Ean3 QTL Report (Rattus norvegicus) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
QTL Registration

QTL: Ean3 (Experimental allergic neuritis QTL 3) Rattus norvegicus

Symbol: Ean3
Name: Experimental allergic neuritis QTL 3
RGD ID: 2306787
Trait: nervous system integrity trait   (VT:0010566)    
Measurement Type: body weight loss   (CMO:0001399)    
LOD Score: 3.1
P Value: Not Available
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr81054,296,227 - 67,476,781RGD_MAPPER_PIPELINE
mRatBN7.21053,797,385 - 66,979,128RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01055,678,976 - 69,385,767RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01055,422,036 - 69,020,609RGDRnor5.0
RGSC_v3.41055,851,702 - 70,229,954RGDRGSC3.4
Cross Type: intercross
Strains Crossed: Kini:DA,PVG-G12 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method
scale  (IDA)

Vertebrate Trait

Rat Strain

References

References - curated
# Reference Title Reference Citation
1. Advanced intercross line mapping suggests that ncf1 (ean6) regulates severity in an animal model of guillain-barre syndrome. Huberle A, etal., J Immunol. 2009 Apr 1;182(7):4432-8.
Related QTLs

Related QTL Description Reference
Cia27 maps to same region RGD:2306769
Eae18a maps to same region RGD:2306769


Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
3949Vamp2vesicle-associated membrane protein 2105379358153797815Rat
727863Per1period circadian regulator 1105380012653814963Rat
11499743Trnat-agu4transfer RNA threonine (anticodon AGU) 4105381545753815530Rat
11393487Trnas-cga2transfer RNA serine (anticodon CGA) 2105381594853816029Rat
9313918LOC103693354uncharacterized LOC103693354105382390453827703Rat
11415587Trnag-gcc2transfer RNA glycine (anticodon GCC) 2105382396053824030Rat
1305914Hes7hes family bHLH transcription factor 7105382412453828934Rat
11505532Trnar-ucu4transfer RNA arginine (anticodon UCU) 4105382851753828603Rat
11458838Trnal-uag2transfer RNA leucine (anticodon UAG) 2105382911953829200Rat
11413702Trnaq-cug6transfer RNA glutamine (anticodon CUG) 6105382948953829560Rat
11497110Trnak-uuu4transfer RNA lysine (anticodon UUU) 4105383004653830118Rat
1306252Aloxe3arachidonate epidermal lipoxygenase 3105383021953854328Rat
2323798Rpl37al1ribosomal protein L37A like 1105385911753859712Rat
1305330Alox12barachidonate 12-lipoxygenase, 12R type105386306053874938Rat
628809Alox15barachidonate 15-lipoxygenase, type B105389249653901812Rat
620438Gucy2eguanylate cyclase 2E105395491853975576Rat
41021983LOC120095371U6 spliceosomal RNA105397692453977028Rat
1307488Cntrobcentrobin, centriole duplication and spindle assembly protein105402252354047793Rat
1311365Trappc1trafficking protein particle complex subunit 1105404559854047184Rat
61830Kcnab3potassium voltage-gated channel subfamily A regulatory beta subunit 3105404783054056401Rat
1563441Rnf227ring finger protein 227105406105454063015Rat
1311923Chd3chromodomain helicase DNA binding protein 3105406362954090030Rat
41160913Scarna21small Cajal body-specific RNA 21105407095954071098Rat
1559567Cyb5d1cytochrome b5 domain containing 1105411342854117744Rat
1559617Naa38N(alpha)-acetyltransferase 38, NatC auxiliary subunit105411775454118913Rat
1561781Tmem88transmembrane protein 88105411875254120447Rat
1307629Kdm6blysine demethylase 6B105412071654142212Rat
1565087Dnah2dynein, axonemal, heavy chain 2105414264854268901Rat
7527073LOC102557224uncharacterized LOC102557224105419771454201762Rat
2541Efnb3ephrin B3105427450654281951Rat
1359624Wrap53WD repeat containing, antisense to TP53105428209254299908Rat
3889Tp53tumor protein p53105430007054311525Rat
2171Atp1b2ATPase Na+/K+ transporting subunit beta 2105431869854324933Rat
3671Shbgsex hormone binding globulin105433293954350409Rat
1307869Sat2spermidine/spermine N1-acetyltransferase family member 2105434075654343507Rat
1307011Fxr2FMR1 autosomal homolog 2105435057754370964Rat
1312022Sox15SRY-box transcription factor 15105437304554374749Rat
1307699Mpdu1mannose-P-dolichol utilization defect 1105437471954380301Rat
1305970Cd68Cd68 molecule105438181454383693Rat
735141Eif4a1eukaryotic translation initiation factor 4A1105438434554389855Rat
41317947Snora67small nucleolar RNA, H/ACA box 67105438527654385418Rat
40947074Snord10small nucleolar RNA, C/D box 10105438629054386431Rat
41267437LOC120095433small nucleolar RNA SNORA48105438718554387327Rat
41212261Eif4a1leukaryotic translation initiation factor 4A1 like105438903054402545Rat
1312040Senp3SUMO specific peptidase 3105439069854399590Rat
1305871Tnfsf13TNF superfamily member 13105440005454403723Rat
1359620Tnfsf12TNF superfamily member 12105440387054413213Rat
41046939Rpl13-ps19ribosomal protein L13, pseudogene 19105444330154452286Rat
1587326Polr2aRNA polymerase II subunit A105445243854478486Rat
1308025Slc35g3solute carrier family 35, member G3105447879654481543Rat
1307184Zbtb4zinc finger and BTB domain containing 4105448069854501492Rat
2349Chrnb1cholinergic receptor nicotinic beta 1 subunit105450109654516418Rat
620162Fgf11fibroblast growth factor 11105451650854522067Rat
1559450Tmem102transmembrane protein 102105452390154525997Rat
7642598Spem3SPEM family member 3105453208354536318Rat
1565061Spem2SPEM family member 2105453716854539026Rat
1593311Spem1spermatid maturation 1105454145454542755Rat
621118Nlgn2neuroligin 2105454446154557854Rat
1563438Tmem256transmembrane protein 256105455903054560146Rat
1307016Plscr3phospholipid scramblase 3105456655654573240Rat
1310113Tnk1tyrosine kinase, non-receptor, 1105457139654580547Rat
1593310Tmem95transmembrane protein 95105459979954601746Rat
1307125Kctd11potassium channel tetramerization domain containing 11105460257554604738Rat
1305360Acap1ArfGAP with coiled-coil, ankyrin repeat and PH domains 1105460532354619472Rat
1563007Ppp1r2l1protein phosphatase 1, regulatory (inhibitor) subunit 2 like 1105461986354624720Rat
1308056Neurl4neuralized E3 ubiquitin protein ligase 4105462492354637262Rat
1562746Gps2G protein pathway suppressor 2105463736054640542Rat
1308029Eif5aeukaryotic translation initiation factor 5A105464010454644845Rat
1305068Ybx2Y box binding protein 2105465971954665371Rat
2711Slc2a4solute carrier family 2 member 4105466601554671581Rat
7673189LOC102555366cofilin-1-like105467312254675094Rat
68432Cldn7claudin 7105468968454692177Rat
1303303Elp5elongator acetyltransferase complex subunit 5105469252654704255Rat
1310172Ctdnep1CTD nuclear envelope phosphatase 1105470436754713781Rat
61911GabarapGABA type A receptor-associated protein105471477754718099Rat
1302969Phf23PHD finger protein 23105471866354722784Rat
1309725Dvl2dishevelled segment polarity protein 2105472335654732823Rat
2014Acadvlacyl-CoA dehydrogenase, very long chain105473287554738102Rat
2325436Mir324microRNA 324105473468054734762Rat
68424Dlg4discs large MAGUK scaffold protein 4105474070054769097Rat
2160Asgr1asialoglycoprotein receptor 1105477572754779642Rat
41020996Trnat-agu28transfer RNA threonine (anticodon AGU) 28105478231054782382Rat
11375109Sec61gl5SEC61 translocon subunit gamma like 5105479541354795676Rat
2161Asgr2asialoglycoprotein receptor 2105482140754834624Rat
621158Clec10aC-type lectin domain containing 10A105487624454880439Rat
1359138Slc16a13solute carrier family 16, member 13105492597354937860Rat
1311125Slc16a11solute carrier family 16, member 11105492912954933021Rat
1563179Bcl6bBCL6B, transcription repressor105494090854947022Rat
41381824LOC120095129uncharacterized LOC120095129105494413354945385Rat
2325364Mir497microRNA 497105495151454951582Rat
2325346Mir195microRNA 195105495183854951924Rat
1308134Bacc1BPTF associated chromatin complex component 1105495199154954756Rat
1305687Rnasekribonuclease K105495490454956622Rat
1311159Alox12arachidonate 12-lipoxygenase, 12S type105495826354970542Rat
1307642Alox12earachidonate 12-lipoxygenase, epidermal105503439255041857Rat
70493Alox15arachidonate 15-lipoxygenase105506016955068885Rat
1306320Pelp1proline, glutamate and leucine rich protein 1105509479855111833Rat
2157Arrb2arrestin, beta 2105514688755154854Rat
1563202Med11mediator complex subunit 11105516432255165940Rat
1562928Cxcl16C-X-C motif chemokine ligand 16105516672155171316Rat
1309845Zmynd15zinc finger, MYND-type containing 15105517119855177812Rat
1308709Tm4sf5transmembrane 4 L six family member 5105521938455225742Rat
1559861Vmo1vitelline membrane outer layer 1 homolog105522794455234794Rat
1560459Gltpd2glycolipid transfer protein domain containing 2105523356355236125Rat
61881Psmb6proteasome 20S subunit beta 6105523925655241586Rat
2319497Tomm7-ps4translocase of outer mitochondrial membrane 7, pseudogene 4105524649955253279Rat
3350Pld2phospholipase D2105525632655274192Rat
1359135Mink1misshapen-like kinase 1105527829355330782Rat
2353Chrnecholinergic receptor nicotinic epsilon subunit105533121155339923Rat
1597577C10h17orf107similar to human chromosome 17 open reading frame 107105533206755333199Rat
1593301Rpl36al-ps2ribosomal protein L36A, pseudogene 2105534345755343858Rat
1310239Gp1baglycoprotein Ib platelet subunit alpha105535293855355804Rat
708476Slc25a11solute carrier family 25 member 11105535759055360441Rat
1305972Rnf167ring finger protein 167105536060355364927Rat
621825Pfn1profilin 1105536526355367968Rat
2555Eno3enolase 3105537053155375921Rat
1305473Spag7sperm associated antigen 7105537724955383404Rat
1311296Camta2calmodulin binding transcription activator 2105538345055401838Rat
1306656Inca1inhibitor of CDK, cyclin A1 interacting protein 1105540198955414364Rat
41216276LOC120095492small nucleolar RNA U3105541149055411704Rat
70928Kif1ckinesin family member 1C105541441255444587Rat
40946213LOC120095361U6 spliceosomal RNA105542206955422172Rat
40938096LOC120095132uncharacterized LOC120095132105545827555464324Rat
1565881Zfp3zinc finger protein 3105547842455486686Rat
1593299ScimpSLP adaptor and CSK interacting membrane protein105550764655527764Rat
41130072LOC120095133uncharacterized LOC120095133105554279555563841Rat
708568Rabep1rabaptin, RAB GTPase binding effector protein 1105556615655667595Rat
41287325Trnas-aga18transfer RNA serine (anticodon AGA) 18105557552155575593Rat
620182Nup88nucleoporin 88105566790355692249Rat
1308492RpainRPA interacting protein105569241055699910Rat
2230C1qbpcomplement C1q binding protein105569995455704605Rat
1307239Dhx33DEAH-box helicase 33105570810255724618Rat
6496100Derl2derlin 2105572776455739442Rat
1564837Mis12MIS12 kinetochore complex component105573974155747915Rat
11405522LOC108352102chromobox protein homolog 3 pseudogene105575111555753851Rat
15932976330403K07RiklRIKEN cDNA 6330403K07 gene like105575561155757162Rat
1310963Nlrp1aNLR family, pyrin domain containing 1A105577856055833639Rat
1593294Nlrp1bNLR family, pyrin domain containing 1B105583838155904374Rat
1310602Ankrd40-ps2ankyrin repeat domain 40, pseudogene 2105591658255917772Rat
41251551LOC120095447small nucleolar RNA SNORA17105591912355919254Rat
7614296LOC102547395uncharacterized LOC102547395105633737456348553Rat
7701476LOC102547579uncharacterized LOC102547579105635448856384414Rat
1308212Wscd1WSC domain containing 1105638585856426442Rat
41277263LOC120095135uncharacterized LOC120095135105643903856459676Rat
41229016LOC120095327uncharacterized LOC120095327105645983556462713Rat
41173355LOC120095446small nucleolar RNA SNORA17105648235456482485Rat
7650893LOC102547851uncharacterized LOC102547851105655855556622104Rat
70906Aipl1aryl hydrocarbon receptor-interacting protein-like 1105665569356664922Rat
1308747PimregPICALM interacting mitotic regulator105666960356674540Rat
1308200Pitpnm3PITPNM family member 3105667469756766552Rat
13047284933427D14RiklRIKEN cDNA 4933427D14 gene like105678386956832668Rat
1308868Txndc17thioredoxin domain containing 17105683274956835721Rat
1309457Med31mediator complex subunit 31105683694456840326Rat
6486589C10h17orf100similar to human chromosome 17 open reading frame 100105684045156843674Rat
631374Slc13a5solute carrier family 13 member 5105686624956891189Rat
7676861LOC102548703probable serine/threonine-protein kinase drkD-like105690698356930190Rat
1585988Xaf1XIAP associated factor 1105691737856929791Rat
1311464Fbxo39F-box protein 39105692969956934911Rat
619913Tekt1tektin 1105695216456980572Rat
1585960Smtnl2smoothelin-like 2105700832257029505Rat
1303335Ggt6gamma-glutamyl transferase 6105705197757054900Rat
62062Mybbp1aMYB binding protein 1a105705689757067258Rat
2303312Spns2SPNS lysolipid transporter 2, sphingosine-1-phosphate105706734857105969Rat
1561884Spns3SPNS lysolipid transporter 3, sphingosine-1-phosphate105711424757169056Rat
620392Ube2g1ubiquitin-conjugating enzyme E2G 1105722596357306748Rat
7553451Rpl17-ps5ribosomal protein L17, pseudogene 5105729452957295230Rat
1309598Ankfy1ankyrin repeat and FYVE domain containing 1105731224657383964Rat
1359124Cyb5d2cytochrome b5 domain containing 2105739426857413336Rat
1311189Zzef1zinc finger ZZ-type and EF-hand domain containing 1105741326557550888Rat
7699687Rps27-ps2ribosomal protein S27, pseudogene 2105743998557440286Rat
41344211LOC120095437small nucleolar RNA SNORA48105746106957461206Rat
41352437LOC120095418U1 spliceosomal RNA105749985457500017Rat
41131756Trnap-ggg6transfer RNA proline (anticodon GGG) 6105751059057510670Rat
2175Atp2a3ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3105758174257612758Rat
3240P2rx1purinergic receptor P2X 1105761858657633648Rat
62023Camkk1calcium/calmodulin-dependent protein kinase kinase 1105763733557660498Rat
1308139Ncbp3nuclear cap binding subunit 3105766571657695432Rat
621644Itgaeintegrin subunit alpha E105770481357764093Rat
1596276Haspinhistone H3 associated protein kinase105774773157750518Rat
11486590LOC108352105uncharacterized LOC108352105105777415057777690Rat
620256P2rx5purinergic receptor P2X 5105777773757789426Rat
1309231Emc6ER membrane protein complex subunit 6105779407257795671Rat
1308924Tax1bp3Tax1 binding protein 3105779584557800363Rat
1308466Ctnscystinosin, lysosomal cystine transporter105780155157817213Rat
1308004Shpksedoheptulokinase105781755157841981Rat
628841Trpv1transient receptor potential cation channel, subfamily V, member 1105785142857876513Rat
1564531Trpv3transient receptor potential cation channel, subfamily V, member 3105788354657915865Rat
621693Aspaaspartoacylase105789170457945267Rat
1565378Spata22spermatogenesis associated 22105794527257963081Rat
1333989Or1e1olfactory receptor family 1 subfamily E member 1105797551957976463Rat
1334228Or1e1colfactory receptor family 1 subfamily E member 1C105798641757987370Rat
9229044LOC103693362uncharacterized LOC103693362105800050358011699Rat
1334190Or1e18olfactory receptor family 1 subfamily E member 18105800925258010196Rat
2323480Ly6e-ps1lymphocyte antigen 6 family member E, pseudogene 1105801110558011735Rat
1359186Olr1469olfactory receptor Olr1469105802506658026010Rat
1333590Or1e16dolfactory receptor family 1 subfamily E member 16D105803624258037186Rat
1332981Olr1471olfactory receptor 1471105805734558058286Rat
1334083Or1e21olfactory receptor family 1 subfamily E member 21105806991058070845Rat
1334012Olr1473-psolfactory receptor pseudogene 1473105810135358102121Rat
1332851Or1e20bolfactory receptor family 1 subfamily E member 20B105815180858152746Rat
1332756Or1e22olfactory receptor family 1 subfamily E member 22105817700158177939Rat
1333378Or1e19b-ps1olfactory receptor family 1 subfamily E member 19, pseudogene 1105819600958196513Rat
1333017Or1e21bolfactory receptor family 1 subfamily E member 21B105821468758215622Rat
1332858Or1e20-ps1olfactory receptor family 1 subfamily E member 20, pseudogene 1105822292158223861Rat
1333952Olr1481olfactory receptor 1481105823788658238830Rat
1333012Or1e16olfactory receptor family 1 subfamily E member 16105827403958274983Rat
2323127Ly6e-ps2lymphocyte antigen 6 family member E, pseudogene 2105828770758288311Rat
1333296Or1e18b-ps1olfactory receptor family 1 subfamily E member 18, pseudogene 1105828917358290117Rat
1333474Olr1484-psolfactory receptor pseudogene 1484105830532158305401Rat
1333644Or1e23olfactory receptor family 1 subfamily E member 23105830532158315807Rat
1333088Or1e26bolfactory receptor family 1 subfamily E member 26B105834934858350286Rat
1334004Olr1477-psolfactory receptor pseudogene 1477105836833958369460Rat
1332828Or1e26-ps1olfactory receptor family 1 subfamily E member 26, pseudogene 1105839491058395850Rat
1333517Or1e27olfactory receptor family 1 subfamily E member 27105840634458407282Rat
1332668Olr1489-psolfactory receptor pseudogene 1489105842187558422035Rat
1333612Or1e27bolfactory receptor family 1 subfamily E member 27B105843438958435327Rat
1333854Or1e25olfactory receptor family 1 subfamily E member 25105844633258447270Rat
1332844Or1e28olfactory receptor family 1 subfamily E member 28105846875258469690Rat
1549701Olr1493olfactory receptor gene Olr1493105849570958496647Rat
41219772LOC120095328olfactory receptor 1500-like105852657358527511Rat
1333627Or1e30-ps1olfactory receptor family 1 subfamily E member 30, pseudogene 1105853934058539976Rat
1332757Or1e31olfactory receptor family 1 subfamily E member 30105854602058546952Rat
1333616Or1e29-ps1olfactory receptor family 1 subfamily E member 29, pseudogene 1105857792158578858Rat
1334181Or1e32olfactory receptor family 1 subfamily E member 32105858327058584208Rat
1333585Or1e33olfactory receptor family 1 subfamily E member 33105861421758615152Rat
1596224Olr1468-ps1olfactory receptor 1468, pseudogene 1105865364758654541Rat
1596222Or1e34olfactory receptor family 1 subfamily E member 34105866765758668595Rat
41230289LOC120095497U6 spliceosomal RNA105870256458702670Rat
1334013Olr1500olfactory receptor 1500105871395058714888Rat
1333253Or1e1eolfactory receptor family 1 subfamily E member 1E105875443258755367Rat
1592971Or1e35olfactory receptor family 1 subfamily E member 35105877702858777966Rat
1333252Or1y1-ps1olfactory receptor family 1 subfamily Y member 1, pseudogene 1105879054558791005Rat
1333178Or1e35bolfactory receptor family 1 subfamily E member 35B105879721258798150Rat
1334253Olr1505olfactory receptor 1505105883756858838503Rat
1596210Or1e1dolfactory receptor family 1 subfamily E member 1D105886204858862983Rat
1596207Or1e1fl1olfactory receptor family 1 subfamily E member 1F like 1105887515558876105Rat
1333058Or1r1olfactory receptor family 1 subfamily R member 1105889035758891301Rat
1333915Or3a10-ps1olfactory receptor family 3 subfamily A member 10, pseudogene 1105895514458956290Rat
1334195Or3a4olfactory receptor family 3 subfamily A member 4105896724458968179Rat
1334158Or3a1g-ps1olfactory receptor family 3 subfamily A member 1G, pseudogene 1105898225058983189Rat
1598228Ubap2l-ps1ubiquitin-associated protein 2-like, pseudogene 1105899013158993082Rat
1333146Or3a1folfactory receptor family 3 subfamily A member 1F105900005359001000Rat
1334237Or3a1eolfactory receptor family 3 subfamily A member 1E105902335359024300Rat
1332685Or1a1olfactory receptor family 1 subfamily A member 1105905894159059879Rat
1334436Or1a1bolfactory receptor family 1 subfamily A member 1B105907023959071183Rat
1332804Or1p1eolfactory receptor family 1 subfamily P member 1E105909353159094502Rat
1333482Or1p1olfactory receptor family 1 subfamily P member 1105913079659131767Rat
1333892Or3a1olfactory receptor family 3 subfamily A member 1105914707559148022Rat
40974852LOC120095377U6 spliceosomal RNA105915107859151136Rat
1332960Olr1518-psolfactory receptor pseudogene 1518105918753959188242Rat
1333845Or1d2olfactory receptor family 1 subfamily D member 2105921294759213882Rat
1563134Rpl29l6ribosomal protein L29 like 6105921793159218554Rat
1332930Olr1520olfactory receptor 1520105923700359237938Rat
1304590Rap1gap2RAP1 GTPase activating protein 2105925540059472536Rat
1562276Ccdc92bcoiled-coil domain containing 92B105947979859501486Rat
41260746LOC120095138ATP synthase subunit e, mitochondrial-like105950223859503061Rat
1307222Cluhclustered mitochondria homolog105950958059531345Rat
620331Pafah1b1platelet-activating factor acetylhydrolase 1b, regulatory subunit 1105953304259591808Rat
41163241LOC120095365U6 spliceosomal RNA105959581859595922Rat
41388596LOC120095488U2 spliceosomal RNA105963677259636857Rat
1593242Mettl16methyltransferase 16, RNA N6-adenosine105964091559697291Rat
1308683MntMAX network transcriptional repressor105969920859714848Rat
1306957Sgsm2small G protein signaling modulator 2105971818059759822Rat
2322150Tsr1TSR1, ribosome maturation factor105976042059771868Rat
40996527LOC120095462small nucleolar RNA SNORD91 family105976825759768349Rat
41255405LOC120095461small nucleolar RNA SNORD91 family105976896759769057Rat
735094Srrserine racemase105976956359786688Rat
1595918Smg6SMG6 nonsense mediated mRNA decay factor105978625860014395Rat
40962770LOC120095370U6 spliceosomal RNA105979642959796515Rat
1307527Hic1HIC ZBTB transcriptional repressor 1106001452060019475Rat
2325376Mir212microRNA 212106002340360023513Rat
2325572Mir132microRNA 132106002369660023796Rat
41336825LOC120095261uncharacterized LOC120095261106002380560025404Rat
1564623Ovca2OVCA2 serine hydrolase domain containing106002604860029211Rat
1562694Dph1diphthamide biosynthesis 1106002808160039764Rat
727812Rtn4rl1reticulon 4 receptor-like 1106004324660116977Rat
41404273LOC120095264uncharacterized LOC120095264106007849360085842Rat
41366645LOC120095262ATP synthase subunit g, mitochondrial-like106009245860098807Rat
1307376Rpa1replication protein A1106014886960199970Rat
41241343Fbxo5-ps1F-box protein 5, pseudogene 1106018104060182414Rat
1307369Smyd4SET and MYND domain containing 4106020006760246387Rat
1587037Rpl37-ps4ribosomal protein L37, pseudogene 4106020905660209726Rat
631369Serpinf1serpin family F member 1106025019860262593Rat
1306692Serpinf2serpin family F member 2106027240060280506Rat
1311334Wdr81WD repeat domain 81106028196960295374Rat
7489039Mir6326microRNA 6326106030678660306896Rat
2325597Mir22microRNA 22106030703960307133Rat
1562631Tlcd2TLC domain containing 2106031057760314263Rat
1305467Prpf8pre-mRNA processing factor 8106033149460354606Rat
1307691RilpRab interacting lysosomal protein106035527660358434Rat
1309330Scarf1scavenger receptor class F, member 1106035921360371516Rat
1305819Slc43a2solute carrier family 43 member 2106037546260420838Rat
61885Pitpnaphosphatidylinositol transfer protein, alpha106043071260473564Rat
7616496Gpx4-ps2glutathione peroxidase 4, pseudogene 2106046700960467698Rat
1359130Inpp5kinositol polyphosphate-5-phosphatase K106047426260495813Rat
620443Myo1cmyosin 1C106049837260520752Rat
2405CrkCRK proto-oncogene, adaptor protein106053046960556703Rat
41008485LOC120095485U2 spliceosomal RNA106056179960561883Rat
62000Ywhaetyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon106058466560622352Rat
41353991Trnat-agu17transfer RNA threonine (anticodon AGU) 17106059909960599173Rat
620519Doc2bdouble C2 domain beta106062802960653267Rat
41351485LOC120095350U6 spliceosomal RNA106064619460646294Rat
7622441LOC102549294uncharacterized LOC102549294106065320560724367Rat
620342Rph3alrabphilin 3A-like (without C2 domains)106068994360833354Rat
7563404LOC102549419uncharacterized LOC102549419106075632960769231Rat
41227580LOC120095141uncharacterized LOC120095141106083449260848996Rat
1565611Liat1ligand of ATE1106087252960876191Rat
1359691Rflnbrefilin B106089369360899970Rat
40932371LOC120095142uncharacterized LOC120095142106090961660916891Rat
1311391Vps53VPS53 subunit of GARP complex106091982061038674Rat
621204Rpl37l1ribosomal protein L37-like 1106103379961034157Rat
9245120LOC103693391uncharacterized LOC103693391106103870061042736Rat
1307493Tlcd3aTLC domain containing 3A106105747061065293Rat
1563715Gemin4gem (nuclear organelle) associated protein 4106106242061073529Rat
68360Dbil5diazepam binding inhibitor-like 5106107353861074550Rat
1307010Glod4glyoxalase domain containing 4106107753561095876Rat
1309077Mrm3mitochondrial rRNA methyltransferase 3106109592061125421Rat
1310489Nxnnucleoredoxin106110932261247578Rat
40965708LOC120095143uncharacterized LOC120095143106121550461216329Rat
68406Timm22translocase of inner mitochondrial membrane 22106125345961261217Rat
1306279AbrABR activator of RhoGEF and GTPase106126251661461331Rat
41243156Trnaa-ugc11transfer RNA alanine (anticodon UGC) 11106130809861308179Rat
41339704LOC120095144uncharacterized LOC120095144106146150261478891Rat
1311234Bhlha9basic helix-loop-helix family, member a9106151360961514730Rat
1307639Trarg1trafficking regulator of GLUT4 (SLC2A4) 1106152110761541494Rat
71093Gosr1golgi SNAP receptor complex member 1106157049961607287Rat
41068944Hmgn1-ps5high mobility group nucleosome binding domain 1, pseudogene 5106158043761594037Rat
2393Cpdcarboxypeptidase D106162352861687491Rat
1587322Rps15-ps10ribosomal protein S15, pseudogene 10106169268061693155Rat
11488308LOC108352222uncharacterized LOC108352222106170324561717561Rat
41115213LOC120095360U6 spliceosomal RNA106170797061708076Rat
1307444Tmigd1transmembrane and immunoglobulin domain containing 1106173907161751025Rat
41381218LOC120095329uncharacterized LOC120095329106175695061760551Rat
1304668Blmhbleomycin hydrolase106177211261815212Rat
3714Slc6a4solute carrier family 6 member 4106182420861858924Rat
1309863Nsrp1nuclear speckle splicing regulatory protein 1106188080761914471Rat
2325359Mir423microRNA 423106191414261914220Rat
1309650Efcab5EF-hand calcium binding domain 5106192641962042745Rat
1309389Ssh2slingshot protein phosphatase 2106205740062309328Rat
708560Coro6coronin 6106231155262319659Rat
1564005Ankrd13bankyrin repeat domain 13B106231966062338342Rat
41092415LOC120095265uncharacterized LOC120095265106233527662340146Rat
69331Git1GIT ArfGAP 1106234208262356379Rat
1559818Tp53i13tumor protein p53 inducible protein 13106235672262363122Rat
1304598Abhd15abhydrolase domain containing 15106236320962368600Rat
708455Taok1TAO kinase 1106237307262465295Rat
41233495LOC120095266cytochrome c oxidase subunit 7C, mitochondrial-like106252904062529853Rat
40941456LOC120095450small nucleolar RNA SNORA17106254858762548718Rat
9158343LOC10369344160S ribosomal protein L27a pseudogene106255924362559753Rat
1596719Nufip2nuclear FMR1 interacting protein 2106257492262607729Rat
2415Cryba1crystallin, beta A1106260837362614726Rat
6502209Bola2-ps5bolA family member 2, pseudogene 5106262745862632944Rat
1562698Myo18amyosin XVIIIa106265421862755465Rat
7573752LOC102557169uncharacterized LOC102557169106273844962740315Rat
1311347Pipoxpipecolic acid and sarcosine oxidase106276987462783484Rat
7519974LOC102551552uncharacterized LOC102551552106278035562783832Rat
619780Sez6seizure related 6 homolog106281893162868686Rat
1305731Phf12PHD finger protein 12106287130962919026Rat
1305508Dhrs13dehydrogenase/reductase 13106292079162925952Rat
70993Flot2flotillin 2106292604762947759Rat
2325428Mir144microRNA 144106296134862961430Rat
2325534Mir451amicroRNA 451a106296152062961591Rat
1304714Eral1Era-like 12S mitochondrial rRNA chaperone 1106296172562968747Rat
1566149Fam222bfamily with sequence similarity 222, member B106298657163052350Rat
1306708Traf4Tnf receptor associated factor 4106305416963060284Rat
1306897Nek8NIMA-related kinase 8106306086863073546Rat
1359195Tlcd1TLC domain containing 1106307446963076502Rat
1304897Rpl23aribosomal protein L23A106307666063079346Rat
41313827Snord42asmall nucleolar RNA, C/D box 42A106307703063077094Rat
40960684Snord4asmall nucleolar RNA, C/D box 4A106307741963077489Rat
41015986Snord42bsmall nucleolar RNA, C/D box 42B106307882563078893Rat
1305058Rab34RAB34, member RAS oncogene family106308331963087538Rat
1561727Proca1protein interacting with cyclin A1106309001863102941Rat
1309290Supt6hSPT6 homolog, histone chaperone and transcription elongation factor106310392063140780Rat
1307274Sdf2stromal cell derived factor 2106314056363151038Rat
1307929Bltp2bridge-like lipid transfer protein family member 2106315599963185213Rat
41054253LOC120095505U6 spliceosomal RNA106318020463180310Rat
41213076LOC120095269uncharacterized LOC120095269106318112363182585Rat
1596488Rskrribosomal protein S6 kinase related106318528663191963Rat
7644068Rpl37a-ps13ribosomal protein L37A, pseudogene 13106319123863195267Rat
620152Spag5sperm associated antigen 5106319871763216746Rat
2091Aldocaldolase, fructose-bisphosphate C106321747763221066Rat
1359436Pigsphosphatidylinositol glycan anchor biosynthesis, class S106322261163237190Rat
3942Unc119unc-119 lipid binding chaperone106323786263243339Rat
3970Foxn1forkhead box N1106325140063273710Rat
41125022Rps2-ps18ribosomal protein S2, pseudogene 18106328210363283054Rat
61920Slc13a2solute carrier family 13 member 2106329181363319127Rat
1309472Slc46a1solute carrier family 46 member 1106336150463367940Rat
1310078Sarm1sterile alpha and TIR motif containing 1106336945663393016Rat
3967Vtnvitronectin106339473263397812Rat
62077SeboxSEBOX homeobox106339921563400086Rat
1566425Tmem199transmembrane protein 199106340249363407065Rat
1307022Poldip2DNA polymerase delta interacting protein 2106340723763417605Rat
3877Tnfaip1TNF alpha induced protein 1106341777463432466Rat
1309400Ift20intraflagellar transport 20106343259763438125Rat
1307423Tmem97transmembrane protein 97106343822863447311Rat
41101894LOC120095392small nucleolar RNA SNORA70106346016863460267Rat
1561602Nlknemo like kinase106346738863590960Rat
1305651Ccnqcyclin Q106364653263647695Rat
41098513Lyrm9l1LYR motif containing 9 like 1106372477063727454Rat
1562012Lyrm9LYR motif containing 9106372571863739772Rat
41332534LOC120095150uncharacterized LOC120095150106377186163781394Rat
1593783Nsmce2-ps2NSE2/MMS21 homolog, SMC5-SMC6 complex SUMO ligase, pseudogene 2106378607563790665Rat
3185Nos2nitric oxide synthase 2106381530863851208Rat
10411933LOC106736471antisense transcript of iNOS gene106385062063851191Rat
3004Lgals5galectin 5106385394963857198Rat
2323679Nos2-ps1nitric oxide synthase 2, pseudogene 1106388755263905593Rat
3005Lgals9galectin 9106390701863930224Rat
1308105Ksr1kinase suppressor of ras 1106396177164098076Rat
1565317Faul2FAU ubiquitin like and ribosomal protein S30 fusion like 2106412475964125452Rat
1307835Wsb1WD repeat and SOCS box-containing 1106420276164219039Rat
41124032LOC120095152uncharacterized LOC120095152106424612364253097Rat
7668412LOC102552371uncharacterized LOC102552371106426819464271560Rat
3168Nf1neurofibromin 1106430602764539112Rat
1359125Omgoligodendrocyte-myelin glycoprotein106446135064464084Rat
6495961Evi2becotropic viral integration site 2B106447269364474311Rat
1593824Evi2aecotropic viral integration site 2A106448576064489660Rat
1305063Rab11fip4RAB11 family interacting protein 4106455010964658123Rat
41184270LOC120095372U6 spliceosomal RNA106455393264554035Rat
40966030LOC120095373U6 spliceosomal RNA106459496064595066Rat
41307510LOC120095366U6 spliceosomal RNA106459891864599020Rat
7592181LOC102550168uncharacterized LOC102550168106466391964665250Rat
11468471Trnat-cgu1transfer RNA threonine (anticodon CGU) 1106466534664665417Rat
4888546Mir193amicroRNA 193a106467234364672454Rat
2325379Mir193microRNA 193106467235464672439Rat
2325371Mir365bmicroRNA 365b106468625564686340Rat
7516121LOC102550051uncharacterized LOC102550051106471663564738279Rat
1587323Stmnl-ps1stathmin like, pseudogene 1106485711864857745Rat
1593257Krt18-ps1keratin 18, pseudogene 1106487762364880512Rat
1311017Utp6UTP6 small subunit processome component106489732164927997Rat
41337556LOC12009527060S ribosomal protein L12-like106494388064944475Rat
9259038Rpl12-ps8ribosomal protein L12, pseudogene 8106495466764955263Rat
1593621Suz12SUZ12 polycomb repressive complex 2 subunit106496703565012916Rat
621517Crlf3cytokine receptor-like factor 3106502422865060746Rat
7655392Rpl12-ps6ribosomal protein L12, pseudogene 6106503209765033557Rat
1561464Atad5ATPase family, AAA domain containing 5106507068265118489Rat
1306595Tefmtranscription elongation factor, mitochondrial106511965765124233Rat
7558326Pgam1-ps3phosphoglycerate mutase 1, pseudogene 3106512448665130349Rat
41337742LOC120095424small nucleolar RNA SNORA43106513290865133055Rat
1586597Nme1-ps3NME/NM23 nucleoside diphosphate kinase 1, pseudogene 3106513688465137365Rat
708487Adap2ArfGAP with dual PH domains 2106513800665166147Rat
41310478Trnaa-cgctransfer RNA alanine (anticodon CGC)106516743865167510Rat
1305252Rnf135ring finger protein 135106517056065189791Rat
1307023Rhot1ras homolog family member T1106519870065262807Rat
1311901Rhbdl3rhomboid like 3106529925065354099Rat
1310429C10h17orf75similar to human chromosome 17 open reading frame 75106536092465373864Rat
2325479Mir632microRNA 632106538575765385834Rat
1308121Zfp207zinc finger protein 207106538580765398086Rat
1306450Psmd11proteasome 26S subunit, non-ATPase 11106543385365479774Rat
11402473Cdk5r1lcyclin-dependent kinase 5 regulatory subunit 1 like106548376565484289Rat
629472Cdk5r1cyclin-dependent kinase 5 regulatory subunit 1106548426665485467Rat
621321Myo1dmyosin ID106548915365765812Rat
41265281LOC120095458small nucleolar RNA SNORA26106563109465631189Rat
1359736Tmem98transmembrane protein 98106579617365807082Rat
1306684Spaca3sperm acrosome associated 3106585061865858090Rat
2017Asic2acid sensing ion channel subunit 2106587059266940577Rat
40986121Rangrf-ps1RAN guanine nucleotide release factor, pseudogene 1106615533966178353Rat
11437457Rpl35al3ribosomal protein L35A like 3106621006366210640Rat
41059526LOC120095274uncharacterized LOC120095274106629879266399056Rat
1560058Phb1-ps1prohibitin 1, pseudogene 1106654646966547373Rat
7489011Mir6327microRNA 6327106659835166598483Rat
40996120Gapdh-ps43Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 43106680369166804868Rat
41188203LOC120095275uncharacterized LOC120095275106689240166906045Rat
11435226LOC108352208uncharacterized LOC108352208106694046266956291Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10141D10Wox15254106322103763221291Ratregion
10142D10Arb9129106322109463221223Ratregion
10195D10Wox14158105477580754775965Ratregion
10196D10Mgh22270105477574554776015Ratregion
10664D10Uwm1158105467188954672047Ratregion
10995D10Wox24138106381361463813752Ratregion
33846D10Mit2188106364253963642727Ratregion
34320D10Mgh7215105409867454098889Ratregion
34445D10Mgh6137106134527661345413Ratregion
34648D10Mgh14115106415546964155584Ratregion
11288D10Wox1295105433337554333470Ratregion
11479D10Mit8109105379738553797494Ratregion
36087D10Rat156171105480929254809463Ratregion
36233D10Rat60161105505021355050374Ratregion
37502D10Rat70127106674930266749441Ratregion
37564D10Rat77212105477429154774503Ratregion
36842DXRat1224105516225055162474Ratregion
37084D10Rat28287106672620766726496Ratregion
37676D10Rat68195106337737563377570Ratregion
37720D10Rat80145105937813559378278Ratregion
36713D10Rat61259105481004554810306Ratregion
35108D10Rat30166106260203062602196Ratregion
39588D1Rat297247105645849456458731Ratregion
39762D10Rat160205105678659656786787Ratregion
39954D10Rat195211106254189062542101Ratregion
40564D10Rat211146106214541062145556Ratregion
38936D10Rat98227106694158666941813Ratregion
38986D10Rat69210106325120763251419Ratregion
39474D10Rat161179106190123161901410Ratregion
41939D10Arb27125106592723365927370Ratregion
41943D10Arb6223105477579154776014Ratregion
41945D10Arb7301105379725053797551Ratregion
41947D10Arb8244105433337654333620Ratregion
41254D10Rat159176106067708660677262Ratregion
41468D10Rat155173106697895566979128Ratregion
42921D10Rat243224106124830361248527Ratregion
42922D10Rat240137106623817666238315Ratregion
42923D10Rat241222105770518957705411Ratregion
42925D10Rat242144106185230961852455Ratregion
42926D10Rat210160106682418566824357Ratregion
42370D10Rat238142106022231060222446Ratregion
41092D10Rat158200105587313655873336Ratregion
44750D10Got78181106218533062185511Ratregion
44752D10Got80194106445792364458117Ratregion
44756D10Got79127106098832160988448Ratregion
44757D10Got83157106094340860943565Ratregion
44758D10Got84122106674876866748890Ratregion
625803D10Got82170106476696264767132Ratregion
1303357D10Got165141105554920155549342Ratregion
1303359D10Got166232105844562058445852Ratregion
66409D10Mco42330106381339563813732Ratregion
66490D10Mco60223105709616957096392Ratregion
66491D10Mco61209106481640264816611Ratregion
66522D10Mco72236106443276764433003Ratregion
66552D10Mco1193106674365566743848Ratregion
66717D10Mco16186106412650664126700Ratregion
67320D10Arb17282106415544064155722Ratregion
1630720D10Got240204105665179656652002Ratregion
1630732D10Got227178105973294559733123Ratregion
1630760D10Wox40152105467185154672003Ratregion
1631253D10Wox42181105527369655273877Ratregion
1632328D10Got235147105667916656679313Ratregion
1632419D10Got233148105693451156934659Ratregion
1578872D10Chm127220106619553466195752Ratregion
1578899D10Chm228239106619940566199644Ratregion
1578974D10Chm62229105792586457926093Ratregion
1578987D10Chm229232106631944766319679Ratregion
1579009D10Chm125243106578677065787013Ratregion
1579090D10Chm226245106583287365833120Ratregion
1579129D10Chm126227106617830066178527Ratregion
1579191D10Chm227175106598362465983799Ratregion
1627580D10M11Mit22387105633937956339466Ratregion
1639492D10Got406213106513903865139251Ratregion
1641292D10Got414200105632532056325520Ratregion
1641402D10Got412234105948803159488265Ratregion
1641744D10Wox3987105467318154673268Ratregion
1633363D10Got214120105496930154969421Ratregion
1640581D10Got409178105718296457183138Ratregion
1635815D10M11Nds199105973300459733103Ratregion
1637431D10M11Mit224131105451425854514389Ratregion
1637892D10Got236138105786391957864057Ratregion
1638078D10Got210231105801050258010733Ratregion
1638078D10Got210231105828865758288866Ratregion
1634094D10Got247251105598916055989413Ratregion
1634752D10Wox41308105527333855273646Ratregion
7205908UniSTS:4934301243106303910863040351Ratregion
7206026Olfr399549105896739758967946Ratregion
7193134Efnb3563105427714354277706Ratregion
7193015Efnb3689105427663654277325Ratregion
7193052D85391134106162359761623731Ratregion
7206434Bhlha9865106151353161514395Ratregion
5035921PMC310661P1249106062116360621412Ratregion
5038694BE200478109106540534565405454Ratregion
5038740RH127305211105495503554955246Ratregion
5036143D11Bhm10689106440453964404628Ratregion
5036145D11Bhm13693106679308166793174Ratregion
5036147D11Bhm16374106382850363828577Ratregion
5036149D11Bhm34124106111290661113030Ratregion
5036151D11Bhm45103106287341562873518Ratregion
5036153D11Bhm6385106350115563501240Ratregion
5036155D11Bhm872105971991359719986Ratregion
5036163D11Seg19137106325547963255615Ratregion
5036165D11Seg28131106335964163359772Ratregion
5036167D11Seg36114106342047163420585Ratregion
7206410mMECIR544608105434594854346556Ratregion
7206548UniSTS:5470341463105535784955359312Ratregion
7206566UniSTS:5470750105466620454667679Ratregion
7206580UniSTS:5471661396106305471663056112Ratregion
5039202RH127571183106324311863243301Ratregion
5036426Nf1141106451907764519218Ratregion
5036589AU048526192106220238562202577Ratregion
5036797AU049236272106013382360134097Ratregion
5036899AU049558292106669077466691066Ratregion
5035606STS-H01467131106162006961620200Ratregion
5031290PMC126639P1176105785541057855586Ratregion
7206182Dvl21487105473114154732628Ratregion
7206202Ybx21344105466384254665188Ratregion
5034053RH141184218105506054155060759Ratregion
5034059RH141206217106162016661620383Ratregion
5034087RH141316204106502378565023989Ratregion
5028891RH142717281106447379464474075Ratregion
5034227RH141847216105750747757507693Ratregion
5026324RH131773184105566736555667549Ratregion
5028993RH143106121105976962859769749Ratregion
5029153RH143717107106098756960987676Ratregion
5031966AU046536188105472739454727582Ratregion
5034786AI011333137106334712263347259Ratregion
5034816AI013013115106305067063050785Ratregion
5026792RH133546436105537544055375876Ratregion
5026910RH134006217106106253661062753Ratregion
5027066D17S2042211105730835657308567Ratregion
5027425AI50595383105463989754639980Ratregion
5032719RH135050216106340036163400577Ratregion
5032743RH135138206105544377455443980Ratregion
5027427AI84833292105667501756675109Ratregion
5027431AW491894129106448666064486790Ratregion
5032899RH136896210106230899862309208Ratregion
5033009RH137267198106001280960013007Ratregion
5025088BB241108138106325189763252035Ratregion
5033185RH137897163106337087463371037Ratregion
5025272RH127682219106237705662377275Ratregion
5033345RH138491245106181437161814616Ratregion
5028011M84373189106385081763851006Ratregion
5028011M84373189106385081763851006Ratregion
5028011M84373189106390395463904143Ratregion
5028109Z19599172106062168760621859Ratregion
5028139D11Mit364112105685863456858746Ratregion
5028143D11Mit68.1138106679359966793737Ratregion
5030771AW535144214106538508965385303Ratregion
5025706RH129345470105509481655095286Ratregion
5025712RH129368201105953102559531226Ratregion
5028334STS-N93513226105437068854370914Ratregion
5030979BE108709150106595943665959586Ratregion
5033779RH140090216105567141655671632Ratregion
5033817RH140231218106049647760496695Ratregion
5025778RH129630203105516672455166927Ratregion
5028527AU042359112106126271961262832Ratregion
5056331RH144317120106158246061582580Ratregion
5056387RH144349143106058847060588613Ratregion
5051505AW124583147106231966862319815Ratregion
5051507AI847581107106535386565353972Ratregion
5053937RH142937137106497548764975624Ratregion
5051963RH94760173106062167460621847Ratregion
5054237RH143109257106142301461423271Ratregion
5057442BG375498129106065120560651334Ratregion
5055243RH143689125106409770964097834Ratregion
5055281RH143711122106260504662605168Ratregion
5059418AW530666161106278359662783757Ratregion
5059418AW530666161106278359662783980Ratregion
5055567RH143875101105969344159693542Ratregion
5057938BF392929139106643294366433082Ratregion
5057994BF386417157106550292465503081Ratregion
5058832BF387133166106013474460134910Ratregion
5058068BF386532162106354350563543667Ratregion
5058186BF386775150105976686259767012Ratregion
5056785RH144579199106209042962090628Ratregion
5052689RH142209188106381307263813260Ratregion
5052709RH142224107106185828361858390Ratregion
5059710BE097677139106183900661839145Ratregion
5055579RH143882128106690756366907691Ratregion
5059886AI072008201106535377365353974Ratregion
5049928RH133762811105566800055668811Ratregion
5053239RH142534253106507576365076016Ratregion
5058478BE096286239106321927563219514Ratregion
5050230RH133936206106497292364973128Ratregion
5050394RH134031215105537728255377495Ratregion
5057566AI548110157106292579162925948Ratregion
5050538RH134114219106341680363417022Ratregion
5053575RH142728241106364667463646915Ratregion
5049888RH133740203105665573456655937Ratregion
5052553X0087678105431136354311441Ratregion
5052609RH1259230105464012654640356Ratregion
5052657RH142190151106162356761623718Ratregion
5052683RH142205160106443299264433152Ratregion
5050406RH134038213106231931662319529Ratregion
5050554RH134123184106107766561077849Ratregion
5050658RH134183184106374608363746267Ratregion
5050768RH134247180105953417859534358Ratregion
5051503AV32860897105536477955364876Ratregion
5051773RH94650102106260839662608498Ratregion
5054735RH143395129106442728264427411Ratregion
5050980RH134369194105776381957764013Ratregion
5051054RH134412192106157069461570886Ratregion
5041600RH128950162105439078454390946Ratregion
5040914RH128556217106548930265489519Ratregion
5044522RH130652196106385406363854260Ratregion
5044522RH130652196106390714963907345Ratregion
5044932RH130886201105953483559535036Ratregion
5041418RH128845180106343791163438091Ratregion
5045926RH131458193105763270157632894Ratregion
5046220RH131627188105472254554722733Ratregion
5041692RH129003193106315078663150979Ratregion
5041842RH129090204106002809660028300Ratregion
5044656RH130729185106027251960272704Ratregion
5048812RH133119208105411044254110650Ratregion
5046280RH131662180106069004060690220Ratregion
5045356RH131131195105382394953824144Ratregion
5046588RH131840201106526246065262661Ratregion
5047556RH132395208106030942160309629Ratregion
5046204RH131618192106441940464419596Ratregion
5048872RH133154180106310395363104133Ratregion
5048986RH133220218106336744863367666Ratregion
5049154RH133316189105738368257383871Ratregion
5046672RH131888188105566525655665444Ratregion
5047886RH132585211106336662763366838Ratregion
5049136RH133306192106516685665167048Ratregion
5046826RH131977210106036408660364296Ratregion
5048070RH132691186105540201555402201Ratregion
5046964RH132056197105572785455728051Ratregion
5048180RH132754207106162106761621274Ratregion
5048326RH132839161106385097463851135Ratregion
5048326RH132839161106390411163904274Ratregion
5048326RH132839161106390411163904274Ratregion
5049674RH133616208106000541160005619Ratregion
5049684RH133622219105667411256674331Ratregion
5047120RH132145184106011657160116755Ratregion
5042244RH129323219106323692863237147Ratregion
5039798RH127913198106237334262373540Ratregion
5039910RH127978461106025037260250833Ratregion
5042550RH129502207105411950154119708Ratregion
5048512RH132946191106014701860147209Ratregion
5049542RH133541180106110237261102552Ratregion
5039426RH127699219106055546360555682Ratregion
5039480RH127729184106275522362755407Ratregion
5042070RH129221169105569995755700126Ratregion
5040300RH128204216105431106654311282Ratregion
5042964RH129750210106055642860556638Ratregion
5039902RH127973205105787614557876350Ratregion
5042544RH129498187105570003755700224Ratregion
5040828RH128507188106052038060520568Ratregion
5040930RH128565211106062167460621885Ratregion
5043426RH130019186106233992162340107Ratregion
5039982RH128020399105570016155700560Ratregion
7192241D10Wox3988105467318154673269Ratregion
5040298RH128203208106305427163054479Ratregion
5042592RH129528219106547949065479709Ratregion
5042734RH129614206106052051560520721Ratregion
5040444RH128287190106235615862356348Ratregion
5043042RH129795153106308736363087516Ratregion
5043086RH129824183106062207860622261Ratregion
5041502RH128893187105667487656675063Ratregion
5072526RH136900160106445676964456929Ratregion
5072618RH136954191106447279464472985Ratregion
5075252RH138487120106294298362943103Ratregion
5075460RH138606228106530139365301621Ratregion
5072364RH136806164106188094161881105Ratregion
5074150RH137850233106275933662759569Ratregion
5074328RH137953181106465438364654564Ratregion
5074340RH137960157106287117562871332Ratregion
5074394RH137992211105574877255748983Ratregion
5074412RH138002171106512667165126842Ratregion
5076146RH139006161105570688155707042Ratregion
5076960RH139478201106260556962605770Ratregion
5075038RH138363186105927476259274948Ratregion
5077088RH139553722106042008560420807Ratregion
5077318RH139687198105787958257879780Ratregion
5077322RH139690183106041659060416773Ratregion
5079370RH140957187106511990165120088Ratregion
5076758RH13936191106110934461109435Ratregion
5076254RH139069175105567285055673025Ratregion
5079556RH141066191106340913863409329Ratregion
5077278RH139664201106175066361750864Ratregion
5076538RH139234224106441423564414459Ratregion
5079992RH141320196105968674859686944Ratregion
5080064RH141362216105570595855706174Ratregion
5080186RH141434183105493426654934449Ratregion
5073042RH137201205105780158257801787Ratregion
5080246RH141469190106126019261260382Ratregion
5071132RH134905199106107429861074497Ratregion
5078886RH140608210105409956854099778Ratregion
5073518RH137482181105670885856709039Ratregion
5073578RH137517120105535776955357889Ratregion
5073704RH137590191105548635155486542Ratregion
5073826RH137661126105950123359501359Ratregion
5070684RH134645220105784173657841956Ratregion
5072868RH137101195106047315660473351Ratregion
5070910RH134776197106062169960621896Ratregion
5070942RH134795181106002518360025364Ratregion
5073410RH137420206105683704056837246Ratregion
5072012RH135414184105660359956603783Ratregion
5071636RH135197218105574687555747093Ratregion
5071834RH135311195105721091057211105Ratregion
5063392BE107606195106511368065113875Ratregion
5063418BE107661156105746098157461137Ratregion
5065024BE108934161106644299066443151Ratregion
5067104AU047962237106281969562819932Ratregion
5067342AU047812251106079542160795672Ratregion
5068224AU047274134106662081966620953Ratregion
5069973RH94394118106055328560553403Ratregion
5070041RH94434197106453628764536484Ratregion
5068950AU046822135106149165461491884Ratregion
5068950AU046822135106149174961491884Ratregion
5070271RH9457196106385073363850828Ratregion
5070271RH9457196106385073363850828Ratregion
5070271RH9457196106390386963903965Ratregion
5070271RH9457196106390386963903965Ratregion
5070538RH134559203106089155860891761Ratregion
5069306AU04658596106087032260870418Ratregion
5060056BI279325206106448605964486265Ratregion
5060082BF388451244106099338360993627Ratregion
5060390BI292081197106574083965741036Ratregion
5065564BE115893154106160561661605772Ratregion
5060828AI145271185106329210963292294Ratregion
5062792AW534454164106267898862679152Ratregion
5064138BI296210219106426827764268496Ratregion
5064168BE120708197106163872061638917Ratregion
5064406BI302108169106445122364451392Ratregion
5061848AW533877167106466458464664750Ratregion
5061964AW527866422106543415965434581Ratregion
5062012BI288141166106208873462088900Ratregion
5062122BE106231220106615216666152386Ratregion
5064120AA956238154106339765163397805Ratregion
5060824BE104553152106128760461287756Ratregion
5060930BE104801214106187940761879621Ratregion
5066044BI304152150106159809561598245Ratregion
5066260PMC126639P2299105506089455061193Ratregion
5063032BF398270195106501048565010680Ratregion
5064684BE108317155106233393262334087Ratregion
5064782BF399703206106227583062276036Ratregion
5066356PMC16295P1262105787615657876418Ratregion
5066438AU048356163106195407361954236Ratregion
5066568AU048280188105516087655161064Ratregion
5084162AA89381792106301433963014431Ratregion
5084196AI176383234106260120462601439Ratregion
5082257BE119054202106637650366376705Ratregion
5087538PMC30213P1660106548480865485468Ratregion
5082333BI27451095106572392765724022Ratregion
5087773D11Seg31318106338355563383873Ratregion
5088102Slc2a4131105466618454666315Ratregion
5087414CRK319106054141360541732Ratregion
5087918Foxn1168106326475863264926Ratregion
5083081BF390779155106098237360982528Ratregion
5089379AU049121285106598278465983069Ratregion
5089471AU049175281106377807963778360Ratregion
5090811AU049977264106329950263299766Ratregion
5083661BG381406211106310429363104504Ratregion
5089625AU049266133105634772556347858Ratregion
5084226AA848827181106444372364443904Ratregion
5084682AI170602179106236700262367181Ratregion
5081899BF415277141106075178060751921Ratregion
5081941BF415384135105925628659256421Ratregion
5087680Abr166106126255861262725Ratregion
5087737Cfl1874105467530054676175Ratregion
5087759D11Bhm13762106684859566848657Ratregion
5087761D11Bhm1485105987373359873818Ratregion
5087765D11Bhm36161106114648461146645Ratregion
5087767D11Bhm84184106391183963912024Ratregion
5087775D11Seg37101106344021663440317Ratregion
5082273BE119095161106047575160475912Ratregion
5082357BE119243182105968626559686447Ratregion
5088511AU048613259106364243763642696Ratregion
5080746RH141758181106015275460152935Ratregion
5090233AU049629282105602237856022660Ratregion
5080888RH141841199106216117062161369Ratregion
5083007BF390612185106539598565396170Ratregion
5084782AI172099216106340258863402804Ratregion
5081422AI511473219106049555760495775Ratregion
5083397BF391060180106448449564484675Ratregion
5083631BE100929150106001926660019416Ratregion
5081863BE118579183106230784962308032Ratregion
5081949BE118869152106115688261157034Ratregion
5085754BM383586150106517888465179034Ratregion
5503140PRPF883106035148060352626Ratregion
5503160ZNF207-1144106539635865397079Ratregion
5503176ksks290457105972682359727280Ratregion
5503182ksks303396106311016163110557Ratregion
5503252UniSTS:237527209105774834357748553Ratregion
5503178ksks304342106310485763105199Ratregion
5503730GIT1_9564577106235575362356330Ratregion
5504089Fgf11471105451864754519118Ratregion
5503617UniSTS:4653811623105469037154691994Ratregion
5504328D17S1484E670106317920663179876Ratregion
5504330D17S1500E764106539622165396985Ratregion
5504628PMC316663P6113105430861154308724Ratregion
5504634PMC316856P2165105430844854308614Ratregion
5504696PMC56944P1667105446790154468568Ratregion
5504344D11S31591483106107079761072280Ratregion
5504833ha22370106640168766402215Ratregion
5505122Chd3802105406374454064546Ratregion
5505212Serpinf2362106027750460277866Ratregion
5504528PMC27130P2236105438261654382852Ratregion
5505638UniSTS:4878580106304015363040351Ratregion
5505831Omg239106446175564461994Ratregion
5506197UniSTS:498767262105433552054335782Ratregion
5507067UniSTS:224312113105471765354717766Ratregion
5507079UniSTS:224404144105475026554750409Ratregion
5499541G54872248106001554160015789Ratregion
5499685G73120422105683891456839336Ratregion
5500087UniSTS:236646105106177261061772715Ratregion
5500079UniSTS:236635168105953016859530336Ratregion
5499569AI551877135106069065760690792Ratregion
5500282D17S178385105454350554543590Ratregion
5500081UniSTS:236639252105971375459714006Ratregion
5500085UniSTS:236667204106501244665012650Ratregion
5500220AI42767998105705457857054676Ratregion
5502337RH124536258106291860762918865Ratregion
5502953Sgsm2621105972302959723650Ratregion
5500555RH135952645106500820865008853Ratregion
5500621RH136313187105706696457067151Ratregion
5500631RH136392235106237702862377263Ratregion
5500326GDB:190076386105430881454309200Ratregion
5500394GDB:4340120106262800362628052Ratregion
5500394GDB:4340120106262804962628128Ratregion
5500601RH136114199106340687163407070Ratregion
5500651RH136477194105536461555364810Ratregion
5503488DVL2__3968849105473192354732772Ratregion
5500887G09516148105532024555320393Ratregion
5501103PMC136595P10105438205754382917Ratregion
5501718Efnb3924105427488454275808Ratregion
5501932MARC_17513-17514:1016473117:11431106539381765395248Ratregion
5502024MARC_24051-24052:1030022421:1727106310531263106039Ratregion
5505394Hes7784105382719253827976Ratregion
5505738UniSTS:491989366105455901554560083Ratregion
5506604CDK5R1_1797832106548462765485459Ratregion
5501806MARC_13669-13670:1002900020:1674106291378662914460Ratregion
5502054MARC_26164-26165:1030455897:1760106396924163970001Ratregion
5502391RH124699145106001451860014663Ratregion
152025222rs1072766510105640910856409108Ratregion
Position Markers

Flank 1: (D10Mit8)
Rat AssemblyChrPosition (strand)Source
GRCr81054,296,227 - 54,296,336 (+)Marker Load Pipeline
mRatBN7.21053,797,385 - 53,797,494 (+)MAPPER
Rnor_6.01055,678,976 - 55,679,084NCBI
Rnor_5.01055,422,036 - 55,422,144UniSTS
RGSC_v3.41055,851,702 - 55,851,811RGD
RGSC_v3.41055,851,703 - 55,851,811UniSTS
RGSC_v3.11055,865,325 - 55,865,434RGD
Celera1052,962,925 - 52,963,033UniSTS
SHRSP x BN Map1046.5699UniSTS
SHRSP x BN Map1046.5699RGD
Cytogenetic Map10q24UniSTS
Peak: (D10Got236)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21057,863,919 - 57,864,057 (+)MAPPER
Rnor_6.01059,811,617 - 59,811,754NCBI
Rnor_5.01059,550,850 - 59,550,987UniSTS
RGSC_v3.41060,122,093 - 60,122,230UniSTS
Cytogenetic Map10q24UniSTS
Flank 2: (D10Rat155)
Rat AssemblyChrPosition (strand)Source
GRCr81067,476,608 - 67,476,781 (+)Marker Load Pipeline
mRatBN7.21066,978,955 - 66,979,128 (+)MAPPER
Rnor_6.01069,385,595 - 69,385,767NCBI
Rnor_5.01069,020,437 - 69,020,609UniSTS
RGSC_v3.41070,229,781 - 70,229,954RGD
RGSC_v3.41070,229,782 - 70,229,954UniSTS
RGSC_v3.11070,243,404 - 70,243,577RGD
Celera1065,926,485 - 65,926,657UniSTS
RH 2.0 Map10667.6RGD
SHRSP x BN Map1047.6399RGD


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
61441Btemp1Thermal response to stress QTL 14body temperature trait (VT:0005535)core body temperature (CMO:0001036)103539245763642539Rat
1549846Scl47Serum cholesterol level QTL 473.6blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)105057470795574707Rat
9589136Insul27Insulin level QTL 2710.460.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)101147401056474010Rat
1578779Tcas10Tongue tumor susceptibility QTL 103.12tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)103129743976297439Rat
631565Hcuc4Hepatic copper content QTL 44.15liver copper amount (VT:0003065)liver copper weight to liver dry weight ratio (CMO:0001512)106694181373452992Rat
631564Apr3Acute phase response QTL 33.9blood interleukin-6 amount (VT:0008595)plasma interleukin-6 level (CMO:0001927)101527595560275955Rat
631552Vetf2Vascular elastic tissue fragility QTL 24.50.0002aorta elastic tissue integrity trait (VT:0010556)artery internal elastic lamina non-tumorous lesion count (CMO:0001913)104114263386142633Rat
61449Ciaa2CIA Autoantibody QTL 27.1blood autoantibody amount (VT:0003725)calculated serum anti-type 2 collagen antibody titer (CMO:0001279)1063221094107211142Rat
631554Bp133Blood pressure QTL 1330.005arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1074336463851208Rat
631557Bp136Blood pressure QTL 1360.003arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)103063205375632053Rat
1549831Bss6Bone structure and strength QTL 64lumbar vertebra strength trait (VT:0010574)vertebra ultimate force (CMO:0001678)1057576521102576521Rat
1578762Toxo1Toxoplasma gondii resistance QTL 1brain integrity trait (VT:0010579)percentage of study population displaying Toxoplasma gondii brain cysts at a point in time (CMO:0002028)105220003059378278Rat
70164Bw21Body weight QTL 214.360.00005body mass (VT:0001259)body weight (CMO:0000012)105379749498952626Rat
61463Bp12Blood pressure QTL 126.30.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)104133325886333258Rat
8694173Bw149Body weight QTL 1494.380.001body mass (VT:0001259)body weight gain (CMO:0000420)104444169989441699Rat
2300218Hpcl2Hepatic cholesterol level QTL 2liver cholesterol amount (VT:0010498)liver cholesterol level (CMO:0001597)104502965095600334Rat
70171Cari1Carrageenan-induced inflammation QTL 14.90.0005hypodermis integrity trait (VT:0010550)inflammatory exudate volume (CMO:0001429)1053797385107211142Rat
724527Bp148Blood pressure QTL 1480.0001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)102845313673453136Rat
1358897Stresp6Stress response QTL 64.170.022blood norepinephrine amount (VT:0005663)plasma norepinephrine level (CMO:0001010)103539226764155584Rat
1331762Rf40Renal function QTL 403.873kidney blood vessel physiology trait (VT:0100012)absolute change in renal vascular resistance (CMO:0001900)102929950464155584Rat
2300171Bmd58Bone mineral density QTL 584.90.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)102694462871944628Rat
2301967Cm73Cardiac mass QTL 734.55heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)101448701189062041Rat
70188BpQTLcluster1Blood pressure QTL cluster 14.864arterial blood pressure trait (VT:2000000)pulse pressure (CMO:0000292)14232313287323132Rat
12880372Am12Aortic mass QTL 120.003aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)106631944768164786Rat
12880375Kidm66Kidney mass QTL 660.009kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)106631944768164786Rat
1357344Bp249Blood pressure QTL 2490.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)106674365598003205Rat
12880370Cm105Cardiac mass QTL 1050.008heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)106631944768164786Rat
70198BpQTLcluster9Blood pressure QTL cluster 92.94arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)104232313287323132Rat
12880371Cm106Cardiac mass QTL 1060.007heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)106631944768164786Rat
11565453Kidm58Kidney mass QTL 580.002kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)106631944767750281Rat
6893352Bw100Body weight QTL 1000.330.6body mass (VT:0001259)body weight (CMO:0000012)11590666560906665Rat
724556Pur2Proteinuria QTL 25.5urine protein amount (VT:0005160)urine protein level (CMO:0000591)102242750090627625Rat
1354585Eae18aExperimental allergic encephalomyelitis QTL 18a7.50.0004nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis severity score (CMO:0001419)105379738558445852Rat
70223Bp57Blood pressure QTL 575arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)10180676123Rat
1354587Kidm21Kidney mass QTL 213.3kidney mass (VT:0002707)right kidney wet weight (CMO:0000082)101502851360430477Rat
6893350Bw99Body weight QTL 990.870.16body mass (VT:0001259)body weight (CMO:0000012)11590666560906665Rat
70224Eae3Experimental allergic encephalomyelitis QTL 34.1nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)102652195761345413Rat
2298481Eau9Experimental allergic uveoretinitis QTL 90.0169uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)106592723382565079Rat
1331791Cm31Cardiac mass QTL 313.84606heart mass (VT:0007028)heart wet weight (CMO:0000069)1029299504107211142Rat
2313087Bmd80Bone mineral density QTL 803.20.0001tibia mineral mass (VT:1000283)total volumetric bone mineral density (CMO:0001728)101960648364606483Rat
2298495Eae23Experimental allergic encephalomyelitis QTL 2316.93nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis duration (CMO:0001424)105527369660677262Rat
1354608Cm33Cardiac mass QTL 332.8heart left ventricle mass (VT:0007031)heart left ventricle wet weight (CMO:0000071)105480929299809292Rat
1558643Cm44Cardiac mass QTL 444.80.0000368heart mass (VT:0007028)heart wet weight (CMO:0000069)106134527699703528Rat
1576319Cia29Collagen induced arthritis QTL 29joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)103397392178973921Rat
1331839Eae18bExperimental allergic encephalomyelitis QTL 18b5.80.03nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis severity score (CMO:0001419)106124830367785171Rat
1576308Schws1Schwannoma susceptibility QTL 10.0041nervous system integrity trait (VT:0010566)percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)1040035094102359817Rat
631652Bp106Blood pressure QTL 106arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)105432493354332939Rat
9590268Scort13Serum corticosterone level QTL 133.260.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)101147401056474010Rat
1576311Pia26Pristane induced arthritis QTL 26joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)103122402675632053Rat
6893336Cm75Cardiac mass QTL 750.10.87heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)106134527699703528Rat
6893342Cm78Cardiac mass QTL 780.10.88heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)104287676679813922Rat
2313055Bw96Body weight QTL 963.60.0001body mass (VT:0001259)body weight (CMO:0000012)101960648364606483Rat
152025229Scl83Serum cholesterol level QTL 834.33blood cholesterol amount (VT:0000180)103571058068663659Rat
152025227Bw195Body weight QTL 1955.73body mass (VT:0001259)104698969968663659Rat
1298069Bp168Blood pressure QTL 1685.5blood pressure trait (VT:0000183)systolic blood pressure (CMO:0000004)102652195798003205Rat
8657410Bp374Blood pressure QTL 374heart left ventricle size trait (VT:0002753)heart left ventricle end-diastolic diameter (CMO:0000982)106697895567750281Rat
2293669Bmd33Bone mineral density QTL 334.50.0001femur strength trait (VT:0010010)femoral neck polar moment of inertia (CMO:0001670)104944455181709989Rat
152025224Bw193Body weight QTL 1936.47body mass (VT:0001259)105166340575085664Rat
61325Aia5Adjuvant induced arthritis QTL 50.01joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1023444813104060283Rat
1298078Stresp5Stress response QTL 52.990.00025blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)1042045676104670812Rat
2293679Bmd30Bone mineral density QTL 303.50.0001femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)104944455181709989Rat
12903252Cm113Cardiac mass QTL 1130.047heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)106631944767750281Rat
2298544Neuinf9Neuroinflammation QTL 94.6nervous system integrity trait (VT:0010566)spinal cord complement component 1, q subcomponent, B chain mRNA level (CMO:0002126)10580199062146030Rat
1554317Bmd4Bone mineral density QTL 49.40.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)101981604299406971Rat
1598852Anxrr19Anxiety related response QTL 195.07body movement coordination trait (VT:0005424)number of rearing movements in an experimental apparatus (CMO:0001752)101816784163167841Rat
1581497Esta1Estrogen-induced thymic atrophy QTL 1thymus mass (VT:0004954)thymus wet weight (CMO:0000855)102132980561345413Rat
12903269Am15Aortic mass QTL 150.042aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)106631944767750281Rat
12903266Cm114Cardiac mass QTL 1140.02heart right ventricle mass (VT:0007033)heart right ventricle weight to body weight ratio (CMO:0000914)106631944767750281Rat
61354Pia10Pristane induced arthritis QTL 100.01joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1023444813104060283Rat
2313103Bss80Bone structure and strength QTL 8020.0001tibia strength trait (VT:1000284)tibia midshaft endosteal cross-sectional area (CMO:0001716)1062057807107057807Rat
2303118Mamtr7Mammary tumor resistance QTL 70.003mammary gland integrity trait (VT:0010552)mammary tumor growth rate (CMO:0000344)109658275104670812Rat
2313105Bss79Bone structure and strength QTL 791.80.0001tibia size trait (VT:0100001)tibia midshaft cross-sectional area (CMO:0001717)1062057807107057807Rat
9590310Scort19Serum corticosterone level QTL 196.30.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)101147401056474010Rat
9589030Epfw9Epididymal fat weight QTL 919.240.001epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)104444169989441699Rat
10402859Bp381Blood pressure QTL 3810.002arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)102760646872606468Rat
2316949Gluco60Glucose level QTL 603.7blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)1014487011107057807Rat
2293652Bmd22Bone mineral density QTL 224.90.0001femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)104944455181709989Rat
2306970Anxrr22Anxiety related response QTL 225.95fear/anxiety-related behavior trait (VT:1000241)number of periods of voluntary immobility (CMO:0001045)106134527698211570Rat
1359017Hrtrt21Heart rate QTL 212.4heart pumping trait (VT:2000009)heart rate (CMO:0000002)105177294096772940Rat
2306787Ean3Experimental allergic neuritis QTL 33.1nervous system integrity trait (VT:0010566)body weight loss (CMO:0001399)105379738566979128Rat
7387312Bw125Body weight QTL 12530.0047retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight (CMO:0000356)1064890616107211142Rat
2312672Insul15Insulin level QTL 150.01blood insulin amount (VT:0001560)serum insulin level (CMO:0000358)1057134272102134272Rat
2317029Aia19Adjuvant induced arthritis QTL 192.98joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)1066978955107211142Rat
8662860Vetf10Vascular elastic tissue fragility QTL 10artery integrity trait (VT:0010639)number of ruptures of the internal elastic lamina of the abdominal aorta and iliac arteries (CMO:0002562)10615418273453136Rat
61387Bp1Blood pressure QTL 15.1arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)1051770177107211142Rat
2317039Aia6Adjuvant induced arthritis QTL 64.31joint integrity trait (VT:0010548)right rear ankle joint diameter (CMO:0002150)1066978955107211142Rat
2317043Aia7Adjuvant induced arthritis QTL 73.82joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)103756507982565079Rat
2317042Aia20Adjuvant induced arthritis QTL 203.38joint integrity trait (VT:0010548)right rear ankle joint diameter (CMO:0002150)103756507982565079Rat
70363Bp71Blood pressure QTL 710.04arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)106134527681714865Rat
61402Niddm3Non-insulin dependent diabetes mellitus QTL 34.58blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)106134541382564856Rat
70364Bp72Blood pressure QTL 72arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)105112110096121100Rat
2293698Bss43Bone structure and strength QTL 435.330.0001lumbar vertebra size trait (VT:0010518)lumbar vertebra cross-sectional area (CMO:0001689)1059209888104209888Rat
631530Tls3T-lymphoma susceptibility QTL 300.0001thymus integrity trait (VT:0010555)percentage of study population developing T-cell lymphomas during a period of time (CMO:0001911)105177461295600334Rat
631535Cm51Cardiac mass QTL 513heart mass (VT:0007028)calculated heart weight (CMO:0000073)105178628291669536Rat
8552805Bw145Body weight QTL 1452.2body mass (VT:0001259)change in body weight to body weight ratio (CMO:0002216)104194452678307017Rat
631267Cia20Collagen induced arthritis QTL 203.2joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1023444813104060283Rat
2293705Bmd25Bone mineral density QTL 257.10.0001femur mineral mass (VT:0010011)compact volumetric bone mineral density (CMO:0001730)104944455181709989Rat
631269Cia22Collagen induced arthritis QTL 228.9joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1040035094104060283Rat
631268Cia21Collagen induced arthritis QTL 213.1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1014487011104060283Rat
7207811Bmd90Bone mineral density QTL 905.2femur size trait (VT:1000369)femoral neck cross-sectional area (CMO:0001697)104944455181709989Rat
631270Cia23Collagen induced arthritis QTL 233.9joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1040035094104060283Rat
7411614Foco18Food consumption QTL 180.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)104444169989441699Rat
631526Bp76Blood pressure QTL 760.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)106134541366743655Rat
631547Bp87Blood pressure QTL 874.5arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)104736947092369470Rat
61427Cia16Collagen induced arthritis QTL 163.2joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)10635789696121100Rat
2312662Slep8Serum leptin concentration QTL 80.05blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)1057134272102134272Rat
2292441Bp308Blood pressure QTL 308arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)102760646872606468Rat
2301405Cm69Cardiac mass QTL 690.031heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)106631944767750281Rat
631542Bp82Blood pressure QTL 826.8arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)102652195798952741Rat
2312668Scl65Serum cholesterol level QTL 650.001blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)1057134272102134272Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_cross_type intercross  
qtl_disease animals treated with agonist NADPH oxidase complex for Ncf1 gene showed dramatic reduction in disease score 2306769
qtl_general region shows linkage to weight loss 2306769
qtl_general measurement method: rats were anesthetized by ether inhalation then bPNM (bovine peripheral nerve myelin) dissolved in PBS was injected at the base of the tail then scored: 0, normal; 1, less active; 2, limp tail; 3, absent righting; 4, gait ataxia; 5, mild paresis; 6, moderate paresis; 7, severe paraparesis; 8, tetraparesis; 9, moribund; 10, death; body weight was taken every second day 2306769
qtl_general inducing agent: bPNM (bovine peripheral nerve myelin) 2306769
qtl_general number of animals used: 215 males and 235 females; 8-14 weeks old 2306769