.5mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)1072724423107713808Rat
634354Rends3Renal damage susceptibility QTL 30.05kidney blood vessel morphology trait (VT:0000530)organ lesion measurement (CMO:0000677)1061997479106997479Rat
2301405Cm69Cardiac mass QTL 690.031heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)1066817119107713808Rat
631542Bp82Blood pressure QTL 826.8arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)102702353599451848Rat


Additional Information

Database Acc Id Source(s)
NCBI Gene Hcuc4

RGD Curation Notes
Note Type Note Reference